mRNA_H-akashiwo_Contig1188.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 667 bits (1720), Expect = 1.530e-241 Identity = 325/343 (94.75%), Postives = 336/343 (97.96%), Query Frame = 1
Query: 4 SLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANFERHQKVLHHGF 1032
SLGFKRSGHES LY HRDGGNELMVAVYVDDLVISGSSQA+VSEFKQSLASKY LTDQGELTQILGIKVVRDK+ KCFHLSQTSFIKDALAKFGLDYLPAC+TP+DHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAF VHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSD+DFCNDRVDG+SVTGYILF GDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLL EMGCPQH+PTPVVEDNSACVEWAND++VNKRNRHFHVSYHLAKEQVSLGTIRMF+IKTHDQVADILTKALNAANFERHQ+VLHHGF
Sbjct: 9 SLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNAANFERHQRVLHHGF 351
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 339 bits (869), Expect = 2.160e-113 Identity = 167/174 (95.98%), Postives = 170/174 (97.70%), Query Frame = 1
Query: 4 SLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYL 525
SLGFKRSGHES LY HRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKY+LTDQGELTQILGIKVVRDK+ KCFHLSQTSFIKDALAKFGLDYLPAC+TPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAF VHKLQRTQINPEPKHFEAVQRAFRYL
Sbjct: 95 SLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 274 bits (701), Expect = 1.150e-80 Identity = 139/345 (40.29%), Postives = 217/345 (62.90%), Query Frame = 1
Query: 1 MSLGFKRSGHESYLYTHRDG-GNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELS--DANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAAN-FERHQKVLH 1023
+ G+ R+G++S +Y+ G + +++VYVDD+V++ S ++ +S K++++ Y+++D GE+ ILGIKV RD+ + LSQ SFI++A KF + P++ +D+ LS +A +RS+VGT+ W+A WT PE+A+++H L + +P A RYL T+ + + LGG L L A++DADFC++R GRS +G+ +F G +PI+WSS++Q VT +T EAEY++LR+AV D+MWL+ LL +G Q P+ EDN AC+ WAND V+K RH HVSYH KE V I + ++ T Q+AD+ TK L+ N F++ +VLH
Sbjct: 652 LQQGYTRNGYDSCVYSKVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQ-GCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLDFNNGFKKFSRVLH 995
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A1M2VSW8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VSW8_TRAPU) HSP 1 Score: 219 bits (559), Expect = 2.110e-64 Identity = 124/331 (37.46%), Postives = 192/331 (58.01%), Query Frame = 1
Query: 7 LGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANL----YRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG-DLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKAL 984
LGF R+ + ++ RDG + +++A++VDD +I+GSS +++E+K+ LA+KY LTD G ++ +LGIKV RD LSQ ++I+ + +F D L TP+D T L+ + ++ A + Y+ +G+L + A TRP++AFAV L + NP H+EAV+R FRYL GT++ SL GG L + DAD + R++TGY+ I WSSK Q VT ST E+EY+A A K+ +WLR L+ E+ P +PT + D+ + + D + R +H + YH + + G+IR+ + T D AD+LTKAL
Sbjct: 96 LGFTRAEADYGVFFKRDGTHLVILAIHVDDCLITGSSTRLLAEYKRQLAAKYKLTDLGPVSWLLGIKVSRDLSAHTLALSQHAYIEAIITRFNFDDLKPISTPMDPTSQLSKSQCPESAADVARMRRVPYKEAIGSLMYAAMGTRPDIAFAVSTLAQFSQNPGWVHWEAVKRVFRYLLGTKTLSLIYGGGQRGLEGYVDADGASQE-HRRAITGYVFLVDGGAISWSSKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFRPLSEPTTLHSDSQSAIALTVDGSYHARTKHIDIRYHFIRYSIDAGSIRLLYCPTADMTADVLTKAL 425
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY) HSP 1 Score: 220 bits (560), Expect = 2.580e-64 Identity = 124/343 (36.15%), Postives = 191/343 (55.69%), Query Frame = 1
Query: 7 LGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPT--PGFKAELSDANL--YRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG-DLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANFERHQKVL 1020
