mRNA_H-akashiwo_Contig120.19.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig120.19.1 vs. uniprot
Match: A0A6V1Q1T2_HETAK ((R)-citramalate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q1T2_HETAK) HSP 1 Score: 1268 bits (3282), Expect = 0.000e+0 Identity = 649/649 (100.00%), Postives = 649/649 (100.00%), Query Frame = 3
Query: 69 MCRFQKTFIVGAWAILVLALFCSGFVPSPHQTRQTRTLIKSISSLRMSTMDNSKEVTSEMDDVLSSQRTSNMPDGLSAKHLDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEFPGVRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVGERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEMMNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKEFGLCVTDVECAAWADSSLQILNDIKVLEKMGYSFEGAEASVELMLRRMVENYAPPFNIVDYSCQIMDQVATSHTVTQRGAAAAAAAGLLASGQARATVKMEVSDGAQGEGRRTLLEVAEGNGPVDALGQALRRGLEPAFPLLREVRLSDYKVRILDHQGAKATASTTRVMIEFKRHNEFTGLTESWTTVGVDSNIISASFNALSDGFEYFLALKCDAQSLECRLD 2015
MCRFQKTFIVGAWAILVLALFCSGFVPSPHQTRQTRTLIKSISSLRMSTMDNSKEVTSEMDDVLSSQRTSNMPDGLSAKHLDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEFPGVRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVGERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEMMNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKEFGLCVTDVECAAWADSSLQILNDIKVLEKMGYSFEGAEASVELMLRRMVENYAPPFNIVDYSCQIMDQVATSHTVTQRGAAAAAAAGLLASGQARATVKMEVSDGAQGEGRRTLLEVAEGNGPVDALGQALRRGLEPAFPLLREVRLSDYKVRILDHQGAKATASTTRVMIEFKRHNEFTGLTESWTTVGVDSNIISASFNALSDGFEYFLALKCDAQSLECRLD
Sbjct: 1 MCRFQKTFIVGAWAILVLALFCSGFVPSPHQTRQTRTLIKSISSLRMSTMDNSKEVTSEMDDVLSSQRTSNMPDGLSAKHLDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEFPGVRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVGERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEMMNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKEFGLCVTDVECAAWADSSLQILNDIKVLEKMGYSFEGAEASVELMLRRMVENYAPPFNIVDYSCQIMDQVATSHTVTQRGAAAAAAAGLLASGQARATVKMEVSDGAQGEGRRTLLEVAEGNGPVDALGQALRRGLEPAFPLLREVRLSDYKVRILDHQGAKATASTTRVMIEFKRHNEFTGLTESWTTVGVDSNIISASFNALSDGFEYFLALKCDAQSLECRLD 649
BLAST of mRNA_H-akashiwo_Contig120.19.1 vs. uniprot
Match: A0A7S2UWY3_9STRA ((R)-citramalate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWY3_9STRA) HSP 1 Score: 656 bits (1693), Expect = 4.940e-225 Identity = 347/572 (60.66%), Postives = 420/572 (73.43%), Query Frame = 3
Query: 303 KHLDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEFPGVRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVGERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEMMNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKEFGLCVTDVECAAWADSSLQILNDIKVLEKMGYSFEGAEASVELMLRRMVENYAPPFNIVDYSCQIMDQVATSHTVTQRGAAAAAAAGLLASGQARATVKMEVSDGAQGEGRRTLLEVAEGNGPVDALGQALRRGLEPAFPLLREVRLSDYKVRILDHQ-GAKATASTTRVMIEFKRHNEFTGLTESWTTVGVDSNIISASFNALSDGFEYFLALKCDAQSLECRLD 2015
