mRNA_H-akashiwo_Contig1180.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1180.2.1
Unique NamemRNA_H-akashiwo_Contig1180.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1180.2.1 vs. uniprot
Match: A0A7S2DBE6_9STRA (Tubulin beta chain n=6 Tax=Sar TaxID=2698737 RepID=A0A7S2DBE6_9STRA)

HSP 1 Score: 881 bits (2277), Expect = 0.000e+0
Identity = 423/440 (96.14%), Postives = 436/440 (99.09%), Query Frame = 1
Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKVREEYPDRIMSTYSVVPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAIAGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMATTFVGNSTAVQEMWKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEE 1320
            MRE+VH+QAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISK+REEYPDR+M+TYSV+PSPKVSDTVVEPYNATLSVHQLVENADQCF LDNEALYDICFRTLKLTTPTYGDLNHLVSAAI GTTC LRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNV+NKNSSYFVEWIPNNVK+SICDIPPKGLKM+TTFVGNSTAVQE WKRV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDE+E
Sbjct:    9 MREVVHIQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKIREEYPDRVMTTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFALDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCGLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVINKNSSYFVEWIPNNVKSSICDIPPKGLKMSTTFVGNSTAVQETWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDE 448          
BLAST of mRNA_H-akashiwo_Contig1180.2.1 vs. uniprot
Match: TBB5_ECTVR (Tubulin beta-5 chain n=44 Tax=Eukaryota TaxID=2759 RepID=TBB5_ECTVR)

HSP 1 Score: 877 bits (2265), Expect = 0.000e+0
Identity = 424/447 (94.85%), Postives = 440/447 (98.43%), Query Frame = 1
Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKVREEYPDRIMSTYSVVPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAIAGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMATTFVGNSTAVQEMWKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEEFDDMMG 1341
            MREIVHVQAGQCGNQIG+KFWEVISDEHG+DPTG+YHGDSDLQLERIN Y+NEATGGRYVPRAILMDLEPGTMDSVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCD LQGFQLTHSMGGGTG+GMGTLLISKVREEYPDR+MSTYSV+PSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAI GTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FD+KNMMCAADPRHGRYLTCA MFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKM+TTFVGN+TA+QE+WKRV+EQFT+MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDE+EE DD MG
Sbjct:    1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLERINCYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDALQGFQLTHSMGGGTGAGMGTLLISKVREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAICGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQCFDSKNMMCAADPRHGRYLTCAVMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMSTTFVGNTTAIQEVWKRVAEQFTSMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEELDDAMG 447          
BLAST of mRNA_H-akashiwo_Contig1180.2.1 vs. uniprot
Match: TBB_TETTH (Tubulin beta chain n=61 Tax=Alveolata TaxID=33630 RepID=TBB_TETTH)

HSP 1 Score: 847 bits (2187), Expect = 1.710e-309
Identity = 407/440 (92.50%), Postives = 427/440 (97.05%), Query Frame = 1
Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKVREEYPDRIMSTYSVVPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAIAGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMATTFVGNSTAVQEMWKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEE 1320
            MREIVH+Q GQCGNQIGAKFWEVISDEHG+DPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+THS+GGGTGSGMGTLLISKVREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENAD+C  +DNEALYDICFRTLKLTTPTYGDLNHLVSAA++G TC LRFPGQLN DLRKLAVN++PFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQ FDAKNMMCAADPRHGRYLT + +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+K+SICDIPPKGLKMA TFVGNSTA+QEM+KRV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEF+EEE
Sbjct:    1 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSLGGGTGSGMGTLLISKVREEYPDRIMETFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVIDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEE 440          
BLAST of mRNA_H-akashiwo_Contig1180.2.1 vs. uniprot
Match: L1IEU9_GUITC (Tubulin beta chain n=18 Tax=Eukaryota TaxID=2759 RepID=L1IEU9_GUITC)

