mRNA_H-akashiwo_Contig119.23.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig119.23.1
Unique NamemRNA_H-akashiwo_Contig119.23.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig119.23.1 vs. uniprot
Match: A0A7S3XNC3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNC3_HETAK)

HSP 1 Score: 777 bits (2006), Expect = 3.460e-283
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 1 
Query:    1 SSQLNMAEGDISRSEFITKSAAVGGTVAASGLWTPSVFAATEKRKAWEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGPNKGFVLGSDGVLLRYAAGDA 1125
            SSQLNMAEGDISRSEFITKSAAVGGTVAASGLWTPSVFAATEKRKAWEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGPNKGFVLGSDGVLLRYAAGDA
Sbjct:   68 SSQLNMAEGDISRSEFITKSAAVGGTVAASGLWTPSVFAATEKRKAWEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGPNKGFVLGSDGVLLRYAAGDA 442
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BLAST of mRNA_H-akashiwo_Contig119.23.1 vs. uniprot
Match: A0A7S2XVG6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVG6_9STRA)

HSP 1 Score: 512 bits (1318), Expect = 7.820e-179
Identity = 247/364 (67.86%), Postives = 291/364 (79.95%), Query Frame = 1 
Query:   19 AEGDISRSEFITKSAAVGGTVAASGLWTPSVFAATEKRKAWEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGPNKGFVLGSDGVLLRY 1110
            A G   R EF+  SA V    AA      S  AA  + +AW  VELP+  TLFD+DFDTK+P+HGFLVG+KGTFLETF+ G++WGVRTFS LD +EEI YRFEKVSFLDGEAWIIGKP ILLH++D+G++WERIPLSPKLPGEP  I+ATG E AEMTTS GAIYYT N ARN+KAQ+KETIDATLNR+SSSGVSGAS+F+G+I    RD  G YLAVSSRGNFYLTW PG DFWIPHNRGT RRIQ MGF+QDD+  G+WM+LNGG+LQ+++ GQ+++  +D +FK A IK+GGYGI D  WKDE EVWAVGGGGTM+ S DGG  F F+++AD IPGNLY  KFF   KGFVLGSDG+LL+Y
Sbjct:   52 AAGSADRREFLVNSAKVATAGAAISALPGSASAA--RSQAWTAVELPASTTLFDLDFDTKDPNHGFLVGSKGTFLETFDAGETWGVRTFSQLDAEEEITYRFEKVSFLDGEAWIIGKPSILLHSKDEGRNWERIPLSPKLPGEPCDIVATGAETAEMTTSAGAIYYTSNAARNFKAQVKETIDATLNRISSSGVSGASYFTGSIIGTIRDSTGAYLAVSSRGNFYLTWQPGDDFWIPHNRGTSRRIQQMGFVQDDLSKGLWMTLNGGVLQISKTGQDVSN-SDVEFKAANIKTGGYGITDVAWKDENEVWAVGGGGTMFVSVDGGKNFVFNNAADDIPGNLYNVKFFKNGKGFVLGSDGILLKY 412
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BLAST of mRNA_H-akashiwo_Contig119.23.1 vs. uniprot
Match: A0A836CNS8_9STRA (Photosynthesis system II assembly factor YCF48-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNS8_9STRA)

HSP 1 Score: 509 bits (1312), Expect = 6.850e-178
Identity = 245/365 (67.12%), Postives = 287/365 (78.63%), Query Frame = 1 
Query:   37 RSEFITKSAAVGGTVAASGL---WTPSVF-AATEKRKAWEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGPNKGFVLGSDGVLLRYAAG 1119
            R  F + SA VGG  A +GL     PS   AA  K KAWE++ LP   TL+DI FDT +  HGF+VGAKGTFLET +GGK+W  RTF NLD +EEINYRFEKVSF+DGEA+IIGKPPILLHT+D G+SWER+PLSPKLPGEPS I+A G+ +AEMTTSTGA+YYT N   NWKAQ+KETIDATLNR+SSSGVSGAS+F+G+I    RD +G YLAVSSRGNFYLTW PGQDFWIPHNRGT RRIQNMGF++ DI  GVWM+LNGG++Q+++ G  ++   D  F+   IK+GGYGI+D  WKD KE WAVGGGG ++ S DGG  +K+D  ADKIPGNLYT KFF P  GFVLGSDGVLLRY AG