+ ++IYDTTLRDGTQ ES+SV+V+GKL IA+RL EFG+ YIEGGWPGSNPKD EFF RA+ EL ++ AFGSTRRKF +D QIA L++S C+C+VGKS D H+D+ILEVPREENLAMV DS+ +LK G+EVMLDLEHF DG S+P ++ VC+AAVDAGVDVLV+CDTNGG LPWE+ R V FP VRLGIHCHNDQELAVAN+L A+R G ++VQGT+NG+GERTGNANL S++P LQLKMGY GVG KL++LT +SRF DE+MNR P + P+VGASAFAHKGGIHVSA+AKNP SYQH++P+ VGN +RVLVS+LAGRSNI+ KV+E+GL D + W + S+QILN +K LEK GY+FEGAEASV LMLRR + Y PPF I DY QI DQ S R + + G ARATVK+ V + E + LLEVAEGNGPV+AL AL +GL P FP+L E+ LSDYKVRILD G T+S RVM++FK+ N + +TTVG DSNIISAS NAL DG EY L + L C +D
Sbjct: 90 QEVEIYDTTLRDGTQAESISVSVEGKLRIAERLAEFGVHYIEGGWPGSNPKDKEFFERAKTELSPEARTKLTAFGSTRRKFKKAAEDSQIAALVDSGVDCICLVGKSSDFHVDKILEVPREENLAMVHDSIHYLKGLGKEVMLDLEHFIDGFKSNPQYSMSVCQAAVDAGVDVLVMCDTNGGSLPWEVAHVTREVRKMFPEVRLGIHCHNDQELAVANTLEAVREGATVVQGTINGLGERTGNANLCSVIPNLQLKMGYHGVGD-KLKDLTSVSRFSDELMNRSPNPAAPFVGASAFAHKGGIHVSAIAKNPLSYQHIEPEEVGNLKRVLVSELAGRSNIMTKVEEYGLIGQDSDLNVWKERSVQILNKVKALEKSGYTFEGAEASVNLMLRRSSDMYTPPFAIQDYMLQIWDQDVDS---VMRFSDPSVVEPYYFHGSARATVKVLVMEHTCNE--KQLLEVAEGNGPVNALANALMKGLVPTFPVLEELELSDYKVRILDMSCGKSGTSSVVRVMMDFKKSNG-----DKYTTVGADSNIISASLNALVDGLEYALIGE-----LNCAVD 645
BLAST of mRNA_H-akashiwo_Contig120.19.1 vs. uniprot
Match: D8LTV2_ECTSI ((R)-citramalate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTV2_ECTSI) HSP 1 Score: 610 bits (1573), Expect = 1.090e-207 Identity = 329/572 (57.52%), Postives = 398/572 (69.58%), Query Frame = 3
Query: 285 PDGLSAKHLDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEFPGVRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVGERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEMMNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKEFGLCV-TDVECA-AWADSSLQILNDIKVLEKMGYSFEGAEASVELMLRRMVENYAPPFNIVDYSCQIMDQVATSHTVTQRGAAAAAAAGLLASGQARATVKMEVSD-------GAQGEGRRTLLEVAEGNGPVDALGQALRRGLEPAFPLLREVRLSDYKVRILDHQGAKATASTTRVMIEFKRHNEFTGLTESWTTVGVDSNIISASFNALSDGFEYFL 1973
P+G + +++YDTTLRDGTQ E +S +V KL IA +L FGM YIEGGWPGSNPKD EFF RAR ELP W RVVAFGSTRRKF +DKQ+ L+ + GCV IV K+WDLH+D ILEVPREENLAMV +SV HLK AG+EVMLDLEHFFDG ++ T+ VC AAV A VDVLVLCDTNGG LPWEI+ VR V A +PG RLGIHCHNDQ LAVANSL A+R+G +VQGTVNG+GERTGNANL +++PTLQLKMG GVG L LT LSRF DE N + P+ G SAFAHKGGIHVSA+ K P SYQH+DP VGN +RVLVS+L+G+SNI++KV++ G+ T+++ + W + Q+L +K LE GYS+EGA+ASV L++RR + Y PPF ++DY QI D T + A RATVK+ V G +GE LEVAEGNGPVDAL + L R L P FP L+ V+LSDYKVRILD + A T + TRV+IEF + G W+TVGV++NIISAS +AL DGFEY L
