mRNA_H-akashiwo_Contig120.20.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig120.20.1 vs. uniprot
Match: A0A7S3XYQ3_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYQ3_HETAK) HSP 1 Score: 349 bits (896), Expect = 2.290e-114 Identity = 172/196 (87.76%), Postives = 183/196 (93.37%), Query Frame = 1
Query: 19 SAFIADALADNTMDLWHHRLGHSSERVIRKMAKSGCIPSYRIDLRHRLSFCE-SCASTNMSARGPISAGAREPDSPSLPTRMLEELSIDVAGPYPKDKKGNRYFVLLVDRFTRFKYIGLMKKKSDTFDHFMSFCESASRQNPGVSVNDVVSIRMDGGAQGGEFSRIRDFSAAHGIRVLPTGRGNPNGNALAEISIG 603
SA IADALA+NTMDLWHHRLGHSSERVIRKMAKSGCIP++RI+LR RLSFC SCA+T M A GP+ AR+PDSPSLPTRMLEELSIDVAGPYPKDKKGNRYFVLLVDRFTRFKY+GLMKKKSDTFDHFMSFC SASRQNP VSV+DVVS+RMDGGA+GGEFS IRDFSAAHGIRVLPTGRGNPNGNALAEISIG
Sbjct: 83 SALIADALAENTMDLWHHRLGHSSERVIRKMAKSGCIPAHRINLRDRLSFCHHSCAATGMQAVGPVPTAARQPDSPSLPTRMLEELSIDVAGPYPKDKKGNRYFVLLVDRFTRFKYVGLMKKKSDTFDHFMSFCSSASRQNPDVSVDDVVSVRMDGGARGGEFSGIRDFSAAHGIRVLPTGRGNPNGNALAEISIG 278
BLAST of mRNA_H-akashiwo_Contig120.20.1 vs. uniprot
Match: A0A7S4D959_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D959_HETAK) HSP 1 Score: 347 bits (891), Expect = 4.490e-112 Identity = 170/196 (86.73%), Postives = 183/196 (93.37%), Query Frame = 1
Query: 19 SAFIADALADNTMDLWHHRLGHSSERVIRKMAKSGCIPSYRIDLRHRLSFCE-SCASTNMSARGPISAGAREPDSPSLPTRMLEELSIDVAGPYPKDKKGNRYFVLLVDRFTRFKYIGLMKKKSDTFDHFMSFCESASRQNPGVSVNDVVSIRMDGGAQGGEFSRIRDFSAAHGIRVLPTGRGNPNGNALAEISIG 603
SA +ADA+A+NTMDLWHHRLGHSSERVIRKMAKSGCIP++RI+LR RLSFC SCA+T M A GP+ AR+PDSPSLPTRMLEELSIDVAGPYPKDKKGNRYFVLLVDRFTRFKY+GLMKKKSDTFDHFMSFC SASRQNP VSV+DVVS+RMDGGA+GGEFS IRDFSAAHGIRVLPTGRGNPNGNALAEISIG
Sbjct: 188 SALLADAVAENTMDLWHHRLGHSSERVIRKMAKSGCIPAHRINLRDRLSFCHHSCAATGMQAVGPVPTAARQPDSPSLPTRMLEELSIDVAGPYPKDKKGNRYFVLLVDRFTRFKYVGLMKKKSDTFDHFMSFCSSASRQNPDVSVDDVVSVRMDGGARGGEFSGIRDFSAAHGIRVLPTGRGNPNGNALAEISIG 383
BLAST of mRNA_H-akashiwo_Contig120.20.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 343 bits (880), Expect = 7.750e-111 Identity = 163/205 (79.51%), Postives = 184/205 (89.76%), Query Frame = 1
Query: 1036 RSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLACPQAEPTPVIEDNSACIEWARDMVISRKTRHFHVSYHLAKEQVNLGTIRTHYARTSDQLADIFTKALNAEVF 1650
