mRNA_H-akashiwo_Contig1188.2.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1188.2.1 vs. uniprot
Match: D7FS66_ECTSI (Putative cyclin A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS66_ECTSI) HSP 1 Score: 244 bits (623), Expect = 5.070e-76 Identity = 132/284 (46.48%), Postives = 186/284 (65.49%), Query Frame = 1
Query: 31 LPPGVDDID---KEDKQESLCNPDYIESFFQYLRIKEEEWQPTEYIGTIQTDMKPNMRSILVDWLVEVVDEYKLSQKTMYLGINLIDRSLSLFPVPRTKLQLLGCSAMLLAAKFEEIYAPSIDDFVYISDNTYTKEQILNYEQKITQYLNFQLNGVTPYHYLRRFMQASQSGPKEESYVHYILELMMQDYQFVKYPASMQAAACIHLARQTLYKDYSTH--WTSQLEFYTGYTSKKLGDIVRKLHSIVESAHEGTLKAVREKYSKKDKHYVSKILALRPSELRF 867
LPPGV DID E+ + L NPDY + YLR +E+ +P YIG Q DM+P+MRS+LVDW+ EV D++KLS +T++ ++LIDRSLS F VPR KLQLLGC+ ++LA+K+EEIYAP+ ++ +ISDNTYT+ +I+ E + L F+L +TP ++ RF A++S +E S V Y+LEL++QDYQ V S++AAA ++LARQTL+ WT Q E YTGY +++L VR+LH + A L AVR+KY K H V+++ L F
Sbjct: 50 LPPGVKDIDAGVSEEGESHLLNPDYAKEHALYLREQEKRNRPVAYIGAKQKDMRPSMRSVLVDWICEVCDQFKLSSRTLFQAVDLIDRSLSAFEVPRGKLQLLGCACVVLASKYEEIYAPTAEELAHISDNTYTRAEIIAMELVVVNALQFRLTCITPCNFQDRFCLAAKSNARERSLVSYLLELLLQDYQGVSLLPSLKAAAALYLARQTLHPRGCPREAWTRQTEHYTGYAARELEPCVRRLHYLHVRAEGNNLHAVRDKYKKSALHRVAEVTCALEDYLHF 333
BLAST of mRNA_H-akashiwo_Contig1188.2.1 vs. uniprot
Match: A0A6H5L2E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E4_9PHAE) HSP 1 Score: 246 bits (629), Expect = 3.610e-74 Identity = 133/284 (46.83%), Postives = 186/284 (65.49%), Query Frame = 1
Query: 31 LPPGVDDID---KEDKQESLCNPDYIESFFQYLRIKEEEWQPTEYIGTIQTDMKPNMRSILVDWLVEVVDEYKLSQKTMYLGINLIDRSLSLFPVPRTKLQLLGCSAMLLAAKFEEIYAPSIDDFVYISDNTYTKEQILNYEQKITQYLNFQLNGVTPYHYLRRFMQASQSGPKEESYVHYILELMMQDYQFVKYPASMQAAACIHLARQTLYKDYSTH--WTSQLEFYTGYTSKKLGDIVRKLHSIVESAHEGTLKAVREKYSKKDKHYVSKILALRPSELRF 867
LPPGV DID E + L NPDY + YLR +E+ +P YIGT Q DM+P+MRS+LVDW+ EV D++KLS +T++ ++LIDRSLS F VPR KLQLLGC+ ++LA+K+EEIYAP+ ++ +ISDNTYT+ +I+ E + L F+L +TP ++ RF A++S +E S V Y+LEL++QDYQ V S++AAA ++LARQTL+ WT Q E YTGY +++L VR+LH + A L AVR+KY K H V+++ L F
Sbjct: 290 LPPGVKDIDAGVSEQGESHLLNPDYAKQHALYLREQEKRNRPVAYIGTKQRDMRPSMRSVLVDWICEVCDQFKLSSRTLFQAVDLIDRSLSAFEVPRGKLQLLGCACVVLASKYEEIYAPTAEELAHISDNTYTRAEIIAMELVVVNALQFRLTSITPCNFQDRFCLAAKSNARERSLVSYLLELLLQDYQGVSLLPSLKAAAALYLARQTLHPRGCPREAWTRQTEHYTGYAARELEPCVRRLHYLHVRAEGNNLHAVRDKYKKSALHRVAEVTCALEDYLHF 573
BLAST of mRNA_H-akashiwo_Contig1188.2.1 vs. uniprot
