mRNA_H-akashiwo_Contig1188.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1188.1.1
Unique NamemRNA_H-akashiwo_Contig1188.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 667 bits (1720), Expect = 1.530e-241
Identity = 325/343 (94.75%), Postives = 336/343 (97.96%), Query Frame = 1
Query:    4 SLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANFERHQKVLHHGF 1032
            SLGFKRSGHES LY HRDGGNELMVAVYVDDLVISGSSQA+VSEFKQSLASKY LTDQGELTQILGIKVVRDK+ KCFHLSQTSFIKDALAKFGLDYLPAC+TP+DHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAF VHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSD+DFCNDRVDG+SVTGYILF GDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLL EMGCPQH+PTPVVEDNSACVEWAND++VNKRNRHFHVSYHLAKEQVSLGTIRMF+IKTHDQVADILTKALNAANFERHQ+VLHHGF
Sbjct:    9 SLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFERHQRVLHHGF 351          
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 339 bits (869), Expect = 2.160e-113
Identity = 167/174 (95.98%), Postives = 170/174 (97.70%), Query Frame = 1
Query:    4 SLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYL 525
            SLGFKRSGHES LY HRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKY+LTDQGELTQILGIKVVRDK+ KCFHLSQTSFIKDALAKFGLDYLPAC+TPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAF VHKLQRTQINPEPKHFEAVQRAFRYL
Sbjct:   95 SLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268          
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 274 bits (701), Expect = 1.150e-80
Identity = 139/345 (40.29%), Postives = 217/345 (62.90%), Query Frame = 1
Query:    1 MSLGFKRSGHESYLYTHRDG-GNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELS--DANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAAN-FERHQKVLH 1023
            +  G+ R+G++S +Y+     G + +++VYVDD+V++ S ++ +S  K++++  Y+++D GE+  ILGIKV RD+  +   LSQ SFI++A  KF +        P++  +D+         LS  +A  +RS+VGT+ W+A WT PE+A+++H L +   +P      A     RYL  T+ + + LGG L L A++DADFC++R  GRS +G+ +F G +PI+WSS++Q  VT +T EAEY++LR+AV D+MWL+ LL  +G  Q    P+ EDN AC+ WAND  V+K  RH HVSYH  KE V    I + ++ T  Q+AD+ TK L+  N F++  +VLH
Sbjct:  652 LQQGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQ-GCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLDFNNGFKKFSRVLH 995          
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A1M2VSW8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VSW8_TRAPU)

HSP 1 Score: 219 bits (559), Expect = 2.110e-64
Identity = 124/331 (37.46%), Postives = 192/331 (58.01%), Query Frame = 1
Query:    7 LGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANL----YRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG-DLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKAL 984
            LGF R+  +  ++  RDG + +++A++VDD +I+GSS  +++E+K+ LA+KY LTD G ++ +LGIKV RD       LSQ ++I+  + +F  D L    TP+D T  L+ +   ++    A +    Y+  +G+L + A  TRP++AFAV  L +   NP   H+EAV+R FRYL GT++ SL  GG    L  + DAD  +     R++TGY+       I WSSK Q  VT ST E+EY+A   A K+ +WLR L+ E+  P  +PT +  D+ + +    D   + R +H  + YH  +  +  G+IR+ +  T D  AD+LTKAL
Sbjct:   96 LGFTRAEADYGVFFKRDGTHLVILAIHVDDCLITGSSTRLLAEYKRQLAAKYKLTDLGPVSWLLGIKVSRDLSAHTLALSQHAYIEAIITRFNFDDLKPISTPMDPTSQLSKSQCPESAADVARMRRVPYKEAIGSLMYAAMGTRPDIAFAVSTLAQFSQNPGWVHWEAVKRVFRYLLGTKTLSLIYGGGQRGLEGYVDADGASQE-HRRAITGYVFLVDGGAISWSSKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFRPLSEPTTLHSDSQSAIALTVDGSYHARTKHIDIRYHFIRYSIDAGSIRLLYCPTADMTADVLTKAL 425          
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY)