Sbjct:   53 RDFFKSSSALVGGAAAVAGLAGVTAPSAAEAAPVKVKAWEQIALPVATTLYDIAFDTADTQHGFVVGAKGTFLETRDGGKTWDPRTFGNLDAEEEINYRFEKVSFVDGEAFIIGKPPILLHTKDKGESWERVPLSPKLPGEPSNIVALGSGKAEMTTSTGAVYYTNNAGLNWKAQVKETIDATLNRISSSGVSGASYFTGSIIGTLRDKSGAYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVEGDINKGVWMTLNGGVMQISKSGDSLSVATDPTFEPVDIKTGGYGIIDAAWKDAKEAWAVGGGGNLWVSMDGGKTYKYDKVADKIPGNLYTIKFFSPESGFVLGSDGVLLRYLAG 417
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BLAST of mRNA_H-akashiwo_Contig119.23.1 vs. uniprot
Match: A0A6H5KCC9_9PHAE (PSII_BNR domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCC9_9PHAE)

HSP 1 Score: 463 bits (1192), Expect = 1.280e-159
Identity = 229/373 (61.39%), Postives = 281/373 (75.34%), Query Frame = 1 
Query:   10 LNMAEGDISRSE--FITKSA---AVGGT-VAASGLWTPSVFAATEKRKAWEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGPNKGFVLGSDGVLLRY 1110
            + M+  D+S S   F+  SA   AVG   V AS    P+  AAT    AWE+++LP  + L+DI FD ++PDHG +VGA+GTFLETF+GG  W VRTF NLDE+EEINYRF+KVS  + E +IIGKPPILLH++D GK+WER+PLSPKLPGEPS I+A G  +AEMTTS+GAIYYT N   NW AQ+KET+DATLNR+SSSGVSGAS+F+G+I    R  +G+YLAVSSRGNFYLTW PGQDFWIPHNRGT RRIQNMGF++     G+WM+LNGG +Q+++   E  G ND  F +  IKSGGYGI+D  WK++ E WAVGGGG+++YS DGG  FKF S A  I  NLY  KFFG +KGF +GSDGVLL+Y
Sbjct:   50 MRMSLDDVSESRGGFLKDSALGLAVGAVAVGASTGAPPAAEAATVS--AWEQIQLPVASVLYDIAFDPEHPDHGLVVGAQGTFLETFDGGYKWSVRTFGNLDEEEEINYRFQKVSMYNDEIFIIGKPPILLHSKDAGKTWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWSPGQDFWIPHNRGTSRRIQNMGFVRGRAAEGLWMTLNGGAMQMSKTLPE--GTNDPVFSETAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGETFKFSSGATNIGANLYDVKFFGGDKGFAIGSDGVLLKY 418
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BLAST of mRNA_H-akashiwo_Contig119.23.1 vs. uniprot
Match: A0A7R9U3Z4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3Z4_9STRA)

HSP 1 Score: 462 bits (1188), Expect = 2.590e-159
Identity = 222/329 (67.48%), Postives = 257/329 (78.12%), Query Frame = 1 
Query:  139 WEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGPNKGFVLGSDGVLLRYAAGDA 1125
            W +V++ +  TL+DI FD  +P HG LVGAKG+F E+F+GGKSW  R+FS LD DEEI YRFE+VS   GEA+IIGKP ILLHT+D GKSWER+PLSPKLPGEPS II  G+  AEMTTSTGAIYYT N   NWKAQ+KETIDATLNR+SSSGV GAS+FSG+I    RD  G YLAVSSRGNFYLTW PGQDFWIPHNRGT RRIQNMGFI+    NGVWMSLNGG +QLT    ++   +   FK   + SGGYGI+D  WK+++EVWAVGG G+++ SRDGG  F FD SADKIPGNLY+  FFG ++GFVLGSDGVLLRY  G A
Sbjct:   76 WRRVDVGTTETLYDISFDPSDPKHGMLVGAKGSFFESFDGGKSWQPRSFSALDPDEEITYRFEQVSLNGGEAYIIGKPAILLHTKDSGKSWERVPLSPKLPGEPSTIIGLGSGNAEMTTSTGAIYYTTNGGLNWKAQVKETIDATLNRISSSGVKGASYFSGSIALTHRDDQGKYLAVSSRGNFYLTWEPGQDFWIPHNRGTSRRIQNMGFIKGIQDNGVWMSLNGGEVQLTATAPDMASTDLIDFKKVNLNSGGYGIIDLAWKNDREVWAVGGSGSIFVSRDGGGSFSFDKSADKIPGNLYSVSFFG-DQGFVLGSDGVLLRYVGGSA 403
