mRNA_H-akashiwo_Contig119.19.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig119.19.1 vs. uniprot
Match: A0A7S0SQE8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQE8_9STRA) HSP 1 Score: 187 bits (475), Expect = 6.730e-54 Identity = 86/117 (73.50%), Postives = 98/117 (83.76%), Query Frame = 3
Query: 507 HDLSSPSPSKKRRVVRKWTKEEDDMMRALVKEYGTKHWGLIGSKLNGRTGKQCRERWHNQLDPQINKKPWTPQEEDILIAAHTEFGNKWAEIAKLLPGRTDNAIKNHWNSANRRLTR 857
HDLS+ +R VRKWT+EED++M ALV E+GT+HWGLIG+KLNGRTGKQCRERWHNQLDP INK PWT EE +L+AAH + GN+WAEIAK LPGRTDNAIKNHWNSA RRL R
Sbjct: 8 HDLSNGQ----KRTVRKWTQEEDNLMMALVSEHGTRHWGLIGAKLNGRTGKQCRERWHNQLDPAINKTPWTEHEESLLLAAHNDLGNRWAEIAKRLPGRTDNAIKNHWNSAKRRLLR 120
BLAST of mRNA_H-akashiwo_Contig119.19.1 vs. uniprot
Match: A0A7S2CJK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJK5_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.440e-51 Identity = 82/108 (75.93%), Postives = 92/108 (85.19%), Query Frame = 3
Query: 534 KKRRVVRKWTKEEDDMMRALVKEYGTKHWGLIGSKLNGRTGKQCRERWHNQLDPQINKKPWTPQEEDILIAAHTEFGNKWAEIAKLLPGRTDNAIKNHWNSANRRLTR 857
K RRVVRKWT EED +M LV+E+GTKHWG IGS L GRTGKQCRERWHNQLDP I K PWT EE+IL+ AH+ +GN+WAEIAKLLPGRTDNA+KNHWNSA RRL+R
Sbjct: 43 KPRRVVRKWTPEEDSLMMTLVQEHGTKHWGRIGSSLQGRTGKQCRERWHNQLDPAIRKDPWTGGEEEILLKAHSLYGNRWAEIAKLLPGRTDNAVKNHWNSAKRRLSR 150
BLAST of mRNA_H-akashiwo_Contig119.19.1 vs. uniprot
Match: A0A835YSF8_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSF8_9STRA) HSP 1 Score: 176 bits (446), Expect = 3.570e-51 Identity = 83/116 (71.55%), Postives = 97/116 (83.62%), Query Frame = 3
Query: 525 SPSKKRRVVRKWTKEEDDMMRALVKEYGTKHWGLIGSKLNGRTGKQCRERWHNQLDPQINKKPWTPQEEDILIAAHTEFGNKWAEIAKLLPGRTDNAIKNHWNSANRRLTRRWQLN 872
+PS +RVVRKW+ EED +M LVKE+GT+ WGLIGS L+GRTGKQCRERWHNQLDP I K WT +EE++L+ AH+ GN+WAEIAKLLPGRTDNAIKNHWNSA RRL+R QLN
Sbjct: 23 TPSSFKRVVRKWSPEEDQLMALLVKEHGTRQWGLIGSLLSGRTGKQCRERWHNQLDPHIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLSR--QLN 136
BLAST of mRNA_H-akashiwo_Contig119.19.1 vs. uniprot
Match: A0A835YW24_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW24_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.040e-49 Identity = 75/105 (71.43%), Postives = 89/105 (84.76%), Query Frame = 3
Query: 540 RRVVRKWTKEEDDMMRALVKEYGTKHWGLIGSKLNGRTGKQCRERWHNQLDPQINKKPWTPQEEDILIAAHTEFGNKWAEIAKLLPGRTDNAIKNHWNSANRRLT 854
+R VRKW+ EED +M LV+E+GT+ WGLIGS L+GRTGKQCRERWHNQLDP I K WT +EE++L+ AH+ GN+WAEIAKLLPGRTDNAIKNHWNSA RRL+
Sbjct: 3 KRSVRKWSPEEDQLMMLLVREHGTRQWGLIGSLLSGRTGKQCRERWHNQLDPMIKKDAWTREEEEVLMQAHSVHGNRWAEIAKLLPGRTDNAIKNHWNSAKRRLS 107
