mRNA_H-akashiwo_Contig1198.9.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1198.9.1 vs. uniprot
Match: A0A3C1C7C7_9SPIO (Maebl n=4 Tax=Spirochaetes TaxID=203691 RepID=A0A3C1C7C7_9SPIO) HSP 1 Score: 130 bits (328), Expect = 3.080e-34 Identity = 57/101 (56.44%), Postives = 78/101 (77.23%), Query Frame = 2
Query: 260 IKEESPRKLALLIDADNTTPHVMDELIHEVSKYGTVKIKRIYGDWGSPNLQGWRTKIMEHALVPVQQMAYVKGKGATDSALIIDCMDIFYTEDCAGFVLVS 562
+K + KLA+LIDADNT P ++D L+ E++KYG +KRIYGDW +PNL+GW+ +++E+A+ PVQQ AY GK +TDSA+IID MD+ YTE+ GF LVS
Sbjct: 1 MKSDPQLKLAVLIDADNTQPTIIDGLLAEIAKYGVASVKRIYGDWTNPNLRGWKERLLEYAIQPVQQFAYTTGKNSTDSAMIIDAMDLLYTENLDGFCLVS 101
BLAST of mRNA_H-akashiwo_Contig1198.9.1 vs. uniprot
Match: A0A7C4QDA4_9SPIR (NYN domain-containing protein n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A7C4QDA4_9SPIR) HSP 1 Score: 130 bits (328), Expect = 3.390e-34 Identity = 56/102 (54.90%), Postives = 79/102 (77.45%), Query Frame = 2
Query: 257 FIKEESPRKLALLIDADNTTPHVMDELIHEVSKYGTVKIKRIYGDWGSPNLQGWRTKIMEHALVPVQQMAYVKGKGATDSALIIDCMDIFYTEDCAGFVLVS 562
+K ES KLA+LIDADNT P +++ L+ E++KYG +KRIYGDW +PNL+GW+ +++E+A+ PVQQ +Y GK +TDSA+IID MD+ YTE+ GF +VS
Sbjct: 1 MMKSESQLKLAVLIDADNTQPSIIEGLLAEIAKYGIASVKRIYGDWTNPNLRGWKERLLEYAIQPVQQFSYTTGKNSTDSAMIIDAMDLLYTENLDGFCIVS 102
BLAST of mRNA_H-akashiwo_Contig1198.9.1 vs. uniprot
Match: A0A3D0ZDF6_9SPIR (Maebl n=1 Tax=Treponema sp. TaxID=166 RepID=A0A3D0ZDF6_9SPIR) HSP 1 Score: 130 bits (327), Expect = 6.530e-34 Identity = 57/105 (54.29%), Postives = 79/105 (75.24%), Query Frame = 2
Query: 248 SGSFIKEESPRKLALLIDADNTTPHVMDELIHEVSKYGTVKIKRIYGDWGSPNLQGWRTKIMEHALVPVQQMAYVKGKGATDSALIIDCMDIFYTEDCAGFVLVS 562
+G+ E S KLA+LIDADNT P +++ L++EV+KYG +KRIYGDW SPNL+ W+ +++EHA+ P+QQ +Y GK ATDSA+IID MD+ Y+E GF +VS
Sbjct: 12 AGNHQVETSQAKLAVLIDADNTQPTIIEGLLNEVAKYGVASVKRIYGDWTSPNLRSWKDRLLEHAIQPIQQFSYTTGKNATDSAMIIDAMDLLYSEKLDGFCIVS 116
BLAST of mRNA_H-akashiwo_Contig1198.9.1 vs. uniprot
Match: A0A3P3XNL0_9SPIR (HTH OST-type domain-containing protein n=4 Tax=Spirochaetales TaxID=136 RepID=A0A3P3XNL0_9SPIR) HSP 1 Score: 129 bits (323), Expect = 1.710e-33 Identity = 55/101 (54.46%), Postives = 78/101 (77.23%), Query Frame = 2
Query: 260 IKEESPRKLALLIDADNTTPHVMDELIHEVSKYGTVKIKRIYGDWGSPNLQGWRTKIMEHALVPVQQMAYVKGKGATDSALIIDCMDIFYTEDCAGFVLVS 562
+K + KLA+L+DADNT P ++D L+ E++KYG +KRIYGDW +PNL+GW+ +++E+A+ PVQQ AY GK +TDSA+IID MD+ YTE+ GF +VS
