mRNA_H-akashiwo_Contig1202.5.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1202.5.1 vs. uniprot
Match: A0A7S3XZR8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZR8_HETAK) HSP 1 Score: 213 bits (542), Expect = 4.240e-60 Identity = 125/232 (53.88%), Postives = 173/232 (74.57%), Query Frame = 1
Query: 4 FMVGVILAAGVLVGLATRFENAA-LAALDNVILGIFVVELVAKLSSDEERPLRFFKDSWNVFDFVVVAGSIIPMLLRLDFAGIISMLRXXXXXXXXXXXXTLPRLKILVDALMDGFGSMSYLCVLMFLVFFLFAVVGMMMFETNDPWHYGTLNSAMLSLFRISTLEDWTDIMFINQYGCDVYGWQVYPALSSCSPRAMGYWSVLYHVVFVILSSMVLVTTFLGVVITSMFKA 696
FMV VIL AGVLVGL+T E++A + A D ++L IF E+V KL + RPLR+F+DSWN FDF +V S +PM+ D +ISML XXXXXXXXXXXX LP+L+++V+AL++GF S++++ +++ L F++FA+VGM++F+ NDPWH+G L AML+LFR +TLEDWTD+M+IN +GC YG+ L S +G+ + LY VVFV+L ++VL+T FLGVV TSM KA
Sbjct: 401 FMVLVILTAGVLVGLSTEIEDSAGMDAADGIVLAIFTAEVVIKLVACGRRPLRYFRDSWNRFDFFIVLSSYVPMMFGGDLGPLISMLXXXXXXXXXXXXXXLPQLRVIVEALIEGFNSITFITLILLLFFYVFAIVGMILFKANDPWHFGLLQDAMLTLFRCATLEDWTDVMYINMFGCANYGYGGMEELCDTS-YGLGWLAALYFVVFVVLGALVLLTLFLGVVTTSMEKA 631
BLAST of mRNA_H-akashiwo_Contig1202.5.1 vs. uniprot
Match: A0A5Q4FNB0_9BACT (Ion transporter (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A5Q4FNB0_9BACT) HSP 1 Score: 183 bits (464), Expect = 3.000e-53 Identity = 98/239 (41.00%), Postives = 152/239 (63.60%), Query Frame = 1
Query: 4 FMVGVILAAGVLVGLATRFENAA-----LAALDNVILGIFVVELVAKLSSDEERPLRFFKDSWNVFDFVVVAGSIIPMLLRLDFAGIISMLRXXXXXXXXXXXXTLPRLKILVDALMDGFGSMSYLCVLMFLVFFLFAVVGMMMFETNDPWHYGTLNSAMLSLFRISTLEDWTDIMFINQYGCDVYGWQVYPALSSCSPRAMGYWSVLYHVVFVILSSMVLVTTFLGVVITSMFKAYRE 705
F++ VIL AGV+VG+ T E A L ALD +IL IF+VE++ K++++ RPLR+F+D WNVFDF +VA + +L +++ R T+P+L++LV+ L+ S+ Y+ +L+ +VF+++A +G+ +F NDP H+G L ++LSLFRI TLEDWTDIM+IN YGCD W A P MG+ + LY V FV++ +M+++ F+GV++ SM +A R+
Sbjct: 20 FIMAVILGAGVVVGIQTYGEQVAHMKELLWALDQIILFIFLVEVIIKMAAEGNRPLRYFRDPWNVFDFSIVAVCYLALLFPEVEGAYVAVFRLARVLRVFRIVRTVPKLRLLVNTLLKSIPSIGYIGILLSVVFYIYATMGVFLFRDNDPVHFGNLQLSLLSLFRIVTLEDWTDIMYINMYGCDHSIWGYGMAEGCTDPHPMGFGAALYFVTFVLVGTMIVLNLFIGVIMNSMDEAKRD 258
BLAST of mRNA_H-akashiwo_Contig1202.5.1 vs. uniprot
Match: A0A350ATC5_9BACT (Potassium transporter n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A350ATC5_9BACT) HSP 1 Score: 180 bits (457), Expect = 4.080e-52 Identity = 107/240 (44.58%), Postives = 162/240 (67.50%), Query Frame = 1