HSP 1 Score: 220 bits (560), Expect = 2.580e-64
Identity = 124/343 (36.15%), Postives = 191/343 (55.69%), Query Frame = 1
Query:    7 LGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPT--PGFKAELSDANL--YRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG-DLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANFERHQKVL 1020
            LGF R+  +  ++   D  N  ++A++VDD  I+GSS  ++SE+K+ +  KY LTD GE++ +LGIKV RD++ +   LSQ ++I   LA+F    L     P+D  + LT +  P   A+++      YR  +G+L + A  TRP+++FA+  L +   NP   H+EAV+R FRYL GT++  L+ GG    L  + DAD  +      ++TGY+       + WSSK Q  VT ST EAEY+A   A K+ MW+R LL E+  P   PT +  D+ + +    D   + R +H  + YH  +  V  GT+R+ +  T+D  AD LTKAL +   +   + L
Sbjct:  118 LGFNRAESDYGVFFAIDANNITVLAIHVDDCAITGSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGLEGYVDADGASQE-HRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRRLLGEVFRPLDGPTTLYSDSQSAIALTKDGQYHARTKHIDIRYHFIRYVVEAGTLRLIYCPTNDMTADTLTKALPSPKVKHFARAL 459          
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A0S7JP25_9TELE (POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JP25_9TELE)

HSP 1 Score: 217 bits (552), Expect = 3.370e-64
Identity = 128/340 (37.65%), Postives = 184/340 (54.12%), Query Frame = 1
Query:    1 MSLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRL--GGDLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANFERHQK 1014
            M LGFK+S  +  ++       E+ +AVYVDDL++   S   + E K +L  +Y + D GEL+ ILGI V++DK+  C  L Q  +I+  L K+G+D      TP D +V L    G    + D + Y+SMVG+L + A  TRP++A AV  + +   NP   H  AV+R  RYLKGT + +L+    G+  L  FSDAD+  D  D  S TG I       + W SK Q  V  ST EAEY+AL  A ++  WLR LL ++G     PT ++EDN   +  A + V + R +H  + YH  +E V  G +++ +  T    ADILTK L    FE  ++
Sbjct:   26 MDLGFKQSSSDPCVFVRLSQELEI-IAVYVDDLMLITESTESMDELKLTLQERYKMKDLGELSYILGISVIQDKEKNCICLHQKQYIETILKKYGMDKANPVATPADISVKLKKDDGVSNPV-DPSTYQSMVGSLLYAAMTTRPDIAQAVSAVSKFNANPNTAHLTAVKRILRYLKGTVNLALKFDCAGNKDLIGFSDADWAGDLDDRHSTTGNIFLLSGGAVSWLSKKQATVALSTAEAEYVALSQAAQEGTWLRRLLNDLGMVTK-PTVILEDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQDGEVKLEYCPTDKMKADILTKPLARQKFENFRR 362          
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF)

HSP 1 Score: 216 bits (549), Expect = 4.690e-64
Identity = 114/337 (33.83%), Postives = 196/337 (58.16%), Query Frame = 1
Query:    1 MSLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRL--GGDLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANFER 1005
            M  GF +   E  L+   +GGN L++++YVDDL+ + +S++++  FK+S+  ++ +TD G++   LG++V++D+ G    +SQ  +  + L K+G+    A R P+     LT       E  D   Y+ +VG+L ++   TRP+L ++V+ + R   NP  +H  AV+   RY+KGT    ++   GG+  L  + D+D+  D  D +S +G+   +G   + WSSK Q  VT ST EAEY+A  +     +W+R++L E+G  Q D T +  DNS+ ++ + +LV++ R++H HV +H  +E V+ G I   +  TH+Q+ADI+TK +    FE+
Sbjct:    1 MREGFVKCYCEHTLFVKTEGGNSLIISLYVDDLIYTSNSESMLDSFKKSMQEEFSMTDLGKMKYCLGVEVIQDEAG--IFISQRKYALETLKKYGMQDCNAVRNPMVPGNKLTKRGA--GEEVDPTAYKQLVGSLRYLTA-TRPDLIYSVNVVSRYMENPREEHMMAVKHIMRYVKGTAGFGIQYLCGGEEKLVGYVDSDYAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADIMTKPVKLEVFEK 332          
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: UPI000CD8E793 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD8E793)

