mRNA_H-akashiwo_Contig12.19.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig12.19.1 vs. uniprot
Match: A0A7S3XRJ5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRJ5_HETAK) HSP 1 Score: 326 bits (836), Expect = 7.750e-108 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 2
Query: 2 ASLYFSIMTITSIGYGDITPTTAAEHWVCVLIMFLGSAVWAYVIGNASGIVATMDQDAILHNQTMDHLNQFVRERRVPRELGVKLRAYFNFSRDLARTQNNRALIDEMSPALRKAVAAKNQRWVKRVPWCRHGLSYDLVIDLVQRMQGSAYTENEALPCQDM 487
ASLYFSIMTITSIGYGDITPTTAAEHWVCVLIMFLGSAVWAYVIGNASGIVATMDQDAILHNQTMDHLNQFVRERRVPRELGVKLRAYFNFSRDLARTQNNRALIDEMSPALRKAVAAKNQRWVKRVPWCRHGLSYDLVIDLVQRMQGSAYTENEALPCQDM
Sbjct: 215 ASLYFSIMTITSIGYGDITPTTAAEHWVCVLIMFLGSAVWAYVIGNASGIVATMDQDAILHNQTMDHLNQFVRERRVPRELGVKLRAYFNFSRDLARTQNNRALIDEMSPALRKAVAAKNQRWVKRVPWCRHGLSYDLVIDLVQRMQGSAYTENEALPCQDM 376
BLAST of mRNA_H-akashiwo_Contig12.19.1 vs. uniprot
Match: A0A7S2BDX6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDX6_9STRA) HSP 1 Score: 138 bits (348), Expect = 6.880e-35 Identity = 67/157 (42.68%), Postives = 104/157 (66.24%), Query Frame = 2
Query: 2 ASLYFSIMTITSIGYGDITPTTAAEHWVCVLIMFLGSAVWAYVIGNASGIVATMDQDAILHNQTMDHLNQFVRERRVPRELGVKLRAYFNFSRDLARTQNNRALIDEMSPALRKAVAAKNQRWVKRVPWCRHGLSYDLVIDLVQRMQGSAYTENEAL 472
A LY+SI TITS+GYGDITP A E C + +GS +WAY+IGNA GI +++D D I H+QTMD LN F+ ++ VP+E V+LR++FN SR+LAR ++ + LID MSP L+ V+ + W+ +V + ++ +S ++++ + S + E +
Sbjct: 450 ACLYWSITTITSVGYGDITPQNADEMMFCTFFLLVGSVLWAYIIGNACGIASSLDVDNIRHHQTMDALNYFMHDQLVPKEERVELRSFFNHSRELARNESYKGLIDRMSPQLKALVSKRRAAWLYKVSYFKN-VSTKFIVNVTHELNASVFVPGEEI 605
BLAST of mRNA_H-akashiwo_Contig12.19.1 vs. uniprot
Match: A0A7S1K5Z5_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1K5Z5_9ALVE) HSP 1 Score: 132 bits (331), Expect = 1.220e-34 Identity = 69/157 (43.95%), Postives = 99/157 (63.06%), Query Frame = 2
Query: 5 SLYFSIMTITSIGYGDITPTTAAEHWVCVLIMFLGSAVWAYVIGNASGIVATMDQDAILHNQTMDHLNQFVRERRVPRELGVKLRAYFNFSRDLARTQNNRALIDEMSPALRKAVA-AKNQRWVKRVPWCRHGLSYDLVIDLVQRMQGSAYTENEAL 472
SLY+S MT+TSIGYGDI P T E+ VCV+ M +G +WAY+IGNA I+ +D + +TMD LN +R+RR+ L V+LR YF + L R ++R LID+MSP L+ VA A N+ W+++V W R + V+++ + +Q AY E L
Sbjct: 75 SLYWSFMTLTSIGYGDIVPFTYIEYGVCVVCMLIGGMIWAYIIGNAVNIITNIDIHTHEYQRTMDDLNDMMRDRRLEPNLQVRLRTYFQNAHHLQRLISHRTLIDKMSPQLQGEVALAANKPWLQKVSWLRDCTNNQFVVEIAKSLQPLAYGPEEVL 231
BLAST of mRNA_H-akashiwo_Contig12.19.1 vs. uniprot
Match: A0A0G4EBQ7_VITBC (Ion_trans domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EBQ7_VITBC) HSP 1 Score: 132 bits (331), Expect = 1.340e-32 Identity = 69/157 (43.95%), Postives = 99/157 (63.06%), Query Frame = 2
Query: 5 SLYFSIMTITSIGYGDITPTTAAEHWVCVLIMFLGSAVWAYVIGNASGIVATMDQDAILHNQTMDHLNQFVRERRVPRELGVKLRAYFNFSRDLARTQNNRALIDEMSPALRKAVA-AKNQRWVKRVPWCRHGLSYDLVIDLVQRMQGSAYTENEAL 472
SLY+S MT+TSIGYGDI P T E+ VCV+ M +G +WAY+IGNA I+ +D + +TMD LN +R+RR+ L V+LR YF + L R ++R LID+MSP L+ VA A N+ W+++V W R + V+++ + +Q AY E L
