mRNA_H-akashiwo_Contig1177.9.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1177.9.1
Unique NamemRNA_H-akashiwo_Contig1177.9.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1177.9.1 vs. uniprot
Match: A0A7S2UXP3_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP3_9STRA)

HSP 1 Score: 305 bits (781), Expect = 2.420e-104
Identity = 144/171 (84.21%), Postives = 154/171 (90.06%), Query Frame = 1
Query:    1 MANPVVFFDMTIGGSPAGRITMTLRADVVPRTAENFRALCTGEKGTGRSGVPLHFKGSKFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFQDENFRLNHTGRGILSMANAGPNTNGSQFFLCTAETSWLDGKHVVFGSVTDGMEVVEAIEAVGSQSGTTRQDCVIADCGQL 513
            MANPVVFFD+TIGG  AGR+ MTLRADVVPRTAENFR LCTGEKGTGRSG PLHFKGS FHRVIP FMCQGGDFTRGNGTGGESIYGEKF DENF+L HTG GILSMANAGPNTNGSQFFLCT ET+WLDGKHVVFGSVT+GM+VV+A+E+VGS SG T    +IADCGQL
Sbjct:    1 MANPVVFFDLTIGGQAAGRVEMTLRADVVPRTAENFRCLCTGEKGTGRSGKPLHFKGSSFHRVIPDFMCQGGDFTRGNGTGGESIYGEKFADENFQLRHTGPGILSMANAGPNTNGSQFFLCTTETAWLDGKHVVFGSVTNGMDVVKAVESVGSGSGRTSAPVIIADCGQL 171          
BLAST of mRNA_H-akashiwo_Contig1177.9.1 vs. uniprot
Match: A0A812VDW2_9DINO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812VDW2_9DINO)

HSP 1 Score: 302 bits (774), Expect = 1.960e-102
Identity = 144/172 (83.72%), Postives = 153/172 (88.95%), Query Frame = 1
Query:    1 MANPVVFFDMTIGGSPAGRITMTLRADVVPRTAENFRALCTGEKGTGRSGVPLHFKGSKFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFQDENFRLNHTGRGILSMANAGPNTNGSQFFLCTAETSWLDGKHVVFGSVTDGMEVVEAIEAVGSQSGTTRQDCVIADCGQLS 516
            MA PVVFFDM+IGG+PAGRITM LRADV P+TAENFRALCTGEKGTG+SG PLHFKGS FHRVIP FMCQGGDFT GNGTGGESIYG KF DENF L HTG GILSMANAGPNTNGSQFFLCT +T WLDGKHVVFGSVTDGM+VV+ IEAVGSQSG T +  VIADCGQL+
Sbjct:   57 MAKPVVFFDMSIGGTPAGRITMELRADVAPKTAENFRALCTGEKGTGKSGKPLHFKGSAFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFADENFTLKHTGPGILSMANAGPNTNGSQFFLCTVKTQWLDGKHVVFGSVTDGMDVVKKIEAVGSQSGKTSKPVVIADCGQLA 228          
BLAST of mRNA_H-akashiwo_Contig1177.9.1 vs. uniprot
Match: R1FGE2_EMIHU (Peptidyl-prolyl cis-trans isomerase n=14 Tax=Eukaryota TaxID=2759 RepID=R1FGE2_EMIHU)

HSP 1 Score: 297 bits (760), Expect = 3.850e-101
Identity = 143/172 (83.14%), Postives = 152/172 (88.37%), Query Frame = 1
Query:    1 MANPVVFFDMTIGGSPAGRITMTLRADVVPRTAENFRALCTGEKGTGRSGVPLHFKGSKFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFQDENFRLNHTGRGILSMANAGPNTNGSQFFLCTAETSWLDGKHVVFGSVTDGMEVVEAIEAVGSQSGTTRQDCVIADCGQLS 516
            M+ PVVFFDMTIGG+PAGRI MTLRADVVP+TAENFRALCTGEKG G+SG PLHFKGS FHRVI  FMCQGGDFT GNGTGGESIYG KF DENF+L HTG GILSMANAGP TNGSQFFLCT +T WLDGKHVVFGSVT GMEVV+AIEAVGSQSG T +  VIADCGQ+S
Sbjct:    1 MSCPVVFFDMTIGGAPAGRIEMTLRADVVPKTAENFRALCTGEKGMGKSGKPLHFKGSAFHRVITNFMCQGGDFTAGNGTGGESIYGAKFADENFQLKHTGPGILSMANAGPGTNGSQFFLCTVKTDWLDGKHVVFGSVTKGMEVVKAIEAVGSQSGQTAKKVVIADCGQIS 172          
BLAST of mRNA_H-akashiwo_Contig1177.9.1 vs. uniprot
Match: A0A7J7LRU5_9MAGN (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7LRU5_9MAGN)