BLAST of mRNA_H-akashiwo_Contig119.19.1 vs. uniprot
Match: A0A024GD84_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GD84_9STRA) HSP 1 Score: 168 bits (426), Expect = 3.310e-47 Identity = 82/127 (64.57%), Postives = 95/127 (74.80%), Query Frame = 3
Query: 477 SPATSAVKEQHDLSSPSPSKKRRVVRKWTKEEDDMMRALVKEYGTKHWGLIGSKLNGRTGKQCRERWHNQLDPQINKKPWTPQEEDILIAAHTEFGNKWAEIAKLLPGRTDNAIKNHWNSANRRLTR 857
SPA +V H + + K R+ V KWT EED+MM LV+ YGT+HW +IG+KL GR GKQCRERWHNQLDP I K PWT +EE IL AH ++GNKWAEIAK LPGRTDNAIKNHWNS+ RRL R
Sbjct: 8 SPAKQSVIYNHTVCTVR--KDRKPVSKWTDEEDNMMIKLVERYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPSIRKDPWTDEEERILKEAHEKYGNKWAEIAKKLPGRTDNAIKNHWNSSKRRLKR 132
BLAST of mRNA_H-akashiwo_Contig119.19.1 vs. uniprot
Match: D0MS64_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MS64_PHYIT) HSP 1 Score: 169 bits (428), Expect = 5.030e-47 Identity = 77/112 (68.75%), Postives = 92/112 (82.14%), Query Frame = 3
Query: 522 PSPSKKRRVVRKWTKEEDDMMRALVKEYGTKHWGLIGSKLNGRTGKQCRERWHNQLDPQINKKPWTPQEEDILIAAHTEFGNKWAEIAKLLPGRTDNAIKNHWNSANRRLTR 857
P K+R+ V KWT++ED +M LV++YGT+HW +IG+KL GR GKQCRERWHNQLDP I K+PWTP+EE IL H +FGNKWAEIAK+LPGRTDNAIKNHWNS+ RRL R
Sbjct: 23 PPTRKERKPVCKWTEKEDLLMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPEEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 134
BLAST of mRNA_H-akashiwo_Contig119.19.1 vs. uniprot
Match: K3WAA6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAA6_GLOUD) HSP 1 Score: 171 bits (432), Expect = 5.050e-47 Identity = 82/141 (58.16%), Postives = 108/141 (76.60%), Query Frame = 3
Query: 444 PLAEMMAAPVPSPATSAVKEQHDLSSPSPS---KKRRVVRKWTKEEDDMMRALVKEYGTKHWGLIGSKLNGRTGKQCRERWHNQLDPQINKKPWTPQEEDILIAAHTEFGNKWAEIAKLLPGRTDNAIKNHWNSANRRLTR 857
P +EM + S ++++ +++SPS S K+R+ V KWT++ED +M LV++YGT+HW +IG+KL GR GKQCRERWHNQLDP I K+PW+ +EE IL +H +FGNKWAEIAK+LPGRTDNAIKNHWNS+ RRL R
Sbjct: 7 PRSEMPQLSTSNSKPSKLQQRDNMNSPSSSTSRKERKPVCKWTEKEDLLMMKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWSEEEERILRESHEQFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 147
BLAST of mRNA_H-akashiwo_Contig119.19.1 vs. uniprot
Match: G4YFF8_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YFF8_PHYSP) HSP 1 Score: 171 bits (434), Expect = 5.470e-47 Identity = 82/131 (62.60%), Postives = 103/131 (78.63%), Query Frame = 3
Query: 471 VPSPATSAVKEQHDLSSPSPS--KKRRVVRKWTKEEDDMMRALVKEYGTKHWGLIGSKLNGRTGKQCRERWHNQLDPQINKKPWTPQEEDILIAAHTEFGNKWAEIAKLLPGRTDNAIKNHWNSANRRLTR 857
+PS ++A E L +P+P K+R+ V KWT++ED +M LV++YGT+HW +IG+KL GR GKQCRERWHNQLDP I K+PW+P+EE IL H +FGNKWAEIAK+LPGRTDNAIKNHWNS+ RRL R
