mRNA_H-akashiwo_Contig1204.2.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1204.2.1 vs. uniprot
Match: A0A6U1PGH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PGH0_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 6.170e-14 Identity = 34/56 (60.71%), Postives = 45/56 (80.36%), Query Frame = 1
Query: 1 VTSRDTVKHRVIETELGVVSAGHVASKSLLQDIMASLKGMIGGETHAYSDLMNVAS 168
VTSRD+VKHR IE E+G VSAG V S+S+L D+ +++KG GGE+H YSDL++ AS
Sbjct: 58 VTSRDSVKHRRIEEEIGFVSAGVVQSRSILHDVASAIKGFFGGESHHYSDLLDQAS 113
BLAST of mRNA_H-akashiwo_Contig1204.2.1 vs. uniprot
Match: A0A397DM25_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DM25_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 3.690e-10 Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 1
Query: 1 VTSRDTVKHRVIETELGVVSAGHVASKSLLQDIMASLKGMIGGETHAYSDLMN 159
V++RD V+ R I ELGVVSA V +K++L+DI+A+L GM GGET +YS LMN
Sbjct: 42 VSTRDCVEGRQIVKELGVVSATVVRTKNILEDILAALGGMFGGETRSYSSLMN 94
BLAST of mRNA_H-akashiwo_Contig1204.2.1 vs. uniprot
Match: A0A3R6Z2M4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z2M4_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 6.580e-10 Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 1
Query: 1 VTSRDTVKHRVIETELGVVSAGHVASKSLLQDIMASLKGMIGGETHAYSDLMN 159
V++RD V+ R I ELGVVSA V +K++L+DI+A+L GM GGET +YS LMN
Sbjct: 23 VSTRDCVEGREIIEELGVVSATVVRTKNILEDILAALGGMFGGETRSYSSLMN 75
BLAST of mRNA_H-akashiwo_Contig1204.2.1 vs. uniprot
Match: A0A418C8H5_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418C8H5_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 4.010e-9 Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 1
Query: 1 VTSRDTVKHRVIETELGVVSAGHVASKSLLQDIMASLKGMIGGETHAYSDLMN 159
V++RD V+ R I ELGVVSA V +K++L+DI+A+L GM GGET +YS LMN
Sbjct: 898 VSTRDCVEGRQIVKELGVVSATVVRTKNILEDILAALGGMFGGETRSYSSLMN 950
BLAST of mRNA_H-akashiwo_Contig1204.2.1 vs. uniprot
Match: A0A485KNN4_9STRA (Aste57867_9624 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNN4_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.050e-7 Identity = 23/52 (44.23%), Postives = 40/52 (76.92%), Query Frame = 1
Query: 4 TSRDTVKHRVIETELGVVSAGHVASKSLLQDIMASLKGMIGGETHAYSDLMN 159
++RD V+ R + E+G+V+A HV +K++L+DI+A+ G +GGET +Y+ L+N
Sbjct: 68 STRDWVEGREVIKEIGIVTASHVRTKNILEDIIAAFGGAMGGETRSYTSLLN 119
BLAST of mRNA_H-akashiwo_Contig1204.2.1 vs. uniprot
Match: K3WKP2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKP2_GLOUD) HSP 1 Score: 54.3 bits (129), Expect = 5.900e-7 Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 4 TSRDTVKHRVIETELGVVSAGHVASKSLLQDIMASLKGMIGGETHAYSDLMN 159
T+RD + R + E+G+VSA V SKS+ D+ +L G+IGGE H+Y+ LMN
Sbjct: 413 TTRDHINGRQVVEEIGMVSAAAVRSKSVFSDMYVALAGLIGGEAHSYTALMN 464
BLAST of mRNA_H-akashiwo_Contig1204.2.1 vs. uniprot
Match: A0A3R7XY82_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7XY82_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 8.120e-7 Identity = 26/48 (54.17%), Postives = 37/48 (77.08%), Query Frame = 1
Query: 1 VTSRDTVKHRVIETELGVVSAGHVASKSLLQDIMASLKGMIGGETHAY 144
V++RD V+ R I ELGVVSA V +K++L+DI+A+L GM GGET ++
Sbjct: 42 VSTRDCVEGRQIVKELGVVSATVVRTKNILEDILAALGGMFGGETRSH 89
BLAST of mRNA_H-akashiwo_Contig1204.2.1 vs. uniprot
Match: A0A5P9CPZ9_9VIBR (UPF0145 protein FIV01_17910 n=5 Tax=Vibrio TaxID=662 RepID=A0A5P9CPZ9_9VIBR) HSP 1 Score: 51.2 bits (121), Expect = 1.010e-6 Identity = 24/54 (44.44%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 4 TSRDTVKHRVIETELGVVSAGHVASKSLLQDIMASLKGMIGGETHAYSDLMNVA 165
T+ +T+ R IET LG+V+ V SK + +DIMA LKG++GGE Y++++ A
Sbjct: 4 TTTETIPGREIETVLGIVNGNIVQSKHVGRDIMAGLKGIVGGELKGYTEMLTEA 57
BLAST of mRNA_H-akashiwo_Contig1204.2.1 vs. uniprot
Match: C9P4P3_VIBME (UPF0145 protein VIB_001261 n=7 Tax=Vibrio TaxID=662 RepID=C9P4P3_VIBME) HSP 1 Score: 50.4 bits (119), Expect = 1.970e-6 Identity = 27/56 (48.21%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 4 TSRDTVKHRVIETELGVVSAGHVASKSLLQDIMASLKGMIGGETHAYSDLMNVASG 171
T+ +T+ R I LGVV V SK + +DIMA+LKG+IGGE H Y++L+ A G
Sbjct: 4 TTTETIPGREIVDILGVVMGNVVQSKHVGRDIMANLKGIIGGELHGYTELLIEARG 59
BLAST of mRNA_H-akashiwo_Contig1204.2.1 vs. uniprot
Match: UPI001EFD5676 (heavy metal-binding domain-containing protein n=1 Tax=Vibrio sp. Isolate30 TaxID=2908536 RepID=UPI001EFD5676) HSP 1 Score: 50.1 bits (118), Expect = 2.790e-6 Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 4 TSRDTVKHRVIETELGVVSAGHVASKSLLQDIMASLKGMIGGETHAYSDLMNVA 165
T+ +TV R IE LGVV+ V SK + +DIMA LKG++GGE Y++++ A
Sbjct: 4 TTTETVPGREIEAVLGVVNGNVVQSKHVGRDIMAGLKGIVGGELKGYTEMLTEA 57 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1204.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1204.2.1 >prot_H-akashiwo_Contig1204.2.1 ID=prot_H-akashiwo_Contig1204.2.1|Name=mRNA_H-akashiwo_Contig1204.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=64bp VTSRDTVKHRVIETELGVVSAGHVASKSLLQDIMASLKGMIGGETHAYSDback to top mRNA from alignment at H-akashiwo_Contig1204:61613..62080+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1204.2.1 ID=mRNA_H-akashiwo_Contig1204.2.1|Name=mRNA_H-akashiwo_Contig1204.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=468bp|location=Sequence derived from alignment at H-akashiwo_Contig1204:61613..62080+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1204:61613..62080+ >mRNA_H-akashiwo_Contig1204.2.1 ID=mRNA_H-akashiwo_Contig1204.2.1|Name=mRNA_H-akashiwo_Contig1204.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=192bp|location=Sequence derived from alignment at H-akashiwo_Contig1204:61613..62080+ (Heterosigma akashiwo CCMP452)back to top |