Sbjct: 37 PEGEVLRTVEMYDTTLRDGTQMEGISASVLDKLKIALQLHHFGMHYIEGGWPGSNPKDVEFFERARKELPAEAWERVVAFGSTRRKFKACAEDKQLESLISAGTGCVTIVAKAWDLHVDHILEVPREENLAMVRESVEHLKMAGKEVMLDLEHFFDGWKANREYTMQVCEAAVGAKVDVLVLCDTNGGSLPWEIDEIVRDVKAAYPGTRLGIHCHNDQGLAVANSLQAVRSGADVVQGTVNGIGERTGNANLMTIIPTLQLKMGMTGVGE-HLTNLTALSRFTDEQFNMAHTSGAPFTGISAFAHKGGIHVSAVNKIPDSYQHIDPAQVGNMKRVLVSELSGQSNILSKVEDSGMASKTELKASKVWRERMGQVLKTVKRLETEGYSYEGADASVNLLVRRTMSGYVPPFKLLDYLVQIWDSDRTPGGLEFPSGPTTA----------RATVKVRVPSMDSEAELGIEGENPGVRLEVAEGNGPVDALAKGLFRALLPTFPSLQSVKLSDYKVRILDQESA--TQAKTRVLIEFYEKSSDVG----WSTVGVNTNIISASMSALMDGFEYAL 591
BLAST of mRNA_H-akashiwo_Contig120.19.1 vs. uniprot
Match: A0A836CCG4_9STRA ((R)-citramalate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCG4_9STRA) HSP 1 Score: 568 bits (1464), Expect = 3.960e-190 Identity = 333/648 (51.39%), Postives = 403/648 (62.19%), Query Frame = 3
Query: 309 LDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVV-----------AFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEFPGVRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVG--------------ERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEMMNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKEFGL-CVTDVECAAWADSSLQILNDIKVLEKMGYSFEGAEASVEL------------------MLRRMVENYAPPFNIVDYSCQIMDQVATSHTVTQRGAAAAAAAGLLASGQARATVKMEVSDGAQ---------GEGRRTL-LEVAEGNGPVDALGQALRRGLEPAFPLLREVRLSDYK---------------------------VRILDHQGAKATASTTRVMIEF--KRHNEFTGLTESWTTVGVDSNIISASFNALSDGFEYFLALKCDAQSLE 2003
+DIYDTTLRDGTQ E +SV+VD KL IA+ L FGM YIEGGWPGSNPKDAEFF RA+AE P W R+ AFGSTRRK EQDKQ+A L+ + CV IV K+WDLH+D ILEVPREENLAMV +SVA LKAAG+EVM+DLEHFFDG ++PA T+ VC AV+AG DVLVLCDTNGG L WE++ VR VA+ FPGVRLGIHCHNDQELAV+NSL A+++G ++ ERTGNANLAS+VPTLQLKMG AGVG +L ELT L RFVDE +NR+P + P+VG SAFAHKGGIHVSA+ K P SYQH+DP VGN RR LVS+L+GRSNI++KV+EFG+ + W D ++L +K LEK G +FEGA+A+V L M+RR++ Y PF ++DY+ D + + RG ++ S RATVK+++ G G RT LE AEGNGPV+AL +AL + L P FP L+ V L DYK VRILD + A TA+ TRVMIEF HN+ W TVGVD+NIISAS AL DGFEY L SL+
Sbjct: 34 VDIYDTTLRDGTQMEGISVSVDDKLKIARVLSNFGMHYIEGGWPGSNPKDAEFFERAKAEPPPDVWSRIAEXXXXXXXXXAAFGSTRRKNSTCEQDKQLATLIAAGTNCVTIVAKAWDLHVDHILEVPREENLAMVGESVAFLKAAGKEVMIDLEHFFDGFKANPAYTMQVCERAVEAGADVLVLCDTNGGTLGWEVDQAVRTVASAFPGVRLGIHCHNDQELAVSNSLQAVQSGATVXXXXXXXXXXXXXXXXXXXXXXXERTGNANLASIVPTLQLKMGCAGVGE-RLPELTALCRFVDEQLNRLPDSKAPYVGQSAFAHKGGIHVSAVNKIPDSYQHIDPAAVGNVRRTLVSELSGRSNILSKVEEFGMGSKEEFSSPEWQDRMNRVLTAVKTLEKRGSTFEGADATVNLIEPLRXXXXXXXXXXXXXMIRRLMPGYTAPFRLMDYTVTAADTMGSD---ALRGEETGTPGSVMPS--VRATVKVKLPAGVSQMESLASFWDNGDRTQRLESAEGNGPVNALAKALNKALLPTFPSLQHVVLKDYKASRRPAQLPELRVFVGEVVQELKFQLKVRILDQESA--TAANTRVMIEFMDSHHNQ------QWATVGVDTNIISASMCALMDGFEYALVEYAPCCSLD 667