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BLAST of mRNA_H-akashiwo_Contig119.23.1 vs. uniprot
Match: A0A7S2S971_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S971_9STRA)

HSP 1 Score: 463 bits (1191), Expect = 6.040e-159
Identity = 216/328 (65.85%), Postives = 270/328 (82.32%), Query Frame = 1 
Query:  127 KRKAWEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGPNKGFVLGSDGVLLRY 1110
            K  +W +V+     TLFDI FDT +P HG++VGA+GTFLET +GGKSW  R+F+NLD ++EINYRF+ VSF + EAWIIGKP ILLH++D GK+WER+PLSPKLPGEP+GI+A G  +AEMTTSTGAIYYT N  RNWKAQ+KETIDATLNRVSSSGVSGAS+F+G+I+  +RD +G+YLAVSSRGNFYLT+ PG +FWIPHNRGT RRIQ+MGF  + ++ G+WMSLNGGLL+++    ++N   + +F  + IK+GGYGI+D  W+++ EVWAVGGGGTM+ S+DGG  FKFD+SAD IPGNLY+ KFF  + GFVLGSDGVLLRY
Sbjct:  129 KSGSWTQVDAGVDTTLFDIAFDTADPSHGYVVGARGTFLETVDGGKSWFPRSFTNLDAEDEINYRFQTVSFENNEAWIIGKPAILLHSKDAGKNWERVPLSPKLPGEPNGIVALGPGKAEMTTSTGAIYYTENAGRNWKAQVKETIDATLNRVSSSGVSGASYFTGSISSIERDSSGSYLAVSSRGNFYLTYRPGDEFWIPHNRGTSRRIQSMGFANEKLEEGLWMSLNGGLLEVSNKNTDLNS-QEPEFDPSSIKTGGYGIIDVAWRNKNEVWAVGGGGTMHVSKDGGKTFKFDNSADDIPGNLYSVKFF-KDTGFVLGSDGVLLRY 454
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BLAST of mRNA_H-akashiwo_Contig119.23.1 vs. uniprot
Match: A0A7S2CD40_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CD40_9STRA)

HSP 1 Score: 461 bits (1185), Expect = 8.800e-159
Identity = 227/350 (64.86%), Postives = 262/350 (74.86%), Query Frame = 1 
Query:   73 GTVAASGLWTPSVFAA--TEKRKAWEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEK-EVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGPNKGFVLGSDGVLLRYA 1113
            G +  SG   P++ +A   +K  +W +VE     T+FDI FDT +  HGF VG+KGTFLET NGG +W  R+F NLD ++EINYRFE V F DGE+WI+GKP ILLHT D GKSWER+PLSPKLPGEP+GI+A G   AEMTTSTGAIY T N  RNWKA +KETIDATLNRVSSSGVSGAS+F+G++N   RD  G YLAVSSRGNFYLTW PG DFWIPHNRGTPRRIQ MGFI    +NG+WMSLNGGLLQ T  G ++N  +  +F    IK+GGYGI+D  W   + EVWAVGGGGTMY SRDGG  FKFD++AD IPGNLY   F     GFVLGSDGVLLR A
Sbjct:   58 GVLGVSGWVGPTIESAQAAQKSTSWSQVETGIEQTIFDIAFDTADKSHGFAVGSKGTFLETKNGGVTWAPRSFLNLDPEDEINYRFEGVEFKDGESWILGKPAILLHTTDAGKSWERVPLSPKLPGEPNGIVALGPNSAEMTTSTGAIYSTTNSGRNWKALVKETIDATLNRVSSSGVSGASYFTGSVNSIVRDETGAYLAVSSRGNFYLTWTPGDDFWIPHNRGTPRRIQAMGFIDGKRENGLWMSLNGGLLQSTAAGVDLN-ADQPEFNSIPIKTGGYGIIDLAWNSARNEVWAVGGGGTMYVSRDGGKSFKFDNAADNIPGNLYRVLFDKAGGGFVLGSDGVLLREA 406
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BLAST of mRNA_H-akashiwo_Contig119.23.1 vs. uniprot
Match: A0A4D9D332_9STRA (PSII_BNR domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D332_9STRA)

HSP 1 Score: 452 bits (1163), Expect = 1.990e-155
Identity = 224/368 (60.87%), Postives = 276/368 (75.00%), Query Frame = 1 
Query:   16 MAEGDISRSEFI-TKSAAVGGTVAASGLWTPSVFAATEKRKAWEKVE-LPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRD-VNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGPNKGFVLGSDGVLLRY 1110
