mRNA_H-akashiwo_Contig12.11.2 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig12.11.2 vs. uniprot
Match: A0A7S3XQ28_HETAK (Superoxide dismutase [Fe] n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ28_HETAK) HSP 1 Score: 543 bits (1400), Expect = 3.450e-194 Identity = 271/272 (99.63%), Postives = 271/272 (99.63%), Query Frame = 3
Query: 57 MKIVALFLCALACVSAFQTQSMSMTESSRRDFIKATGAAALGSAAFSLAGGNSPAYADGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFWKCMGPEKESGSPSAALATAIDEAFGSMDAMKEKFNAAATGQFGSGWAWLGVKADGKLGICGTPNQDNPLMKGIGKDLAMKPILGLDVWEHAYYLQYKNRRLEYVTNFWKIVNWAQVSDNYESYASKGMGVPVEG 872
MKIVALFLCALACVSAFQTQSMSMTESSRRDFIKATGAAALGSAAFSLAGGNSPAYADGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFW CMGPEKESGSPSAALATAIDEAFGSMDAMKEKFNAAATGQFGSGWAWLGVKADGKLGICGTPNQDNPLMKGIGKDLAMKPILGLDVWEHAYYLQYKNRRLEYVTNFWKIVNWAQVSDNYESYASKGMGVPVEG
Sbjct: 1 MKIVALFLCALACVSAFQTQSMSMTESSRRDFIKATGAAALGSAAFSLAGGNSPAYADGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFWNCMGPEKESGSPSAALATAIDEAFGSMDAMKEKFNAAATGQFGSGWAWLGVKADGKLGICGTPNQDNPLMKGIGKDLAMKPILGLDVWEHAYYLQYKNRRLEYVTNFWKIVNWAQVSDNYESYASKGMGVPVEG 272
BLAST of mRNA_H-akashiwo_Contig12.11.2 vs. uniprot
Match: A0A7S3XPW3_HETAK (Superoxide dismutase [Fe] n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPW3_HETAK) HSP 1 Score: 346 bits (887), Expect = 5.420e-117 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 3
Query: 57 MKIVALFLCALACVSAFQTQSMSMTESSRRDFIKATGAAALGSAAFSLAGGNSPAYADGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFWKCMGPEKESGSPSAALATAIDEAFGSMDAMKEKFNAAATGQ 593
MKIVALFLCALACVSAFQTQSMSMTESSRRDFIKATGAAALGSAAFSLAGGNSPAYADGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFW CMGPEKESGSPSAALATAIDEAFGSMDAMKEKFNAAATGQ
Sbjct: 1 MKIVALFLCALACVSAFQTQSMSMTESSRRDFIKATGAAALGSAAFSLAGGNSPAYADGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFWNCMGPEKESGSPSAALATAIDEAFGSMDAMKEKFNAAATGQ 179
BLAST of mRNA_H-akashiwo_Contig12.11.2 vs. uniprot
Match: D7G8P0_ECTSI (Superoxide dismutase [Fe] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8P0_ECTSI) HSP 1 Score: 317 bits (811), Expect = 3.330e-104 Identity = 165/252 (65.48%), Postives = 188/252 (74.60%), Query Frame = 3
Query: 117 SMSMTESSRRDFIKATGAAALGSAAFSLAGGNSPAYADGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFWKCMGPEKESGSPSAALATAIDEAFGSMDAMKEKFNAAATGQFGSGWAWLGVKADGKLGICGTPNQDNPLMKGIGKDLAMKPILGLDVWEHAYYLQYKNRRLEYVTNFWKIVNWAQVSDNYESYASKGMGVPVEG 872
S SM SR D +KA AAA +AA + + PA+ADGPY LPDLPY+YDALEP ID+ATMKFHHDKHHA YV N NKALAGK S+LDLQ A+K G VRN+GGGHYNHC FW + + SG+PS LA AIDEAFGSMD MK +F A G FGSGWAWLG DGKL I GTPNQDNPLM+G AM PILGLDVWEHAYYL+Y+NRR EY++ FW +VNWA VS+NYE YAS+G GVPV+G