BLAST of mRNA_H-akashiwo_Contig120.19.1 vs. uniprot
Match: A0A1Z5JTT2_FISSO ((R)-citramalate synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTT2_FISSO) HSP 1 Score: 555 bits (1429), Expect = 1.100e-185 Identity = 300/583 (51.46%), Postives = 388/583 (66.55%), Query Frame = 3
Query: 303 KHLDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEFPG-VRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVGERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEMMNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKEFGLCVTDVECAAWADSSLQILNDIKVLEKMGYSFEGAEASVELMLRRMVENYAPPFNIVDYSCQIMDQVATSHT--VTQRGAAAAAAAGLLASGQARATVKMEVSDGAQGEGR---------RTLLEVAEGNGPVDALGQALRRGLEPAFPLLREVRLSDYKVRILDHQGAKATASTTRVMIEFKRHNEFTGLTESWTTVGVDSNIISASFNALSDGFEYFLALKCDAQSLECRLD 2015
KH IYDTTLRDGTQGESVS + D KL I +RL EFG+ YIE GWPGSNPKDAEFF RA+ ELP + ++VAFGSTRRK +QD Q+ +L++S+A VCIV KS + EIL+ +ENL M+ D+V HL AGR+VM+D+EHFFDG A+DPA L C AA DAG LVLCDTNGG +PW + +RV F V +GIHCHND +AVANS++A + G L+QGT+NG+GERTGNA+L S++PTL L MG + +L LT +SR+VDE++NR P + P+VG SAFAHKGG+HV+AM ++P SYQH+DP +VGN RVL+S+L+GR NI++K++ G+ D+ D +L ILN +K LE +GY+FEGAEASV LM+ Y PPF ++DYS Q+ D S T + + G ++++ A ARAT+K+ G+ + LEV +GNGPVDAL AL R + P+ P L+ + L DYKVRILD Q A T + TRVMIEF+ + T WTTV VD+N+ISAS NAL DGFEY L + L LD
Sbjct: 60 KHAIIYDTTLRDGTQGESVSASADDKLKICRRLAEFGVDYIEAGWPGSNPKDAEFFRRAQTELPETARAKLVAFGSTRRKNTSADQDTQVQLLIDSKAPTVCIVAKSHSWQVQEILKADLQENLDMIRDTVQHLTNAGRQVMVDMEHFFDGYAADPAYALQCCEAAADAGATCLVLCDTNGGTMPWTVGQVSQRVVRHFDRYVTIGIHCHNDCGMAVANSVSACQNGIGLIQGTINGIGERTGNADLCSIIPTLALHMGSNIACKKQLLNLTSVSRYVDEILNRSPNVAAPYVGISAFAHKGGLHVAAMERSPLSYQHIDPALVGNEMRVLISELSGRQNILSKMEAAGV---DISETGTNDRALAILNRVKELEAVGYTFEGAEASVHLMILHATRGYCPPFRVLDYSAQVYDSNIDSATRVMKKHGISSSSLAPT-----ARATIKVRTVSGSSDDDDCDTTNRPPFEDRLEVGDGNGPVDALAAALTRAVTPSHPYLKNIELVDYKVRILDPQSA--TQAATRVMIEFRDTQKDT----KWTTVSVDTNVISASLNALVDGFEYALIEHSQSCPLYDDLD 628
BLAST of mRNA_H-akashiwo_Contig120.19.1 vs. uniprot
Match: A0A7S4QUS5_9STRA ((R)-citramalate synthase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QUS5_9STRA) HSP 1 Score: 541 bits (1394), Expect = 6.290e-180 Identity = 310/642 (48.29%), Postives = 417/642 (64.95%), Query Frame = 3