Query: 4 FMVGVILAAGVLVGLAT-----RFENAALAALDNVILGIFVVELVAKLSSDEERPLRFFKDSWNVFDFVVVAGSIIPMLLRLDFAGIISMLRXXXXXXXXXXXXTLPRLKILVDALMDGFGSMSYLCVLMFLVFFLFAVVGMMMFETNDPWHYGTLNSAMLSLFRISTLEDWTDIMFINQYGCDVY-GWQVYPALSSCSPRAMGYWSVLYHVVFVILSSMVLVTTFLGVVITSMFKAYRE 705
F++GVI+ AG+LVG+ T L LD+++LGIF +E++ K+++++ RP R+FKD WN+FDF +VA +P+ G +++LR XXXXXXXX +P+L++LV AL+ SM Y+C+L+FL+F+++AV+G+M+F NDP H+G L S+ LSLFRI TLEDWTD+M++ YG DVY G+ A +P+AM LY V FV + +M+++ +GV+I M +A RE
Sbjct: 27 FIIGVIVFAGILVGVETFPAIVERHGKLLHFLDDLVLGIFTIEVILKMAAEKTRPWRYFKDGWNIFDFTIVAVCFLPL-----GGGYVAVLRLFRLXXXXXXXXXIPKLQLLVTALLRSLPSMFYVCLLLFLLFYVYAVIGVMLFSGNDPIHFGDLWSSFLSLFRIVTLEDWTDVMYLQIYGSDVYDGYNQSLAGLEVTPKAMPIIGALYFVSFVTIGTMIMLNLVIGVIINGMDEAQRE 261
BLAST of mRNA_H-akashiwo_Contig1202.5.1 vs. uniprot
Match: A0A7S1TYM8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYM8_9STRA) HSP 1 Score: 190 bits (483), Expect = 8.280e-52 Identity = 117/241 (48.55%), Postives = 167/241 (69.29%), Query Frame = 1
Query: 4 FMVGVILAAGVLVGLAT-----RFENAALAALDNVILGIFVVELVAKLSSDEERPLRFFKDSWNVFDFVVVAGSIIPMLLRLDFAGIISMLRXXXXXXXXXXXXTLPRLKILVDALMDGFGSMSYLCVLMFLVFFLFAVVGMMMFETNDPWHYGTLNSAMLSLFRISTLEDWTDIMFINQYGCDVYGWQVYPALSSCSPRAMGYWSVLYHVVFVILSSMVLVTTFLGVVITSMFKAYREQE 711
F+ GVI+ AG+L G+AT + L A+D ILGIFVVE K+ ++E P R F+ SWN FDFVV+ G +P + G +++LR XXXXXXXXXXX LP+L+++V AL+ GF S++Y+ +++F+ F+ F ++GM++F+ NDPWH+GTL+ A+LSLFR STLEDWTD+M+IN YGCD Y YP P +V+Y +VF+I+ ++VL+T F+GVV TSM +A +QE
Sbjct: 436 FITGVIVLAGMLAGVATYETVQKNAGDVLDAIDWGILGIFVVEFALKVVAEEFEPWRVFRSSWNKFDFVVIVGCALPESMT---GGFVNVLRLXXXXXXXXXXXXLPQLQVIVTALIMGFQSITYIGIILFMFFYFFGIIGMLLFQENDPWHFGTLDRALLSLFRCSTLEDWTDVMYINIYGCDHY--DGYPG-ECTDPNPNPGLAVMYFLVFIIIGALVLLTLFIGVVTTSMEEAQAKQE 670
BLAST of mRNA_H-akashiwo_Contig1202.5.1 vs. uniprot
Match: A0A2S9XQG2_9DELT (Ion transport protein n=2 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9XQG2_9DELT) HSP 1 Score: 177 bits (450), Expect = 3.660e-51 Identity = 119/250 (47.60%), Postives = 164/250 (65.60%), Query Frame = 1
Query: 16 VILAAGVLVGLAT------RFENAALAALDNVILGIFVVELVAKLSSDEERPLRFFKDSWNVFDFVVVAGSIIPMLLRLDFAG-IISMLRXXXXXXXXXXXXTLPRLKILVDALMDGFGSMSYLCVLMFLVFFLFAVVGMMMFETNDPWHYGTLNSAMLSLFRISTLEDWTDIMFINQYGCDVYGWQVYPALSSCSPRAMGYWSVLYHVVFVILSSMVLVTTFLGVVITSMFKAYREQEILTELNRQAQE 744