Sbjct: 55 SDSMGSLSRGDALKA--AAASAAAAGFVFSNSFPAFADGPYNLPDLPYSYDALEPYIDAATMKFHHDKHHAAYVGNANKALAGKTAP-SLLDLQKDAIKTG--VRNAGGGHYNHCLFWNTLCNHESSGAPSGTLAKAIDEAFGSMDEMKAQFGTTAAGVFGSGWAWLGCTPDGKLAITGTPNQDNPLMEGAA-GTAMVPILGLDVWEHAYYLKYQNRRPEYISAFWNVVNWAVVSENYEMYASQGKGVPVQG 300
BLAST of mRNA_H-akashiwo_Contig12.11.2 vs. uniprot
Match: A0A835ZFH9_9STRA (Superoxide dismutase [Fe] n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFH9_9STRA) HSP 1 Score: 308 bits (789), Expect = 3.090e-101 Identity = 162/246 (65.85%), Postives = 185/246 (75.20%), Query Frame = 3
Query: 138 SRRDFIKATGAAALGSAAFSLAGGNSPAYA-DGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFWKCMGPEKESGSPSAALATAIDEAFGSMDAMKEKFNAAATGQFGSGWAWLGVKADGKLGICGTPNQDNPLMKGIGKDLAMKPILGLDVWEHAYYLQYKNRRLEYVTNFWKIVNWAQVSDNYESYASKGMGVPVEG 872
SRR I+ TGAA + + + + PA A DGPY LPDLPYAY+ALEP ID+ATMKFHHDKHH Y+ N NKA+AGK+ V SILDLQ GA+KAG VRN+GGGHYNH FW + P +SG PSAAL AID +FGS DAMKEKF AAA G FGSGWAWLGV DGKL I TPNQDNPLM+G AM PILGLDVWEHAYYL+Y+NRR EY+ FW +VNWA+VS+ YE YA K GVPV+G
Sbjct: 35 SRRQAIQ-TGAATVTATGLAFLTNSVPARAEDGPYVLPDLPYAYEALEPHIDAATMKFHHDKHHLAYITNANKAVAGKEAV-SILDLQKGAIKAG--VRNAGGGHYNHSLFWTTLAPAADSGKPSAALTMAIDASFGSFDAMKEKFGAAAAGVFGSGWAWLGVTKDGKLDITTTPNQDNPLMEGAACT-AMIPILGLDVWEHAYYLKYQNRRPEYIAAFWNVVNWAKVSEYYEQYALKQEGVPVQG 275
BLAST of mRNA_H-akashiwo_Contig12.11.2 vs. uniprot
Match: A0A8J5XSB1_DIALT (Superoxide dismutase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XSB1_DIALT) HSP 1 Score: 291 bits (744), Expect = 1.540e-94 Identity = 147/217 (67.74%), Postives = 171/217 (78.80%), Query Frame = 3
Query: 213 SPAYADGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFWKCMGPEKESGSPSAALATAIDEAFGSMDAMKEKFNAAATGQFGSGWAWLGVKADGKLGICGTPNQDNPLMKGIGKDLAMKPILGLDVWEHAYYLQYKNRRLEYVTNFWKIVNWAQVSDNYESYASKGMGVP 863
+PA A+ YTLPDLPY Y+ALEP ID+ATM+FHHDKHHATYVANVNKAL GK SIL+LQ A+ AGGAVRNSGGGHYNH FW+ MGP G P+ ALA IDEAFGS D KE+F+A + G+FGSGW WLGVK DGKL I TPNQDNPLM G G + M PILGLDVWEHAYYL+Y+NRR EY+++++ +VNW +V+ NYE YASKG GVP
Sbjct: 55 APALAE--YTLPDLPYDYEALEPYIDAATMRFHHDKHHATYVANVNKALEGKPAK-SILELQKDAISAGGAVRNSGGGHYNHALFWEEMGPATGKG-PTGALAAKIDEAFGSFDKFKEEFSAKSAGRFGSGWCWLGVKPDGKLAIDTTPNQDNPLMDG-GCETKMVPILGLDVWEHAYYLKYQNRRPEYISSWFNVVNWEKVAFNYEKYASKGQGVP 266
BLAST of mRNA_H-akashiwo_Contig12.11.2 vs. uniprot
Match: L1K0Q9_GUITC (Superoxide dismutase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K0Q9_GUITC) HSP 1 Score: 271 bits (692), Expect = 1.620e-86 Identity = 133/215 (61.86%), Postives = 162/215 (75.35%), Query Frame = 3
Query: 225 ADGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFWKCMGPEKESGSPSAALATAIDEAFGSMDAMKEKFNAAATGQFGSGWAWLGVKADGKLGICGTPNQDNPLMKGIGKDLAMKPILGLDVWEHAYYLQYKNRRLEYVTNFWKIVNWAQVSDNYESYASKGMGVPVE 869