Query: 135 SGFVPSPHQTRQTRTL-IKSISSLRMST------MDNSKEVTSEMDDVLSSQRTSN-----MPDG--LSAKHLDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEFPGVRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVGERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEMMNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKEFGLCVTDVECAAWADSSLQILNDIKVLEKMGYSFEGAEASVELMLRRMVENYAPPFNIVDYSCQIMDQ-VATSHTVTQRGAAAAAAAGLLASGQARATVK---MEVSDGAQGEGRRTL-----LEVAEGNGPVDALGQALRRGLEPAFPLLREVRLSDYKVRILDHQGAKATASTTRVMIEFKRHNEFTGLTESWTTVGVDSNIISASFNALSDGFEYFLALKCDA 1991
+ FV H++++TR ++S S+ +++T +N K ++ ++D L + +S+ + DG + + +YDT+LRDGTQGES+S + + KL IA RL FG+ YIE GWPGSNPKDAEFF RA+ EL S ++VAFGSTRRK + VEQD QI MLL+S A CIV KS + +I+ +ENL M+ADSVA+L + R V +DLEHFFDG D + C+AAVDAG LVLCDTNGG +PW++ +V FP V +G+H HND +AVANSL A ++G ++QGT+NG+GERTGNA+L S+VP+L L + L +T LSRF+DE +NR P ++ P+VGASAFAHKGG+HV+AM ++P SYQHV+P +VGN +RVLVS+L+GR NI+ K ++ GL V + + + ILN +K LE +GY+FEGA+ASV LM+ Y PPF I+DYS Q+ D + ++ V ++G A + S ARAT+K + + D A G L LEV++GNGPVDAL AL+R L P P L + L+DYKVRILD + KAT +TTRVMI+F E T ESWTTV VD N+ISAS NAL DGFEY L D+
Sbjct: 23 TAFVVPNHKSKRTRAFHVESSSTTQVTTNKNNVDAENDKWLSESIEDELQKKSSSSSSGHAVDDGAVVGPGAVLVYDTSLRDGTQGESISASCEDKLKIANRLSTFGVDYIEAGWPGSNPKDAEFFTRAQTELSPSAKSKLVAFGSTRRKAIAVEQDAQIQMLLDSHAPTCCIVAKSHLWQVTDIIRATPQENLDMIADSVAYLTSQNRRVFIDLEHFFDGYTFDEDYAMKCCQAAVDAGAKGLVLCDTNGGSMPWDVAHITSKVVQTFPQVTVGMHAHNDCGMAVANSLMAAKSGAGMIQGTINGIGERTGNADLCSIVPSLSLHVKSNLTCNPSLANITSLSRFIDETLNRSPDSAAPYVGASAFAHKGGLHVAAMERSPMSYQHVEPALVGNEKRVLVSELSGRQNILGKFRDAGL-VDHPDDDPVEERASAILNRVKHLESIGYTFEGADASVHLMILHSTRGYCPPFRILDYSAQVYDNNMDSASRVLEKGKLEHANG--MGSSTARATIKVRTLNLDDEAYTSGDAPLAFIDRLEVSDGNGPVDALSSALKRALSPPHPFLNTIELTDYKVRILDPE--KATGATTRVMIDF----EDTTTGESWTTVSVDRNVISASLNALVDGFEYALVQHSDS 655
BLAST of mRNA_H-akashiwo_Contig120.19.1 vs. uniprot
Match: R7QGZ5_CHOCR ((R)-citramalate synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGZ5_CHOCR) HSP 1 Score: 535 bits (1378), Expect = 5.220e-179 Identity = 290/558 (51.97%), Postives = 373/558 (66.85%), Query Frame = 3
Query: 309 LDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEFPGVRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVGERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEMMNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKEFGLCVTDVECAA---WADSSLQILNDIKVLEKMGYSFEGAEASVELMLRRMVENYAPPFNIVDYSCQIMDQVATSHTVTQRGAAAAAAAGLLASGQARATVKMEV---SDGAQGEGRRTLLEVAEGNGPVDALGQALRRGLEPAFPLLREVRLSDYKVRILDHQGAKATASTTRVMIEFKRHNEFTGLTESWTTVGVDSNIISASFNALSDGFE 1964