            + +  +SR + + T S A     AA  L   +  AA     AWE+V  +P GATL+D+DFD+K+P+HG++VG+KGTFLET +GG+SW  R+F +LD DEE+ YRFE+VSF +GE                    ERIPLSPKLPGEPS + ATG   AEMTTSTGAIY T N  RNWKAQ+KETIDATLNR+SSSGV GAS+F+G+I    RD ++G YLAVSSRGNF+LTW+PGQDFW+PHNRGT RRIQNMGF++ D   GVWMSLNGGLLQ+ EP Q+++   + KF D+KI+SGGYGILD +WKDE+EVWAVGGGG+M+ S+DGG  F F+ SAD+IPGNLY  KFFG +KGFVLGS+GVLLRY
Sbjct:   39 LPDSSVSRRDLVKTTSVAAAALSAAGALGGSTQPAAAASNFAWEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFNNGEXXXXXXXXXXXXXXXXXXXXERIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSEEEFKFADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKFFG-DKGFVLGSEGVLLRY 405
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BLAST of mRNA_H-akashiwo_Contig119.23.1 vs. uniprot
Match: A0A7S0FBL4_9STRA (Hypothetical protein n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0FBL4_9STRA)

HSP 1 Score: 446 bits (1146), Expect = 7.070e-153
Identity = 221/363 (60.88%), Postives = 270/363 (74.38%), Query Frame = 1 
Query:   37 RSEFITKS---AAVGGTVAASGLWTPSVFAATEKRKAWEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGP--NKGFVLGSDGVLLRY 1110
            R  F++K+   AA G   AA+G  +  + A  E  + WE V+LP   TL+DIDFDTK  DHG+LVG++GTF ET +GGK+W  R+F NLD +EE+ YRF   SF  GE W++G+P ++LH++D+G SWERIPLSPKLPGEP GI   G  +AEM TS+GAIY T N  RNWKAQ+KETIDATLNR+SSSGVSGAS+F+G+I +  RD  G+YLAVSSRGNF+LTW PGQDFWIPHNRGTPRRIQNMGFI+ DI  G+WM+LNGG L +T+   ++   N   FK+A IK+GGYGI D  W+ EKEVWAVGG  TMY S DGG  F FD SA+ IPGNLY  KFF    N G+ LGS+G+LLRY
Sbjct:   44 RRAFVSKAGGTAAAGIASAAAGSVSTPLPANAESSRLWEAVQLPFEETLYDIDFDTK--DHGYLVGSRGTFAETNDGGKTWEPRSFDNLDAEEEVTYRFTIASFEGGEGWVLGRPSLMLHSKDNGASWERIPLSPKLPGEPVGISGLGTAKAEMITSSGAIYTTDNAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIVNQVRDDLGSYLAVSSRGNFFLTWKPGQDFWIPHNRGTPRRIQNMGFIEGDIDKGLWMTLNGGKLLITDGAVDLASEN-FDFKEANIKTGGYGITDVAWRSEKEVWAVGGSNTMYVSFDGGKNFSFDKSANAIPGNLYNVKFFKEFNNMGWALGSNGLLLRY 403
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BLAST of mRNA_H-akashiwo_Contig119.23.1 vs. uniprot
Match: A0A7S1FY02_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY02_9STRA)

HSP 1 Score: 445 bits (1145), Expect = 7.100e-153
Identity = 224/373 (60.05%), Postives = 278/373 (74.53%), Query Frame = 1 
Query:    1 SSQLNMAEGDISRSEFITKSAAVGGTVA-ASGLWTPSVFAATEKRKAWEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGP--NKGFVLGSDGVLLRY 1110
            SS + MA    +R  F+T+SA+    VA AS    P+  A+T   K W  +E+P   TL+DIDFD+  P HG+LVGA+GTF ET +GG +W  R+FSNLD +EE+ YRF++VSF+DGE W++GKP +LLHT+D GKSWERIPLSPKLPG+P+ I+A G  +AEMTT++GAIY T N  RNWKAQ+KETIDATLNRVSSSGVSGAS+F+G I    RD +G+YLAVSSRGNF+LTW  G DFWIPHNRGTPRRIQ MGF+ D IK G+WM+LNGG L ++ P   +N  ++  F +A IK+GGYGI D  W+ + EVWAVGG  TMY S D G  F FDSSA+KIPGNLY  KFF    N G+ LGS+G+LL+Y