Sbjct: 1 MKTDPQLKLAVLVDADNTQPAIIDGLLAEIAKYGIASVKRIYGDWTNPNLRGWKERLLEYAIQPVQQFAYTTGKNSTDSAMIIDAMDLLYTENLDGFCIVS 101
BLAST of mRNA_H-akashiwo_Contig1198.9.1 vs. uniprot
Match: E1RBK0_SEDSS (HTH OST-type domain-containing protein n=2 Tax=Sediminispirochaeta TaxID=1911556 RepID=E1RBK0_SEDSS) HSP 1 Score: 128 bits (322), Expect = 1.940e-33 Identity = 56/101 (55.45%), Postives = 77/101 (76.24%), Query Frame = 2
Query: 260 IKEESPRKLALLIDADNTTPHVMDELIHEVSKYGTVKIKRIYGDWGSPNLQGWRTKIMEHALVPVQQMAYVKGKGATDSALIIDCMDIFYTEDCAGFVLVS 562
I+E+S +KLA+LIDADNT +++ L+ EV+KYG +KRIYGDW SPNL+ W+ ++EH+++P+QQ Y GK ATDSA+IID MD+ YTE GF +VS
Sbjct: 5 IEEQSQQKLAVLIDADNTQGSIVEGLLAEVAKYGIASVKRIYGDWTSPNLRSWKEVLLEHSIIPIQQFGYTSGKNATDSAMIIDAMDLLYTERFDGFCIVS 105
BLAST of mRNA_H-akashiwo_Contig1198.9.1 vs. uniprot
Match: A0A0F3KI88_9GAMM (Maebl n=1 Tax=Luteibacter yeojuensis TaxID=345309 RepID=A0A0F3KI88_9GAMM) HSP 1 Score: 127 bits (319), Expect = 4.680e-33 Identity = 55/101 (54.46%), Postives = 76/101 (75.25%), Query Frame = 2
Query: 260 IKEESPRKLALLIDADNTTPHVMDELIHEVSKYGTVKIKRIYGDWGSPNLQGWRTKIMEHALVPVQQMAYVKGKGATDSALIIDCMDIFYTEDCAGFVLVS 562
+ ++ KLA+L+DADN P ++D L+ EV+KYGT +KRIYGDW SP+L GW+T ++EH++ P+QQ AY GK ATDSA+IID MD+ Y+E GF +VS
Sbjct: 1 MANDNTDKLAVLVDADNARPAIVDGLLAEVAKYGTAHVKRIYGDWTSPHLNGWKTALLEHSIQPIQQFAYTSGKNATDSAMIIDAMDLLYSERFDGFCIVS 101
BLAST of mRNA_H-akashiwo_Contig1198.9.1 vs. uniprot
Match: A0A6M1T7X8_9BACT (NYN domain-containing protein n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1T7X8_9BACT) HSP 1 Score: 126 bits (317), Expect = 9.770e-33 Identity = 53/101 (52.48%), Postives = 76/101 (75.25%), Query Frame = 2
Query: 260 IKEESPRKLALLIDADNTTPHVMDELIHEVSKYGTVKIKRIYGDWGSPNLQGWRTKIMEHALVPVQQMAYVKGKGATDSALIIDCMDIFYTEDCAGFVLVS 562
+ E+ RKLA+LIDADN P +++ L+ E++KYGT +KRIYGDW SP+L+ W+ +++H++ P+QQ Y +GK ATDSA+IID MD+ YTE GF L+S
Sbjct: 1 MDNETTRKLAVLIDADNAQPSIIEGLLAEIAKYGTANVKRIYGDWTSPHLKSWKDALLQHSIQPIQQFGYTRGKNATDSAMIIDAMDLLYTEKFDGFCLIS 101
BLAST of mRNA_H-akashiwo_Contig1198.9.1 vs. uniprot
Match: A0A1K1QKI2_9GAMM (OST-HTH/LOTUS domain-containing protein n=4 Tax=Rhodanobacteraceae TaxID=1775411 RepID=A0A1K1QKI2_9GAMM) HSP 1 Score: 126 bits (317), Expect = 9.770e-33 Identity = 55/94 (58.51%), Postives = 72/94 (76.60%), Query Frame = 2
Query: 281 KLALLIDADNTTPHVMDELIHEVSKYGTVKIKRIYGDWGSPNLQGWRTKIMEHALVPVQQMAYVKGKGATDSALIIDCMDIFYTEDCAGFVLVS 562