HSP 1 Score: 217 bits (553), Expect = 5.690e-64
Identity = 126/335 (37.61%), Postives = 187/335 (55.82%), Query Frame = 1
Query:    1 MSLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG--DLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANF 999
             SLGF  S ++S L+T       +++ +YVDD++I+GS    + + KQSL+S +++ D G L   LG++V+    G   +LSQ  +  D +++ G+       TP+D    L+P  G  + LSD  LYR +VG+L ++   TRP+LAFAVH + +   +P   H+ AV R  RY+KGT    L       L LRAFSDAD+  D  D RS TG+  F GD  I W SK Q  V  S+ EAEY AL    ++++WLR LL++MG     PT +  DN++ ++ A + V ++R +H  +  H  ++ V   TI +    + DQ ADI TKA     F
Sbjct:   57 QSLGFTASNYDSGLFTKTTTSGTILLILYVDDMIITGSDAHGILDLKQSLSSYFEMKDLGLLHYFLGLEVLPHDTG--IYLSQAKYASDIISRAGITDCKVANTPLDPNFHLSPGDG--SLLSDPTLYRQLVGSLIYLTV-TRPDLAFAVHIVSQFMASPRTTHYIAVLRILRYIKGTIFHGLYFSSTSSLELRAFSDADWDGDITDRRSTTGFCFFLGDLLISWRSKKQSLVARSSTEAEYRALADTTQELVWLRWLLSDMGLSLSSPTVIWCDNTSAIQIAYNDVFHERTKHIEIDCHFVRQHVIRNTITLSPSSSTDQPADIFTKAHRPRRF 386          
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A2K3MW90_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MW90_TRIPR)

HSP 1 Score: 225 bits (574), Expect = 1.450e-62
Identity = 124/334 (37.13%), Postives = 190/334 (56.89%), Query Frame = 1
Query:    7 LGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGD--LVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANFE 1002
             GF  S H+S L+T R     +++ +YVDD++I+G  +  +S  +Q L+  +++ D G L+  LG++V +D  G  ++LSQ  +  D L++ G+       TP++    LTP  G    L DA  YR +VG+L ++   TRP++A+AVHK+ +    P   HF AV R  RY+KGT    LR   +  LVL  +SDAD+  D  D  S TGY  F G + I W SK Q  V+ S+ E+EY AL  A  +++WLR LL +MG  Q   T +  DN + ++ +++ V ++R +H  +  HL +  V+ GTIR+  I + DQ ADI TK  +   F+
Sbjct:  784 FGFLSSPHDSALFTRRSDSGIVILLLYVDDMIITGDDKTGISALQQYLSQHFEMKDLGSLSYFLGLEVSQDSDG--YYLSQAKYASDLLSRAGITDCKTELTPLEVNCKLTPLDG--TPLEDATRYRQLVGSLVYLTV-TRPDIAYAVHKVSQFMAAPRSSHFSAVLRIIRYVKGTLFHGLRFSANSSLVLSGYSDADWGGDPTDRCSTTGYCFFLGSSLISWRSKKQTVVSRSSTESEYRALADAASELLWLRWLLEDMGVTQSSATTLHCDNKSAIQISHNDVFHERTKHIEIDCHLVRYHVTKGTIRLISIPSVDQTADIFTKTHHPMRFK 1112          
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A6A4F359_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F359_9STRA)