Sbjct:   32 SSLVQMAN---NRRTFVTESASTAAVVATASSFPLPASAAST---KMWTPIEVPFADTLYDIDFDS--PTHGYLVGARGTFAETNDGGNTWEPRSFSNLDAEEEVTYRFQQVSFVDGEGWVLGKPTLLLHTKDAGKSWERIPLSPKLPGDPAKILALGPNRAEMTTTSGAIYITENAGRNWKAQVKETIDATLNRVSSSGVSGASYFTGNILQPTRDSSGSYLAVSSRGNFFLTWEKGGDFWIPHNRGTPRRIQAMGFVGDSIKKGLWMTLNGGKLLVSPPLDAVN-EDEYGFTEANIKTGGYGITDVAWRTDDEVWAVGGSNTMYRSVDNGKNFAFDSSANKIPGNLYNLKFFKEFGNMGWALGSNGILLKY 395
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig119.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XNC3_HETAK3.460e-283100.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XVG6_9STRA7.820e-17967.86Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CNS8_9STRA6.850e-17867.12Photosynthesis system II assembly factor YCF48-dom... [more]
A0A6H5KCC9_9PHAE1.280e-15961.39PSII_BNR domain-containing protein n=2 Tax=Ectocar... [more]
A0A7R9U3Z4_9STRA2.590e-15967.48Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2S971_9STRA6.040e-15965.85Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CD40_9STRA8.800e-15964.86Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9D332_9STRA1.990e-15560.87PSII_BNR domain-containing protein n=2 Tax=Monodop... [more]
A0A7S0FBL4_9STRA7.070e-15360.88Hypothetical protein n=1 Tax=Rhizosolenia setigera... [more]
A0A7S1FY02_9STRA7.100e-15360.05Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig119contigH-akashiwo_Contig119:1470863..1471990 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FML1
Preferred nameSORCS2
PFAMsLdl_recept_a,Ldl_recept_b,PKD,PSII_BNR,Sortilin-Vps10,Sortilin_C,fn3
Model size1128
Max annot lvl2759|Eukaryota
KEGG koko:K02966,ko:K12388
KEGG TC9.A.63.1.3
KEGG Pathwayko03010,ko04142,ko04722,ko04979,map03010,map04142,map04722,map04979
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0001540,GO:0001653,GO:0001932,GO:0001933,GO:0003008,GO:0003674,GO:0004888,GO:0004930,GO:0005030,GO:0005041,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005641,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005771,GO:0005783,GO:0005794,GO:0005795,GO:0005798,GO:0005802,GO:0005829,GO:0005886,GO:0005887,GO:0005905,GO:0006469,GO:0006605,GO:0006622,GO:0006623,GO:0006807,GO:0006810,GO:0006886,GO:0006892,GO:0006895,GO:0006897,GO:0006898,GO:0006915,GO:0006928,GO:0006996,GO:0007034,GO:0007041,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007186,GO:0007218,GO:0007275,GO:0007399,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0008104,GO:0008150,GO:0008152,GO:0008188,GO:0008219,GO:0008333,GO:0008528,GO:0008625,GO:0008643,GO:0008645,GO:0009507,GO:0009526,GO:0009532,GO:0009533,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009657,GO:0009719,GO:0009725,GO:0009735,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009941,GO:0009966,GO:0009968,GO:0009986,GO:0009987,GO:0010008,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010465,GO:0010466,GO:0010467,GO:0010468,GO:0010563,GO:0010604,GO:0010605,GO:0010646,GO:0010648,GO:0010721,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0012506,GO:0014069,GO:0014902,GO:0014910,GO:0015031,GO:0015749,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016477,GO:0016482,GO:0016492,GO:0019220,GO:0019222,GO:0019538,GO:0019838,GO:0019899,GO:0022008,GO:0023051,GO:0023052,GO:0023057,GO:0030133,GO:0030135,GO:0030136,GO:0030140,GO:0030154,GO:0030162,GO:0030169,GO:0030228,GO:0030306,GO:0030334,GO:0030379,GO:0030425,GO:0030659,GO:0031090,GO:0031224,GO:0031226,GO:0031267,GO:0031323,GO:0031324,GO:0031333,GO:0031399,GO:0031400,GO:0031410,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031976,GO:0031977,GO:0031982,GO:0031984,GO:0031985,GO:0032091,GO:0032268,GO:0032269,GO:0032279,GO:0032386,GO:0032388,GO:0032459,GO:0032460,GO:0032501,GO:0032502,GO:0032507,GO:0032509,GO:0032868,GO:0032879,GO:0032880,GO:0033036,GO:0033157,GO:0033218,GO:0033365,GO:0033673,GO:0034067,GO:0034219,GO:0034248,GO:0034249,GO:0034357,GO:0034613,GO:0036477,GO:0038023,GO:0038024,GO:0038179,GO:0038180,GO:0040011,GO:0040012,GO:0042176,GO:0042221,GO:0042277,GO:0042325,GO:0042326,GO:0042651,GO:0042692,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043025,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043086,GO:0043121,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043393,GO:0043405,GO:0043407,GO:0043408,GO:0043409,GO:0043434,GO:0043549,GO:0044087,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044434,GO:0044435,GO:0044436,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045053,GO:0045184,GO:0045185,GO:0045202,GO:0045595,GO:0045596,GO:0045598,GO:0045599,GO:0045732,GO:0045859,GO:0045861,GO:0045936,GO:0046323,GO:0046686,GO:0046907,GO:0048011,GO:0048167,GO:0048193,GO:0048227,GO:0048406,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050767,GO:0050768,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050804,GO:0050877,GO:0050890,GO:0050896,GO:0051004,GO:0051005,GO:0051020,GO:0051049,GO:0051050,GO:0051093,GO:0051098,GO:0051100,GO:0051128,GO:0051129,GO:0051146,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051235,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051270,GO:0051336,GO:0051338,GO:0051346,GO:0051347,GO:0051348,GO:0051604,GO:0051641,GO:0051649,GO:0051651,GO:0051674,GO:0051716,GO:0051960,GO:0051961,GO:0052547,GO:0052548,GO:0055035,GO:0055037,GO:0055085,GO:0060089,GO:0060191,GO:0060192,GO:0060255,GO:0060284,GO:0060341,GO:0060548,GO:0060627,GO:0060628,GO:0061061,GO:0061462,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070727,GO:0070848,GO:0070861,GO:0070863,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