mRNA_H-akashiwo_Contig12.18.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig12.18.1 vs. uniprot
Match: A0A7S3XRJ5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRJ5_HETAK) HSP 1 Score: 268 bits (686), Expect = 1.470e-85 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 2
Query: 2 AQVALLQTSVNALFWVNRLVDLTFLKDMGMNFCMTYYEESEFSGRWVKDGAKIRWRYLKGWFFVDLFSILPFDLLALLLGGDNSIEKFKVFRVXXXXXXXXXXXXXXASKIFRRWENSISISYSVLSLYKFGLLMICMGHWLACAW 439
AQVALLQTSVNALFWVNRLVDLTFLKDMGMNFCMTYYEESEFSGRWVKDGAKIRWRYLKGWFFVDLFSILPFDLLALLLGGDNSIEKFKVFRVXXXXXXXXXXXXXXASKIFRRWENSISISYSVLSLYKFGLLMICMGHWLACAW
Sbjct: 29 AQVALLQTSVNALFWVNRLVDLTFLKDMGMNFCMTYYEESEFSGRWVKDGAKIRWRYLKGWFFVDLFSILPFDLLALLLGGDNSIEKFKVFRVXXXXXXXXXXXXXXASKIFRRWENSISISYSVLSLYKFGLLMICMGHWLACAW 174
BLAST of mRNA_H-akashiwo_Contig12.18.1 vs. uniprot
Match: A0A7S1C4L1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4L1_9STRA) HSP 1 Score: 114 bits (286), Expect = 4.940e-27 Identity = 72/135 (53.33%), Postives = 97/135 (71.85%), Query Frame = 2
Query: 35 ALFWVNRLVDLTFLKDMGMNFCMTYYEESEFSGRWVKDGAKIRWRYLKGWFFVDLFSILPFDLLALLLGGDNSIEKFKVFRVXXXXXXXXXXXXXXASKIFRRWENSISISYSVLSLYKFGLLMICMGHWLACAW 439
AL+W+NRLVD +FL DMG+NF + ++++ E G+WV + +I RYLKGWF +DL SILP+D +A L G D ++ +V R XXXXXXXXXXXXXX +RWE S+ +SYS LSL KF +L++ HW+A AW
Sbjct: 174 ALWWLNRLVDFSFLIDMGVNFFLGFFDDEE--GQWVFENKRIAKRYLKGWFIIDLISILPYDDMAGLFGND-ALSNLRVLRTXXXXXXXXXXXXXXXXXXXKRWELSMDMSYSTLSLIKFVVLVMVSVHWMASAW 305
BLAST of mRNA_H-akashiwo_Contig12.18.1 vs. uniprot
Match: A0A7S0T1S8_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T1S8_9CHLO) HSP 1 Score: 113 bits (283), Expect = 2.110e-26 Identity = 72/136 (52.94%), Postives = 101/136 (74.26%), Query Frame = 2
Query: 32 NALFWVNRLVDLTFLKDMGMNFCMTYYEESEFSGRWVKDGAKIRWRYLKGWFFVDLFSILPFDLLALLLGGDNSIEKFKVFRVXXXXXXXXXXXXXXASKIFRRWENSISISYSVLSLYKFGLLMICMGHWLACAW 439
+ALFWVNRLVD+ F+ D+ MNF + Y +E+ S ++ + KI RY++G+F +DL S++PFD + +LLGG + ++ K+ R XXXXXXXXXXXXXX+ +IFRR EN++SI+YSVL L KF L I + HWLAC +
Sbjct: 251 SALFWVNRLVDILFIIDLVMNFNLIYLDEA--SNTFITNRWKISGRYVRGFFLIDLLSVMPFDSIGMLLGGGDE-KQIKILRXXXXXXXXXXXXXXXSGRIFRRLENALSINYSVLQLSKFVLSTILVSHWLACGY 383
BLAST of mRNA_H-akashiwo_Contig12.18.1 vs. uniprot
Match: A0A7S0X2L0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X2L0_9CHLO) HSP 1 Score: 110 bits (276), Expect = 1.810e-25 Identity = 69/143 (48.25%), Postives = 103/143 (72.03%), Query Frame = 2
Query: 5 QVALLQTSVNALFWVNRLVDLTFLKDMGMNFCMTYYEESEFSGRWVKDGAKIRWRYLKGWFFVDLFSILPFDLLALLLGGDNSIEKFKVFRVXXXXXXXXXXXXXXASKIFRRWENSISISYSVLSLYKFGLLMICMGHWLAC 433
+V+ L+ S+NALF++NR VD++FL DM +NF + Y+++ G+WV D KIR +Y + WFF+D+ SILPFD + +L NSI++ KV XXXXXXXXXXXXXX IFRR+E++++I Y+ L + K+ +++ HW+AC