HSP 1 Score: 213 bits (542), Expect = 2.660e-62
Identity = 115/335 (34.33%), Postives = 190/335 (56.72%), Query Frame = 1
Query:    4 SLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANL----YRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDL--VLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNA 990
            S+GF+ +  +  +YT  +G +E +V +YVDD++I+   +A+++  K  +A K+ + D G    ILGI++  D + +   +SQ ++ +  + KFG +    C TP++  V LT     + E   A +    YRS+VG+L ++A  TRP+++ AV KL R   NP  KH++A  +  RYL  T+   +   G L   L A+SDAD+  +R D RSV+G +L    AP+VW S  Q  V  S+ EAEY+AL   VK+ +W+R LL ++G  Q   T   EDN   +  A ++      +H  + YH  +E+V +  + + ++ T +Q+AD +TK L++
Sbjct:   50 SMGFEPADADPCVYTRGEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQIEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADWAGNRDDRRSVSGMLLMMCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLNDIGAEQVGATVRYEDNQGAMALAKNVGYQAHTKHIDIRYHFIREKVVINEVELEYVDTKNQLADFMTKGLSS 384          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DD78_HETAK1.530e-24194.75Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6S2_HETAK2.160e-11395.98Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y1P1_HETAK1.150e-8040.29Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A1M2VSW8_TRAPU2.110e-6437.46Retrovirus-related Pol polyprotein from transposon... [more]
A0A4S4K468_9APHY2.580e-6436.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0S7JP25_9TELE3.370e-6437.65POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 R... [more]
UPI0006A737CF4.690e-6433.83uncharacterized mitochondrial protein AtMg00810-li... [more]
UPI000CD8E7935.690e-6437.61uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A2K3MW90_TRIPR1.450e-6237.13Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A4F359_9STRA2.660e-6234.33Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1188contigH-akashiwo_Contig1188:165924..166964 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog67593.Physo132654
PFAMsDUF4219,RVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size1041
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.82e-59
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QHJF@4776|Peronosporales
Descriptiongag-polypeptide of LTR copia-type
Cds size1041
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387110.4904704-CDS-H-akashiwo_Contig1188:165923..1669641681387110.4904704-CDS-H-akashiwo_Contig1188:165923..166964Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1188 165924..166964 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1188.1.1prot_H-akashiwo_Contig1188.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1188 165924..166964 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1188.1.1

>prot_H-akashiwo_Contig1188.1.1 ID=prot_H-akashiwo_Contig1188.1.1|Name=mRNA_H-akashiwo_Contig1188.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=347bp
MSLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSL
ASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLP
ACRTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAV
HKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDADFC
NDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDI
MWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLA
KEQVSLGTIRMFFIKTHDQVADILTKALNAANFERHQKVLHHGFSG*
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mRNA from alignment at H-akashiwo_Contig1188:165924..166964-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1188.1.1 ID=mRNA_H-akashiwo_Contig1188.1.1|Name=mRNA_H-akashiwo_Contig1188.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1041bp|location=Sequence derived from alignment at H-akashiwo_Contig1188:165924..166964- (Heterosigma akashiwo CCMP452)
ATGTCGCTGGGATTCAAGCGTAGTGGGCATGAGTCTTACCTGTATACTCA TCGTGATGGGGGCAATGAGCTGATGGTTGCCGTTTACGTTGATGATTTGG TGATCAGTGGCAGCTCTCAAGCTATTGTCTCTGAATTTAAGCAGTCTCTT GCGTCCAAGTACGATCTCACTGATCAGGGGGAACTCACCCAAATTCTTGG CATCAAGGTCGTTCGCGATAAGCAGGGCAAGTGTTTCCATCTTTCCCAGA CCTCTTTTATCAAGGACGCACTGGCCAAGTTCGGGCTCGATTATCTTCCG GCGTGCAGAACACCTATCGATCACACTGTGGATCTCACACCTACTCCTGG GTTTAAAGCGGAGCTCTCCGATGCGAACTTATACAGGTCTATGGTTGGAA CGCTGGCCTGGGTTGCGAACTGGACAAGGCCGGAGCTTGCTTTTGCGGTC CACAAGCTTCAGCGTACTCAAATTAATCCGGAGCCCAAGCATTTTGAGGC AGTCCAGCGTGCATTTCGATACCTCAAGGGCACTCAGTCTGAATCCCTTC GGCTGGGTGGTGATCTGGTGCTACGAGCGTTTTCTGATGCGGATTTCTGT AATGACCGTGTTGATGGGAGGTCGGTTACCGGCTATATTCTCTTTTGGGG TGATGCGCCTATTGTCTGGTCTTCAAAACTTCAGGGTGCTGTCACTACCT CTACTGTGGAAGCTGAGTATTTGGCTCTCCGTTCGGCGGTTAAGGACATC ATGTGGCTTCGCTCTCTTCTTGCTGAAATGGGGTGTCCTCAGCATGATCC CACTCCTGTTGTGGAAGACAACAGTGCCTGTGTTGAGTGGGCGAATGACT TGGTGGTTAATAAAAGAAATAGACACTTCCATGTGTCTTATCATCTTGCT AAGGAGCAGGTGAGCCTTGGCACTATCAGGATGTTTTTCATTAAAACTCA TGATCAGGTGGCTGATATTCTGACCAAGGCCCTAAATGCAGCTAACTTTG AGAGGCACCAGAAGGTGCTGCATCATGGTTTCAGTGGATGA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1188:165924..166964-