RSMVGTLAWVANWTRPELAFTVHKLQR Q NPEPKHFEA QRAFRYLKGTQSE LRLGGDLVLRA++D+DFC DR+DGKSVTGY++ LGD+PIVW+SKLQ AVTTSTVEAEYLALRS +KDIMWLR LL ++ CPQ EPTPV+EDNSAC+EWA DM+++++ RHFHVSYHLAKEQV+LGTIR Y +T DQ+ADI TKALNA F
Sbjct: 136 RSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANF 340
BLAST of mRNA_H-akashiwo_Contig120.20.1 vs. uniprot
Match: A0A2I0XCW1_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0XCW1_9ASPA) HSP 1 Score: 203 bits (517), Expect = 2.180e-55 Identity = 148/474 (31.22%), Postives = 225/474 (47.47%), Query Frame = 1
Query: 238 SPSLPTRMLEELSIDVAGPYP-KDKKGNRYFVLLVDRFTRFKYIGLMKKKSDTFDHFMSFCESASRQNPGVSVNDVVSIRMDGGAQGGEF--SRIRDFSAAHGIRVLPTGRGNPNGNALAEISIGKVCYKMRATLHASSLPHSYWSEALHHAVETTNRVPTRALEGSVSPYEKWYGHSPSVHHLRTFGSPCFVYQPLQLRP---GKLLPKGLKHKFLSY-GSSTGVYRLLSPNNTVVMSKHVVFNEKEAVSNSSTTSSPLEVESPSDRKRLRRRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRLGG-DLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLACPQAEPTPVIEDNSACIEWARDMVISRKTRHFHVSYHLAKEQVNLGTIRTHYARTSDQLADIFTKAL 1635
S S + E + DV GP +G RY++ +D F+RF ++ + +KSD F+ Q + +IR +G GE+ + GI + P N +AE + +R+ L S PH W+ L +V N +P+ + +PY+ Y S HL+ FG C+ + LRP KL P FL Y GS G Y + S+HVV NE E L R +VG L ++ TRP +++ V+K+ ++ P HF+A +R R+LKGT L L G L L++Y D+D+ DR+D +S+TGY+ +LG+SPI W+ K +T V ++E EY AL I+WLR LL +L C Q TP+ DN++ I A + + +T+H + H + + TI+ H+ DQLAD+FTK+L
Sbjct: 33 SVSTTVSIFELIHSDVWGPSSCVSIQGYRYYISFIDDFSRFCWVFPLHQKSDVIHKFIELYHWVRCQFN----KSIKTIRTNGD---GEYINHNFQQVCKTWGITHQYSCPYTPAQNGVAEHKNRHIIETIRSLLIQSQAPHELWTHGLLTSVYLINIIPSSKTQNK-TPYQGLYNKLSSYDHLKIFGCLCYPW----LRPYTKSKLSPLSTPCVFLGYVGSQIGYYCFDPNTHKTFTSRHVVLNESEF-------------------PYLLYRQLVGALQYLT-LTRPNISYAVNKVSQHMHYPLESHFDALKRILRFLKGTSDYGLPLSGKSLKLQSYVDSDWVGDRLDRRSMTGYLNLLGNSPISWSLKKKTTVARLSLEVEYRALALAAIKIIWLRQLLQELDCSQRSSTPLHCDNTSAIALANNPIYHARTKHIEIDCHFIRNCIKEQTIQVHHIANKDQLADLFTKSL 474
BLAST of mRNA_H-akashiwo_Contig120.20.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 205 bits (522), Expect = 2.290e-53 Identity = 122/321 (38.01%), Postives = 174/321 (54.21%), Query Frame = 1
Query: 19 SAFIADALADNTMDLWHHRLGHSSERVIRKMAKSGCIPSYRIDLRHRLSFCESCASTNMSARGPISAGAREPDSPS----LPTRMLEELSIDVAGPYPKDKKGNRYFVLLVDRFTRFKYIGLMKKKSDTFDHFMSFCESASRQNPGVSVNDVVSIRMDGGAQGGEFSRIRDFSAAHGIRVLPTGRGNPNGNALAEISIGKVCYKMRATLHASSLPHSYWSEALHHAVETTNRVPTRALEGSVSPYEKWYGHSPSVHHLRTFGSPCFVYQPLQLRPGKLLPKGLKHKFLSYGSSTGVYRLLS-PNNTVVMSKHVVFNEKEAV 966