HSP 1 Score: 845 bits (2183), Expect = 7.520e-309
Identity = 404/441 (91.61%), Postives = 428/441 (97.05%), Query Frame = 1
Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKVREEYPDRIMSTYSVVPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAIAGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMATTFVGNSTAVQEMWKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEE 1323
            MREIVH+Q GQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVY+NEATGGRYVPRA+LMDLEPGTMDSVRAGPYGQ+FRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQ++HS+GGGTG+GMGTLLISK+REEYPDRIM T+S+VPSPKVSDTVVEPYNATLSVHQLVENAD+CF +DNEALYDICFRTLKLTTPT+GDLNHLVSA ++G TCSLRFPGQLN DLRKLAVN+VPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQ FDAKNMMCAADPRHGRYLT A MFRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+KAS+CDIPPKGLKMA  F+GNSTA+QEM+KRVSEQFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEF+EEEE
Sbjct:    1 MREIVHIQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAVLMDLEPGTMDSVRAGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQISHSLGGGTGAGMGTLLISKIREEYPDRIMLTFSIVPSPKVSDTVVEPYNATLSVHQLVENADECFCIDNEALYDICFRTLKLTTPTFGDLNHLVSAVMSGVTCSLRFPGQLNSDLRKLAVNIVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTAAAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMAVNFIGNSTAIQEMFKRVSEQFTGMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFEEEEE 441          
BLAST of mRNA_H-akashiwo_Contig1180.2.1 vs. uniprot
Match: F0Y8A1_AURAN (Uncharacterized protein n=4 Tax=Sar TaxID=2698737 RepID=F0Y8A1_AURAN)

HSP 1 Score: 851 bits (2199), Expect = 7.720e-307
Identity = 401/424 (94.58%), Postives = 421/424 (99.29%), Query Frame = 1
Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKVREEYPDRIMSTYSVVPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAIAGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMATTFVGNSTAVQEMWKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 1272
            MREIVH+Q GQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTG+GMGTLLISK+REEYPDR+MSTYSV+PSPKVSDTVVEPYNATLSVHQLVEN+DQCFTLDNEALYDICFRTLKLTTPTYGDLNHL++AA+ GTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFM+GFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTC+C+FRGRMSTKEVDEQMLNV+NKNSSYFVEWIPNNVK++ICDIPPKGLKM+TTF+GNSTA+QE WKRV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ
Sbjct:    1 MREIVHIQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGAGMGTLLISKIREEYPDRVMSTYSVIPSPKVSDTVVEPYNATLSVHQLVENSDQCFTLDNEALYDICFRTLKLTTPTYGDLNHLIAAALCGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCSCLFRGRMSTKEVDEQMLNVINKNSSYFVEWIPNNVKSAICDIPPKGLKMSTTFIGNSTAIQETWKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424          
BLAST of mRNA_H-akashiwo_Contig1180.2.1 vs. uniprot
Match: G9I115_9CHLO (Tubulin beta chain n=1 Tax=Ulva linza TaxID=63409 RepID=G9I115_9CHLO)

HSP 1 Score: 833 bits (2152), Expect = 3.690e-304
Identity = 402/441 (91.16%), Postives = 424/441 (96.15%), Query Frame = 1
Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKVREEYPDRIMSTYSVVPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAIAGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMATTFVGNSTAVQEMWKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEE 1323
            MREIVH+Q GQCGNQIGAKFWEV+ DEHG+D TGTY GDSDLQLERINVY+NEATGGRYVPRAILMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQL HSMGGGTGSGMGTLLISK+REEYPDR+M T+SVVPSPKVSDTVVEPYNATLSVHQLVE+AD+C  LDNEALYDICFRTLKLTTPT+GDLNHL+SA ++G TCSLRFPGQLN DLRKLAVN+VPFPRLHFFMIGF PLTSRGSQQYRALTVPELTQQ +DAKNMMCAADPRHGRYLT A +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNNVKAS+CDIPPKGLKM+ TFVGNSTAVQEM+KRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+AEEEGEFDEEEE
Sbjct:    1 MREIVHIQGGQCGNQIGAKFWEVVCDEHGIDSTGTYQGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLAHSMGGGTGSGMGTLLISKIREEYPDRMMVTFSVVPSPKVSDTVVEPYNATLSVHQLVESADECLILDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGVTCSLRFPGQLNSDLRKLAVNLVPFPRLHFFMIGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTAAALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKASVCDIPPKGLKMSATFVGNSTAVQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASAEEEGEFDEEEE 441          
BLAST of mRNA_H-akashiwo_Contig1180.2.1 vs. uniprot
Match: TBB_ACHKL (Tubulin beta chain n=13 Tax=Oomycota TaxID=4762 RepID=TBB_ACHKL)