Sbjct: 271 EVSFLEPSLNALFFINRFVDVSFLFDMLLNFYLGYFDDD--MGKWVFDLVKIRKKYFESWFFIDIVSILPFDAIGILTDS-NSIKRLKVXXXXXXXXXXXXXXXXXXXXIFRRFESAMAIDYTSLDMAKYLTIVLLTSHWMAC 410
BLAST of mRNA_H-akashiwo_Contig12.18.1 vs. uniprot
Match: A0A7S2BDX6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDX6_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.880e-25 Identity = 69/152 (45.39%), Postives = 101/152 (66.45%), Query Frame = 2
Query: 5 QVALLQTSVNA-LFWVNRLVDLTFLKDMGMNFCMTYYEESEFSGRWVKDGAKIRWRYLKGWFFVDLFSILPFDLLALLLGG--DNSIEKF----KVFRVXXXXXXXXXXXXXXASKIFRRWENSISISYSVLSLYKFGLLMICMGHWLACAW 439
+V+ L+T + LFW+N++V+L F+ DM M F + Y + G WVK I YL+ WF +D+ SILPFD LA++ G D + F K+ R+XXXXXXXXXXXXX AS++++RWE ++I Y+ ++L KF +L++ MGHW+AC W
Sbjct: 257 EVSFLETEAGSFLFWINQVVNLVFVADMVMQFFIPYKQSKAAGGHWVKGKRDITLHYLRTWFTIDIISILPFDELAMMGQGKEDAADSPFASLLKMVRIXXXXXXXXXXXXXKASRVYKRWEARVAIPYAYVALMKFSILLMMMGHWMACGW 408
BLAST of mRNA_H-akashiwo_Contig12.18.1 vs. uniprot
Match: A0A0G4H5T8_VITBC (Ion_trans domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H5T8_VITBC) HSP 1 Score: 110 bits (274), Expect = 3.400e-25 Identity = 74/147 (50.34%), Postives = 97/147 (65.99%), Query Frame = 2
Query: 5 QVALLQTSVNALFWVNRLVDLTFLKDMGMN--FCMTYYEESEFSGRWVKDGAKIRWRYLKGWFFVDLFSILPFDLLALLLGGDNSIEKFKVFRVXXXXXXXXXXXXXXASKIFRRWENSISISYSVLSLYKFGLLMICMGHWLACAW 439
+VA L+T + LF VNRL+DL FL DM N F M ++S+ RWVKD I YLKGWF +DL SILPFD+L LL +I++ K+ XXXXXXXXXXXXXX +F++ E S+S Y ++L KF +L++ GHW+AC W
Sbjct: 168 EVAFLETKWDWLFVVNRLIDLLFLVDMIFNMFFVMYLKQDSKTGARWVKDRRMIMRHYLKGWFAIDLLSILPFDVLGLLYES-KTIQRLKIXXXXXXXXXXXXXXXXXXXXVFKQMETSVSWPYGKIALVKFAVLIVVAGHWMACCW 313
BLAST of mRNA_H-akashiwo_Contig12.18.1 vs. uniprot
Match: A0A7S2IUQ3_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2IUQ3_9DINO) HSP 1 Score: 107 bits (267), Expect = 2.800e-24 Identity = 69/147 (46.94%), Postives = 100/147 (68.03%), Query Frame = 2
Query: 2 AQVALLQTSVNALFWVNRLVDLTFLKDMGMNFCMTYYEESEFSGRWVKDGAKIRWRYLKGWFFVDLFSILPFDLLALLLGGDNSIEKFKVFRVXXXXXXXXXXXXXXASKIFRRWENSISISYSVLSL-YKFGLLMICMGHWLACAW 439
A+VALL T + LF +NR++D+ F+ DM + FC+ Y ++ + R I YL+ WFF+DL SI+PFD ++L+LG +E+ KV + XXXXXXXXXXXXXXAS++F RWE S++I+Y+ L L + F + ++ HWLAC W
Sbjct: 111 AEVALLDTHFDTLFVINRIIDMVFIVDMALQFCVAYRVKTPYGSRLETRRNIIIRHYLRTWFFLDLLSIMPFDSMSLILGS-TVLERAKVMKXXXXXXXXXXXXXXXASRVFHRWETSMAINYNTLKLVFAFSVFLLA-SHWLACFW 255
BLAST of mRNA_H-akashiwo_Contig12.18.1 vs. uniprot
Match: A0A7S0S958_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0S958_9CHLO) HSP 1 Score: 107 bits (266), Expect = 3.910e-24 Identity = 68/143 (47.55%), Postives = 97/143 (67.83%), Query Frame = 2
Query: 5 QVALLQTSVNALFWVNRLVDLTFLKDMGMNFCMTYYEESEFSGRWVKDGAKIRWRYLKGWFFVDLFSILPFDLLALLLGGDNSIEKFKVFRVXXXXXXXXXXXXXXASKIFRRWENSISISYSVLSLYKFGLLMICMGHWLAC 433