HSP 1 Score: 296 bits (759), Expect = 5.470e-101
Identity = 138/171 (80.70%), Postives = 150/171 (87.72%), Query Frame = 1
Query:    1 MANPVVFFDMTIGGSPAGRITMTLRADVVPRTAENFRALCTGEKGTGRSGVPLHFKGSKFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFQDENFRLNHTGRGILSMANAGPNTNGSQFFLCTAETSWLDGKHVVFGSVTDGMEVVEAIEAVGSQSGTTRQDCVIADCGQL 513
            M+NP VFFDMT+GGSP GRI M L ADV P+TAENFRALCTGEKG GRSG PLHFKGSKFHRVIP FMCQGGDFT GNGTGGESIYGEKF DENF+L HTG GILSMANAGPNTNGSQFF+CT +T+WLDGKHVVFG V +G++VV AIE VGSQSGTT+Q   +ADCGQL
Sbjct:    1 MSNPKVFFDMTVGGSPTGRIVMELFADVTPKTAENFRALCTGEKGNGRSGKPLHFKGSKFHRVIPQFMCQGGDFTAGNGTGGESIYGEKFADENFKLKHTGPGILSMANAGPNTNGSQFFICTEKTAWLDGKHVVFGKVVEGLDVVRAIEKVGSQSGTTKQPVAVADCGQL 171          
BLAST of mRNA_H-akashiwo_Contig1177.9.1 vs. uniprot
Match: A0A7S3GSQ9_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GSQ9_9STRA)

HSP 1 Score: 296 bits (757), Expect = 1.140e-100
Identity = 140/172 (81.40%), Postives = 151/172 (87.79%), Query Frame = 1
Query:    1 MANPVVFFDMTIGGSPAGRITMTLRADVVPRTAENFRALCTGEKGTGRSGVPLHFKGSKFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFQDENFRLNHTGRGILSMANAGPNTNGSQFFLCTAETSWLDGKHVVFGSVTDGMEVVEAIEAVGSQSGTTRQDCVIADCGQLS 516
            M+NP VFFDMTIGG+PAGRITM LRADV P+TAENFRALCTGEKGTG SG PLHFKGS FHRVI  FMCQGGDFTRGNGTGGESIYG KF DENF+L HTG GILSMANAGPNTNGSQFFLCTA T+WLDGKHVVFG VTDG+++V+ IE VGSQSG T Q  +I DCG+LS
Sbjct:    1 MSNPKVFFDMTIGGAPAGRITMELRADVAPKTAENFRALCTGEKGTGPSGKPLHFKGSAFHRVITDFMCQGGDFTRGNGTGGESIYGAKFADENFKLKHTGAGILSMANAGPNTNGSQFFLCTANTAWLDGKHVVFGIVTDGLDIVKKIEGVGSQSGKTSQAVMIEDCGELS 172          
BLAST of mRNA_H-akashiwo_Contig1177.9.1 vs. uniprot
Match: A3E3L5_PFIPI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pfiesteria piscicida TaxID=71001 RepID=A3E3L5_PFIPI)

