mRNA_H-akashiwo_Contig1183.10.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1183.10.1 vs. uniprot
Match: A0A7S4DBW5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBW5_HETAK) HSP 1 Score: 264 bits (675), Expect = 1.220e-82 Identity = 125/160 (78.12%), Postives = 142/160 (88.75%), Query Frame = 1
Query: 964 PDKKIWAHAIVQQLGKWQKRGIGTLVKRQPGMEVVRIRWVFQWKSDGRAKARIAAKGFDQTLGVSYSESFSPTLKMTSLRLFFHLCVEHGLEIFSDDVVAAFISSSLGEDEVYLQVPEGFDCPEGYVLKLRCAVEGVKQSSAKWTTKVDRILDHQGFKAV 1443
PD IWA A+++QLGKWQKRGIGTL++R+PGMEV+R RWVF WK DGRAKARIAAKGFDQTLGVSYSESFSPTLKMTSLRLF HLCVE+ L+++ DDVVAAFISS LGEDEVYL+VPEGFDCP GYVL LR AVEG+KQ+SAKWT K+D IL +GF+ V
Sbjct: 1 PDSDIWAKAMMEQLGKWQKRGIGTLIQRKPGMEVIRTRWVFAWKDDGRAKARIAAKGFDQTLGVSYSESFSPTLKMTSLRLFLHLCVEYDLDMYMDDVVAAFISSELGEDEVYLEVPEGFDCPPGYVLHLRAAVEGLKQASAKWTRKIDGILTTEGFQPV 160
BLAST of mRNA_H-akashiwo_Contig1183.10.1 vs. uniprot
Match: A0A6S7IKL3_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IKL3_PARCT) HSP 1 Score: 209 bits (532), Expect = 5.690e-55 Identity = 170/577 (29.46%), Postives = 269/577 (46.62%), Query Frame = 1
Query: 1 GYSCFMTLTDDATRYMVVYLLKKKKNEALAKYKAYCAGVWTRFGVSVKVYHGDNDPVTLGCKAFEAFLQQQGTEVSPTDVDAPKRNARAEISGRYVMEKARCLLIQANLPEACWPFAVPYAARLRNSTLHRALDPSTTPHEQWHGEEPDLGYLHVFGCFCAVTVVRQSRGSKMMSRAKPGLFVGLDGSMPPRYLVLDCQGAKVTTSTAVVFDDNVLPGLGAKSLWAAHENLVREMRDSGKLRGGSGVRLPLPRAWPKGGRSPVAHSPTSARGGGKTAVEYRDAR--SYKKRDAVAVSHRVAAAAMAEAPSKHTPQSYKEAMSGPDKKIWAHAIVQQLGKWQKRGIGTLVKRQPGMEVVRIRWVFQWKSDGRA-----KARIAAKGFDQTLGVSYSESFSPTLKMTSLRLFFHLCVEHGLEIFSDDVVAAFISSSLGEDEVYLQVPEGF--DCPEGYVLKLRCAVEGVKQSSAKWTTKVDRILDHQGFKAVDAEVCLYYKVTDGLLCLVARYVDDTLSGVHPSQKWVYDALIEAIMAARLELHRLGNAVGQKFLSIQTNWKPGSRILVLDQKDYVRAL 1704
G F+TL DD T Y+ VY+LK K +E K+ + A V G VKV+ DN+ + FE +L+++G T PK+N AE R ++E R +L A LP W +P A LRN + A+ TP E W ++P++ +L FGC V + R K+ S+A+ + +G G+ Y + D A+V S V F+++ K LV L P PV + + T RD R +Y A A +H K+ P++ KEA+S P K W A+ +++ + + LV+ + V +WVF+ K+D KAR+ A+GF QT G Y E+FSP + S+R L +HGL++ DV AF++ L E EVY++ PEGF E V +LR ++ G+K+S W + +DR L + GF + C+Y K G + ++A YVDD L QK + + ++ +A + ++ +G FL ++ KP S+ + + Q+ Y +++