Sbjct: 398 SLYWSFMTLTSIGYGDIVPFTYIEYGVCVVCMLIGGMIWAYIIGNAVNIITNIDIHTHEYQRTMDDLNDMMRDRRLEPNLQVRLRTYFQNAHHLQRLISHRTLIDKMSPQLQGEVALAANKPWLQKVSWLRDCTNNQFVVEIAKSLQPLAYGPEEVL 554
BLAST of mRNA_H-akashiwo_Contig12.19.1 vs. uniprot
Match: A0A7S2BX63_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BX63_9STRA) HSP 1 Score: 128 bits (322), Expect = 2.140e-31 Identity = 65/157 (41.40%), Postives = 99/157 (63.06%), Query Frame = 2
Query: 5 SLYFSIMTITSIGYGDITPTTAAEHWVCVLIMFLGSAVWAYVIGNASGIVATMDQDAILHNQTMDHLNQFVRERRVPRELGVKLRAYFNFSRDLARTQNNRALIDEMSPALRKAVAAKNQRWVKRVPWCRHGLSYDLVIDLVQRMQGSAYTENEALP 475
SLY++I TITS+GYGD++P AE VC + + LGS +WAY+IGNA GI A++D + I H+QTMD LN F+ ++ + +LR++FN S+++AR +N ++LI MSP LR V+ + W+ RV + S +I LV + + E +P
Sbjct: 393 SLYWAITTITSVGYGDVSPQNPAELQVCTVFILLGSILWAYIIGNACGIAASLDVENIRHHQTMDDLNYFMMDQHLEPSQRYQLRSFFNQSKEMAREENYKSLIGRMSPTLRAVVSRRRAEWLYRVSYFSTA-SEKFLIALVMELNSDIFIPGEVIP 548
BLAST of mRNA_H-akashiwo_Contig12.19.1 vs. uniprot
Match: A0A7S2JFC4_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JFC4_9EUKA) HSP 1 Score: 116 bits (291), Expect = 1.930e-29 Identity = 65/163 (39.88%), Postives = 97/163 (59.51%), Query Frame = 2
Query: 2 ASLYFSIMTITSIGYGDITPTTAAEHWVCVLIMFLGSAVWAYVIGNASGIVATMDQDAILHNQTMDHLNQFVRERRVPRELGVKLRAYFNFSRDLARTQNNRALIDEMSPALRKAVA-AKNQRWVKRVPWCRHGLSYDLVIDLVQRMQGSA----YTENEALP 475
ASLY+SIMT+T IGYGDITP E +C L M + VW + IGN + I T++ D+IL TMD LN F+RER +PR + + +R +F+ +R + R ++ L+D+MSP L+ VA A N++W++ V + R D D + + S + +E LP
Sbjct: 49 ASLYWSIMTLTGIGYGDITPQNTTERALCSLCMMISGVVWTWSIGNVAAIATTLNPDSILFENTMDSLNYFMRERELPRAMRMTIRDFFSSARRVHRLNDDHDLLDKMSPLLQGTVALAANRKWLEAVWFFRRIDEVDGGTDFIAALAKSLVIRPFVSDERLP 211
BLAST of mRNA_H-akashiwo_Contig12.19.1 vs. uniprot
Match: A0A7S2NKK3_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NKK3_9EUKA) HSP 1 Score: 116 bits (291), Expect = 9.420e-28 Identity = 65/163 (39.88%), Postives = 97/163 (59.51%), Query Frame = 2
Query: 2 ASLYFSIMTITSIGYGDITPTTAAEHWVCVLIMFLGSAVWAYVIGNASGIVATMDQDAILHNQTMDHLNQFVRERRVPRELGVKLRAYFNFSRDLARTQNNRALIDEMSPALRKAVA-AKNQRWVKRVPWCRHGLSYDLVIDLVQRMQGSA----YTENEALP 475
ASLY+SIMT+T IGYGDITP E +C L M + VW + IGN + I T++ D+IL TMD LN F+RER +PR + + +R +F+ +R + R ++ L+D+MSP L+ VA A N++W++ V + R D D + + S + +E LP
Sbjct: 49 ASLYWSIMTLTGIGYGDITPQNTTERALCSLCMMISGVVWTWSIGNVAAIATTLNPDSILFENTMDSLNYFMRERELPRAMRMTIRDFFSSARRVHRLNDDHDLLDKMSPLLQGTVALAANRKWLEAVWFFRRIDEVDGGTDFIAALAKSLVIRPFVSDERLP 211
BLAST of mRNA_H-akashiwo_Contig12.19.1 vs. uniprot
Match: A0A7S2D3X8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D3X8_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.120e-27 Identity = 58/159 (36.48%), Postives = 97/159 (61.01%), Query Frame = 2
Query: 2 ASLYFSIMTITSIGYGDITPTTAAEHWVCVLIMFLGSAVWAYVIGNASGIVATMDQDAILHNQTMDHLNQFVRERRVPRELGVKLRAYFNFSRDLARTQNNRALIDEMSPALRKAVAAKNQRWVKRVPWCR-HGLSYDLVIDLVQRMQGSAYTENEALP 475
