mRNA_H-akashiwo_Contig118.18.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig118.18.1
Unique NamemRNA_H-akashiwo_Contig118.18.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig118.18.1 vs. uniprot
Match: A0A841HQ80_9GAMM (Proline iminopeptidase n=1 Tax=Povalibacter uvarum TaxID=732238 RepID=A0A841HQ80_9GAMM)

HSP 1 Score: 55.5 bits (132), Expect = 3.460e-7
Identity = 24/34 (70.59%), Postives = 26/34 (76.47%), Query Frame = 1 
Query:  124 ANRLDLYPLPEPYRTGMLRVSSIHEIYYEESGNP 225
            A R  LYP  EPY+TG LRVS +HEIYYEE GNP
Sbjct:   40 AGRRGLYPAIEPYKTGYLRVSDVHEIYYEECGNP 73
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BLAST of mRNA_H-akashiwo_Contig118.18.1 vs. uniprot
Match: A0A1D1VVC5_RAMVA (Prolyl aminopeptidase n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VVC5_RAMVA)

HSP 1 Score: 53.1 bits (126), Expect = 5.860e-7
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 1 
Query:  136 DLYPLPEPYRTGMLRVSSIHEIYYEESGNP 225
            DLYP  EPY++G LRVS +HEIYYE+SGNP
Sbjct:   63 DLYPEIEPYQSGFLRVSDLHEIYYEQSGNP 92
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BLAST of mRNA_H-akashiwo_Contig118.18.1 vs. uniprot
Match: A0A355C3X0_9PROT (Proline iminopeptidase n=2 Tax=Parvularcula sp. TaxID=1979207 RepID=A0A355C3X0_9PROT)

HSP 1 Score: 54.7 bits (130), Expect = 6.220e-7
Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 1 
Query:  124 ANRLDLYPLPEPYRTGMLRVSSIHEIYYEESGNP 225
            A R DLYP+ EPY TG L+VS +HEIYYE  GNP
Sbjct:    2 AERFDLYPVLEPYETGRLKVSDLHEIYYEVCGNP 35
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BLAST of mRNA_H-akashiwo_Contig118.18.1 vs. uniprot
Match: A0A813YL08_9BILA (Prolyl aminopeptidase n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A813YL08_9BILA)

HSP 1 Score: 51.2 bits (121), Expect = 7.120e-7
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 1 
Query:  136 DLYPLPEPYRTGMLRVSSIHEIYYEESGNP 225
            DLYP  +PY+TGML+VS IH +YYEE GNP
Sbjct:   16 DLYPEIQPYKTGMLKVSDIHTLYYEEVGNP 45
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BLAST of mRNA_H-akashiwo_Contig118.18.1 vs. uniprot
Match: A0A813W5Z2_9BILA (Prolyl aminopeptidase n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A813W5Z2_9BILA)

HSP 1 Score: 51.2 bits (121), Expect = 7.630e-7
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 1 
Query:  136 DLYPLPEPYRTGMLRVSSIHEIYYEESGNP 225
            DLYP  +PY+TGML+VS IH +YYEE GNP
Sbjct:   16 DLYPEIQPYKTGMLKVSDIHTLYYEEVGNP 45
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BLAST of mRNA_H-akashiwo_Contig118.18.1 vs. uniprot
Match: A0A452ZJL7_AEGTS (Prolyl aminopeptidase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452ZJL7_AEGTS)

HSP 1 Score: 52.4 bits (124), Expect = 1.010e-6
Identity = 23/34 (67.65%), Postives = 26/34 (76.47%), Query Frame = 1 
Query:  124 ANRLDLYPLPEPYRTGMLRVSSIHEIYYEESGNP 225
            A R DLYP  EP+ TG LRVS +H IYYE+SGNP
Sbjct:    4 AARKDLYPHVEPFDTGRLRVSDVHTIYYEQSGNP 37
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BLAST of mRNA_H-akashiwo_Contig118.18.1 vs. uniprot
Match: A0A6G6WVA5_9HYPH (Proline iminopeptidase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6G6WVA5_9HYPH)