Match: A0A6B2LDW7_9EUKA (Cyclin N-terminal domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LDW7_9EUKA) HSP 1 Score: 194 bits (493), Expect = 2.630e-57 Identity = 110/264 (41.67%), Postives = 167/264 (63.26%), Query Frame = 1
Query: 46 DDIDKEDKQESLCNPDYIESFFQYLRIKEEEWQPTEYIGTIQTDMKPNMRSILVDWLVEVVDEYKLSQKTMYLGINLIDRSLSLFPVPRTKLQLLGCSAMLLAAKFEEIYAPSIDDFVYISDNTYTKEQILNYEQKITQYLNFQLNGVTPYHYLRRFMQASQSGPKEESYVHYILELMMQDYQFVKYPASMQAAACIHLARQTLYKDYSTHWTSQLEFYTGYTSKKLGDIVRKLHSIVESAHEGTLKAVREKYSKKDKHYVSKI 837
+DID D + DY+ +++L IKE++ + T QTD+ MRSILVDWLVEV +KL +T++L +N+IDR LSL VPR KLQL+G ++ML+A+K+EEIYAP +DFVYISD +TK+QIL EQ+I LNF L +P H+LRR+ +A+ S + Y++ELM+ D F+K+ AS AA + LAR K S W+ LE Y+ Y++ + I +++ ++ + + +LKA+++KY+ VS++
Sbjct: 10 EDIDASDYDDPQAVSDYVNEIYEHLMIKEKKDKITPNYLEKQTDINEKMRSILVDWLVEVHRMFKLIPETLFLSVNIIDRYLSLKNVPRDKLQLVGITSMLIASKYEEIYAPESNDFVYISDGAFTKDQILAMEQQILNTLNFNLLHPSPLHFLRRYSKAAGSDYTIHTLCKYLIELMLLDVGFLKFNASEIAAGAVFLARAMTQK--SAFWSGTLEHYSTYSAAHVQPIAHEMNEFLKKSQKSSLKALKKKYASSKFGEVSEL 271
BLAST of mRNA_H-akashiwo_Contig1188.2.1 vs. uniprot
Match: A0A6D2IRV4_9BRAS (Cyclin N-terminal domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IRV4_9BRAS) HSP 1 Score: 195 bits (495), Expect = 3.930e-57 Identity = 112/254 (44.09%), Postives = 165/254 (64.96%), Query Frame = 1
Query: 49 DIDKEDKQESLCNPDYIESFFQYLRIKEEEWQPTEYIGTIQTDMKPNMRSILVDWLVEVVDEYKLSQKTMYLGINLIDRSLSLFPVPRTKLQLLGCSAMLLAAKFEEIYAPSIDDFVYISDNTYTKEQILNYEQKITQYLNFQLNGVTPYHYLRRFMQASQSGPKEESYVHYILELMMQDYQFVKYPASMQAAACIHLARQTLYKDYSTHWTSQLEFYTGYTSKKLGDIVRKLHSIVESAHEGTLKAVREKYSK 810
DID DK L +Y+E + + + E E +P Y+ T QT++ MRSILVDWLVEV ++ LS +T+YL INLIDR LSL VPR +LQLLG SA+L+A+K+EEI+ P ++D VY++DN+Y+ +QIL E+ I L + L T Y +L RF +A+ S P+ E+ VHY+ EL + +Y+ +K+P S+ AA+ ++ AR L K + W L+F+TGY + ++ ++L I EG L+AV +KYSK
Sbjct: 64 DIDSVDKDNDLAAVEYVEDMYTFYKEVENESKPVMYMPT-QTEINEKMRSILVDWLVEVHIKFDLSPETLYLTINLIDRFLSLKTVPRRELQLLGVSALLIASKYEEIWPPQVNDLVYVTDNSYSNKQILVMEKTILGSLEWYLTVPTQYVFLVRFTKAAISDPEVENMVHYLAELGLMNYETLKFPPSLLAASAVYAARCFLNKRPA--WNDTLKFHTGYAAFEILQCAKRLALIHSRVGEGKLRAVFKKYSK 314
BLAST of mRNA_H-akashiwo_Contig1188.2.1 vs. uniprot
Match: A0A6D2HJ17_9BRAS (Cyclin N-terminal domain-containing protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2HJ17_9BRAS) HSP 1 Score: 196 bits (499), Expect = 1.410e-56 Identity = 113/263 (42.97%), Postives = 170/263 (64.64%), Query Frame = 1