Sbjct: 2 MPSQHSAAQLELPQLEAPAPRLRKERKPVCKWTEKEDLLMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWSPEEERILRELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 132
BLAST of mRNA_H-akashiwo_Contig119.19.1 vs. uniprot
Match: W2QEC1_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QEC1_PHYPN) HSP 1 Score: 169 bits (427), Expect = 6.720e-47 Identity = 77/108 (71.30%), Postives = 90/108 (83.33%), Query Frame = 3
Query: 534 KKRRVVRKWTKEEDDMMRALVKEYGTKHWGLIGSKLNGRTGKQCRERWHNQLDPQINKKPWTPQEEDILIAAHTEFGNKWAEIAKLLPGRTDNAIKNHWNSANRRLTR 857
K+R+ V KWT++ED MM LV++YGT+HW +IG+KL GR GKQCRERWHNQLDP I K+PWTP EE IL H +FGNKWAEIAK+LPGRTDNAIKNHWNS+ RRL R
Sbjct: 24 KERKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPDEERILKELHDKFGNKWAEIAKMLPGRTDNAIKNHWNSSKRRLKR 131
BLAST of mRNA_H-akashiwo_Contig119.19.1 vs. uniprot
Match: A0A329SGH1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SGH1_9STRA) HSP 1 Score: 169 bits (427), Expect = 7.860e-47 Identity = 81/120 (67.50%), Postives = 93/120 (77.50%), Query Frame = 3
Query: 510 DLSSP----SPSKKRRVVRKWTKEEDDMMRALVKEYGTKHWGLIGSKLNGRTGKQCRERWHNQLDPQINKKPWTPQEEDILIAAHTEFGNKWAEIAKLLPGRTDNAIKNHWNSANRRLTR 857
DL P S K+R+ V KWT++ED MM LV++YGT+HW +IG+KL GR GKQCRERWHNQLDP I K+PWTP EE IL H FGNKWAEIAK+LPGRTDNAIKNHWNS+ RRL R
Sbjct: 16 DLEQPHQEFSTRKERKPVCKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQLDPAIRKEPWTPDEERILKELHDTFGNKWAEIAKVLPGRTDNAIKNHWNSSKRRLKR 135 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig119.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig119.19.1 >prot_H-akashiwo_Contig119.19.1 ID=prot_H-akashiwo_Contig119.19.1|Name=mRNA_H-akashiwo_Contig119.19.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=263bp MEKRKERAMSPAEEQSAATQHPVTPSLYPYPPHGLYCVQPPTPTSRLLVAback to top mRNA from alignment at H-akashiwo_Contig119:1383605..1385093+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig119.19.1 ID=mRNA_H-akashiwo_Contig119.19.1|Name=mRNA_H-akashiwo_Contig119.19.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1489bp|location=Sequence derived from alignment at H-akashiwo_Contig119:1383605..1385093+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig119:1383605..1385093+ >mRNA_H-akashiwo_Contig119.19.1 ID=mRNA_H-akashiwo_Contig119.19.1|Name=mRNA_H-akashiwo_Contig119.19.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=789bp|location=Sequence derived from alignment at H-akashiwo_Contig119:1383605..1385093+ (Heterosigma akashiwo CCMP452)back to top |