Sbjct: 235 GTEYFLTLIDDHTHYVWVYVLKHK-DEVFGKFLEWKALVEKSSGRKVKVFRTDNEGEYTSTE-FENYLKKEGVTHQLTVPKTPKQNGVAERMNRTLVESVRSMLADAKLPHKFWAETLPTAVYLRNRSPSVAVK-GKTPFEAWTSQKPNVKHLREFGCEAYAHVPKDER-KKLDSKARKCILLGY-GTETKGYRLYDPNRARVFHSRDVQFNESSQEPEVVKVQEPKQNTLVE-----------------LEFEEPIDVEEPVVNEEPEPQ---VTRRSERDRRPPAYYGEWATAANH-----------DKNEPRTVKEALSSPQKAKWVKAMEKEMESLKTNEVWNLVELPENRKAVGSKWVFRIKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKE-EVYMKQPEGFIEKGKEHLVCRLRRSIYGLKKSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKEEGGEIFIIAVYVDDILLAGKNDQK-INE--VKQALAEQFQMKDMGQL--HYFLGVKVIQKPDSKEIWIGQEAYTKSV 769
BLAST of mRNA_H-akashiwo_Contig1183.10.1 vs. uniprot
Match: A0A1Y1N3X2_PHOPY (Uncharacterized protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3X2_PHOPY) HSP 1 Score: 204 bits (518), Expect = 1.690e-52 Identity = 179/595 (30.08%), Postives = 290/595 (48.74%), Query Frame = 1
Query: 1 GYSCFMTLTDDATRYMVVYLLKKKKNEALAKYKAYCAGVWTRFGVSVKVYHGDNDPVTLGCKAFEAFLQQQGTEVSPTDVDAPKRNARAEISGRYVMEKARCLLIQANLPEACWPFAVPYAARLRNSTLHRALDPSTTPHEQWHGEEPDLGYLHVFGCFCAVTVVRQSRGSKMMSRAKPGLFVGLDGSMPPRYLVLDCQGAKVTTSTAVVFDDNV------LPGLGAKSLWAAHE--NLVREMRDSGKL------RGGSGVRLPLPRAWPKGGRSPVAHSPTSARGGGK-------TAVEYRDAR-SYKKRDAVAVSHRVAAAAMAEAPSKHTPQSYKEAMSGPDKKIWAHAIVQQLGKWQKRGIGTLVKRQPGMEVVRIRWVFQWK---SDGRAKARIAAKGFDQTLGVSYSESFSPTLKMTSLRLFFHLCVEHGLEIFSDDVVAAFISSSLGEDEVYLQVPEGFDCPE--GYVLKLRCAVEGVKQSSAKWTTKVDRILDHQGFKAVDAEVCLYYKVTDGLLCLVARYVDDTLSGVHPSQKWVYDALIEAIMAARLELHRLGNAVGQKFLSIQTNWKPGSRILVLDQKDYVRAL 1704
G F++ DD +RY +YLL K +E K K + A V +FG KV DN G +A ++ L++ G + T P++N +E R ++E ARC+L+ A LP W +V A L N +A D TP+E W G++P+L +L FG + V +Q R SK+ +AK G+ +G + Y +LD KVT S V F++ + + G +++ ++ N +RE ++ + + V + P + G K T + R R S KK V++ V M E S + P+S EAMS PD W +A+ ++ K TLV +V+ +WVF K S R KAR+ AKGF Q G+ Y E+FSP ++ ++R+ F + V L I+ DV AF++ ++ + ++Y+ PEGF C + V L+ A+ G+KQSS W KV+++L FK E C+++K+ D + ++A YVDD L + S + + ++ ++ +L LG + FL + + K S ++ ++QKDY+ L
Sbjct: 482 GKFYFVSFIDDYSRYTKIYLLASK-DEVAVKLKEFLAEVKNQFGKYPKVLRSDNGGEYTG-EAVQSVLKRNGIQFQSTVPYCPEQNGVSERKNRTLVESARCMLLDAKLPYKYWGESVVTANYLTNRFPTQAKD--KTPYELWVGKKPNLEHLVTFGSQAFIYVPKQKR-SKLEPKAKEGIMIGYSDTSKG-YRILDPITDKVTISRTVKFNEYLNEPFQEVKGCNSQTTTVMYQSNNDLRETKEPEQNIQKIMETEDAEVEIKDEETIPVEFLDDTSDGEEGDDGNAKEVAKDTETQIVTRAGRISKKKCFKDYVTYNVFDNIMPEMES-YDPKSVNEAMSRPDHLKWKNAMEREYESLIKNQAWTLVDCPEDKTIVQNKWVFCVKKASSGVRYKARLVAKGFTQQYGIDYLETFSPVVRNATIRILFSMAVNLNLLIYHLDVETAFLNGNI-DQQIYMAQPEGFVCKKDPNKVCLLKKAIYGLKQSSRIWNLKVEKVLVKMNFKQSAYEPCIFFKIVDSSIVIIALYVDDFL--ICSSSSSLKED-VKQDLSKEFKLKDLG--LINHFLGLNVDCKI-SNVIRVNQKDYILEL 1062
BLAST of mRNA_H-akashiwo_Contig1183.10.1 vs. uniprot