HSP 1 Score: 295 bits (756), Expect = 1.510e-100
Identity = 142/171 (83.04%), Postives = 148/171 (86.55%), Query Frame = 1
Query:    1 MANPVVFFDMTIGGSPAGRITMTLRADVVPRTAENFRALCTGEKGTGRSGVPLHFKGSKFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFQDENFRLNHTGRGILSMANAGPNTNGSQFFLCTAETSWLDGKHVVFGSVTDGMEVVEAIEAVGSQSGTTRQDCVIADCGQL 513
            MANP VFFDMTIGGSPAGRITM LRADV P+TAENFRALCTGEKG G+SG PLHFKGS FHRVIP FMCQGGDFT  N TGGESIYG KF DENF L HTG GILSMANAGP TNGSQFFLCT +T+WLDGKHVVFGSV DGM+VV+ IEAVGSQSG T Q  VIADCGQL
Sbjct:    1 MANPKVFFDMTIGGSPAGRITMELRADVAPKTAENFRALCTGEKGVGKSGKPLHFKGSSFHRVIPDFMCQGGDFTNHNSTGGESIYGAKFADENFTLKHTGPGILSMANAGPGTNGSQFFLCTVKTAWLDGKHVVFGSVVDGMDVVKKIEAVGSQSGKTAQPVVIADCGQL 171          
BLAST of mRNA_H-akashiwo_Contig1177.9.1 vs. uniprot
Match: A0A8J5G660_ZINOF (PPIase cyclophilin-type domain-containing protein n=6 Tax=cellular organisms TaxID=131567 RepID=A0A8J5G660_ZINOF)

HSP 1 Score: 295 bits (755), Expect = 2.230e-100
Identity = 139/170 (81.76%), Postives = 151/170 (88.82%), Query Frame = 1
Query:    4 ANPVVFFDMTIGGSPAGRITMTLRADVVPRTAENFRALCTGEKGTGRSGVPLHFKGSKFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFQDENFRLNHTGRGILSMANAGPNTNGSQFFLCTAETSWLDGKHVVFGSVTDGMEVVEAIEAVGSQSGTTRQDCVIADCGQL 513
            +NP VFFDMT+GG+PAGRI M L ADVVPRTAENFRALCTGEKG GRSG PLH+KGS  HRVIPGFMCQGGDFTRGNGTGGESIYGEKF DENF   HTG G+LSMAN+G NTNGSQFF+CTAETSWLDGKHVVFG V +GM+VV+AIEAVGSQSG T++  VIADCGQL
Sbjct:    3 SNPRVFFDMTVGGAPAGRIVMDLYADVVPRTAENFRALCTGEKGVGRSGKPLHYKGSSLHRVIPGFMCQGGDFTRGNGTGGESIYGEKFADENFVKKHTGPGVLSMANSGANTNGSQFFICTAETSWLDGKHVVFGRVVEGMDVVKAIEAVGSQSGATKKPVVIADCGQL 172          
BLAST of mRNA_H-akashiwo_Contig1177.9.1 vs. uniprot
Match: A0A835YSF2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSF2_9STRA)

HSP 1 Score: 295 bits (755), Expect = 2.230e-100
Identity = 143/172 (83.14%), Postives = 147/172 (85.47%), Query Frame = 1
Query:    1 MANPVVFFDMTIGGSPAGRITMTLRADVVPRTAENFRALCTGEKGTGRSGVPLHFKGSKFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFQDENFRLNHTGRGILSMANAGPNTNGSQFFLCTAETSWLDGKHVVFGSVTDGMEVVEAIEAVGSQSGTTRQDCVIADCGQLS 516
            MANPVV+FDMTIGG PAGRI MTLR DVVP TAENFRALCTGEKG GR G  LHFKGS FHRVI  FMCQGGDFT+GNGTGGESIYGEKF+DENF L HTG GILSMANAGPNTNGSQFFLCT  T WLDGKH VFGSVT GMEVV AIEAVGS SG T +  VIADCGQLS
Sbjct:    1 MANPVVYFDMTIGGQPAGRIEMTLRKDVVPNTAENFRALCTGEKGVGRMGKALHFKGSSFHRVITDFMCQGGDFTKGNGTGGESIYGEKFRDENFTLKHTGPGILSMANAGPNTNGSQFFLCTVPTPWLDGKHCVFGSVTKGMEVVRAIEAVGSSSGKTSKPVVIADCGQLS 172          
BLAST of mRNA_H-akashiwo_Contig1177.9.1 vs. uniprot
Match: A0A1V5XI99_9DELT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Deltaproteobacteria bacterium ADurb.Bin207 TaxID=1852869 RepID=A0A1V5XI99_9DELT)