LGF R+ + ++ D N ++A++VDD I+GSS ++SE+K+ + KY LTD GE++ +LGIKV RD++ + LSQ ++I LA+F L P+D + LT + P A+++ YR +G+L + A TRP+++FA+ L + NP H+EAV+R FRYL GT++ L+ GG L + DAD + ++TGY+ + WSSK Q VT ST EAEY+A A K+ MW+R LL E+ P PT + D+ + + D + R +H + YH + V GT+R+ + T+D AD LTKAL + + + L
Sbjct: 118 LGFNRAESDYGVFFAIDANNITVLAIHVDDCAITGSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRGLEGYVDADGASQE-HRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRRLLGEVFRPLDGPTTLYSDSQSAIALTKDGQYHARTKHIDIRYHFIRYVVEAGTLRLIYCPTNDMTADTLTKALPSPKVKHFARAL 459
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A0S7JP25_9TELE (POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JP25_9TELE) HSP 1 Score: 217 bits (552), Expect = 3.370e-64 Identity = 128/340 (37.65%), Postives = 184/340 (54.12%), Query Frame = 1
Query: 1 MSLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRL--GGDLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANFERHQK 1014
M LGFK+S + ++ E+ +AVYVDDL++ S + E K +L +Y + D GEL+ ILGI V++DK+ C L Q +I+ L K+G+D TP D +V L G + D + Y+SMVG+L + A TRP++A AV + + NP H AV+R RYLKGT + +L+ G+ L FSDAD+ D D S TG I + W SK Q V ST EAEY+AL A ++ WLR LL ++G PT ++EDN + A + V + R +H + YH +E V G +++ + T ADILTK L FE ++
Sbjct: 26 MDLGFKQSSSDPCVFVRLSQELEI-IAVYVDDLMLITESTESMDELKLTLQERYKMKDLGELSYILGISVIQDKEKNCICLHQKQYIETILKKYGMDKANPVATPADISVKLKKDDGVSNPV-DPSTYQSMVGSLLYAAMTTRPDIAQAVSAVSKFNANPNTAHLTAVKRILRYLKGTVNLALKFDCAGNKDLIGFSDADWAGDLDDRHSTTGNIFLLSGGAVSWLSKKQATVALSTAEAEYVALSQAAQEGTWLRRLLNDLGMVTK-PTVILEDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQDGEVKLEYCPTDKMKADILTKPLARQKFENFRR 362
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF) HSP 1 Score: 216 bits (549), Expect = 4.690e-64 Identity = 114/337 (33.83%), Postives = 196/337 (58.16%), Query Frame = 1
Query: 1 MSLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRL--GGDLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANFER 1005
M GF + E L+ +GGN L++++YVDDL+ + +S++++ FK+S+ ++ +TD G++ LG++V++D+ G +SQ + + L K+G+ A R P+ LT E D Y+ +VG+L ++ TRP+L ++V+ + R NP +H AV+ RY+KGT ++ GG+ L + D+D+ D D +S +G+ +G + WSSK Q VT ST EAEY+A + +W+R++L E+G Q D T + DNS+ ++ + +LV++ R++H HV +H +E V+ G I + TH+Q+ADI+TK + FE+
Sbjct: 1 MREGFVKCYCEHTLFVKTEGGNSLIISLYVDDLIYTSNSESMLDSFKKSMQEEFSMTDLGKMKYCLGVEVIQDEAG--IFISQRKYALETLKKYGMQDCNAVRNPMVPGNKLTKRGA--GEEVDPTAYKQLVGSLRYLTA-TRPDLIYSVNVVSRYMENPREEHMMAVKHIMRYVKGTAGFGIQYLCGGEEKLVGYVDSDYAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADIMTKPVKLEVFEK 332
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: UPI000CD8E793 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD8E793) HSP 1 Score: 217 bits (553), Expect = 5.690e-64 Identity = 126/335 (37.61%), Postives = 187/335 (55.82%), Query Frame = 1
Query: 1 MSLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG--DLVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANF 999
SLGF S ++S L+T +++ +YVDD++I+GS + + KQSL+S +++ D G L LG++V+ G +LSQ + D +++ G+ TP+D L+P G + LSD LYR +VG+L ++ TRP+LAFAVH + + +P H+ AV R RY+KGT L L LRAFSDAD+ D D RS TG+ F GD I W SK Q V S+ EAEY AL ++++WLR LL++MG PT + DN++ ++ A + V ++R +H + H ++ V TI + + DQ ADI TKA F
Sbjct: 57 QSLGFTASNYDSGLFTKTTTSGTILLILYVDDMIITGSDAHGILDLKQSLSSYFEMKDLGLLHYFLGLEVLPHDTG--IYLSQAKYASDIISRAGITDCKVANTPLDPNFHLSPGDG--SLLSDPTLYRQLVGSLIYLTV-TRPDLAFAVHIVSQFMASPRTTHYIAVLRILRYIKGTIFHGLYFSSTSSLELRAFSDADWDGDITDRRSTTGFCFFLGDLLISWRSKKQSLVARSSTEAEYRALADTTQELVWLRWLLSDMGLSLSSPTVIWCDNTSAIQIAYNDVFHERTKHIEIDCHFVRQHVIRNTITLSPSSSTDQPADIFTKAHRPRRF 386