Match: A0A1Y3EBW8_9BILA (Integrase core domain protein n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A1Y3EBW8_9BILA) HSP 1 Score: 193 bits (490), Expect = 2.790e-49 Identity = 172/588 (29.25%), Postives = 268/588 (45.58%), Query Frame = 1
Query: 1 GYSCFMTLTDDATRYMVVYLLKKKKNEALAKYKAYCAGVWTRFGVSVKVYHGDNDPVTLGCKAFEAFLQQQGTEVSPTDVDAPKRNARAEISGRYVMEKARCLLIQANLPEACWPFAVPYAARLRNSTLHRALDPSTTPHEQWHGEEPDLGYLHVFGCFCAVTVVRQSRGSKMMSRAKPGLFVGLDGSMPPRYLVLDCQGAKVTTSTAVVFDDNVLPGLGAKSLWAAHENLVREMRDSGKL-----RGGSGVRLPLPRAWPKG--------GRSPVAHSPTSARGGGKTAVEYRDARSYKKRDAVAVSHRVAAAAMAEAPSKHTPQSYKEAMSGPDKKIWAHAIVQQLGKWQKRGIGTLVKRQPGMEVVRIRWVFQ--WKSDG---RAKARIAAKGFDQTLGVSYSESFSPTLKMTSLRLFFHLCVEHGLEIFSDDVVAAFISSSLGEDEVYLQVPEGFDCPEGYVLKLRCAVEGVKQSSAKWTTKVDRILDHQGFKAVDAEVCLYYKVTDGLLCLVARYVDDTL--SGVHPSQKWVYDALIEAIMAARLELHRLGNAVGQKFLSIQTNWKPGSRILVLDQKDYVRAL 1704
G F++ DD +R Y LK K NEAL K+K + A V + VK DN + F FL ++G T + P++N AE R ++EKAR +LI ANL W AV A LRN +AL P E W G +P+L +L VFGC V V R K +++ +FVG + Y +DC+ K+ + V F ++ PG A + + + ++ + + GS P P PK G+SP TS + + R+ D + +V + SY+EA++ PD K W AI ++L + P + ++ +WVF+ +K D + KAR+ A+G+ Q G+ Y ++F+PTL +SLR L ++ LE+ DVV AF++ SL E E+Y+++P G +LR ++ G+KQ+S W +D L G + E C+Y+ + + V YVDD L S S+ + AL E R ++ LG A + I + + G+ L +DQ+ Y+ L
Sbjct: 193 GARYFLSFIDDFSRKSFAYFLKHK-NEALPKFKDFIAMVERQTSKRVKCLRTDNGREYVN-NMFAEFLMRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDANLSPDLWAEAVGTANYLRNRCTTKALR-KVIPEEAWSGRKPNLAHLKVFGCLAMVHVASGQR-KKWDLKSEERIFVGYCETSKG-YRTVDCKTKKMYVTRDVKFLESRFPGTQASKEESTNSLMNPDVGEEAVIVWTSQDSGSTEMDPNPSVPPKVDTDSDESIGQSPQPSVKTSPEELRRPPRDRFPNRNIFNSDFLLFQAQVR--------EQSDSISYEEAVNRPDAKEWLKAINEELASHCENQSWEPAVLPPHKKAIKSKWVFKTKYKEDRTIEKRKARLVARGYSQLQGIDYEDTFAPTLGYSSLRYLLSLAAKYNLEVDQMDVVTAFLNPSLNE-EIYMELPTGVGDENNKYCRLRKSIYGLKQASRAWYGMLDDTLRSFGLNRLKNEPCIYFLWKNKIFLAVGVYVDDLLILSNNESSKNELKMALCE-----RFKMKDLGKAHWCLGIRIMQDVENGT--LSIDQEQYIEEL 759
BLAST of mRNA_H-akashiwo_Contig1183.10.1 vs. uniprot
Match: A0A0V1APU2_TRISP (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Trichinella spiralis TaxID=6334 RepID=A0A0V1APU2_TRISP) HSP 1 Score: 192 bits (488), Expect = 1.480e-48 Identity = 173/589 (29.37%), Postives = 269/589 (45.67%), Query Frame = 1