071813,GO:0071814,GO:0071840,GO:0071900,GO:0071901,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0080090,GO:0090083,GO:0090084,GO:0090087,GO:0090316,GO:0097190,GO:0097191,GO:0097447,GO:0097458,GO:0097708,GO:0098588,GO:0098657,GO:0098791,GO:0098794,GO:0098805,GO:0098984,GO:0099177,GO:0099572,GO:0120025,GO:0120038,GO:1900452,GO:1901214,GO:1901215,GO:1901564,GO:1901652,GO:1901698,GO:1901700,GO:1902003,GO:1902430,GO:1902531,GO:1902532,GO:1902769,GO:1902771,GO:1902947,GO:1902948,GO:1902953,GO:1902954,GO:1902955,GO:1902959,GO:1902960,GO:1902962,GO:1902963,GO:1902965,GO:1902966,GO:1902991,GO:1902992,GO:1902996,GO:1902997,GO:1903649,GO:1903651,GO:1903827,GO:1903829,GO:1904035,GO:1904037,GO:1904659,GO:1904683,GO:1904684,GO:1904951,GO:1905048,GO:1905049,GO:1905245,GO:1905246,GO:1905666,GO:1905668,GO:1990089,GO:1990090,GO:2000026,GO:2000145,GO:2001135,GO:2001137
Exons1
Evalue1.03e-159
EggNOG OGsKOG3511@1|root,KOG3511@2759|Eukaryota
Ec32 ortholog descriptionphotosystem II stability/assembly factor HCF136
Ec32 orthologEc-23_000710.1
Descriptionprotein transport
Cds size1113
COG categoryU
BRITEbr01610,ko00000,ko00001,ko00002,ko02000,ko03011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387111.574083-CDS-H-akashiwo_Contig119:1470862..14719751681387111.574083-CDS-H-akashiwo_Contig119:1470862..1471975Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig119 1470863..1471975 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387111.5881383-UTR-H-akashiwo_Contig119:1471975..14719901681387111.5881383-UTR-H-akashiwo_Contig119:1471975..1471990Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig119 1471976..1471990 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig119.23.1prot_H-akashiwo_Contig119.23.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig119 1470863..1471975 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig119.23.1

>prot_H-akashiwo_Contig119.23.1 ID=prot_H-akashiwo_Contig119.23.1|Name=mRNA_H-akashiwo_Contig119.23.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=371bp
MAEGDISRSEFITKSAAVGGTVAASGLWTPSVFAATEKRKAWEKVELPSG
ATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEIN
YRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIA
TGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASF
FSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNM
GFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGIL
DCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGP
NKGFVLGSDGVLLRYAAGDA*
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mRNA from alignment at H-akashiwo_Contig119:1470863..1471990-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig119.23.1 ID=mRNA_H-akashiwo_Contig119.23.1|Name=mRNA_H-akashiwo_Contig119.23.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1128bp|location=Sequence derived from alignment at H-akashiwo_Contig119:1470863..1471990- (Heterosigma akashiwo CCMP452)