HSP 1 Score: 833 bits (2152), Expect = 3.840e-304
Identity = 408/446 (91.48%), Postives = 427/446 (95.74%), Query Frame = 1
Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKVREEYPDRIMSTYSVVPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAIAGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMATTFVGNSTAVQEMWKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEEFDDMM 1338
            MRE+VH+Q GQCGNQIGAKFWEVISDEHGVDPTG+YHGDSDLQLERINVYYNEATG  YVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQ+THS+GGGTGSGMGTLLISK+REEYPDRIM TYSV PSPKVSDTVVEPYNATLSVHQLVENAD+   LDNEALYDICFRTLKLT PTYGDLNHLV AA++G T  LRFPGQLN  L KLAVN++PFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLT ACMFRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+KAS+CDIPPKGLKM+TTF+GNSTA+QEM+KRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDE+EE D+MM
Sbjct:    1 MRELVHIQGGQCGNQIGAKFWEVISDEHGVDPTGSYHGDSDLQLERINVYYNEATG-TYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQITHSLGGGTGSGMGTLLISKIREEYPDRIMCTYSVCPSPKVSDTVVEPYNATLSVHQLVENADEVMCLDNEALYDICFRTLKLTNPTYGDLNHLVCAAMSGITTLLRFPGQLNSVL-KLAVNLIPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMSTTFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEDEEMDEMM 444          
BLAST of mRNA_H-akashiwo_Contig1180.2.1 vs. uniprot
Match: A0A813LVE5_POLGL (Tubulin beta chain n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LVE5_POLGL)

HSP 1 Score: 840 bits (2169), Expect = 4.190e-304
Identity = 401/440 (91.14%), Postives = 423/440 (96.14%), Query Frame = 1
Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKVREEYPDRIMSTYSVVPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAIAGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMATTFVGNSTAVQEMWKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEE 1320
            MRE+VH+QAGQCGNQIGAKFWEVISDEHG+DPTGTYHGDSDLQLERINVY+NEATGGRYVPRAILMDLEPGTMDSVRAGP+GQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+ HS+GGGTGSGMGTLLISKVREEYPDR+M T+SV+PSPKVSDTVVEPYNA LS HQLVEN+D+CF LDNEALYDICFRTLKLTTPTYGDLNHLVSAA++G TC LRFPGQLNCDLRK+AVN+VPFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQ FDAKNMMCAADPRHGRYLT A +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+KAS+CDIPPKGLKMA  F GNSTA+QEM+KRV+E FTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEE
Sbjct:  162 MRELVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRAGPFGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQMCHSLGGGTGSGMGTLLISKVREEYPDRVMETFSVIPSPKVSDTVVEPYNAVLSFHQLVENSDECFLLDNEALYDICFRTLKLTTPTYGDLNHLVSAAMSGVTCCLRFPGQLNCDLRKIAVNLVPFPRLHFFMTGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTAAALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMAVAFAGNSTAIQEMFKRVAEYFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEE 601          
BLAST of mRNA_H-akashiwo_Contig1180.2.1 vs. uniprot
Match: TBB1_CYAPA (Tubulin beta-1 chain n=29 Tax=Eukaryota TaxID=2759 RepID=TBB1_CYAPA)