Query: 49 DIDKEDKQESLCNPDYIESFFQYLRIKEEEWQPTEYIGTIQTDMKPNMRSILVDWLVEVVDEYKLSQKTMYLGINLIDRSLSLFPVPRTKLQLLGCSAMLLAAKFEEIYAPSIDDFVYISDNTYTKEQILNYEQKITQYLNFQLNGVTPYHYLRRFMQASQSGPKEESYVHYILELMMQDYQFVKYPASMQAAACIHLARQTLYKDYSTHWTSQLEFYTGYTSKKLGDIVRKLHSIVESAHEGTLKAVREKYSKKDKHYVSKI 837
DID DK L +Y+E + + + E E +P Y+ T QT++ MRSILVDWLVEV ++ LS +T+YL INLIDR LSL VPR +LQLLG SA+L+A+K+EEI+ P ++D VY++DN+Y+ +QIL E+ I L + L T Y +L RF +A+ S P+ E+ VHY+ EL + +Y+ +K+P S+ AA+ ++ AR L K + W L+F+TGY + ++ ++L I EG L+AV +KYSK ++ V+ +
Sbjct: 145 DIDSVDKDNDLAAVEYVEDMYTFYKEVENESKPVMYMPT-QTEINEKMRSILVDWLVEVHIKFDLSPETLYLTINLIDRFLSLKTVPRRELQLLGVSALLIASKYEEIWPPQVNDLVYVTDNSYSNKQILVMEKTILGSLEWYLTVPTQYVFLVRFTKAAISDPEVENMVHYLAELGLMNYETLKFPPSLLAASAVYAARCFLNKRPA--WNDTLKFHTGYAAFEILQCAKRLALIHSRVGEGKLRAVFKKYSKSERCAVALV 404
BLAST of mRNA_H-akashiwo_Contig1188.2.1 vs. uniprot
Match: UPI001ABEAAC6 (G2/mitotic-specific cyclin-B3 isoform X1 n=4 Tax=Bufo TaxID=8383 RepID=UPI001ABEAAC6) HSP 1 Score: 196 bits (499), Expect = 1.970e-56 Identity = 107/270 (39.63%), Postives = 170/270 (62.96%), Query Frame = 1
Query: 28 LLPPGVDDIDKEDKQESLCNPDYIESFFQYLRIKEEEWQPTEYIGTIQTDMKPNMRSILVDWLVEVVDEYKLSQKTMYLGINLIDRSLSLFPVPRTKLQLLGCSAMLLAAKFEEIYAPSIDDFVYISDNTYTKEQILNYEQKITQYLNFQLNGVTPYHYLRRFMQASQSGPKEESYVHYILELMMQDYQFVKYPASMQAAACIHLARQTLYKDYSTHWTSQLEFYTGYTSKKLGDIVRKLHSIVESAHEGTLKAVREKYSKKDKHYVSKI 837
+ PP V+DIDK+ + C+ +Y E F Y+R +EE++ + Y+ + Q D+ MR+ILVDW+VEV + ++L+ +T+YL + L+D L++ + R KLQL+G +A+L+A+KFEE P +DDF+YI D+ Y +E+++ E I Q LNF +N PY +LRRF + + + + + YI EL +QDY FV+ AS AA+C+ LA + KD WT+ L Y+GY + L +V++L+ ++ LKAVR KYS + V+K+
Sbjct: 152 VFPPDVEDIDKDSLDDPFCSSEYAEDIFAYMRKREEKFVLSNYMES-QKDVSKEMRAILVDWMVEVQENFELNHETLYLAVKLVDHYLAVSVIVREKLQLIGSTAVLIASKFEERCPPCLDDFLYICDDAYKREELVAMEMDILQKLNFDINIPVPYRFLRRFGKCAHASMETLTLARYICELTLQDYDFVQEGASKMAASCLLLALKM--KDLG-EWTATLRHYSGYPAMDLLPLVKRLNFMIMCQSNEKLKAVRSKYSHRVFFEVAKL 417
BLAST of mRNA_H-akashiwo_Contig1188.2.1 vs. uniprot
Match: Q0IHA4_XENLA (G2/mitotic-specific cyclin-B3 n=2 Tax=Xenopus laevis TaxID=8355 RepID=Q0IHA4_XENLA) HSP 1 Score: 196 bits (497), Expect = 3.070e-56 Identity = 109/281 (38.79%), Postives = 177/281 (62.99%), Query Frame = 1
Query: 7 NTPAKTV----LLPPGVDDIDKEDKQESLCNPDYIESFFQYLRIKEEEWQPTEYIGTIQTDMKPNMRSILVDWLVEVVDEYKLSQKTMYLGINLIDRSLSLFPVPRTKLQLLGCSAMLLAAKFEEIYAPSIDDFVYISDNTYTKEQILNYEQKITQYLNFQLNGVTPYHYLRRFMQASQSGPKEESYVHYILELMMQDYQFVKYPASMQAAACIHLARQTLYKDYSTHWTSQLEFYTGYTSKKLGDIVRKLHSIVESAHEGTLKAVREKYSKKDKHYVSKI 837