TCGTCCCAGCTCAACATGGCGGAAGGTGATATTAGCCGCAGCGAGTTCAT
TACGAAGAGTGCAGCAGTGGGGGGTACCGTTGCTGCTAGTGGGCTCTGGA
CTCCTTCAGTTTTCGCCGCTACTGAGAAAAGGAAAGCATGGGAAAAGGTT
GAGCTTCCTTCTGGCGCCACCCTGTTCGACATTGACTTTGATACCAAAAA
CCCCGACCACGGTTTCCTGGTCGGTGCAAAAGGCACTTTCCTTGAGACCT
TTAATGGTGGGAAGTCCTGGGGTGTGAGAACATTCTCCAACCTCGATGAA
GATGAAGAGATCAACTACCGGTTCGAGAAGGTTTCATTCCTCGATGGCGA
GGCTTGGATCATCGGCAAGCCCCCAATTCTCCTTCACACCCGCGATGACG
GTAAGTCATGGGAGCGTATTCCTCTTTCTCCTAAGCTTCCTGGTGAGCCC
TCAGGCATCATTGCCACTGGCAATGAGCAGGCGGAGATGACCACCTCTAC
TGGTGCTATCTACTACACCGGCAACCAGGCCCGGAACTGGAAGGCCCAGC
TCAAGGAGACGATCGACGCCACCCTCAACAGAGTCAGTTCCTCCGGTGTG
AGCGGTGCCTCTTTCTTCTCAGGTACCATCAATGACTGCAAGCGCGACGT
GAATGGAAATTACCTGGCGGTGAGCTCCCGCGGGAACTTTTACCTCACCT
GGGTGCCCGGCCAGGACTTCTGGATCCCCCACAACCGCGGCACCCCCCGC
CGCATCCAGAACATGGGGTTCATCCAGGACGACATCAAGAACGGGGTCTG
GATGTCCCTGAACGGCGGCCTCCTCCAGCTGACCGAGCCGGGGCAGGAGA
TCAACGGCATCAACGACGCCAAGTTCAAGGACGCCAAGATCAAGTCTGGC
GGTTACGGCATTCTTGATTGCACCTGGAAGGACGAAAAGGAGGTGTGGGC
CGTGGGGGGTGGCGGAACCATGTACTACTCCCGCGACGGCGGCAACGAGT
TCAAGTTTGACTCCAGCGCCGACAAGATCCCAGGCAACCTGTACACCTGC
AAGTTCTTTGGACCAAACAAGGGCTTTGTCCTGGGTTCTGACGGTGTGCT
ACTCCGCTATGCCGCCGGCGACGCCTAA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig119:1470863..1471990-

>mRNA_H-akashiwo_Contig119.23.1 ID=mRNA_H-akashiwo_Contig119.23.1|Name=mRNA_H-akashiwo_Contig119.23.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1113bp|location=Sequence derived from alignment at H-akashiwo_Contig119:1470863..1471990- (Heterosigma akashiwo CCMP452)
ATGGCGGAAGGTGATATTAGCCGCAGCGAGTTCATTACGAAGAGTGCAGC
AGTGGGGGGTACCGTTGCTGCTAGTGGGCTCTGGACTCCTTCAGTTTTCG
CCGCTACTGAGAAAAGGAAAGCATGGGAAAAGGTTGAGCTTCCTTCTGGC
GCCACCCTGTTCGACATTGACTTTGATACCAAAAACCCCGACCACGGTTT
CCTGGTCGGTGCAAAAGGCACTTTCCTTGAGACCTTTAATGGTGGGAAGT
CCTGGGGTGTGAGAACATTCTCCAACCTCGATGAAGATGAAGAGATCAAC
TACCGGTTCGAGAAGGTTTCATTCCTCGATGGCGAGGCTTGGATCATCGG
CAAGCCCCCAATTCTCCTTCACACCCGCGATGACGGTAAGTCATGGGAGC
GTATTCCTCTTTCTCCTAAGCTTCCTGGTGAGCCCTCAGGCATCATTGCC
ACTGGCAATGAGCAGGCGGAGATGACCACCTCTACTGGTGCTATCTACTA
CACCGGCAACCAGGCCCGGAACTGGAAGGCCCAGCTCAAGGAGACGATCG
ACGCCACCCTCAACAGAGTCAGTTCCTCCGGTGTGAGCGGTGCCTCTTTC
TTCTCAGGTACCATCAATGACTGCAAGCGCGACGTGAATGGAAATTACCT
GGCGGTGAGCTCCCGCGGGAACTTTTACCTCACCTGGGTGCCCGGCCAGG
ACTTCTGGATCCCCCACAACCGCGGCACCCCCCGCCGCATCCAGAACATG
GGGTTCATCCAGGACGACATCAAGAACGGGGTCTGGATGTCCCTGAACGG
CGGCCTCCTCCAGCTGACCGAGCCGGGGCAGGAGATCAACGGCATCAACG
ACGCCAAGTTCAAGGACGCCAAGATCAAGTCTGGCGGTTACGGCATTCTT
GATTGCACCTGGAAGGACGAAAAGGAGGTGTGGGCCGTGGGGGGTGGCGG
AACCATGTACTACTCCCGCGACGGCGGCAACGAGTTCAAGTTTGACTCCA
GCGCCGACAAGATCCCAGGCAACCTGTACACCTGCAAGTTCTTTGGACCA
AACAAGGGCTTTGTCCTGGGTTCTGACGGTGTGCTACTCCGCTATGCCGC
CGGCGACGCCTAA
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