mRNA_H-akashiwo_Contig1202.8.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1202.8.1 vs. uniprot
Match: A0A7S3UMN9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UMN9_HETAK) HSP 1 Score: 178 bits (451), Expect = 1.100e-54 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1
Query: 1 SKQISRLQGKIKLKLSDLLKVQCDDVLAEYVLVMVGNHKKMKEIAASLDELVGKDVAKEFSCWLGNALHDFLRQGDKDEGKKEGGLVKRK 270
SKQISRLQGKIKLKLSDLLKVQCDDVLAEYVLVMVGNHKKMKEIAASLDELVGKDVAKEFSCWLGNALHDFLRQGDKDEGKKEGGLVKRK
Sbjct: 21 SKQISRLQGKIKLKLSDLLKVQCDDVLAEYVLVMVGNHKKMKEIAASLDELVGKDVAKEFSCWLGNALHDFLRQGDKDEGKKEGGLVKRK 110
BLAST of mRNA_H-akashiwo_Contig1202.8.1 vs. uniprot
Match: F0WEY3_9STRA (Uncharacterized protein AlNc14C78G5181 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WEY3_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.140e-11 Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 16 RLQGKIKLKLSDLLKVQCDDVLAEYVLVMVGNHKKMKEIAASLDELVGKDVAKEFSCWLGNALHDFLRQGDKDEGKKE 249
++Q K KL++++ V+ D+V+AEYVLVMVGN K M +IA L + +G + A EF WL AL F D DE K+
Sbjct: 20 QIQQKAIAKLTEIIGVEVDNVMAEYVLVMVGNKKSMTQIAHDLIDFIGDEAANEFVTWLSAALPTFEASADSDEKSKD 97
BLAST of mRNA_H-akashiwo_Contig1202.8.1 vs. uniprot
Match: A0A3R7W6Q2_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7W6Q2_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.590e-10 Identity = 30/69 (43.48%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 19 LQGKIKLKLSDLLKVQCDDVLAEYVLVMVGNHKKMKEIAASLDELVGKDVAKEFSCWLGNALHDFLRQG 225
+ K + KL+++L V+ D+V+AEYV+VMVGN K M++IA L + +G++ A++F WL N L F +G
Sbjct: 22 ITSKTREKLTEMLGVEVDNVMAEYVIVMVGNKKNMEQIAHDLVDFIGEESAEQFVTWLSNLLPTFEAKG 90
BLAST of mRNA_H-akashiwo_Contig1202.8.1 vs. uniprot
Match: A0A5D6XUS6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUS6_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.210e-9 Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 19 LQGKIKLKLSDLLKVQCDDVLAEYVLVMVGNHKKMKEIAASLDELVGKDVAKEFSCWLGNALHDFLRQGDKD 234
LQ + + +LS++L V+ D V+AEYVLVMVGN K M +IA L + +G + A++F WL L + QG D
Sbjct: 20 LQRRTQTRLSEMLGVEVDTVMAEYVLVMVGNKKSMAQIAHDLIDFIGDESAEQFVQWLSGVLPTYEAQGAGD 91
BLAST of mRNA_H-akashiwo_Contig1202.8.1 vs. uniprot
Match: G4ZW79_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZW79_PHYSP) HSP 1 Score: 63.2 bits (152), Expect = 1.230e-9 Identity = 29/66 (43.94%), Postives = 46/66 (69.70%), Query Frame = 1
Query: 40 KLSDLLKVQCDDVLAEYVLVMVGNHKKMKEIAASLDELVGKDVAKEFSCWLGNALHDFLRQGDKDE 237
KL+++L V+ D+V+AEYV+VMVGN K M++IA L + +G++ A++F+ WL L F Q +E
Sbjct: 29 KLTEMLGVEVDNVMAEYVIVMVGNKKNMEQIAHDLVDFIGEESAEQFAAWLSLLLPTFEAQAQAEE 94
BLAST of mRNA_H-akashiwo_Contig1202.8.1 vs. uniprot
Match: A0A225WMQ3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WMQ3_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.680e-9 Identity = 29/69 (42.03%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 28 KIKLKLSDLLKVQCDDVLAEYVLVMVGNHKKMKEIAASLDELVGKDVAKEFSCWLGNALHDFLRQGDKD 234
K + KL+++L V+ D+V+AEYV+VMVGN K M++IA L + +G + A++F+ WL L F Q ++