HSP 1 Score: 53.9 bits (128), Expect = 1.170e-6
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 1 
Query:  124 ANRLDLYPLPEPYRTGMLRVSSIHEIYYEESGNP 225
            A+RL LYP  EPYRTG L+VS++HEIYYEE GNP
Sbjct:    3 AHRL-LYPETEPYRTGRLKVSALHEIYYEECGNP 35
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BLAST of mRNA_H-akashiwo_Contig118.18.1 vs. uniprot
Match: F2BE55_9NEIS (Proline iminopeptidase n=4 Tax=Neisseria TaxID=482 RepID=F2BE55_9NEIS)

HSP 1 Score: 53.9 bits (128), Expect = 1.200e-6
Identity = 23/41 (56.10%), Postives = 34/41 (82.93%), Query Frame = 1 
Query:  103 KESPENKANRLDLYPLPEPYRTGMLRVSSIHEIYYEESGNP 225
            K+SP+ +   L +YP+ EP R+GML+VS++H+IY+EESGNP
Sbjct:   20 KQSPQTRKETL-MYPIEEPLRSGMLQVSALHQIYWEESGNP 59
[Close]
BLAST of mRNA_H-akashiwo_Contig118.18.1 vs. uniprot
Match: A0A1D1VU11_RAMVA (Proline iminopeptidase n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1VU11_RAMVA)

HSP 1 Score: 53.1 bits (126), Expect = 1.360e-6
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 1 
Query:  136 DLYPLPEPYRTGMLRVSSIHEIYYEESGNP 225
            DLYP  EPY++G LRVS +HEIYYE+SGNP
Sbjct:   14 DLYPEIEPYQSGFLRVSDLHEIYYEQSGNP 43
[Close]
BLAST of mRNA_H-akashiwo_Contig118.18.1 vs. uniprot
Match: A0A850T0C1_9PROT (Proline iminopeptidase (Fragment) n=1 Tax=Parvularculaceae bacterium TaxID=2510335 RepID=A0A850T0C1_9PROT)

HSP 1 Score: 53.1 bits (126), Expect = 1.390e-6
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1 
Query:  130 RLDLYPLPEPYRTGMLRVSSIHEIYYEESGNP 225
            RLDLYP  EPY TG ++VS IH+IY+E SGNP
Sbjct:    4 RLDLYPAIEPYETGRIKVSDIHDIYFEVSGNP 35
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig118.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A841HQ80_9GAMM3.460e-770.59Proline iminopeptidase n=1 Tax=Povalibacter uvarum... [more]
A0A1D1VVC5_RAMVA5.860e-773.33Prolyl aminopeptidase n=1 Tax=Ramazzottius varieor... [more]
A0A355C3X0_9PROT6.220e-767.65Proline iminopeptidase n=2 Tax=Parvularcula sp. Ta... [more]
A0A813YL08_9BILA7.120e-770.00Prolyl aminopeptidase n=1 Tax=Adineta steineri Tax... [more]
A0A813W5Z2_9BILA7.630e-770.00Prolyl aminopeptidase n=1 Tax=Adineta steineri Tax... [more]
A0A452ZJL7_AEGTS1.010e-667.65Prolyl aminopeptidase n=1 Tax=Aegilops tauschii su... [more]
A0A6G6WVA5_9HYPH1.170e-673.53Proline iminopeptidase n=2 Tax=Hyphomicrobiales Ta... [more]
F2BE55_9NEIS1.200e-656.10Proline iminopeptidase n=4 Tax=Neisseria TaxID=482... [more]
A0A1D1VU11_RAMVA1.360e-673.33Proline iminopeptidase n=1 Tax=Ramazzottius varieo... [more]
A0A850T0C1_9PROT1.390e-668.75Proline iminopeptidase (Fragment) n=1 Tax=Parvular... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig118contigH-akashiwo_Contig118:634562..635117 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1116369.KB890024_gene439
PFAMsAbhydrolase_1
Model size227
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K01259
KEGG ReactionR00135
KEGG Pathwayko00330,map00330
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.66e-07
EggNOG OGsCOG0596@1|root,COG0596@2|Bacteria,1MWW8@1224|Proteobacteria,2TS53@28211|Alphaproteobacteria,43ID2@69277|Phyllobacteriaceae
EC3.4.11.5
DescriptionBelongs to the peptidase S33 family
Cds size225
COG categoryE
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387108.5983245-CDS-H-akashiwo_Contig118:634561..6346851681387108.5983245-CDS-H-akashiwo_Contig118:634561..634685Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig118 634562..634685 +
1681387108.614465-CDS-H-akashiwo_Contig118:635015..6351161681387108.614465-CDS-H-akashiwo_Contig118:635015..635116Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig118 635016..635116 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig118.18.1prot_H-akashiwo_Contig118.18.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig118 634562..635116 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig118.18.1