S ++DA +T+DLWHHR H SER IR MAK+G IP+ I +LSFCE CA ++ R+P S + TR L+ L DVAG +P D K ++ +++ D +TRF+ MK K++ H SF R S+ V +IR+D G EFS + F GI + TG+ NP N +AE S V R L AS L + YWSEA ++V T NR T + S +PY+ + S+ HLR FGS C+ ++P + RPGKL + +K KFLSY + Y +L+ + + ++K VVF+E+ V
Sbjct: 32 SVLVSDAKVQSTIDLWHHRCVHISERRIRMMAKAGIIPASSIKATDKLSFCEDCA---------MAKATRQPHSKKPRFDVATRPLQCLHCDVAGKFPSDSKSRKWMLIVCDEYTRFRRCFFMKHKNEVLPHMQSFISMIQRVTQNNSLL-VENIRLDNGT---EFSELAAFCDRSGILLEQTGKDNPASNGIAERSNRIVLDMTRVVLRASGLSNYYWSEAAKYSVHTINRTTTSSSR-STTPYQSLFKKKASIDHLRVFGSICYAHRPSETRPGKLQERAVKCKFLSYNALERTYTVLNLTTHRLWVTKDVVFDERSVV 338
BLAST of mRNA_H-akashiwo_Contig120.20.1 vs. uniprot
Match: A0A8J2K8S8_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2K8S8_9HEXA) HSP 1 Score: 184 bits (468), Expect = 4.170e-46 Identity = 157/582 (26.98%), Postives = 254/582 (43.64%), Query Frame = 1
Query: 52 TMDLWHHRLGHSSERVIRKMAKSGCIPSYR-IDLRHRLSFCESCASTNMSARGPISAGAREPDSPSLPTRML---EELSIDVAGPYPKDKKGN-RYFVLLVDRFTRFKYIGLMKKKSDTFDHFMSFCESASRQNPGVSVNDVVSIRMDGGAQGGEFSRIRDFSAAHGIRVLPTGRGNPNGNALAEISIGKVCYKMRATLHASSLPHSYWSEALHHAVETTNRVPTRALEGSVSPYEKWYGHSPSVHHLRTFGSPCFVYQPLQLRPGKLLPKGLKHKFLSYGSSTGVYRLLSPNNTVVMSKH-VVFNEKE----------------------------AVSNSSTTSSPLEVESPS--------DRKRLRRRSMVGTLAWV-ANWTRPELAFTVHKLQ---RYQSNPEPKHFEAAQRAFRYLKGTQS--------ERLRLGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLACPQAEPTPVIEDNSACIEWARDMVISRKTRHFHVSYHLAKEQVNLGTIRTHYARTSDQLADIFTKAL 1635
T +LWH RL H + I++ + + +D+ + CE C + +R+P R E + D+AGP G +YF+LL D+ + F+ +K K++T F Q N V D G + + + DF G+ + + P N E I + R L AS +P+S W+EA+ AV NR+ ++ V+P+E + P + HLR FG F + P R G PKG + + YGS +RL V H V F E + + SN P SP+ + + +GT A +N +P+LA T + ++ S + +H++AA++ RYLK T E ++ L YTD+D+ D++ KS +G V++L ++ + W+S+ Q+ + S+ EAEY+A+ SG ++++WLR L +L PQ PT V+ DN + I ++ + +T+H V YH ++Q G + Y T+DQLAD TK L