KLA+LIDADN P ++D L+ EV+KYGT +KRIYGDW PNL GW+T +++H++ P+QQ AY GK ATDSA+IID MD+ Y+E GF +VS
Sbjct: 7 KLAVLIDADNARPAIVDGLLAEVAKYGTAHVKRIYGDWTGPNLNGWKTALLDHSIQPIQQFAYTSGKNATDSAMIIDAMDLLYSERFDGFCIVS 100
BLAST of mRNA_H-akashiwo_Contig1198.9.1 vs. uniprot
Match: A0A7T8BB94_9SPIR (NYN domain-containing protein n=1 Tax=Breznakiella homolactica TaxID=2798577 RepID=A0A7T8BB94_9SPIR) HSP 1 Score: 126 bits (317), Expect = 1.380e-32 Identity = 56/99 (56.57%), Postives = 76/99 (76.77%), Query Frame = 2
Query: 266 EESPRKLALLIDADNTTPHVMDELIHEVSKYGTVKIKRIYGDWGSPNLQGWRTKIMEHALVPVQQMAYVKGKGATDSALIIDCMDIFYTEDCAGFVLVS 562
E S KLA+LIDADNT P +++ L++EV+KYG +KRIYGDW S NL+ W+ +++E+A+ P+QQ +Y GK ATDSALIID MD+ YTE+ GF +VS
Sbjct: 12 ESSQAKLAVLIDADNTQPAIIEGLLNEVAKYGIASVKRIYGDWTSTNLRSWKDRLLEYAIQPIQQFSYTTGKNATDSALIIDAMDLLYTENLNGFCIVS 110
BLAST of mRNA_H-akashiwo_Contig1198.9.1 vs. uniprot
Match: A0A661EUB0_9GAMM (Maebl n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661EUB0_9GAMM) HSP 1 Score: 125 bits (314), Expect = 2.610e-32 Identity = 54/98 (55.10%), Postives = 74/98 (75.51%), Query Frame = 2
Query: 269 ESPRKLALLIDADNTTPHVMDELIHEVSKYGTVKIKRIYGDWGSPNLQGWRTKIMEHALVPVQQMAYVKGKGATDSALIIDCMDIFYTEDCAGFVLVS 562
ES KLA+LIDADN P ++D L+ E++ YG +KRIYGDW +PNL+GW+ +++H++ P+QQ AY KGK ATDSA+IID MD+ YT + GF +VS
Sbjct: 2 ESTDKLAVLIDADNAQPSIVDSLLTEIANYGVASVKRIYGDWTAPNLKGWKEVLLDHSIQPMQQFAYTKGKNATDSAMIIDAMDLLYTGNFNGFCIVS 99 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1198.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1198.9.1 >prot_H-akashiwo_Contig1198.9.1 ID=prot_H-akashiwo_Contig1198.9.1|Name=mRNA_H-akashiwo_Contig1198.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=177bp MQPRRPQLRRALLIGVFAAVAQLERGTGFRFSGRVEPSTATPSIILSTVRback to top mRNA from alignment at H-akashiwo_Contig1198:335478..336235- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1198.9.1 ID=mRNA_H-akashiwo_Contig1198.9.1|Name=mRNA_H-akashiwo_Contig1198.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=758bp|location=Sequence derived from alignment at H-akashiwo_Contig1198:335478..336235- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1198:335478..336235- >mRNA_H-akashiwo_Contig1198.9.1 ID=mRNA_H-akashiwo_Contig1198.9.1|Name=mRNA_H-akashiwo_Contig1198.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=531bp|location=Sequence derived from alignment at H-akashiwo_Contig1198:335478..336235- (Heterosigma akashiwo CCMP452)back to top |