A+G ++LP LPY Y +LEP ID TMK HHDKH Y+ N+NKAL GK + D+Q A+KAG A+RN+GGG+YNH F+K MGP SG PSAAL AID +FGSMD MKE+FNAAA +FGSGWAWLGV +GKL I TPNQDNPLM+G + M P+LGLDVWEHAYYL+Y+NRR EY+TN+W +VNW VS+NYE +A+KG +PVE
Sbjct: 66 AEGAFSLPALPYDYKSLEPYIDEETMKLHHDKHFNAYLTNLNKALEGKPAA-KLTDIQKEAIKAGPAIRNNGGGYYNHALFFKEMGPAANSGKPSAALQKAIDASFGSMDKMKEEFNAAAAKRFGSGWAWLGVTPEGKLAITSTPNQDNPLMEGC-EGQKMIPVLGLDVWEHAYYLKYQNRRPEYITNWWSVVNWEAVSNNYEKFAAKG--IPVE 276
BLAST of mRNA_H-akashiwo_Contig12.11.2 vs. uniprot
Match: A0A7S2RQL5_9STRA (Superoxide dismutase [Fe] n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RQL5_9STRA) HSP 1 Score: 259 bits (663), Expect = 3.010e-82 Identity = 156/278 (56.12%), Postives = 185/278 (66.55%), Query Frame = 3
Query: 54 SMKIVALFLCALACVSAFQTQSMSMTES--SRRDFIKATGAAALGSAAFSLAGGNSPAYADGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFWKCMGPEKESGS--PSAALATAIDEAFGSMDAMKEKFNA-AATGQ-FGSGWAWLGVKADG-KLGICGTPNQDNPLMKGIGKDLAMKPILGLDVWEHAYYLQYKNRRLEYVTNFWKIVNWAQVSDNYESYASKGMGVPV 866
S I AL + + A SA T T S SRR+ +K+ A A AA PA+A G Y LPDLPYA++ALEP ID+ TMK HHDKHHATYVAN+NKA GKD V ILDL A AL+AG VRNSGGGHYNH FFW+ M P ++ PS+ L+ ID++FGSMD MK KF A AA G FGSGW W+ V A G KL I GT NQDNPLMKG+ D M PILGLDVWEHAYYL+Y+NRR EYV+N+W +VNW +++ N+ GV V
Sbjct: 4 SATISALLVGSAAAWSAPMTMKAGETSSDLSRRNILKSGSAFAAAVAA--------PAFA-GAYELPDLPYAFEALEPYIDTPTMKIHHDKHHATYVANINKAREGKDDV-PILDLMADALEAGPGVRNSGGGHYNHAFFWEEMAPADKAAKTKPSSDLSAMIDKSFGSMDDMKAKFEAQAAPGAVFGSGWVWVCVNAKGDKLSIVGTANQDNPLMKGV-TDEVMFPILGLDVWEHAYYLKYQNRRPEYVSNWWNVVNWDKINSNFAYVVENHAGVSV 270
BLAST of mRNA_H-akashiwo_Contig12.11.2 vs. uniprot
Match: A0A7S1DDM0_HEMAN (Superoxide dismutase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DDM0_HEMAN) HSP 1 Score: 260 bits (665), Expect = 3.050e-82 Identity = 132/214 (61.68%), Postives = 152/214 (71.03%), Query Frame = 3
Query: 231 GPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFWKCMGPEKESGSPSAALATAIDEAFGSMDAMKEKFNAAATGQFGSGWAWLGVKADGKLGICGTPNQDNPLMKGIGKDLAMKPILGLDVWEHAYYLQYKNRRLEYVTNFWKIVNWAQVSDNYESYASKGMGVPVEG 872
GPY LP LPY Y ALEP ID TMK HHDKHH YV NVNKAL GKD SI LQ A+K+ A+RN+GGGHYNH FW + P SG PSAAL AIDEAFGS D M E F+ A +FGSGWAWLGV +GKL I TPNQDNPLM+G G M P+LGLDVWEHAYYL+Y+N+R EY+ F+ ++NW VS NY +A KG+ VPV+G
Sbjct: 82 GPYKLPPLPYDYAALEPAIDEMTMKIHHDKHHQAYVNNVNKALEGKDAP-SITALQKDAMKSP-ALRNNGGGHYNHALFWSTLSPVASSGKPSAALQKAIDEAFGSTDKMVEAFSGCAAKRFGSGWAWLGVSPEGKLVIDSTPNQDNPLMEGAGC-AKMIPVLGLDVWEHAYYLKYQNKRPEYIKAFFSVINWGVVSKNYADFAVKGLPVPVQG 292
BLAST of mRNA_H-akashiwo_Contig12.11.2 vs. uniprot
Match: A0A6V0Z098_9STRA (Superoxide dismutase [Fe] n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V0Z098_9STRA) HSP 1 Score: 259 bits (662), Expect = 3.500e-82 Identity = 150/263 (57.03%), Postives = 179/263 (68.06%), Query Frame = 3