VIL AGVLVGL T RF +A L D +IL IFV E+V K++++ +RP R+F D WNVFDF++VA +P F G +++LR XXXXXXXXXXX LP+L+ILV AL+ SM Y+ VL+F++F+++AV + +F NDP H+ TL AMLSLFR+ TLEDWTD+M+IN YGCD YG+ + SP A L+ V FV++ +M+++ F+GV+++ M +A E EL R A E
Sbjct: 21 VILLAGVLVGLETYPGLVERFHSA-LHIGDQIILWIFVAEIVVKMAAEGKRPWRYFLDPWNVFDFIIVAACFLP------FEGNAVTVLRLXXXXXXXXXXXALPKLQILVGALLKSIPSMLYVSVLLFMLFYVYAVAAVFLFGENDPLHFQTLEMAMLSLFRVVTLEDWTDVMYINMYGCDRYGYSADSVVLCTSPVAQPLVGALFFVSFVLIGTMIILNLFIGVIMSGMDEAQSEA---VELARAAHE 260
BLAST of mRNA_H-akashiwo_Contig1202.5.1 vs. uniprot
Match: A0A6N2D0U5_9DELT (Ion transporter n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A6N2D0U5_9DELT) HSP 1 Score: 178 bits (451), Expect = 4.350e-51 Identity = 113/242 (46.69%), Postives = 158/242 (65.29%), Query Frame = 1
Query: 4 FMVGVILAAGVLVGLAT-----RFENAALAALDNVILGIFVVELVAKLSSDEERPLRFFKDSWNVFDFVVVAGSIIPMLLRLDFAGIISMLRXXXXXXXXXXXXTLPRLKILVDALMDGFGSMSYLCVLMFLVFFLFAVVGMMMFETNDPWHYGTLNSAMLSLFRISTLEDWTDIMFINQYGCDVYGWQVYPALSSCSPRAMGYWSVLYHVVFVILSSMVLVTTFLGVVITSMFKAYREQEI 714
F++GVIL AGV+VGL T L LD VILGIFV E+ K+ + RP R+F D WNVFDFV+V +P L++ +LR XXXXXXXXXXX +PRL+ILV+AL+ SM Y+ +L+ LVF+++AV +F TNDP+H+G L ++LSLFR TLEDWTD+M+I YGCD Y L + +P+AM L+ V FV+L +M+++ F+GV++ M +A +E+E+
Sbjct: 17 FIIGVILLAGVVVGLETYPDIVHAHGPLLHTLDAVILGIFVAEIAIKMGAHGRRPWRYFLDPWNVFDFVIVVACFMPFLVQYAM-----VLRMXXXXXXXXXXXAIPRLQILVNALLKSIPSMFYVSILLTLVFYIYAVAATFLFSTNDPFHFGNLQLSLLSLFRAVTLEDWTDLMYIQMYGCDAYPIDGGEHLCT-NPKAMPVVGSLFFVSFVLLGTMIVLNLFIGVIVNGMDEAQKEEEL 252
BLAST of mRNA_H-akashiwo_Contig1202.5.1 vs. uniprot
Match: A0A7S1XQD9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQD9_9STRA) HSP 1 Score: 187 bits (476), Expect = 5.230e-51 Identity = 113/263 (42.97%), Postives = 179/263 (68.06%), Query Frame = 1
Query: 4 FMVGVILAAGVLVGLAT-----RFENAALAALDNVILGIFVVELVAKLSSDEERPLRFFKDSWNVFDFVVVAGSIIPMLLRLDFAGIISMLRXXXXXXXXXXXXTLPRLKILVDALMDGFGSMSYLCVLMFLVFFLFAVVGMMMFETNDPWHYGTLNSAMLSLFRISTLEDWTDIMFINQYGCDVY-------GWQVYPALSSCS-PRAMGYWSVLYHVVFVILSSMVLVTTFLGVVITSMFKAYREQEILTELNRQAQELAT 753