Sbjct: 460 TTNLWHRRLAHVNHEYIKESVGRDAVDGIKKVDIANS-DKCEECQ---------LGKQSRKPYPRKSSVRACNPGEIIHADLAGPMNTPSLGGAKYFLLLKDQASGFRLASFLKFKNETAKAVQDFVNFLETQTG----NKVKEFWTDNGTELVNQT-LNDFFKDKGVVRITSSPYCPQMNGKIERDIRTIKDSARTMLVASQVPNSLWAEAVATAVFVHNRL-LDSVHRDVTPFEAIFKKKPRLDHLREFGCMAFAHIPEIQRSG-FDPKGKRTILVGYGSHNIKFRLYDEETGKVFEAHNVTFFEGQPGRTTLDTTIETEDNLQVTLQTSQQTSVSASNEQVDPRPCHSRSPASTSESTVLEYSKSGENITLGTQALKQSNDRQPDLAATTNSSDAPNKFVSAFDEQHWKAAKQVLRYLKRTADLGITYNKLESQNEDAEVFLTCYTDSDYAGDKVQRKSTSGVVVLLNNAIVSWSSQKQSCIALSSTEAEYVAVASGAREVVWLRSCLSELGYPQVRPTLVLVDNQSAIRLVKNPEMHARTKHIDVRYHYIRDQEAKGEVSVQYVPTTDQLADGLTKPL 1024
BLAST of mRNA_H-akashiwo_Contig120.20.1 vs. uniprot
Match: A0A4Y2JK05_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2JK05_ARAVE) HSP 1 Score: 170 bits (431), Expect = 1.120e-42 Identity = 132/463 (28.51%), Postives = 218/463 (47.08%), Query Frame = 1
Query: 49 NTMDLWHHRLGHSSERVIRKMAKSGCIPSYRIDLRHRLSFCESCASTNMSARGPISAGAREPDSPSLPTRMLEELSIDVAGPYPK-DKKGNRYFVLLVDRFTRFKYIGLMKKKSDTFDHFMSFCESASRQNPGVSVNDVVSIRMDGGAQ--GGEFSRIRDFSAAHGIRVLPTGRGNPNGNALAEISIGKVCYKMRATLHASSLPHSYWSEALHHAVETTNRVPTRALEGSVSPYEKWYGHSPSVHHLRTFGSPCFVYQPLQLRPGKLLPKGLKHKFLSYGSSTGVYRLLSPNNTVVMSKHVVFNEKEAVSNSSTTSSPLEVESPSDRKRLRRRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRLG--GDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLL 1422
NT DLWH R H + + +K+ + L E C S + +S + R LE L +D+ GP P + GN YF ++V+ F+R + ++ KSD F F+ F + A R V+S+R DGG + EF + F GIR T +P N +AE ++A L +S + +W+EAL NR + +P+E + G PSV HL+ FG +V P Q R KL + Y +T YR+L + ++ + + + R+++G+LA++A TRP++ + V+ L ++QSNP KH ++ + YL+ T++ L L +L L+ Y+D+DF +R D S+ GY++ L ++PI W + Q V+ ST+EAEY+ L K+++W++++L
Sbjct: 118 NTSDLWHERFCHINNDYVLNTSKNNSVKG----LPKLFGLTEDCISCKPAKSRRVSFKSM---GQIRSKRPLELLHMDLCGPLPVLCQGGNIYFFMIVEDFSRKVTVFPIRNKSDAFQTFIRFQKRAER----FLNRKVISVRTDGGLEFCNQEFEK---FLEKLGIRHEKTNPYSPEMNGVAESFNLTALDGVKALLKSSGMSQKFWAEALLCFTYAWNRA---CHKNKKTPFELYSGRKPSVSHLKKFGCIAYVGVPKQTRK-KLDMRAKLGIMCGYAQTTKGYRIL------------LLEDQRVI------------------ETINVRNLLGSLAFIAGRTRPDIMYAVNLLSQFQSNPGIKHCQSLLKLLGYLQSTRNYILDLSKVNNLNLKWYSDSDFAANRDDRVSIGGYILFLDETPISWGTFKQRCVSLSTMEAEYVTLTEAAKELIWIKNVL 532
BLAST of mRNA_H-akashiwo_Contig120.20.1 vs. uniprot
Match: A0A5H2XJY8_PRUDU (BURP domain-containing protein n=2 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2XJY8_PRUDU) HSP 1 Score: 167 bits (424), Expect = 2.000e-40 Identity = 159/594 (26.77%), Postives = 246/594 (41.41%), Query Frame = 1