HSP 1 Score: 833 bits (2151), Expect = 6.100e-304
Identity = 399/435 (91.72%), Postives = 418/435 (96.09%), Query Frame = 1
Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKVREEYPDRIMSTYSVVPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAIAGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMATTFVGNSTAVQEMWKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGE 1305
            MREIVHVQ GQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRA+LMDLEPGTMDSVRAGPYGQLFRPDNF+FGQ+GAGNNWAKGHYTEGAELIDSVLDVVRKEAE CDCLQGFQ+THSMGGGTGSGMGTLLI+KVREEYPDR+M TYSV PSPKVSDTVVEPYNATLSVHQLVENAD+   +DNEALYDICFRTLKLTTPTYGDLNHLVSA I+G TC LRFPGQLN DLRKLAVN++PFPRLHFFMIGF PLTSRGSQQYRALTVPELTQQ FDAKNMMCAADPRHGRYLT + +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNN+KAS+CDIPPKGLKM+ TF+GNSTA+QEM+KRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGE
Sbjct:    1 MREIVHVQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRAGPYGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAEGCDCLQGFQITHSMGGGTGSGMGTLLIAKVREEYPDRMMCTYSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVIDNEALYDICFRTLKLTTPTYGDLNHLVSACISGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMIGFVPLTSRGSQQYRALTVPELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGE 435          
BLAST of mRNA_H-akashiwo_Contig1180.2.1 vs. uniprot
Match: TBB_CHLRE (Tubulin beta-1/beta-2 chain n=81 Tax=Eukaryota TaxID=2759 RepID=TBB_CHLRE)

HSP 1 Score: 831 bits (2146), Expect = 3.030e-303
Identity = 395/441 (89.57%), Postives = 425/441 (96.37%), Query Frame = 1
Query:    1 MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYYNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTLLISKVREEYPDRIMSTYSVVPSPKVSDTVVEPYNATLSVHQLVENADQCFTLDNEALYDICFRTLKLTTPTYGDLNHLVSAAIAGTTCSLRFPGQLNCDLRKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMMCAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVKASICDIPPKGLKMATTFVGNSTAVQEMWKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEE 1323
            MREIVH+Q GQCGNQIGAKFWEV+SDEHG+DPTGTYHGDSDLQLERINVY+NEATGGRYVPRAILMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQ+ HS+GGGTGSGMGTLLISK+REEYPDR+M T+SVVPSPKVSDTVVEPYNATLSVHQLVENAD+C  LDNEALYDICFRTLKLTTPT+GDLNHL+SA ++G TC LRFPGQLN DLRKLAVN++PFPRLHFFM+GF PLTSRGSQQYRALTVPELTQQ +DAKNMMCAADPRHGRYLT + +FRGRMSTKEVDEQMLNV NKNSSYFVEWIPNNVK+S+CDIPPKGLKM+ TF+GNSTA+QEM+KRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+AEEEGEF+ EEE
Sbjct:    1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQLERINVYFNEATGGRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGITCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASAEEEGEFEGEEE 441          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1180.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2DBE6_9STRA0.000e+096.14Tubulin beta chain n=6 Tax=Sar TaxID=2698737 RepID... [more]
TBB5_ECTVR0.000e+094.85Tubulin beta-5 chain n=44 Tax=Eukaryota TaxID=2759... [more]
TBB_TETTH1.710e-30992.50Tubulin beta chain n=61 Tax=Alveolata TaxID=33630 ... [more]
L1IEU9_GUITC7.520e-30991.61Tubulin beta chain n=18 Tax=Eukaryota TaxID=2759 R... [more]
F0Y8A1_AURAN7.720e-30794.58Uncharacterized protein n=4 Tax=Sar TaxID=2698737 ... [more]
G9I115_9CHLO3.690e-30491.16Tubulin beta chain n=1 Tax=Ulva linza TaxID=63409 ... [more]
TBB_ACHKL3.840e-30491.48Tubulin beta chain n=13 Tax=Oomycota TaxID=4762 Re... [more]
A0A813LVE5_POLGL4.190e-30491.14Tubulin beta chain n=3 Tax=Polarella glacialis Tax... [more]
TBB1_CYAPA6.100e-30491.72Tubulin beta-1 chain n=29 Tax=Eukaryota TaxID=2759... [more]
TBB_CHLRE3.030e-30389.57Tubulin beta-1/beta-2 chain n=81 Tax=Eukaryota Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1180contigH-akashiwo_Contig1180:155950..157293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009035452.1
PFAMsTubulin,Tubulin_C
Model size1344
Max annot lvl2759|Eukaryota
KEGG koko:K07375
KEGG Pathwayko04145,ko04540,ko05130,map04145,map04540,map05130
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464
Exons1
Evalue0.0
EggNOG OGsCOG5023@1|root,KOG1375@2759|Eukaryota
Descriptionstructural constituent of cytoskeleton
Cds size1344
COG categoryZ
BRITEko00000,ko00001,ko03036,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387109.3111694-CDS-H-akashiwo_Contig1180:155949..1572931681387109.3111694-CDS-H-akashiwo_Contig1180:155949..157293Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1180 155950..157293 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1180.2.1prot_H-akashiwo_Contig1180.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1180 155950..157293 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1180.2.1