A+LY+S +TITS+GYGDITPT E C + + S +WAY+I NA+ IV+T D ++ TMD LN+F+ + P L +LR+YF + +A++ + ++LI+++SPAL+ V N W+ R+ + +Y+L++D+ Q + + E +P
Sbjct: 121 AALYWSFVTITSVGYGDITPTNHWEMLACTFFLLVSSLLWAYIISNATAIVSTGDPSTHQYHSTMDSLNEFMSAKTFPYPLRRRLRSYFQNRQFIAKSDSFQSLINKLSPALKVDVTELNTTWINRLAFFNGREPNYNLIVDIQQELCAFVFEATEPIP 279
BLAST of mRNA_H-akashiwo_Contig12.19.1 vs. uniprot
Match: A0A0M0J4T5_9EUKA (Cyclic nucleotide-binding protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J4T5_9EUKA) HSP 1 Score: 113 bits (283), Expect = 1.300e-26 Identity = 62/164 (37.80%), Postives = 99/164 (60.37%), Query Frame = 2
Query: 2 ASLYFSIMTITSIGYGDITPTTAAEHWVCVLIMFLGSAVWAYVIGNASGIVATMDQDAILHNQTMDHLNQFVRERRVPRELGVKLRAYFNFSRDLARTQNNRALIDEMSPALRKAVA-AKNQRWVKRVPWCRHGLSY-----DLVIDLVQRMQGSAYTENEALP 475
A+LY++ MT+T IGYGDI+P E V V++M + ++ WA VIG +G+ +T++ + H TMD LN F+RER +P+++ + LR YF +R++ N+ L+ MSP L+ VA A N W+ ++ W +GL D V L ++Q +A+ NE +P
Sbjct: 224 AALYWATMTLTGIGYGDISPQNTPEQAVAVVLMLVTASAWASVIGTIAGVYSTLNPTLVQHRNTMDTLNYFMRERHLPKDMRLMLREYFQNARNVLEGNNDEDLLAMMSPLLKGTVAIAANSIWLTQI-WFLNGLGLTRLERDFVAALAMQLQLAAFIVNERMP 386
BLAST of mRNA_H-akashiwo_Contig12.19.1 vs. uniprot
Match: A0A0M0JA66_9EUKA (Voltage-gated ion channel superfamily n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JA66_9EUKA) HSP 1 Score: 113 bits (282), Expect = 1.620e-26 Identity = 60/164 (36.59%), Postives = 102/164 (62.20%), Query Frame = 2
Query: 2 ASLYFSIMTITSIGYGDITPTTAAEHWVCVLIMFLGSAVWAYVIGNASGIVATMDQDAILHNQTMDHLNQFVRERRVPRELGVKLRAYFNFSRDLARTQNNRALIDEMSPALRKAVA-AKNQRWVKRVPWCRHGLSY-----DLVIDLVQRMQGSAYTENEALP 475
A+LY++ MT+T IGYGDI+ E V V++M + ++ WAYVIG +G+ +T++ + + + TMD LN F+RER++P+++ + LR YF+ +R + ++ L+ +MSP L+ VA A N W++++ W +GL D V L +Q SA+ +E +P
Sbjct: 254 AALYWATMTLTGIGYGDISAQNTPEQAVAVVLMLVTASAWAYVIGTIAGVYSTLNPNLVQYRNTMDTLNYFMRERQLPKDMRIMLREYFHNARHMLEANDDEDLLAKMSPLLKGTVAVAANSIWLRQI-WFLNGLGSTRLERDFVAALAMELQLSAFIVHERMP 416 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig12.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig12.19.1 >prot_H-akashiwo_Contig12.19.1 ID=prot_H-akashiwo_Contig12.19.1|Name=mRNA_H-akashiwo_Contig12.19.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=163bp REPVLQHHDHHLDRLRGHHAHDRGRALGVRADHVPGQRGVGVRDRQRLGHback to top mRNA from alignment at H-akashiwo_Contig12:875315..875805+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig12.19.1 ID=mRNA_H-akashiwo_Contig12.19.1|Name=mRNA_H-akashiwo_Contig12.19.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=491bp|location=Sequence derived from alignment at H-akashiwo_Contig12:875315..875805+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig12:875315..875805+ >mRNA_H-akashiwo_Contig12.19.1 ID=mRNA_H-akashiwo_Contig12.19.1|Name=mRNA_H-akashiwo_Contig12.19.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=489bp|location=Sequence derived from alignment at H-akashiwo_Contig12:875315..875805+ (Heterosigma akashiwo CCMP452)back to top |