Query: 1 GYSCFMTLTDDATRYMVVYLLKKKKNEALAKYKAYCAGVWTRFGVSVKVYHGDNDPVTLGCKAFEAFLQQQGTEVSPTDVDAPKRNARAEISGRYVMEKARCLLIQANLPEACWPFAVPYAARLRNSTLHRALDPSTTPHEQWHGEEPDLGYLHVFGCFCAVTVVRQSRGSKMMSRAKPGLFVGLDGSMPPRYLVLDCQGAKVTTSTAVVFDDNVLPGLGAKSLWAAHENL----------VREMRDSGKLRGGSGVRLPLPRAWPKG---GRSPVAHSPTSARGGGKTAVEYRDARSYKKRDAVAVSHRVAAAAMAEAPSKHT-PQSYKEAMSGPDKKIWAHAIVQQLGKWQKRGIGTLVKRQPGMEVVRIRWVFQ--WKSDG---RAKARIAAKGFDQTLGVSYSESFSPTLKMTSLRLFFHLCVEHGLEIFSDDVVAAFISSSLGEDEVYLQVPEGFDCPEGYVLKLRCAVEGVKQSSAKWTTKVDRILDHQGFKAVDAEVCLYYKVTDGLLCLVARYVDDTL--SGVHPSQKWVYDALIEAIMAARLELHRLGNAVGQKFLSIQTNWKPGSRILVLDQKDYVRAL 1704
G F++ DD +R VY LK K NE L K+K + A V + VK DN + F FL ++G T + P++N AE R ++EKAR +LI ANL W AV A LRN +AL TP E W G +P+L +L VFGC V V R K +++ +FVG + Y +D + K+ + V F ++ PG A + + + V +DSG PL G++P + TS + R+ D + +V +H+ P SY+EA++ PD K W AI ++L ++ P + ++ +WVF+ +K DG + KAR+ AKG+ Q G+ + ++F+PTL +SLR L ++ LE+ DVV AF++ SL E E+Y+++P G +LR ++ G+KQ+S W +D L G + E C+Y+ + V YVDD L S S+ + AL E R ++ LG A + I + + G+ L +DQ+ Y+ +
Sbjct: 407 GARYFLSFIDDFSRKSFVYFLKHK-NEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVN-NMFAEFLVRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDANLSPDLWAEAVGTANYLRNRCPTKALR-KVTPEEAWSGRKPNLAHLKVFGCLAMVHVPSGQR-KKWDPKSEERIFVGYCETSKG-YRTVDRKTKKMYVTRDVKFLESQFPGTQASKEGSTNSLMNPDVGEEAVIVWTSQDSGSTEMDPNPTAPLKVDTDSDKSIGQNPQPSTKTSPEELRRPLRNRFPNRNIFNSDFLLFQAQV---------REHSDPISYEEAVNRPDAKEWLKAINEELASHRENQSWEPAVLPPHKKAIKSKWVFKTKYKEDGTIGKRKARLVAKGYSQLQGIDFEDTFAPTLGYSSLRYLLSLAAKYNLEVDQMDVVTAFLNPSLNE-EIYMELPSGVGDENNKYCRLRKSIYGLKQASRAWYGMLDETLRSFGLNRLKNEPCIYFLRKNKTFLAVGVYVDDLLILSNNESSKNELKMALCE-----RFKMKDLGKAHWCLGIRIVQDVENGT--LSIDQEQYIEEM 973
BLAST of mRNA_H-akashiwo_Contig1183.10.1 vs. uniprot
Match: A0A1Y1MYL8_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MYL8_PHOPY) HSP 1 Score: 192 bits (487), Expect = 2.060e-48 Identity = 152/584 (26.03%), Postives = 270/584 (46.23%), Query Frame = 1
Query: 1 GYSCFMTLTDDATRYMVVYLLKKKKNEALAKYKAYCAGVWTRFGVSVKVYHGDNDPVTLGCKAFEAFLQQQGTEVSPTDVDAPKRNARAEISGRYVMEKARCLLIQANLPEACWPFAVPYAARLRNSTLHRALDPSTTPHEQWHGEEPDLGYLHVFGCFCAVTVVRQSRGSKMMSRAKPGLFVGLDGSMPPRYLVLDCQGAKVTTSTAVVFDDNVLPGLGAKSLWAAHENLVREMRDSGKLRGGSGVRLPLPRAWPKGGRSPVAHSPTSARGGGKTAVEYRDARSYKKRDAVAVSHRVAAAAMAEAPSKH-----------TPQSYKEAMSGPDKKIWAHAIVQQLGKWQKRGIGTLVKRQPGMEVVRIRWVFQWK--SDG---RAKARIAAKGFDQTLGVSYSESFSPTLKMTSLRLFFHLCVEHGLEIFSDDVVAAFISSSLGEDEVYLQVPEGFDCPEGYVLKLRCAVEGVKQSSAKWTTKVDRILDHQGFKAVDAEVCLYYKVTDGLLCLVARYVDDTLSGVHPSQKWVYDALIEAIMAARLELHRLGNAVGQKFLSIQTNWKPGSRILVLDQKDYVRAL 1704
