mRNA_H-akashiwo_Contig1190.9.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1190.9.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 311 bits (796), Expect = 3.240e-100 Identity = 150/152 (98.68%), Postives = 150/152 (98.68%), Query Frame = 1
Query: 1 VLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYTSRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWFMTLMEFMYNTQYRKGKLMAPADALSRL 456
VLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAY SRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARW MTLMEFMYNTQYRKGKLMAPADALSRL
Sbjct: 363 VLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTLMEFMYNTQYRKGKLMAPADALSRL 514
BLAST of mRNA_H-akashiwo_Contig1190.9.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 285 bits (728), Expect = 3.930e-92 Identity = 136/138 (98.55%), Postives = 136/138 (98.55%), Query Frame = 1
Query: 1 VLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYTSRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWFMTLMEFMYNTQYR 414
VLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAY SRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARW MTLMEFMYNTQYR
Sbjct: 363 VLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYASRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWLMTLMEFMYNTQYR 500
BLAST of mRNA_H-akashiwo_Contig1190.9.1 vs. uniprot
Match: A0A8J6LJE6_TENMO (RT_RNaseH_2 domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LJE6_TENMO) HSP 1 Score: 158 bits (399), Expect = 8.110e-46 Identity = 80/150 (53.33%), Postives = 103/150 (68.67%), Query Frame = 1
Query: 7 WDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYTSRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWFMTLMEFMYNTQYRKGKLMAPADALSRL 456
W + + AFQ+IKD+L SAPVL P + KPF+++TDAS TGLGA+L Q R IAY SR + E NYS TE ECL V++AL++FR YV G FT+VTDH SL L R+K+P G+ ARW + L +F ++ +RKGKL DALSRL
Sbjct: 19 WTPEAQEAFQKIKDALVSAPVLSSPDFSKPFVIQTDASDTGLGAVLTQDLDGDERVIAYASRSLTKAERNYSVTERECLAVLFALEKFRPYVEGTHFTIVTDHYSLLWLNRMKDPAGKLARWSVKLNQFSFDLVHRKGKLNVVPDALSRL 168
BLAST of mRNA_H-akashiwo_Contig1190.9.1 vs. uniprot
Match: A0A8J6HMZ1_TENMO (Integrase catalytic domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HMZ1_TENMO) HSP 1 Score: 157 bits (398), Expect = 4.820e-43 Identity = 80/150 (53.33%), Postives = 102/150 (68.00%), Query Frame = 1
Query: 7 WDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYTSRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWFMTLMEFMYNTQYRKGKLMAPADALSRL 456
W + + AFQ+IKD+L SAPVL P + KPF+++TDAS TGLGA+L Q R IAY SR + E NYS TE ECL V++AL++FR YV G FT+VTDH SL L R+K+P G+ ARW + L +F + +RKGKL DALSRL
Sbjct: 19 WTPEAQEAFQKIKDALVSAPVLSSPDFSKPFVIQTDASDTGLGAVLTQDLDGDERVIAYASRSLTKAERNYSVTERECLAVLFALEKFRPYVEGTHFTIVTDHYSLLWLNRMKDPAGKLARWSVKLNQFSFELVHRKGKLNVVPDALSRL 168
BLAST of mRNA_H-akashiwo_Contig1190.9.1 vs. uniprot
Match: A0A8J6HPD2_TENMO (RNA-directed DNA polymerase n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HPD2_TENMO) HSP 1 Score: 158 bits (400), Expect = 2.630e-42 Identity = 80/150 (53.33%), Postives = 103/150 (68.67%), Query Frame = 1
Query: 7 WDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYTSRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWFMTLMEFMYNTQYRKGKLMAPADALSRL 456
W + + AFQ+IKD+L SAPVL P + KPF+++TDAS TGLGA+L Q R IAY SR + E NYS TE ECL V++AL++FR YV G FT+VTDH SL L R+K+P G+ ARW + L +F ++ +RKGKL DALSRL
Sbjct: 52 WTPEAQEAFQKIKDALVSAPVLSSPDFSKPFVIQTDASNTGLGAVLTQDLDGDERVIAYASRSLTKAERNYSVTERECLAVLFALEKFRPYVEGTHFTIVTDHYSLLWLNRMKDPAGKLARWSVKLNQFSFDLVHRKGKLNVVPDALSRL 201
BLAST of mRNA_H-akashiwo_Contig1190.9.1 vs. uniprot
Match: A0A8J6H9C8_TENMO (RNA-directed DNA polymerase n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6H9C8_TENMO) HSP 1 Score: 156 bits (395), Expect = 2.330e-41 Identity = 79/150 (52.67%), Postives = 103/150 (68.67%), Query Frame = 1
Query: 7 WDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYTSRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWFMTLMEFMYNTQYRKGKLMAPADALSRL 456