Sbjct: 24 KTREKLTEMLGVEVDNVMAEYVIVMVGNKKNMEQIAHDLVDFIGDESAEQFAAWLSQLLPTFETQAQEE 92
BLAST of mRNA_H-akashiwo_Contig1202.8.1 vs. uniprot
Match: D0NJQ8_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NJQ8_PHYIT) HSP 1 Score: 61.6 bits (148), Expect = 4.270e-9 Identity = 29/68 (42.65%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 19 LQGKIKLKLSDLLKVQCDDVLAEYVLVMVGNHKKMKEIAASLDELVGKDVAKEFSCWLGNALHDFLRQ 222
+ K + KL+++L V+ D+V+AEYV+VMVGN K M++IA L + +G + A++F WL L F Q
Sbjct: 22 ISSKTREKLTEMLGVEVDNVMAEYVIVMVGNKKNMEQIAHDLVDFIGDESAEQFVTWLSQLLPTFEAQ 89
BLAST of mRNA_H-akashiwo_Contig1202.8.1 vs. uniprot
Match: A0A024GF22_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GF22_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 4.270e-9 Identity = 30/66 (45.45%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 16 RLQGKIKLKLSDLLKVQCDDVLAEYVLVMVGNHKKMKEIAASLDELVGKDVAKEFSCWLGNALHDF 213
++Q K KL++++ V+ D+V+AEYVLVMV N K M +IA L + +G + A EF WL AL F
Sbjct: 20 QIQEKAITKLTEIIGVEVDNVMAEYVLVMVANKKSMTQIAHDLIDFIGDEAANEFVTWLSTALPTF 85
BLAST of mRNA_H-akashiwo_Contig1202.8.1 vs. uniprot
Match: W2Q5Q4_PHYPN (Uncharacterized protein n=19 Tax=Phytophthora TaxID=4783 RepID=W2Q5Q4_PHYPN) HSP 1 Score: 61.2 bits (147), Expect = 5.840e-9 Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 19 LQGKIKLKLSDLLKVQCDDVLAEYVLVMVGNHKKMKEIAASLDELVGKDVAKEFSCWLGNALHDF 213
+ K + KL+++L V+ D+V+AEYV+VMVGN K M++IA L + +G + A++F WL L F
Sbjct: 22 ISSKTREKLTEMLGVEVDNVMAEYVIVMVGNKKNMEQIAHDLVDFIGDESAEQFVAWLSQLLPTF 86
BLAST of mRNA_H-akashiwo_Contig1202.8.1 vs. uniprot
Match: A0A6A3EED1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EED1_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 5.860e-9 Identity = 29/69 (42.03%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 16 RLQGKIKLKLSDLLKVQCDDVLAEYVLVMVGNHKKMKEIAASLDELVGKDVAKEFSCWLGNALHDFLRQ 222
++ K + KL+++L V+ D+V+AEYV+VMVGN K M++IA L + +G++ A +F+ WL L F Q
Sbjct: 21 QITTKTREKLTEMLGVEVDNVMAEYVIVMVGNKKNMEQIAHDLVDFIGEESADQFAAWLSLLLPTFEAQ 89 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1202.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1202.8.1 >prot_H-akashiwo_Contig1202.8.1 ID=prot_H-akashiwo_Contig1202.8.1|Name=mRNA_H-akashiwo_Contig1202.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=90bp SKQISRLQGKIKLKLSDLLKVQCDDVLAEYVLVMVGNHKKMKEIAASLDEback to top mRNA from alignment at H-akashiwo_Contig1202:205685..211776+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1202.8.1 ID=mRNA_H-akashiwo_Contig1202.8.1|Name=mRNA_H-akashiwo_Contig1202.8.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=6092bp|location=Sequence derived from alignment at H-akashiwo_Contig1202:205685..211776+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1202:205685..211776+ >mRNA_H-akashiwo_Contig1202.8.1 ID=mRNA_H-akashiwo_Contig1202.8.1|Name=mRNA_H-akashiwo_Contig1202.8.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=270bp|location=Sequence derived from alignment at H-akashiwo_Contig1202:205685..211776+ (Heterosigma akashiwo CCMP452)back to top |