Query: 99 SAFQTQSM-SMTESSRRDFIKATGAAALGSAAFSLAGGNSPAYADGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFWKCMGP--EKESGSPSAALATAIDEAFGSMDAMKEKFNA-AATGQ-FGSGWAWLGVKADGKLGICGTPNQDNPLMKGIGKDLAMKPILGLDVWEHAYYLQYKNRRLEYVTNFWKIVNWAQVSDNYESYASKGMGVPVEG 872
SA+ T +M + T +SRR+ ++ A A AA PA A+ Y +PDL Y ++ALEP ID+ TMK HHDKHH TYVAN+NKA GKD V IL+LQ AL+AG A RNSGGGHYNH FFW M P E + PSA L AID+AFGS+D MK KF A AA G FGSGW W+ +DG L + GTPNQDNPLMKG+ D M PILGLDVWEHAYYL+Y+NRR EYV+N+W +VNW +VS+NY GVPV G
Sbjct: 14 SAWSTLTMKAQTPNSRRNILQKGAAIATAIAA--------PAAANA-YAVPDLLYPFEALEPYIDAPTMKIHHDKHHGTYVANINKATEGKDEV-DILELQLNALEAGPAYRNSGGGHYNHAFFWDEMAPPDEAKKTKPSAELEAAIDKAFGSLDDMKAKFEAQAAPGAVFGSGWVWICASSDG-LKLVGTPNQDNPLMKGV-TDEVMFPILGLDVWEHAYYLKYQNRRPEYVSNWWNVVNWDKVSENYAYVTENKAGVPVRG 264
BLAST of mRNA_H-akashiwo_Contig12.11.2 vs. uniprot
Match: A0A7S0L727_9EUKA (Superoxide dismutase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L727_9EUKA) HSP 1 Score: 259 bits (663), Expect = 6.950e-82 Identity = 133/224 (59.38%), Postives = 160/224 (71.43%), Query Frame = 3
Query: 198 LAGGNSPAYA-DGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFWKCMGPEKESGSPSAALATAIDEAFGSMDAMKEKFNAAATGQFGSGWAWLGVKADGKLGICGTPNQDNPLMKGIGKDLAMKPILGLDVWEHAYYLQYKNRRLEYVTNFWKIVNWAQVSDNYESYASKGMGVPV 866
L G SPA A D ++LP LPYAYDALEP +D+ATMKFHHD HH Y+ N+NKA+AGK S++ L GA A + N+GGGHYNHC FW MGP K G+P+ LAT ID AFGS D K KF+AAA G FGSGWAWL V DG + I TPNQDNPLM G + + PILG+DVWEHAYYL+Y+NRR EY+T F+ +VNWA+V + Y+ YASKG VP+
Sbjct: 78 LLGAQSPALAEDAMFSLPPLPYAYDALEPHVDAATMKFHHDFHHQAYINNLNKAMAGKPSA-SLVSLMPGAKAA--KLNNAGGGHYNHCLFWTTMGP-KCGGAPTGTLATKIDAAFGSYDEFKAKFSAAAAGVFGSGWAWLAVAKDGSVQIVTTPNQDNPLMDG-ATEPGLVPILGIDVWEHAYYLKYQNRRPEYITAFYNVVNWAKVGEYYDEYASKGEPVPL 296 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig12.11.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig12.11.2 >prot_H-akashiwo_Contig12.11.2 ID=prot_H-akashiwo_Contig12.11.2|Name=mRNA_H-akashiwo_Contig12.11.2|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=273bp MKIVALFLCALACVSAFQTQSMSMTESSRRDFIKATGAAALGSAAFSLAGback to top mRNA from alignment at H-akashiwo_Contig12:741792..744764+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig12.11.2 ID=mRNA_H-akashiwo_Contig12.11.2|Name=mRNA_H-akashiwo_Contig12.11.2|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2973bp|location=Sequence derived from alignment at H-akashiwo_Contig12:741792..744764+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig12:741792..744764+ >mRNA_H-akashiwo_Contig12.11.2 ID=mRNA_H-akashiwo_Contig12.11.2|Name=mRNA_H-akashiwo_Contig12.11.2|organism=Heterosigma akashiwo CCMP452|type=CDS|length=819bp|location=Sequence derived from alignment at H-akashiwo_Contig12:741792..744764+ (Heterosigma akashiwo CCMP452)back to top |