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A2K3MW90_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MW90_TRIPR) HSP 1 Score: 225 bits (574), Expect = 1.450e-62 Identity = 124/334 (37.13%), Postives = 190/334 (56.89%), Query Frame = 1
Query: 7 LGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGD--LVLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNAANFE 1002
GF S H+S L+T R +++ +YVDD++I+G + +S +Q L+ +++ D G L+ LG++V +D G ++LSQ + D L++ G+ TP++ LTP G L DA YR +VG+L ++ TRP++A+AVHK+ + P HF AV R RY+KGT LR + LVL +SDAD+ D D S TGY F G + I W SK Q V+ S+ E+EY AL A +++WLR LL +MG Q T + DN + ++ +++ V ++R +H + HL + V+ GTIR+ I + DQ ADI TK + F+
Sbjct: 784 FGFLSSPHDSALFTRRSDSGIVILLLYVDDMIITGDDKTGISALQQYLSQHFEMKDLGSLSYFLGLEVSQDSDG--YYLSQAKYASDLLSRAGITDCKTELTPLEVNCKLTPLDG--TPLEDATRYRQLVGSLVYLTV-TRPDIAYAVHKVSQFMAAPRSSHFSAVLRIIRYVKGTLFHGLRFSANSSLVLSGYSDADWGGDPTDRCSTTGYCFFLGSSLISWRSKKQTVVSRSSTESEYRALADAASELLWLRWLLEDMGVTQSSATTLHCDNKSAIQISHNDVFHERTKHIEIDCHLVRYHVTKGTIRLISIPSVDQTADIFTKTHHPMRFK 1112
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Match: A0A6A4F359_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F359_9STRA) HSP 1 Score: 213 bits (542), Expect = 2.660e-62 Identity = 115/335 (34.33%), Postives = 190/335 (56.72%), Query Frame = 1
Query: 4 SLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYDLTDQGELTQILGIKVVRDKQGKCFHLSQTSFIKDALAKFGLDYLPACRTPIDHTVDLTPTPGFKAELSDANL----YRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDL--VLRAFSDADFCNDRVDGRSVTGYILFWGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLVVNKRNRHFHVSYHLAKEQVSLGTIRMFFIKTHDQVADILTKALNA 990
S+GF+ + + +YT +G +E +V +YVDD++I+ +A+++ K +A K+ + D G ILGI++ D + + +SQ ++ + + KFG + C TP++ V LT + E A + YRS+VG+L ++A TRP+++ AV KL R NP KH++A + RYL T+ + G L L A+SDAD+ +R D RSV+G +L AP+VW S Q V S+ EAEY+AL VK+ +W+R LL ++G Q T EDN + A ++ +H + YH +E+V + + + ++ T +Q+AD +TK L++
Sbjct: 50 SMGFEPADADPCVYTRGEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQIEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQLEAYSDADWAGNRDDRRSVSGMLLMMCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLNDIGAEQVGATVRYEDNQGAMALAKNVGYQAHTKHIDIRYHFIREKVVINEVELEYVDTKNQLADFMTKGLSS 384 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1188.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1188.1.1 >prot_H-akashiwo_Contig1188.1.1 ID=prot_H-akashiwo_Contig1188.1.1|Name=mRNA_H-akashiwo_Contig1188.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=347bp MSLGFKRSGHESYLYTHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLback to top mRNA from alignment at H-akashiwo_Contig1188:165924..166964- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1188.1.1 ID=mRNA_H-akashiwo_Contig1188.1.1|Name=mRNA_H-akashiwo_Contig1188.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1041bp|location=Sequence derived from alignment at H-akashiwo_Contig1188:165924..166964- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1188:165924..166964- >mRNA_H-akashiwo_Contig1188.1.1 ID=mRNA_H-akashiwo_Contig1188.1.1|Name=mRNA_H-akashiwo_Contig1188.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1041bp|location=Sequence derived from alignment at H-akashiwo_Contig1188:165924..166964- (Heterosigma akashiwo CCMP452)back to top |