HSP 1 Score: 295 bits (754), Expect = 3.050e-100
Identity = 137/171 (80.12%), Postives = 152/171 (88.89%), Query Frame = 1
Query:    1 MANPVVFFDMTIGGSPAGRITMTLRADVVPRTAENFRALCTGEKGTGRSGVPLHFKGSKFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFQDENFRLNHTGRGILSMANAGPNTNGSQFFLCTAETSWLDGKHVVFGSVTDGMEVVEAIEAVGSQSGTTRQDCVIADCGQL 513
            MANP VFFD+TIGG+PAGR+T  L ADVVP+TAENFRALCTGEKG GRSG PLHFKGS FHR+IP FMCQGGDFTRGNGTGGESIYGEKF DENF+L H+G G LSMANAGPNTNGSQFF+CTA+TSWLDGKHVVFG V DGM+VV+ +EAVGS++G T +  VIADCGQL
Sbjct:    1 MANPQVFFDITIGGAPAGRVTFELFADVVPKTAENFRALCTGEKGMGRSGKPLHFKGSSFHRIIPNFMCQGGDFTRGNGTGGESIYGEKFADENFKLKHSGPGTLSMANAGPNTNGSQFFICTADTSWLDGKHVVFGRVIDGMQVVQQMEAVGSRNGATSKPVVIADCGQL 171          
BLAST of mRNA_H-akashiwo_Contig1177.9.1 vs. uniprot
Match: A0A813EJY6_POLGL (Peptidyl-prolyl cis-trans isomerase n=9 Tax=Sar TaxID=2698737 RepID=A0A813EJY6_POLGL)

HSP 1 Score: 294 bits (752), Expect = 6.380e-100
Identity = 138/172 (80.23%), Postives = 149/172 (86.63%), Query Frame = 1
Query:    1 MANPVVFFDMTIGGSPAGRITMTLRADVVPRTAENFRALCTGEKGTGRSGVPLHFKGSKFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFQDENFRLNHTGRGILSMANAGPNTNGSQFFLCTAETSWLDGKHVVFGSVTDGMEVVEAIEAVGSQSGTTRQDCVIADCGQLS 516
            M+NP VFFDMTIGG+PAGRI M LRADV P+T ENFRALCTGEKGTG+SG PLHFKGS FHRVIP FMCQGGDFT GNGTGGESIYG KF DENF L HTG GILSMANAGPNTNGSQFFLCT +T+WLDGKH VFG VT+GM++V+ IE VGSQSG T Q  VIADCGQL+
Sbjct:    1 MSNPKVFFDMTIGGAPAGRIVMDLRADVTPKTVENFRALCTGEKGTGKSGKPLHFKGSAFHRVIPDFMCQGGDFTAGNGTGGESIYGAKFADENFTLKHTGPGILSMANAGPNTNGSQFFLCTVKTAWLDGKHCVFGQVTEGMDIVKKIEGVGSQSGKTAQPVVIADCGQLA 172          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1177.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2UXP3_9STRA2.420e-10484.21Peptidyl-prolyl cis-trans isomerase n=1 Tax=Fibroc... [more]
A0A812VDW2_9DINO1.960e-10283.72Peptidyl-prolyl cis-trans isomerase n=1 Tax=Symbio... [more]
R1FGE2_EMIHU3.850e-10183.14Peptidyl-prolyl cis-trans isomerase n=14 Tax=Eukar... [more]
A0A7J7LRU5_9MAGN5.470e-10180.70Peptidyl-prolyl cis-trans isomerase n=2 Tax=Kingdo... [more]
A0A7S3GSQ9_9STRA1.140e-10081.40Peptidyl-prolyl cis-trans isomerase n=1 Tax=Spumel... [more]
A3E3L5_PFIPI1.510e-10083.04Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pfiest... [more]
A0A8J5G660_ZINOF2.230e-10081.76PPIase cyclophilin-type domain-containing protein ... [more]
A0A835YSF2_9STRA2.230e-10083.14Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A1V5XI99_9DELT3.050e-10080.12Peptidyl-prolyl cis-trans isomerase n=1 Tax=Deltap... [more]
A0A813EJY6_POLGL6.380e-10080.23Peptidyl-prolyl cis-trans isomerase n=9 Tax=Sar Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1177contigH-akashiwo_Contig1177:177260..177778 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2903.EOD20130
PFAMsPro_isomerase
Model size519
Max annot lvl2759|Eukaryota
KEGG koko:K01802
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.89e-103
EggNOG OGsCOG0652@1|root,KOG0865@2759|Eukaryota
EC5.2.1.8
Descriptionpeptidyl-prolyl cis-trans isomerase activity
Cds size519
COG categoryO
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387106.842784-CDS-H-akashiwo_Contig1177:177259..1777781681387106.842784-CDS-H-akashiwo_Contig1177:177259..177778Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1177 177260..177778 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1177.9.1prot_H-akashiwo_Contig1177.9.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1177 177260..177778 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1177.9.1