G + F DDAT Y VY++K K + L +K + +FG S+K H DN + F+ FLQ+ G E+ T P++N +AE R ++E AR +L + +LP W AV A + N T + TP++ W G++P L ++ FGC A T + + + +K+ ++K + VG DG+ Y + D + K+T S V+F ++ S+ N V+ + V H+ S G T + + + + + ++ + + + P K+ P +Y+EA+ + W +I ++L ++ G LV + G ++ +WVF+ K S G R KAR+ A+GF Q G+ Y E+FSPT + S+R + E E+ DV AF++ L E E+Y+ P G + V KL+ ++ G+KQ+S W K D L G + + + C+Y +G L+ +VDD L + K + +++ + +++ + + N F+ ++ + S+ + + Q++YV+ L
Sbjct: 496 GANYFALFKDDATSYRSVYVMKHKV-DILEHFKVFANLCKNKFGHSIKALHVDNGSEYINSN-FKDFLQKNGIEIERTAPYNPQQNGKAEREMRTIVESARSMLYEKDLPVEFWGDAVNTAVYILNRTPNSQTC-GKTPYQLWTGKQPHLNHIRTFGCE-AFTHIPKEKRTKLDRKSKKLMLVGYDGNST-NYRLFDTETRKITISRDVIFREDY-------SVPQGRVNTVKVV---------------------------VQHADESNDGDDSTPKVNEEVAAEEIAERQSCTYNLRSRGNIQPPVKYGDYEVNFVETDVPNTYEEALRSENSSEWKKSIAEELQAHEENGTWELVPKPVGKNIIDSKWVFKVKRTSQGEICRYKARLCARGFTQIRGLDYEETFSPTTRYDSIRTLLSIAAERDYEMVQFDVTTAFLNGDLVE-EIYMTPPTGANIDPTLVCKLKKSLYGLKQASRCWNKKFDDSLKKFGLQQCNGDKCVYKGEFNGAKVLLILFVDDGL--IIGENKSILSVILDKL---KVKFNIVINEPNY-FVGLEISRDRASKSICVSQRNYVKQL 1033
BLAST of mRNA_H-akashiwo_Contig1183.10.1 vs. uniprot
Match: A0A0V1APS7_TRISP (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=25 Tax=Trichinella TaxID=6333 RepID=A0A0V1APS7_TRISP) HSP 1 Score: 192 bits (487), Expect = 2.100e-48 Identity = 172/589 (29.20%), Postives = 270/589 (45.84%), Query Frame = 1
Query: 1 GYSCFMTLTDDATRYMVVYLLKKKKNEALAKYKAYCAGVWTRFGVSVKVYHGDNDPVTLGCKAFEAFLQQQGTEVSPTDVDAPKRNARAEISGRYVMEKARCLLIQANLPEACWPFAVPYAARLRNSTLHRALDPSTTPHEQWHGEEPDLGYLHVFGCFCAVTVVRQSRGSKMMSRAKPGLFVGLDGSMPPRYLVLDCQGAKVTTSTAVVFDDNVLPGLGAKSLWAAHENLVREM----------RDSGKLRGGSGVRLPLPRAWPKG---GRSPVAHSPTSARGGGKTAVEYRDARSYKKRDAVAVSHRVAAAAMAEAPSKHT-PQSYKEAMSGPDKKIWAHAIVQQLGKWQKRGIGTLVKRQPGMEVVRIRWVFQ--WKSDG---RAKARIAAKGFDQTLGVSYSESFSPTLKMTSLRLFFHLCVEHGLEIFSDDVVAAFISSSLGEDEVYLQVPEGFDCPEGYVLKLRCAVEGVKQSSAKWTTKVDRILDHQGFKAVDAEVCLYYKVTDGLLCLVARYVDDTL--SGVHPSQKWVYDALIEAIMAARLELHRLGNAVGQKFLSIQTNWKPGSRILVLDQKDYVRAL 1704
G F++ DD +R VY LK K NE L K+K + A V + VK DN + F FL ++G T + P++N AE R ++EKAR +LI ANL W AV A LRN +AL TP E W G +P+L +L VFGC V V R K +++ +FVG + Y +D + K+ + V F ++ PG A + + + ++ +DSG PL G++P + TS + R+ D + +V +H+ P SY+EA++ PD K W AI ++L ++ P + ++ +WVF+ +K DG + KAR+ AKG+ Q G+ + ++F+PTL +SLR L ++ LE+ DVV AF++ SL E E+Y+++P G +LR ++ G+KQ+S W +D L G + E C+Y+ + V YVDD L S S+ + AL E R ++ LG A + I + + G+ L +DQ+ Y+ +