>prot_H-akashiwo_Contig1180.2.1 ID=prot_H-akashiwo_Contig1180.2.1|Name=mRNA_H-akashiwo_Contig1180.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=448bp
MREIVHVQAGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVY
YNEATGGRYVPRAILMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNN
WAKGHYTEGAELIDSVLDVVRKEAESCDCLQGFQLTHSMGGGTGSGMGTL
LISKVREEYPDRIMSTYSVVPSPKVSDTVVEPYNATLSVHQLVENADQCF
TLDNEALYDICFRTLKLTTPTYGDLNHLVSAAIAGTTCSLRFPGQLNCDL
RKLAVNMVPFPRLHFFMIGFAPLTSRGSQQYRALTVPELTQQQFDAKNMM
CAADPRHGRYLTCACMFRGRMSTKEVDEQMLNVVNKNSSYFVEWIPNNVK
ASICDIPPKGLKMATTFVGNSTAVQEMWKRVSEQFTAMFRRKAFLHWYTG
EGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEFDEEEEFDDMMG*
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mRNA from alignment at H-akashiwo_Contig1180:155950..157293-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1180.2.1 ID=mRNA_H-akashiwo_Contig1180.2.1|Name=mRNA_H-akashiwo_Contig1180.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1344bp|location=Sequence derived from alignment at H-akashiwo_Contig1180:155950..157293- (Heterosigma akashiwo CCMP452)
ATGAGAGAAATCGTCCACGTTCAGGCAGGCCAGTGCGGTAACCAGATTGG CGCCAAGTTCTGGGAGGTCATATCCGATGAGCACGGCGTTGATCCCACTG GTACCTATCATGGTGACTCCGATCTGCAGCTAGAACGCATCAATGTGTAC TACAATGAGGCAACTGGTGGGCGGTACGTGCCAAGAGCCATCCTGATGGA TCTTGAGCCTGGTACCATGGACTCTGTCCGTGCTGGCCCTTACGGCCAGC TCTTCAGACCCGACAACTTCGTTTTTGGCCAGACTGGTGCTGGTAATAAC TGGGCTAAGGGCCACTACACTGAGGGTGCCGAGCTGATCGACTCCGTGCT TGATGTCGTGAGAAAGGAGGCTGAGTCTTGCGATTGCCTCCAAGGATTTC AACTGACGCACTCCATGGGTGGTGGTACCGGCTCTGGTATGGGTACCCTT CTGATTTCGAAGGTCCGTGAGGAATACCCTGACAGAATCATGTCAACTTA TTCTGTTGTGCCTTCCCCCAAGGTTTCTGACACTGTCGTGGAGCCATATA ACGCCACTCTTTCTGTGCACCAGCTTGTTGAGAATGCCGACCAGTGCTTC ACCCTTGATAACGAGGCCCTCTACGATATCTGCTTCAGAACGCTGAAGCT CACCACCCCTACCTATGGTGACCTTAACCACCTTGTGTCTGCTGCTATCG CTGGTACCACTTGCTCTCTTCGTTTCCCTGGTCAGCTCAACTGTGATCTC CGCAAGCTTGCTGTGAATATGGTCCCCTTCCCTCGTCTCCACTTCTTCAT GATTGGTTTTGCCCCCCTCACTTCCAGAGGGTCCCAGCAGTACCGTGCTC TGACCGTCCCTGAGCTCACTCAGCAGCAGTTTGATGCCAAGAATATGATG TGTGCCGCTGATCCTCGCCACGGCCGGTATCTGACCTGTGCGTGCATGTT CCGTGGCCGCATGTCCACCAAGGAGGTTGACGAGCAGATGCTCAATGTTG TGAACAAGAACTCCTCCTACTTCGTGGAGTGGATCCCCAACAACGTGAAG GCTTCTATCTGTGATATCCCTCCCAAGGGTCTGAAGATGGCCACCACTTT TGTGGGCAACTCCACCGCTGTCCAAGAGATGTGGAAGCGTGTGTCTGAGC AGTTCACAGCCATGTTCCGCAGAAAGGCGTTCCTTCACTGGTACACTGGT GAGGGTATGGATGAGATGGAATTTACTGAGGCTGAGTCCAACATGAACGA TCTTGTGTCTGAGTACCAGCAGTACCAGGATGCCACTGCTGAGGAGGAGG GCGAGTTTGATGAGGAGGAGGAGTTTGATGACATGATGGGTTAA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1180:155950..157293-