Query: 61 LWHHRLGHSSERVIRKMAKSGCIPSYRIDLRHRLSFCESCASTNMSARGPISAGAREPDSPSLPTRMLEELSIDVAGPYPKDK-KGNRYFVLLVDRFTRFKYIGLMKKKSDTFDHFMSFCESASRQNPGVSVNDVVSIRMDGGAQ--GGEFSRIRDFSAAHGIRVLPTGRGNPNGNALAEISIGKVCYKMRATLHASSLPHSYWSEALHHAVETTNRVPTRALEGSVSPYEKWYGHSPSVHHLRTFGSPCFVYQPLQLRPGKLLPKGLKHKFLSYGSSTGVYRLLSPNNT-VVMSKHVVFNE------KEAVSNS-STTSSPLEVES-----PS-----------------DRKRLRR----------------------------RSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRL--GGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLA-CPQAEPTPVIEDNSACIEWARDMVISRKTRHFHVSYHLAKEQVNLGTIRTHYARTSDQLADIFTKALNAEVF 1650
+WH RLGH + R ++++ + + L C C A +P LE + D+ GP + GN+YF+LL+D TR ++ L++ KS+ + F F Q V +R D G + EFS++ + + GI+ + P N + E V +A LH +P+ W+EA+H AV NR PT+AL+ S++P+E + G P + HL+ KL K ++ F+ Y + YR+ P+ +++S+ VVF+E KE NS + T P + E+ PS D+ L+ R +VG+L ++ TRP++ + L RY KH+ AA+R RY+KGT L G VL + D+D+ D KS +GY G W S Q V ST EAEY++ +WLR +L D P +P + +T+H YH K+ + G + Y T +Q+ADIFTKAL + F
Sbjct: 435 IWHKRLGHLNLRSLKQLREKEMVHGLP-HLEDANGVCAGCQMGKQHRDWFPKEQAWRAKNP------LELIHTDLCGPMQNESIAGNKYFMLLIDDHTRMSWVYLLRHKSEALNCFRKFKAMVELQCDFK----VKCLRSDRGGEFLSTEFSKLLE---SEGIQRQLSIAYTPQQNGVVERKNRTVVEMAKAMLHDKGMPYFLWAEAVHTAVYILNRTPTKALD-SMTPFEAYSGRKPGIGHLKK---------------QKLDAKSVQGVFVGYATCEKGYRVFDPSTKKLILSRDVVFDETKSWNWKETSENSVAMTYVPKQAENGFEVTPSKDSSIFIHQKKYASALLDKFGLKECKSVSIPLVATEKLSKEDGSGAADEEQYRKLVGSLLYLTA-TRPDVMYAASLLARYMHGLSNKHYGAAKRVLRYVKGTLDYGLHYMKGKKAVLVGFCDSDWGGSVDDSKSTSGYAFSFGSGVFSWTSVKQNCVALSTAEAEYISAAEATTQAIWLRFVLEDFGELPAKQP------------------LCSRTKHIDRRYHFIKDALQQGIVDLVYCPTKEQVADIFTKALPKDRF 979
BLAST of mRNA_H-akashiwo_Contig120.20.1 vs. uniprot
Match: A0A6A3JMT1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JMT1_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.560e-39 Identity = 84/202 (41.58%), Postives = 123/202 (60.89%), Query Frame = 1
Query: 1036 RSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLV--LRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLACPQAEPTPVIEDNSACIEWARDMVISRKTRHFHVSYHLAKEQVNLGTIRTHYARTSDQLADIFTKAL 1635
RS++G+L+++A TRP++A V +L RY NP +H++AA + RYLKGT++ + GG + L AY+DAD+ DR D +SV+G V+ML +P+VW + Q V ST EAEY+AL +K+ MW R LL +L Q T + EDN I AR+ +T+H + YH +E++ G I Y T +Q+AD TK L