F+ GVI+ AG+L G+AT + L A+D ILGIFVVE K+ ++E P R F+ SWN FDFVV+ G +P + G +++LR XXXXXXXXXXX LP+L+++V AL+ GF S++Y+ +++F+ F+ F ++GM++F+ NDPWH+G L+ A+L+LFR +TLEDWTD+M+IN +GCD Y G + P C+ P+ ++SV++ ++F++L ++VL+T F+GVV TSM +A +++ + ++ +E+ T
Sbjct: 436 FITGVIVLAGMLAGVATYETVQKNAGDVLDAIDWGILGIFVVEFALKVVAEEFEPWRVFRSSWNKFDFVVIVGCALPESMT---GGFVNVLRLXXXXXXXXXXXXLPQLQVIVTALIMGFQSITYIGIILFMFFYFFGIIGMLLFQENDPWHFGYLHWALLTLFRCATLEDWTDVMYINIFGCDQYLDIYGHDGTRSLPWYFDCTNPQKRPFFSVVFFLIFIVLGALVLLTLFVGVVTTSMEEATENMKVVQAVEKRVREIMT 695
BLAST of mRNA_H-akashiwo_Contig1202.5.1 vs. uniprot
Match: A0A8J7S4E4_9BACT (Ion transporter n=1 Tax=Natronogracilivirgula saccharolytica TaxID=2812953 RepID=A0A8J7S4E4_9BACT) HSP 1 Score: 177 bits (449), Expect = 8.660e-51 Identity = 93/239 (38.91%), Postives = 150/239 (62.76%), Query Frame = 1
Query: 4 FMVGVILAAGVLVGLATRFENAA-----LAALDNVILGIFVVELVAKLSSDEERPLRFFKDSWNVFDFVVVAGSIIPMLLRLDFAGIISMLRXXXXXXXXXXXXTLPRLKILVDALMDGFGSMSYLCVLMFLVFFLFAVVGMMMFETNDPWHYGTLNSAMLSLFRISTLEDWTDIMFINQYGCDVYGWQVYPALSSCSPRAMGYWSVLYHVVFVILSSMVLVTTFLGVVITSMFKAYRE 705
F++ VILAAGV+VG+ T E A L LD +IL IF+VE++ K+S++ +PLR+F D WNVFDF +V + +L +++ R T+P+L++LV+ L+ S+ Y+ +L+ ++F+++A +G+ +F NDP H+G L ++LSLFR+ TLEDWT+IM+IN YGCD W P+A G+ + LY V FV++ +M+++ F+GV++ SM +A R+
Sbjct: 20 FILIVILAAGVVVGIQTYGEKVADYKELLWTLDQIILFIFLVEVIIKMSAEGNKPLRYFNDPWNVFDFTIVTVCYLALLFPEVEGAFVAVFRLARVMRVFRIVRTIPKLRLLVNTLLKSIPSIGYIGILLSVIFYIYATMGVFLFRENDPVHFGNLQLSLLSLFRVVTLEDWTNIMYINMYGCDHAIWGYGEENGCTDPQAFGFGAALYFVTFVLIGTMIVLNLFIGVIMNSMDEAKRD 258
BLAST of mRNA_H-akashiwo_Contig1202.5.1 vs. uniprot
Match: A0A2E9IM30_9BACT (Potassium transporter n=1 Tax=Puniceicoccaceae bacterium TaxID=2026784 RepID=A0A2E9IM30_9BACT) HSP 1 Score: 175 bits (443), Expect = 3.570e-50 Identity = 105/240 (43.75%), Postives = 162/240 (67.50%), Query Frame = 1
Query: 4 FMVGVILAAGVLVGLAT-----RFENAALAALDNVILGIFVVELVAKLSSDEERPLRFFKDSWNVFDFVVVAGSIIPMLLRLDFAGIISMLRXXXXXXXXXXXXTLPRLKILVDALMDGFGSMSYLCVLMFLVFFLFAVVGMMMFETNDPWHYGTLNSAMLSLFRISTLEDWTDIMFINQYGCDVY-GWQVYPALSSCSPRAMGYWSVLYHVVFVILSSMVLVTTFLGVVITSMFKAYRE 705
F++ VI+ AGVLVG+ T + L LDN++LGIF +E++ K+ +++ +P R+FKD WN+FDF +VA +P+ +++LR XXXXXXXX +P+L++LV AL+ SM Y+C+L+FL+F+++AV+G+M+F NDP H+G L S+ LSLFRI TLEDWTD+M++ YG DVY G+ + + SP+AM +LY V FV + +M+++ +GV+I M +A +E