+ PAK + +LPPGV+DID++ + N +Y F Y+R +EE++ Y+ +QTD+ +MR+ILVDW+VEV + ++L+ +T+YL + L+D L++ + R KLQL+G +A+L+A+KFEE P +DD +YI D+ Y +++++ E +I Q LNF +N PY +LRRF + + + + + YI EL +Q+Y FV+ AS AA+C+ LA Q K WT L Y+GY +K L +V++L+ ++ TLKAV++KYS + V+K+
Sbjct: 129 SVPAKEIPAEKVLPPGVEDIDQDSLDDPFSNSEYAVDIFSYMRDREEKFLLPNYME-MQTDISKDMRAILVDWIVEVQENFELNHETLYLAVKLVDHYLAVSVIMREKLQLIGSTAVLIASKFEERCPPCVDDILYICDDAYKRDEVVAMEMEILQKLNFDINIPVPYRFLRRFAKCAHATMETLTLARYICELTLQEYDFVQESASKVAASCLLLALQM--KGLGG-WTDTLLHYSGYQTKDLWPLVKRLNFLITYPANETLKAVKDKYSHRVFFEVAKL 405
BLAST of mRNA_H-akashiwo_Contig1188.2.1 vs. uniprot
Match: UPI001AAD949C (G2/mitotic-specific cyclin-B3 n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD949C) HSP 1 Score: 195 bits (496), Expect = 3.740e-56 Identity = 106/272 (38.97%), Postives = 173/272 (63.60%), Query Frame = 1
Query: 31 LPPGVDDIDKEDKQESLCNPDYIESFFQYLRIKEEEWQPTEYIGTIQTDMKPNMRSILVDWLVEVVDEYKLSQKTMYLGINLIDRSLSLFPVPRTKLQLLGCSAMLLAAKFEEIYAPSIDDFVYISDNTYTKEQILNYEQKITQYLNFQLNGVTPYHYLRRFMQASQSGPKEESYVHYILELMMQDYQFVKYPASMQAAACIHLARQTLYKDYSTHWTSQLEFYTGYTSKKLGDIVRKLHSIVESAHEGTLKAVREKYSKKDKHYVSKILAL 846
LP V+DIDK+ + + +Y F Y+R +EE++ YI +Q D+ MR+ILVDW+VEV + ++L+ +T+YL + L+D L+ F + R KLQL+G +A+L+A+KFEE P +DDF+YI D+ Y +E+++ E + Q LNF +N PY +LRRF + + + + + YI EL +Q+Y FV+ AS AA+C++LA + KD WT+ L++Y+GY + L +++KL+S++++ LKAV KY+ + V+K+ AL
Sbjct: 132 LPKDVEDIDKDSMDDPFASSEYALDIFNYMRSREEKFILPNYID-VQRDISKEMRAILVDWVVEVQENFELNHETLYLAVKLVDHYLAAFVIAREKLQLIGSTAVLVASKFEERCPPCLDDFLYICDDAYKREELIAMEMDMLQKLNFDINIPVPYRFLRRFAKCAHANMETLTLARYICELTLQEYDFVQERASKLAASCLYLAMKM--KDLGG-WTATLQYYSGYPATDLLPLMKKLNSLLKNQPNDKLKAVYSKYTHRVFFEVAKLPAL 399
BLAST of mRNA_H-akashiwo_Contig1188.2.1 vs. uniprot
Match: UPI00053B5F40 (cyclin-B1-3-like n=3 Tax=Camelina sativa TaxID=90675 RepID=UPI00053B5F40) HSP 1 Score: 195 bits (496), Expect = 4.320e-56 Identity = 112/263 (42.59%), Postives = 168/263 (63.88%), Query Frame = 1
Query: 49 DIDKEDKQESLCNPDYIESFFQYLRIKEEEWQPTEYIGTIQTDMKPNMRSILVDWLVEVVDEYKLSQKTMYLGINLIDRSLSLFPVPRTKLQLLGCSAMLLAAKFEEIYAPSIDDFVYISDNTYTKEQILNYEQKITQYLNFQLNGVTPYHYLRRFMQASQSGPKEESYVHYILELMMQDYQFVKYPASMQAAACIHLARQTLYKDYSTHWTSQLEFYTGYTSKKLGDIVRKLHSIVESAHEGTLKAVREKYSKKDKHYVSKI 837
DID DK L +Y+E + + + E E +P Y+ T Q ++ MRSIL+DWLVEV +++LS +T+YL +N+IDR LSL PVPR +LQL+G SA+L+A+K+EEI+ P ++D VY++DN+Y +QIL E+ I L + L TPY +L RF++AS S PK ES VH++ EL + Y + + S+ AA+ ++ AR TL K + WT L+F+TGY+ +L D + L + S E L+ V +KYS+ + V+ I