W + + AFQ+IKD+L SAPVL P + KPF+++TDAS TGLGA+L Q R IAY SR + E NYS T+ ECL V++AL++FR YV G FT+VTDH SL L R+K+P G+ ARW + L +F ++ +RKGKL DALSRL
Sbjct: 787 WTPEAQEAFQKIKDALVSAPVLSSPDFSKPFVIQTDASDTGLGAVLTQDLDGDERVIAYASRSLTKAERNYSVTKRECLAVLFALEKFRPYVEGTHFTIVTDHYSLLWLNRMKDPAGKLARWSVKLNQFSFDLVHRKGKLNVVPDALSRL 936
BLAST of mRNA_H-akashiwo_Contig1190.9.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK) HSP 1 Score: 149 bits (376), Expect = 2.580e-41 Identity = 64/98 (65.31%), Postives = 82/98 (83.67%), Query Frame = 1
Query: 1 VLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYTSRLCSPTEANYSATELECLGVIYALQQFRCYVMGRE 294
V W DDCEWAFQ +KD+LT+AP+L++P ++K F +ETDASK GLGAIL Q T G +P+AY SR+C+ EANYSATELECLGVI+ +QQFRCY++GR+
Sbjct: 225 VEWTDDCEWAFQNLKDTLTTAPILIFPNFNKEFTIETDASKHGLGAILSQDTTEGRKPVAYASRVCNSAEANYSATELECLGVIFGIQQFRCYILGRQ 322
BLAST of mRNA_H-akashiwo_Contig1190.9.1 vs. uniprot
Match: A0A0J7JYT7_LASNI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7JYT7_LASNI) HSP 1 Score: 153 bits (387), Expect = 4.470e-41 Identity = 74/150 (49.33%), Postives = 104/150 (69.33%), Query Frame = 1
Query: 4 LWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYTSRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWFMTLMEFMYNTQYRKGKLMAPADALSR 453
+W + AF +K++LTSAPVL P +++PF ++TDAS GLGA+L QQ G R IAY SR +P E NYSATELECL V++ +++ R Y+ G FT+VTDH+SL L+R+++P+GR +RW L + + +YR+G L ADALSR
Sbjct: 20 VWTEAANTAFCRLKEALTSAPVLACPDFNQPFTLQTDASAHGLGAVLTQQLDEGERVIAYASRTLNPAERNYSATELECLAVVWGIRRMRDYLEGYRFTVVTDHQSLRWLQRLESPSGRLSRWLFELQSYDFEIKYRRGALNQVADALSR 169
BLAST of mRNA_H-akashiwo_Contig1190.9.1 vs. uniprot
Match: A0A6A3QF82_9STRA (RT_RNaseH domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3QF82_9STRA) HSP 1 Score: 144 bits (363), Expect = 9.700e-41 Identity = 74/149 (49.66%), Postives = 99/149 (66.44%), Query Frame = 1
Query: 7 WDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYTSRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWFMTLMEFMYNTQYRKGKLMAPADALSR 453
W E AF K L++ PVL+YP +D PF + T+ASK GLGA+L Q RG +P+AY S++ SP ANYS +ELECL V++A++ FR ++ GR FT+VTDH +L+ L K P GR RW +TL E+ ++ YR GK ADALSR
Sbjct: 16 WGAAQEEAFTWAKAWLSTKPVLVYPNYDLPFNLTTEASKAGLGAVLSQDQGRGDQPVAYASKVNSPAVANYSISELECLAVVWAVRLFRSHLYGRRFTIVTDHVALKWLMTTKEPAGRLPRWALTLQEYDFDIVYRPGKENHVADALSR 164
BLAST of mRNA_H-akashiwo_Contig1190.9.1 vs. uniprot
Match: A0A6H5J3R6_9HYME (RNA-directed DNA polymerase n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5J3R6_9HYME) HSP 1 Score: 146 bits (368), Expect = 2.640e-40 Identity = 71/150 (47.33%), Postives = 99/150 (66.00%), Query Frame = 1
Query: 4 LWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQQTQRGTRPIAYTSRLCSPTEANYSATELECLGVIYALQQFRCYVMGREFTLVTDHKSLEDLKRIKNPTGRRARWFMTLMEFMYNTQYRKGKLMAPADALSR 453
+W D E AF +K SL+ APVL+ P +DK F ++TDAS +GA+L Q+ + G P+ Y SR+ + E NY+ TE ECL V++A+++FR YV G F +VTDH++L L+ K+P GR ARW + LME+ + YRKG L DALSR
Sbjct: 30 VWGSDQEQAFATLKQSLSEAPVLVRPDFDKEFAIQTDASDYAIGAVLTQEREDGEHPVYYISRVLTSAERNYTVTEKECLAVLWAIEKFRPYVEGYHFRVVTDHRALSWLRNFKDPQGRVARWALKLMEYDFEIVYRKGSLHYVPDALSR 179 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1190.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1190.9.1 >prot_H-akashiwo_Contig1190.9.1 ID=prot_H-akashiwo_Contig1190.9.1|Name=mRNA_H-akashiwo_Contig1190.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=152bp VLWDDDCEWAFQEIKDSLTSAPVLMYPRWDKPFIVETDASKTGLGAILLQback to top mRNA from alignment at H-akashiwo_Contig1190:131236..131691- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1190.9.1 ID=mRNA_H-akashiwo_Contig1190.9.1|Name=mRNA_H-akashiwo_Contig1190.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=456bp|location=Sequence derived from alignment at H-akashiwo_Contig1190:131236..131691- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1190:131236..131691- >mRNA_H-akashiwo_Contig1190.9.1 ID=mRNA_H-akashiwo_Contig1190.9.1|Name=mRNA_H-akashiwo_Contig1190.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=456bp|location=Sequence derived from alignment at H-akashiwo_Contig1190:131236..131691- (Heterosigma akashiwo CCMP452)back to top |