>prot_H-akashiwo_Contig118.18.1 ID=prot_H-akashiwo_Contig118.18.1|Name=mRNA_H-akashiwo_Contig118.18.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=75bp
AVSVASYSNDTSNKNTVAHAEQDQTASKVFDDDYKESPENKANRLDLYPL
PEPYRTGMLRVSSIHEIYYEESGNP
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mRNA from alignment at H-akashiwo_Contig118:634562..635117+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig118.18.1 ID=mRNA_H-akashiwo_Contig118.18.1|Name=mRNA_H-akashiwo_Contig118.18.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=556bp|location=Sequence derived from alignment at H-akashiwo_Contig118:634562..635117+ (Heterosigma akashiwo CCMP452)
GCTGTAAGTGTGGCAAGCTATTCCAACGACACCAGCAACAAAAACACTGT
TGCCCATGCTGAGCAGGATCAAACTGCGAGCAAAGTTTTCGATGATGACT
ACAAAGAATCCCCGGAAAACAAAGGTTTAACAAGCAGATAGCAATTTTTG
CTATCCCCTCCTGTTATCATAACCAAATGATAACTGCTCCATCGAGTCGA
GTGCATCATCCAATCATTAATGATGAAGGAGTAGTTTCCTGTTGGAAGGA
AAAAAAAAATACTATTACTACAAAAAAATAATGTTTGTTTCGGCCAAAAA
CTGTATGTTTTGGTGTACACACCATCCCAACTGCACTTCAATCCTACCAC
ACAGTGAGGGTGTCGTTGAAAATGAAGCAATATTCAGATATTTGCACTTG
CTTGCTCCACATACTTCCCTGTACCAACGCTGTGACCTCTGGGTGTTGAT
GCAGCGAATCGGTTGGACCTGTACCCTCTCCCTGAGCCCTATCGAACTGG
GATGTTGAGAGTGTCCAGTATCCATGAAATTTACTATGAGGAGAGTGGCA
ATCCCC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig118:634562..635117+

>mRNA_H-akashiwo_Contig118.18.1 ID=mRNA_H-akashiwo_Contig118.18.1|Name=mRNA_H-akashiwo_Contig118.18.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=225bp|location=Sequence derived from alignment at H-akashiwo_Contig118:634562..635117+ (Heterosigma akashiwo CCMP452)
GCTGTAAGTGTGGCAAGCTATTCCAACGACACCAGCAACAAAAACACTGT
TGCCCATGCTGAGCAGGATCAAACTGCGAGCAAAGTTTTCGATGATGACT
ACAAAGAATCCCCGGAAAACAAAGCGAATCGGTTGGACCTGTACCCTCTC
CCTGAGCCCTATCGAACTGGGATGTTGAGAGTGTCCAGTATCCATGAAAT
TTACTATGAGGAGAGTGGCAATCCC
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