Sbjct: 149 DIDSVDKDNDLAAVEYVEDIYTFYKEVENESKPLMYMHT-QPEINEKMRSILIDWLVEVHVKFELSPETLYLTVNIIDRFLSLKPVPRRELQLVGISALLIASKYEEIWPPQVNDLVYVTDNSYISKQILVMEKTILGSLEWYLTVPTPYVFLVRFIKASGSDPKLESMVHFLAELGLMHYDSLMFCPSILAASAVYTARCTLNK--TPVWTDTLKFHTGYSESQLMDCSKLLAFVHSSVEESRLQGVFKKYSRLGRGAVALI 408
BLAST of mRNA_H-akashiwo_Contig1188.2.1 vs. uniprot
Match: R0G570_9BRAS (Cyclin N-terminal domain-containing protein n=1 Tax=Capsella rubella TaxID=81985 RepID=R0G570_9BRAS) HSP 1 Score: 195 bits (495), Expect = 5.260e-56 Identity = 114/263 (43.35%), Postives = 167/263 (63.50%), Query Frame = 1
Query: 49 DIDKEDKQESLCNPDYIESFFQYLRIKEEEWQPTEYIGTIQTDMKPNMRSILVDWLVEVVDEYKLSQKTMYLGINLIDRSLSLFPVPRTKLQLLGCSAMLLAAKFEEIYAPSIDDFVYISDNTYTKEQILNYEQKITQYLNFQLNGVTPYHYLRRFMQASQSGPKEESYVHYILELMMQDYQFVKYPASMQAAACIHLARQTLYKDYSTHWTSQLEFYTGYTSKKLGDIVRKLHSIVESAHEGTLKAVREKYSKKDKHYVSKI 837
DID EDK L +Y+E + + + E E +P Y+ T Q ++ MRSILVDWLVEV ++ LS +T+YL +N+IDR LSL PVPR +LQL+G SAML+A+K+EEI+ P ++D VY++DN+Y +QIL E+ I L + L T Y +L RF++AS S PK E+ VH++ E+ M + + + SM AA+ ++ AR TL K + WT L+F+TGY+ +L D + L + S E L+ V +KYSK + V+ I
Sbjct: 143 DIDYEDKDNDLAAVEYVEDMYTFYKEVENESRPLMYMHT-QPEINEKMRSILVDWLVEVHLKFDLSPETLYLTVNIIDRFLSLKPVPRRELQLVGVSAMLIASKYEEIWPPQVNDLVYVTDNSYNSKQILVMEKTILGNLEWYLTVPTQYVFLVRFIKASGSDPKLENMVHFLAEIGMMHHDSLMFCPSMLAASAVYTARCTLNK--TPAWTDTLKFHTGYSESQLMDCSKLLAFVHSSVGESKLRGVFKKYSKLGRGAVALI 402 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1188.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1188.2.1 >prot_H-akashiwo_Contig1188.2.1 ID=prot_H-akashiwo_Contig1188.2.1|Name=mRNA_H-akashiwo_Contig1188.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=290bp ADNTPAKTVLLPPGVDDIDKEDKQESLCNPDYIESFFQYLRIKEEEWQPTback to top mRNA from alignment at H-akashiwo_Contig1188:171382..172251- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1188.2.1 ID=mRNA_H-akashiwo_Contig1188.2.1|Name=mRNA_H-akashiwo_Contig1188.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=870bp|location=Sequence derived from alignment at H-akashiwo_Contig1188:171382..172251- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1188:171382..172251- >mRNA_H-akashiwo_Contig1188.2.1 ID=mRNA_H-akashiwo_Contig1188.2.1|Name=mRNA_H-akashiwo_Contig1188.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=870bp|location=Sequence derived from alignment at H-akashiwo_Contig1188:171382..172251- (Heterosigma akashiwo CCMP452)back to top |