+ +YDTTLRDG QGE +S++V KL IA RL EFG YIEGGWPGSNPKDA FF R +L + ++VAFGSTR K E+D+ + ML ++ V +VGK+WD+ + +LE EENL M+ +SVA+ K GREVMLD EHF+DG + P + +AAVD GVDVLVLCDTNGG +PW+++ V FP R+G+HCHND ELAVANS++A+ AG SLVQGTVNG GERTGNANL S+VPTLQLK+GYA VG A L +LT LSRFVDE+ + P + QP+VG S+FAHKGG+HV+A+ KN +YQH+DP +VGN +R+LVS+LAGR N+++K +E GL + A W + + Q+L +K LE GYSFEGAEAS+ELMLRR VE Y PPF ++D+S D + G +ATVK+ + DG + + LEVAEGNGP+DA+ AL + L + L+ V L+DYKVRILD + A TA+TTRV+++F E + WTTV NII AS NAL DGFE
Sbjct: 8 IQVYDTTLRDGAQGEGISLSVADKLKIATRLDEFGAHYIEGGWPGSNPKDAAFFENCRGKLKRA---KLVAFGSTRYKNTTCEKDRNVQMLANADTLVVTLVGKAWDMQVQVVLEASLEENLDMIRESVAYFKRLGREVMLDAEHFYDGYKAAPEYAIACLQAAVDGGVDVLVLCDTNGGSVPWDLQKVTATVVHRFPATRVGVHCHNDMELAVANSISAVNAGASLVQGTVNGYGERTGNANLMSIVPTLQLKLGYACVGDA-LSKLTSLSRFVDEIACQKPVSGQPFVGVSSFAHKGGLHVAAVLKNEDTYQHIDPSLVGNEKRILVSELAGRRNVLSKAEELGLVPAGDDAGARQEWGNRAKQVLGQVKDLENKGYSFEGAEASLELMLRRSVEGYRPPFELLDFSVTT-DNKRIHYGPNSEGPP-------FNESVTQATVKIALLGPKDGGEACPTKICLEVAEGNGPIDAVNGALGKVLFSMYQPLQTVALTDYKVRILDSESA--TAATTRVVVDF----EDSASGRQWTTVYAHPNIIVASVNALMDGFE 547
BLAST of mRNA_H-akashiwo_Contig120.19.1 vs. uniprot
Match: A0A2V3IHB1_9FLOR ((R)-citramalate synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHB1_9FLOR) HSP 1 Score: 531 bits (1367), Expect = 4.930e-177 Identity = 293/569 (51.49%), Postives = 378/569 (66.43%), Query Frame = 3
Query: 303 KHLDIYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEFPGVRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVGERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEMMNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKEFGLCVTDV--ECAAWADSSLQILNDIKVLEKMGYSFEGAEASVELMLRRMVENYAPPFNIVDYSCQ----------IMDQVATSHTVTQRGAAAAAAAGLLASGQARATVKMEV---SDGAQGEGRRTLLEVAEGNGPVDALGQALRRGLEPAFPLLREVRLSDYKVRILDHQGAKATASTTRVMIEFKRHNEFTGLTESWTTVGVDSNIISASFNALSDGFE 1964
K + IYDTTLRDG+QGE +S+TV KL +A+RL EFG YIEGGWPGSNPKD FFA+ + L + ++VAFGSTR K E DK + L++++ V +VGK+WD + +LE +ENLAM++D+VA K GREVMLD EHF+DG + PA L AAV AGVDVLVLCDTNGG LPWEI+ R V AEFP VR+GIHCHND ELAV+N++AA+ AG +LVQGT+NG GERTGNANL S+VPTLQLKMG+ VG +L++LT LSR+ DE+ N+ ++P+VGAS+FAHKGG+HV+A+ K+ +YQH+DP +VGN RR+LVS+L+GR NI+ K +E GL D + W +L +K LE GYSFEGAEAS+ELMLRR V Y PPF ++D+S +++ + +VTQ A+VK+ + DG + E+AEGNGPVDA+ AL++ L P + LR V L DYKVRILD+ A TA+ TRVM+EF+ + + WTTV NII AS NAL DGFE
Sbjct: 29 KTVQIYDTTLRDGSQGEGISLTVPDKLKLAQRLDEFGAHYIEGGWPGSNPKDESFFAQCKG-LDNA---KLVAFGSTRYKGTTCEHDKNVQALMKADTPVVTLVGKAWDHQVSVVLEATLDENLAMISDTVAFFKRKGREVMLDAEHFYDGYKASPAYALSCLHAAVKAGVDVLVLCDTNGGTLPWEIDEITRVVVAEFPTVRIGIHCHNDMELAVSNTIAAVHAGATLVQGTINGFGERTGNANLMSIVPTLQLKMGHDCVGD-RLQQLTDLSRYTDEITNQPHVPNRPYVGASSFAHKGGLHVAAVLKDENTYQHIDPVLVGNERRILVSELSGRRNILTKAEELGLHPADESKDGVEWNVRVKAVLEQVKELENKGYSFEGAEASLELMLRRTVHGYRPPFELLDFSVSTDNKRVVYGNVLNATPNNESVTQ------------------ASVKLALLGPEDGGDQCPTKICFEIAEGNGPVDAVNGALQKCLLPVYAPLRSVSLVDYKVRILDN--ASGTAAITRVMVEFEESSNG----KRWTTVYAHPNIIVASVNALMDGFE 568