Sbjct: 500 GARYFLSFIDDFSRKSFVYFLKHK-NEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVN-NMFAEFLVRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDANLSPDLWAEAVGTANYLRNRCPTKALR-KVTPEEAWSGRKPNLAHLKVFGCLAMVHVPSGQR-KKWDLKSEERIFVGYCETSKG-YRTVDRKTKKMYVTRDVKFLESQFPGTQASKEGSTNSLMSPDVGEEAVIVWTSQDSGSTEMDPNPTAPLKVDTDSDKSIGQNPQPSTKTSPEELRRPLRNRFPNRNIFNSDFLLFQAQV---------REHSDPISYEEAVNRPDAKEWLKAINEELASHRENQSWEPAVLPPHKKAIKSKWVFKTKYKEDGTIEKRKARLVAKGYSQLQGIDFEDTFAPTLGYSSLRYLLSLAAKYNLEVDQMDVVTAFLNPSLNE-EIYMELPSGVGDENNKYCRLRKSIYGLKQASRAWYGMLDETLRSFGLNRLKNEPCIYFLWKNKTFLAVGVYVDDLLILSNNESSKNELKMALCE-----RFKMKDLGKAHWCLGIRIVQDVENGT--LSIDQEQYIEEM 1066
BLAST of mRNA_H-akashiwo_Contig1183.10.1 vs. uniprot
Match: A0A1W7R6A5_AEDAL (Putative pol polyprotein (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6A5_AEDAL) HSP 1 Score: 191 bits (484), Expect = 3.700e-48 Identity = 163/607 (26.85%), Postives = 266/607 (43.82%), Query Frame = 1
Query: 1 GYSCFMTLTDDATRYMVVYLLKKKKNEALAKYKAYCAGVWTRFGVSVKVYHGDNDPVTLGCKAFEAFLQQQGTEVSPTDVDAPKRNARAEISGRYVMEKARCLLIQANLPEACWPFAVPYAARLRNSTLHRALDPSTTPHEQWHGEEPDLGYLHVFGCFCAVTVVRQSRGSKMMSRAKPGLFVGLDGSMPPRYLVLDCQGAKVTTST--------------------------------------AVVFDDNVLPGLGAKSLWAAHENLVREMRDSGKLRGGSGVRLPLPRAWPKGGRSPVAHSPTSARGGGKTAVEYRDARSYKKRDAVAVSHRVAAAAMAEAPSKHTPQSYKEAMSGPDKKIWAHAIVQQLGKWQKRGIGTLVKRQPGMEVVRIRWVFQWK--SDG---RAKARIAAKGFDQTLGVSYSESFSPTLKMTSLRLFFHLCVEHGLEIFSDDVVAAFISSSLGEDEVYLQVPEGFDCP--EGYVLKLRCAVEGVKQSSAKWTTKVDRILDHQGFKAVDAEVCLYYKVTDGLLCLVARYVDDTLSGVHPSQKWVYDALIEAIMAARLELHRLGNAVGQKFLSIQTNWKPGSRILVLDQK 1686
G F+T TDD +RY VVY++++K +E L K K + T+FG K+ D +G +L+ G T +P++N AE RY++E ARC+LI A L + W AV A ++N R++ TP+E+W G +PDL + FG V +Q RG K+ +A F+G Y ++D KVT S AV+ DD P W E + + + + PL + PV S + RG + R A A E P++Y E+ S K W +A++++L + +V PG + +WV++ K SDG R KAR+ A+GF+Q G Y E F+P +++T+ R + + G+ + DV +AF+ +L E+E++++ P GF EG V +L+ ++ G+KQ++ W ++ +L +GF+ D++ CLY K LC V YVDD + V K + D+L E + + LG+ +++L ++ G + Q+
Sbjct: 189 GRKYFLTFTDDYSRYTVVYIVRRK-SETLEKIKEFVEMAKTQFGRKPKILRSDRGGEYIG-NQVRNYLKSNGIVGQLTVPYSPQQNGVAERKNRYIVEMARCMLIDAKLDDRFWGEAVVTANHMQNRLPSRSIQ--GTPYERWFGRKPDLSDIRPFGIDVYCHVPKQKRG-KLDEKAVKLKFMGYSEDTKG-YRLVDVHTGKVTISRDVRFLNTFDPIKKSEENEVVVPLHVSHPRSHQVVPEDIAVILDDE--PDDDPDDFWVDTECFLDSNPNDDEP-----FQDPLNQXXXXXXXXPVRRSERATRG--------------------VLPQRYACVAEEET----EPRNYDESQSSIHKDQWRNAMLEELESIKSNDAWDIVDLPPGRRALGSKWVYKLKRDSDGNIRRFKARLVAQGFNQRYGSEYDEIFAPVVRLTTFRALLSVSAKRGMIVQQYDVKSAFLHGNL-EEEIFIRQPPGFVVKGAEGKVCRLKKSLYGLKQAARSWNNRLHEVLVGEGFERCDSDPCLYRKQVGDKLCFVLVYVDDLI--VSSDDKAIVDSL-EQSLKKNFAISCLGHV--RQYLGVEVGQDEGGDYYISQQR 752