Sbjct: 14 FIIXVIVFAGVLVGVETFPSVVERHYSLLHFLDNLVLGIFTLEVILKMGAEKRQPWRYFKDGWNIFDFSIVAVCFLPL-----GGSYVAVLRLFRLXXXXXXXXXIPKLQLLVTALLRSLPSMFYVCLLLFLLFYVYAVIGVMLFSGNDPIHFGNLWSSFLSLFRIVTLEDWTDVMYLQMYGSDVYQGYNQDLSGLNFSPKAMPVIGMLYFVSFVTIGTMIMLNLVIGVIINGMDEAQKE 248
BLAST of mRNA_H-akashiwo_Contig1202.5.1 vs. uniprot
Match: A0A850G3S3_9DELT (Ion transporter n=1 Tax=Pseudenhygromyxa sp. WMMC2535 TaxID=2712867 RepID=A0A850G3S3_9DELT) HSP 1 Score: 174 bits (440), Expect = 1.250e-49 Identity = 113/237 (47.68%), Postives = 157/237 (66.24%), Query Frame = 1
Query: 16 VILAAGVLVGLAT------RFENAALAALDNVILGIFVVELVAKLSSDEERPLRFFKDSWNVFDFVVVAGSIIPMLLRLDFAG-IISMLRXXXXXXXXXXXXTLPRLKILVDALMDGFGSMSYLCVLMFLVFFLFAVVGMMMFETNDPWHYGTLNSAMLSLFRISTLEDWTDIMFINQYGCDVYGWQVYPALSSCSPRAMGYWSVLYHVVFVILSSMVLVTTFLGVVITSMFKAYRE 705
VIL AGVLVG+ T RF +A L D +IL IFVVE+V K++++ +P R+F D WNVFDFV+VA +P F G +++LR XXXXXXXXXXX LP+L+ILV AL+ SM Y+ VL+F++F+++AV + +F NDP H+ L AMLSLFR+ TLEDWTD+M+IN YGCD YG+ + SP A L+ V FV+ +M+++ F+GV+++ M +A E
Sbjct: 24 VILLAGVLVGMETYPALVERFHSA-LHLGDQIILWIFVVEIVVKMAAEGRKPWRYFLDPWNVFDFVIVAACFLP------FEGNAVTVLRLXXXXXXXXXXXALPKLQILVGALLKSIPSMVYVSVLLFMLFYVYAVAAVFLFGENDPLHFENLEIAMLSLFRVVTLEDWTDVMYINMYGCDRYGYGPDSVVQCTSPNAQPLLGALFFVSFVLTGTMIILNLFIGVIMSGMDEAQAE 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1202.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1202.5.1 >prot_H-akashiwo_Contig1202.5.1 ID=prot_H-akashiwo_Contig1202.5.1|Name=mRNA_H-akashiwo_Contig1202.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=250bp MVGVILAAGVLVGLATRFENAALAALDNVILGIFVVELVAKLSSDEERPLback to top mRNA from alignment at H-akashiwo_Contig1202:152057..152812+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1202.5.1 ID=mRNA_H-akashiwo_Contig1202.5.1|Name=mRNA_H-akashiwo_Contig1202.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=756bp|location=Sequence derived from alignment at H-akashiwo_Contig1202:152057..152812+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1202:152057..152812+ >mRNA_H-akashiwo_Contig1202.5.1 ID=mRNA_H-akashiwo_Contig1202.5.1|Name=mRNA_H-akashiwo_Contig1202.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=750bp|location=Sequence derived from alignment at H-akashiwo_Contig1202:152057..152812+ (Heterosigma akashiwo CCMP452)back to top |