>mRNA_H-akashiwo_Contig1188.1.1 ID=mRNA_H-akashiwo_Contig1188.1.1|Name=mRNA_H-akashiwo_Contig1188.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1041bp|location=Sequence derived from alignment at H-akashiwo_Contig1188:165924..166964- (Heterosigma akashiwo CCMP452)
ATGTCGCTGGGATTCAAGCGTAGTGGGCATGAGTCTTACCTGTATACTCA
TCGTGATGGGGGCAATGAGCTGATGGTTGCCGTTTACGTTGATGATTTGG
TGATCAGTGGCAGCTCTCAAGCTATTGTCTCTGAATTTAAGCAGTCTCTT
GCGTCCAAGTACGATCTCACTGATCAGGGGGAACTCACCCAAATTCTTGG
CATCAAGGTCGTTCGCGATAAGCAGGGCAAGTGTTTCCATCTTTCCCAGA
CCTCTTTTATCAAGGACGCACTGGCCAAGTTCGGGCTCGATTATCTTCCG
GCGTGCAGAACACCTATCGATCACACTGTGGATCTCACACCTACTCCTGG
GTTTAAAGCGGAGCTCTCCGATGCGAACTTATACAGGTCTATGGTTGGAA
CGCTGGCCTGGGTTGCGAACTGGACAAGGCCGGAGCTTGCTTTTGCGGTC
CACAAGCTTCAGCGTACTCAAATTAATCCGGAGCCCAAGCATTTTGAGGC
AGTCCAGCGTGCATTTCGATACCTCAAGGGCACTCAGTCTGAATCCCTTC
GGCTGGGTGGTGATCTGGTGCTACGAGCGTTTTCTGATGCGGATTTCTGT
AATGACCGTGTTGATGGGAGGTCGGTTACCGGCTATATTCTCTTTTGGGG
TGATGCGCCTATTGTCTGGTCTTCAAAACTTCAGGGTGCTGTCACTACCT
CTACTGTGGAAGCTGAGTATTTGGCTCTCCGTTCGGCGGTTAAGGACATC
ATGTGGCTTCGCTCTCTTCTTGCTGAAATGGGGTGTCCTCAGCATGATCC
CACTCCTGTTGTGGAAGACAACAGTGCCTGTGTTGAGTGGGCGAATGACT
TGGTGGTTAATAAAAGAAATAGACACTTCCATGTGTCTTATCATCTTGCT
AAGGAGCAGGTGAGCCTTGGCACTATCAGGATGTTTTTCATTAAAACTCA
TGATCAGGTGGCTGATATTCTGACCAAGGCCCTAAATGCAGCTAACTTTG
AGAGGCACCAGAAGGTGCTGCATCATGGTTTCAGTGGATGA
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