BLAST of mRNA_H-akashiwo_Contig1183.10.1 vs. uniprot
Match: A0A0A9WQD4_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WQD4_LYGHE) HSP 1 Score: 190 bits (482), Expect = 9.320e-48 Identity = 174/606 (28.71%), Postives = 275/606 (45.38%), Query Frame = 1
Query: 1 GYSCFMTLTDDATRYMVVYLLKKKKNEALAKYKAYCAGVWTRFGVSVKVYHGDNDPVTLGCKAFEAFLQQQGTEVSPTDVDAPKRNARAEISGRYVMEKARCLLIQANLPEACWPFAVPYAARLRNSTLHRALDPSTTPHEQWHGEEPDLGYLHVFGCFCAVTVVRQSRGSKMMSRAKPGLFVGL-DGSMPPRYLVLDCQGAKVTTSTAVVFDDNVLPG-LGAKSLWAAHENLVREMRDSGKLR------GGSGVRLPLPRA-------------WPKGGRS---PVAHSPTSA--RGGGKTAVEYRDARSYKKRDAVAVSHRVAAAAMAEAPSKHTPQSYKEAMSGPDKKIWAHAIVQQLGKWQKRGIGTLVKRQPGMEVVRIRWVFQWKSDG-----RAKARIAAKGFDQTLGVSYSESFSPTLKMTSLRLFFHLCVEHGLEIFSDDVVAAFISSSLGEDEVYLQVPEGFDCPEGYVLK-------LRCAVEGVKQSSAKWTTKVDRILDHQGFKAVDAEVCLYYKVTDGLLCLVARYVDDTLSGVHPSQKWVYDALIEAIMAARLELHRLGNAVGQKFLSIQTNWKPGSRILVLDQKDYVRAL 1704
G F+T TDD TR VY LK K +EAL K+K + A V G ++ DN + KAF F G + + P++N +E R ++EKAR +++ A LP W AV A L+N + A++ + TP E W +PDL +L VFGC A +V +S+ SK ++K +F G D S Y ++D VT S V+FD+ + G AKS +L + D ++ G V P P+ W S + S S+ G + R +++ V +AA++ S P + EA+S PD + W AI+++ + LV V++ +WVF+ K DG R KAR+ KG Q G+ Y E+FSP +++T+LR+ L H + D V AF+ L DE+Y+ PE +G V++ L+ +V G+KQ+S W K D ++ G + C++Y+ + ++A YVDD + + I+ + A+LE+ LG A L + P + + +DQK Y+ ++
Sbjct: 476 GKRYFITFTDDKTRKTSVYFLKHK-DEALTKFKEFKARVENETGKRIRFLRSDNGKEFVN-KAFSDFCSVNGIQHQKSIDYCPQQNGVSERVNRTLVEKARSMMLDAKLPAKYWAEAVNAACFLKNVSPTIAVN-NMTPFEAWSNRKPDLSHLKVFGC-TAYALVPKSKRSKWDPKSKEYVFTGYCDDSKG--YRLIDPSTGCVTKSRDVIFDETLFKGDTKAKS---NEPDLTQFFEDFSEMGLEDFGVSGQPVLPPTPQTTEPDXXXXXXXXEWHPAEDSFQEDLFSSDDSSDFHGFPDADLTERQLPERERKLPKRFEDYVMSAALS-IESSEDPTTLDEALSQPDSENWKMAIMEEYDSLLRNKSWELVDHPKDHNVIKCKWVFRKKHDGNSDKVRYKARLVVKGCSQIYGIDYDETFSPVVRITTLRILLALAASHSWMVEQMDAVTAFLQPDL-HDEIYMYHPEIIK--DGKVIREFDRVCRLKKSVYGLKQASRLWYQKFDTVMTELGLTKAQFDPCVFYRFDGDCIFILALYVDDAMIFTNNDD---LKTKIKGDLMAKLEMKDLGPA--SYCLGMHIERDPITGTICVDQKRYIESV 1063
BLAST of mRNA_H-akashiwo_Contig1183.10.1 vs. uniprot
Match: A0A0V0T3I0_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trichinella TaxID=6333 RepID=A0A0V0T3I0_9BILA) HSP 1 Score: 189 bits (481), Expect = 1.010e-47 Identity = 156/520 (30.00%), Postives = 245/520 (47.12%), Query Frame = 1