>mRNA_H-akashiwo_Contig1180.2.1 ID=mRNA_H-akashiwo_Contig1180.2.1|Name=mRNA_H-akashiwo_Contig1180.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1344bp|location=Sequence derived from alignment at H-akashiwo_Contig1180:155950..157293- (Heterosigma akashiwo CCMP452)
ATGAGAGAAATCGTCCACGTTCAGGCAGGCCAGTGCGGTAACCAGATTGG
CGCCAAGTTCTGGGAGGTCATATCCGATGAGCACGGCGTTGATCCCACTG
GTACCTATCATGGTGACTCCGATCTGCAGCTAGAACGCATCAATGTGTAC
TACAATGAGGCAACTGGTGGGCGGTACGTGCCAAGAGCCATCCTGATGGA
TCTTGAGCCTGGTACCATGGACTCTGTCCGTGCTGGCCCTTACGGCCAGC
TCTTCAGACCCGACAACTTCGTTTTTGGCCAGACTGGTGCTGGTAATAAC
TGGGCTAAGGGCCACTACACTGAGGGTGCCGAGCTGATCGACTCCGTGCT
TGATGTCGTGAGAAAGGAGGCTGAGTCTTGCGATTGCCTCCAAGGATTTC
AACTGACGCACTCCATGGGTGGTGGTACCGGCTCTGGTATGGGTACCCTT
CTGATTTCGAAGGTCCGTGAGGAATACCCTGACAGAATCATGTCAACTTA
TTCTGTTGTGCCTTCCCCCAAGGTTTCTGACACTGTCGTGGAGCCATATA
ACGCCACTCTTTCTGTGCACCAGCTTGTTGAGAATGCCGACCAGTGCTTC
ACCCTTGATAACGAGGCCCTCTACGATATCTGCTTCAGAACGCTGAAGCT
CACCACCCCTACCTATGGTGACCTTAACCACCTTGTGTCTGCTGCTATCG
CTGGTACCACTTGCTCTCTTCGTTTCCCTGGTCAGCTCAACTGTGATCTC
CGCAAGCTTGCTGTGAATATGGTCCCCTTCCCTCGTCTCCACTTCTTCAT
GATTGGTTTTGCCCCCCTCACTTCCAGAGGGTCCCAGCAGTACCGTGCTC
TGACCGTCCCTGAGCTCACTCAGCAGCAGTTTGATGCCAAGAATATGATG
TGTGCCGCTGATCCTCGCCACGGCCGGTATCTGACCTGTGCGTGCATGTT
CCGTGGCCGCATGTCCACCAAGGAGGTTGACGAGCAGATGCTCAATGTTG
TGAACAAGAACTCCTCCTACTTCGTGGAGTGGATCCCCAACAACGTGAAG
GCTTCTATCTGTGATATCCCTCCCAAGGGTCTGAAGATGGCCACCACTTT
TGTGGGCAACTCCACCGCTGTCCAAGAGATGTGGAAGCGTGTGTCTGAGC
AGTTCACAGCCATGTTCCGCAGAAAGGCGTTCCTTCACTGGTACACTGGT
GAGGGTATGGATGAGATGGAATTTACTGAGGCTGAGTCCAACATGAACGA
TCTTGTGTCTGAGTACCAGCAGTACCAGGATGCCACTGCTGAGGAGGAGG
GCGAGTTTGATGAGGAGGAGGAGTTTGATGACATGATGGGTTAA
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