BLAST of mRNA_H-akashiwo_Contig120.19.1 vs. uniprot
Match: A0A7C5E488_9CHLR ((R)-citramalate synthase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5E488_9CHLR) HSP 1 Score: 518 bits (1333), Expect = 8.630e-173 Identity = 295/553 (53.35%), Postives = 362/553 (65.46%), Query Frame = 3
Query: 315 IYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEFPGVRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVGERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEMMNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKEFGLCVTDVECAAWADSSLQILNDIKVLEKMGYSFEGAEASVELMLRRMVENYAPPFNIVDYSCQIMDQVATSHTVTQRGAAAAAAAGLLASGQARATVKMEVSDGAQGEGRRTLLEVAEGNGPVDALGQALRRGLEPAFPLLREVRLSDYKVRILDHQGAKATASTTRVMIEFKRHNEFTGLTESWTTVGVDSNIISASFNALSDGFEYFL 1973
+YDTTLRDGTQGE +S++ + KL IA++L EFG YIEGGWPGSNPKDAEFFAR + EL L ++ AFGSTR K ++D I L+E+ V +VGKSWDLH+ ILE EENL M+A+SVA+ K G+EV+ D EHFFDG ++P L +AA+ +G D +VLCDTNGG PWE+E ++VAA F G RLGIH HND EL VAN+LA +R G VQGTVNG GER GNANL S++P LQLKMGY V +L LT LSR+VDE+ N P QP+VG SAFAHKGGIHV+A+ K SYQH+DP VVGN +R +VS+L+GR NI+ K E GL + E Q+L IK LE GY+FEGAEASV++MLRR Y PPF ++D+ T ++G GL ATVK++V D E R T VAEGNGPV+AL ALRR L FP L+ V L+D+KVRILD TA+TTRVMI+F++ G TE WTTVG NII AS+ AL D EY L
Sbjct: 6 LYDTTLRDGTQGEGISLSCNDKLKIAQKLDEFGAHYIEGGWPGSNPKDAEFFAR-QGELKLKH-AKIAAFGSTRYKNTTCDKDANIQALVEANTPVVTLVGKSWDLHVRHILETDLEENLEMIAESVAYFKERGKEVIYDAEHFFDGYKANPDYALLTLQAAIKSGADCVVLCDTNGGSTPWEVEEITKQVAARFEGQRLGIHPHNDCELGVANALAGVRGGARHVQGTVNGYGERVGNANLISIIPDLQLKMGYECVKPEQLAGLTALSRYVDELANMTPNPHQPFVGYSAFAHKGGIHVAAILKVEESYQHMDPTVVGNEKRAVVSELSGRGNILYKAAERGLDTSREEAR-------QVLEQIKELENQGYTFEGAEASVDMMLRRANSGYKPPFEVIDFMVI---------TENRQGR------GLFT----EATVKVKVGD----EIRHT---VAEGNGPVNALNLALRRALYQDFPQLQRVHLTDFKVRILDSDAG--TAATTRVMIDFQQE----GTTEFWTTVGAHPNIIEASWRALIDSMEYAL 517
BLAST of mRNA_H-akashiwo_Contig120.19.1 vs. uniprot
Match: A0A448Z9P0_9STRA ((R)-citramalate synthase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9P0_9STRA) HSP 1 Score: 520 bits (1340), Expect = 2.310e-172 Identity = 287/569 (50.44%), Postives = 372/569 (65.38%), Query Frame = 3