Query: 1 GYSCFMTLTDDATRYMVVYLLKKKKNEALAKYKAYCAGVWTRFGVSVKVYHGDNDPVTLGCKAFEAFLQQQGTEVSPTDVDAPKRNARAEISGRYVMEKARCLLIQANLPEACWPFAVPYAARLRNSTLHRALDPSTTPHEQWHGEEPDLGYLHVFGCFCAVTVVRQSRGSKMMSRAKPGLFVGLDGSMPPRYLVLDCQGAKVTTSTAVVFDDNVLPGLGAKSLWAAHENLVREMRDSGKL-----RGGSGVRLPLPRAWPKGGRSPVAHSPTSARGGGKTAVEY--RDARS-YKKRDAVAVSHRVAAAAMAEAPSKHTPQSYKEAMSGPDKKIWAHAIVQQLGKWQKRGIGTLVKRQPGMEVVRIRWVFQ--WKSDG---RAKARIAAKGFDQTLGVSYSESFSPTLKMTSLRLFFHLCVEHGLEIFSDDVVAAFISSSLGEDEVYLQVPEGFDCPEGYVLKLRCAVEGVKQSSAKWTTKVDRILDHQGFKAVDAEVCLYYKVTDGLLCLVARYVDDTL 1521
G F++ DD +R VY LK K NEAL K+K + A V + VK DN + F FL ++G T + P++N AE R ++EKAR +LI ANL W AV A LRN +AL TP E W G +P+L +L +FGC V V R K +++ +FVG + Y +D + K+ + V F ++ PG + + + + ++ + + GS P P PK + S + KT+ E R R+ + R+ + + E + P SY+EA++ PD K W AI ++L + P + ++ +WVF+ +K DG + KAR+ A+G+ Q G+ Y ++F+PTL +SLR L ++ LE+ DVV AF++ +L E E+Y+++P G +LR ++ G+KQ+S W +D L G + E C+Y+ + V YVDD L
Sbjct: 500 GARYFLSFIDDFSRKSFVYFLKHK-NEALPKFKDFIAMVERQTSKRVKCLRTDNGREYVN-NMFAEFLMRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDANLSPDLWAEAVGTANYLRNRCPTKALR-KVTPEEAWSGRKPNLAHLKIFGCLAMVHVASGQR-KKWDPKSEERIFVGYCETSKG-YRTVDRKTKKMYVTRDVKFLESRFPGTQSSKEESTNSLMNPDVGEEAVIVWTSQDTGSTEMDPNPSVPPKVDTDSNESTGQSPQPSVKTSPEELRRPLRNRFPNRNIFNADFLLFQTQVRE---QSDPISYEEALNRPDAKEWLKAINEELASHHENQSWEPAVLPPHKKAIKSKWVFKTKYKEDGTIEKRKARLVARGYSQRQGIDYEDTFAPTLGYSSLRYLLSLAAKYNLEVDQMDVVTAFLNPNLNE-EIYMELPTGVYDENNKYCRLRKSIYGLKQASRAWYGMLDDTLRSFGLNRLKNEPCIYFLRKNETFLAVGVYVDDLL 1010 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1183.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1183.10.1 >prot_H-akashiwo_Contig1183.10.1 ID=prot_H-akashiwo_Contig1183.10.1|Name=mRNA_H-akashiwo_Contig1183.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=564bp MTLTDDATRYMVVYLLKKKKNEALAKYKAYCAGVWTRFGVSVKVYHGDNDback to top mRNA from alignment at H-akashiwo_Contig1183:216268..217974- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1183.10.1 ID=mRNA_H-akashiwo_Contig1183.10.1|Name=mRNA_H-akashiwo_Contig1183.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1707bp|location=Sequence derived from alignment at H-akashiwo_Contig1183:216268..217974- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1183:216268..217974- >mRNA_H-akashiwo_Contig1183.10.1 ID=mRNA_H-akashiwo_Contig1183.10.1|Name=mRNA_H-akashiwo_Contig1183.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1692bp|location=Sequence derived from alignment at H-akashiwo_Contig1183:216268..217974- (Heterosigma akashiwo CCMP452)back to top |