Sbjct: 174 RSIIGSLSYLAGSTRPDIAVAVSRLSRYLENPGIRHWDAAIKIVRYLKGTRNYGVHFGGKMSPELIAYSDADWGSDRDDRRSVSGTVLMLFGAPVVWKTGYQKTVALSTTEAEYMALTMCVKECMWARLLLKNLGLKQEGATTIHEDNQGAIALARNTGYQSRTKHISIRYHYLRERIIAGDIELKYINTKEQVADFLTKGL 375
BLAST of mRNA_H-akashiwo_Contig120.20.1 vs. uniprot
Match: A0A0B2R595_GLYSO (Copia protein (Fragment) n=1 Tax=Glycine soja TaxID=3848 RepID=A0A0B2R595_GLYSO) HSP 1 Score: 151 bits (381), Expect = 9.120e-39 Identity = 84/209 (40.19%), Postives = 126/209 (60.29%), Query Frame = 1
Query: 1036 RSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRLG--GDLVLRAYTDADF--CQDRIDGKSVTGYVIMLGDSPIVWASKLQTAVTTSTVEAEYLALRSGLKDIMWLRHLLVDLACPQAEPTPVIEDNSACIEWARDMVISRKTRHFHVSYHLAKEQVNLGTIRTHYARTSDQLADIFTKALNAEVF 1650
R +VG L ++ N TRP++ + V +L +Y S+P H +AA R RYLKGT + L G+ LRA++D+D+ CQD +S+TG+++ LG SP+ W SK QT V+ S+ EAEY AL S ++ WL +LL D EP + DN + I+ A + V +T+H + H+ +++V G ++ ++S QLADIFTKAL VF
Sbjct: 1 RRLVGQLIYLTN-TRPDIVYAVQQLSQYMSSPTNMHLQAAYRVLRYLKGTPGSGIYLSAVGNPQLRAFSDSDWAGCQD--SRRSITGFIVYLGSSPVSWKSKKQTTVSRSSSEAEYRALASTTCELQWLTYLLQDFRIKFVEPATIYCDNHSAIQIATNPVFHERTKHIEIDCHIVRQRVTSGHLKLLPVQSSSQLADIFTKALPPTVF 206 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig120.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig120.20.1 >prot_H-akashiwo_Contig120.20.1 ID=prot_H-akashiwo_Contig120.20.1|Name=mRNA_H-akashiwo_Contig120.20.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=550bp SPVAAGSAFIADALADNTMDLWHHRLGHSSERVIRKMAKSGCIPSYRIDLback to top mRNA from alignment at H-akashiwo_Contig120:927297..929288+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig120.20.1 ID=mRNA_H-akashiwo_Contig120.20.1|Name=mRNA_H-akashiwo_Contig120.20.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1992bp|location=Sequence derived from alignment at H-akashiwo_Contig120:927297..929288+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig120:927297..929288+ >mRNA_H-akashiwo_Contig120.20.1 ID=mRNA_H-akashiwo_Contig120.20.1|Name=mRNA_H-akashiwo_Contig120.20.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1650bp|location=Sequence derived from alignment at H-akashiwo_Contig120:927297..929288+ (Heterosigma akashiwo CCMP452)back to top |