Query: 315 IYDTTLRDGTQGESVSVTVDGKLAIAKRLGEFGMAYIEGGWPGSNPKDAEFFARARAELPLSTWRRVVAFGSTRRKFLPVEQDKQIAMLLESEAGCVCIVGKSWDLHIDEILEVPREENLAMVADSVAHLKAAGREVMLDLEHFFDGMASDPACTLDVCRAAVDAGVDVLVLCDTNGGRLPWEIEAGVRRVAAEF-PGVRLGIHCHNDQELAVANSLAALRAGCSLVQGTVNGVGERTGNANLASLVPTLQLKMGYAGVGRAKLRELTGLSRFVDEMMNRVPAASQPWVGASAFAHKGGIHVSAMAKNPASYQHVDPDVVGNTRRVLVSDLAGRSNIIAKVKE-FGLCVTDVECAAWADSSLQILNDIKVLEKMGYSFEGAEASVELMLRRMVENYAPPFNIVDYSCQIMDQVATSHTVTQRGAAAAAAAGLLASGQARATVKME-VSDGAQGEGRRTL----LEVAEGNGPVDALGQALRRGLEPAFPLLREVRLSDYKVRILDHQGAKATASTTRVMIEFKRHNEFTGLTESWTTVGVDSNIISASFNALSDGFEYFLALKCDAQSL 2000
I+DTTLRDGTQGE VS + D KL IA RL F + YIE GWPGSNPKD EFF RA+AEL T ++VAFGS+RRK VE+D QI L+ES+ VC+V K+ + EIL REENL M+ DSV +L G+ V++DLEHFFDG DP + C +AVDAG LV+CDTNGG +PWE+ + F P +GIHCHND +AVANS+A+ AG L+QGT+NG+GERTGNA+L S+VP+L L + + K+ ELT LSRFVDE++NR P + P+VG SAFAHKGG+HV+AM ++P SYQHV+P+ VGN RVL+S+L+GR NI+ K+++ FG ++++ + SL +LN +K LE MGY FEGA+ASV LM+ + Y PPF ++DYS Q DQ S + + A S ARAT+K+ VSD EG LEV++G GPVDAL +A+ + L P+ P L + L+DYKVRIL+ A T + TRV+I+F+ + WTTV VDSNI+SAS NAL DGFEY L D L
Sbjct: 68 IFDTTLRDGTQGELVSASCDDKLKIATRLAAFDVDYIEAGWPGSNPKDLEFFKRAKAELTEHTRSKLVAFGSSRRKNTAVEKDPQIQALVESDVSTVCMVVKAHSWQVTEILRATREENLQMIYDSVEYLTNLGKTVLVDLEHFFDGYKDDPEYAIACCESAVDAGARCLVMCDTNGGSMPWEVTDTTTAMVKHFEPFCTIGIHCHNDSGMAVANSIASCHAGVGLIQGTINGIGERTGNADLCSIVPSLALHVETDMTCKDKVPELTKLSRFVDEVLNRTPNTAAPYVGRSAFAHKGGLHVAAMERSPLSYQHVEPESVGNEMRVLISELSGRQNIMGKMQDMFG---SEMDVGQKSARSLAVLNRVKELENMGYQFEGADASVHLMILYSTQGYCPPFQVLDYSAQCYDQTMDSASRLMKTRAD--------SSTARATIKVRTVSDDPDLEGSGLSFVENLEVSDGAGPVDALAKAMLKALTPSHPSLESIELTDYKVRILNPNAA--TKAVTRVLIDFRDAET----DQKWTTVSVDSNIVSASLNALVDGFEYALIEHSDTCML 619 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig120.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig120.19.1 >prot_H-akashiwo_Contig120.19.1 ID=prot_H-akashiwo_Contig120.19.1|Name=mRNA_H-akashiwo_Contig120.19.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=650bp MCRFQKTFIVGAWAILVLALFCSGFVPSPHQTRQTRTLIKSISSLRMSTMback to top mRNA from alignment at H-akashiwo_Contig120:877307..884419+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig120.19.1 ID=mRNA_H-akashiwo_Contig120.19.1|Name=mRNA_H-akashiwo_Contig120.19.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=7113bp|location=Sequence derived from alignment at H-akashiwo_Contig120:877307..884419+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig120:877307..884419+ >mRNA_H-akashiwo_Contig120.19.1 ID=mRNA_H-akashiwo_Contig120.19.1|Name=mRNA_H-akashiwo_Contig120.19.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1950bp|location=Sequence derived from alignment at H-akashiwo_Contig120:877307..884419+ (Heterosigma akashiwo CCMP452)back to top |