+VA LQ ++ LF +NR+VDL FL D+ +NF + Y E +G+WV IR++Y++G F VD+ SILPFD++ +++ ++ KV R XXXXXXXXXXXXX A ++ RR E S SI+YS + LY FG ++ + HWLAC
Sbjct: 7 EVAFLQPKIDVLFAINRMVDLVFLGDIVINFFLMYIERE--TGKWVSQLRIIRYKYIRGTFVVDVVSILPFDVIGIVVNSP-AVSNLKVLRXXXXXXXXXXXXXXKAGRLVRRIETSFSINYSAMQLYGFGATVLVVAHWLAC 146
BLAST of mRNA_H-akashiwo_Contig12.18.1 vs. uniprot
Match: C1E5D3_MICCC (Voltage-gated ion channel superfamily n=3 Tax=Micromonas TaxID=38832 RepID=C1E5D3_MICCC) HSP 1 Score: 107 bits (266), Expect = 4.150e-24 Identity = 68/145 (46.90%), Postives = 98/145 (67.59%), Query Frame = 2
Query: 5 QVALLQTSVNALFWVNRLVDLTFLKDMGMNFCMTYYEESEFSGRWVKDGAKIRWRYLKGWFFVDLFSILPFDLLALLLGGDNSIEKFKVFRVXXXXXXXXXXXXXXASKIFRRWENSISISYSVLSLYKFGLLMICMGHWLACAW 439
+V+ + T ++ LFW+NR VD F+KD+ +NF + Y+ + G+ V + YLKGWF +D+ S+ PFDL+ALL+ +S+ + KV R XXXXXXXXXXXXXXA++IF R E +I YS+L L +F +L + HW+ACAW
Sbjct: 133 EVSFMDTKIDTLFWINRAVDGLFVKDIVLNFFVAIYDPED--GQLVFHHPTVVRSYLKGWFPIDVVSVFPFDLIALLMN-TSSVGRMKVLRXXXXXXXXXXXXXXXAARIFARLETQYNIDYSMLELVRFAVLALVTSHWMACAW 274
BLAST of mRNA_H-akashiwo_Contig12.18.1 vs. uniprot
Match: A0A024TAN5_9STRA (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAN5_9STRA) HSP 1 Score: 106 bits (264), Expect = 7.400e-24 Identity = 62/132 (46.97%), Postives = 92/132 (69.70%), Query Frame = 2
Query: 38 LFWVNRLVDLTFLKDMGMNFCMTYYEESEFSGRWVKDGAKIRWRYLKGWFFVDLFSILPFDLLALLLGGDNSIEKFKVFRVXXXXXXXXXXXXXXASKIFRRWENSISISYSVLSLYKFGLLMICMGHWLAC 433
LF +NR VD F+ D ++F + YY+E+ S WV D KI W+YL GWFF+D+ S+LPFDL+ + + +N++++ + RV XXXXXXXXXXXX + FR WE+ +SI+Y+ ++L KF +L+ HW+AC
Sbjct: 116 LFVLNRFVDACFVADAALHFFLMYYDEA--SSVWVSDRRKIAWKYLSGWFFLDVISMLPFDLVGIAID-NNTVKQLRFTRVLXXXXXXXXXXXXRGASNFRVWESKMSINYATIALAKFCVLVFMTSHWMAC 244 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig12.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig12.18.1 >prot_H-akashiwo_Contig12.18.1 ID=prot_H-akashiwo_Contig12.18.1|Name=mRNA_H-akashiwo_Contig12.18.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=147bp RPGRPATDLRECALLGQPPGGPDFPEGHGHELLHDLLRGVRVFRAVGEGRback to top mRNA from alignment at H-akashiwo_Contig12:874139..875198+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig12.18.1 ID=mRNA_H-akashiwo_Contig12.18.1|Name=mRNA_H-akashiwo_Contig12.18.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1060bp|location=Sequence derived from alignment at H-akashiwo_Contig12:874139..875198+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig12:874139..875198+ >mRNA_H-akashiwo_Contig12.18.1 ID=mRNA_H-akashiwo_Contig12.18.1|Name=mRNA_H-akashiwo_Contig12.18.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=441bp|location=Sequence derived from alignment at H-akashiwo_Contig12:874139..875198+ (Heterosigma akashiwo CCMP452)back to top |