>prot_H-akashiwo_Contig1177.9.1 ID=prot_H-akashiwo_Contig1177.9.1|Name=mRNA_H-akashiwo_Contig1177.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=173bp
MANPVVFFDMTIGGSPAGRITMTLRADVVPRTAENFRALCTGEKGTGRSG
VPLHFKGSKFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFQDENFRLNHT
GRGILSMANAGPNTNGSQFFLCTAETSWLDGKHVVFGSVTDGMEVVEAIE
AVGSQSGTTRQDCVIADCGQLS*
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mRNA from alignment at H-akashiwo_Contig1177:177260..177778-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1177.9.1 ID=mRNA_H-akashiwo_Contig1177.9.1|Name=mRNA_H-akashiwo_Contig1177.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=519bp|location=Sequence derived from alignment at H-akashiwo_Contig1177:177260..177778- (Heterosigma akashiwo CCMP452)
ATGGCCAACCCTGTTGTCTTCTTCGACATGACTATTGGTGGTTCCCCTGC TGGGCGCATCACTATGACTCTTCGTGCTGATGTCGTCCCCAGAACTGCTG AGAACTTCCGTGCTCTCTGCACTGGCGAGAAAGGTACCGGGCGCAGCGGG GTGCCTCTCCACTTCAAGGGGAGCAAATTTCACAGAGTGATCCCCGGTTT CATGTGCCAGGGTGGGGACTTCACTCGTGGTAACGGGACTGGCGGTGAGT CAATCTATGGCGAAAAGTTCCAGGACGAGAACTTCCGGCTCAATCACACT GGCCGTGGCATTCTCTCTATGGCCAACGCCGGCCCAAACACAAACGGCTC CCAATTCTTTTTGTGCACTGCCGAGACATCTTGGCTGGATGGCAAGCACG TCGTGTTCGGCTCAGTCACCGATGGTATGGAAGTAGTGGAAGCTATCGAG GCAGTTGGATCTCAGAGCGGCACGACCCGCCAGGACTGTGTCATTGCGGA CTGTGGCCAGCTTTCTTAA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1177:177260..177778-

>mRNA_H-akashiwo_Contig1177.9.1 ID=mRNA_H-akashiwo_Contig1177.9.1|Name=mRNA_H-akashiwo_Contig1177.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=519bp|location=Sequence derived from alignment at H-akashiwo_Contig1177:177260..177778- (Heterosigma akashiwo CCMP452)
ATGGCCAACCCTGTTGTCTTCTTCGACATGACTATTGGTGGTTCCCCTGC
TGGGCGCATCACTATGACTCTTCGTGCTGATGTCGTCCCCAGAACTGCTG
AGAACTTCCGTGCTCTCTGCACTGGCGAGAAAGGTACCGGGCGCAGCGGG
GTGCCTCTCCACTTCAAGGGGAGCAAATTTCACAGAGTGATCCCCGGTTT
CATGTGCCAGGGTGGGGACTTCACTCGTGGTAACGGGACTGGCGGTGAGT
CAATCTATGGCGAAAAGTTCCAGGACGAGAACTTCCGGCTCAATCACACT
GGCCGTGGCATTCTCTCTATGGCCAACGCCGGCCCAAACACAAACGGCTC
CCAATTCTTTTTGTGCACTGCCGAGACATCTTGGCTGGATGGCAAGCACG
TCGTGTTCGGCTCAGTCACCGATGGTATGGAAGTAGTGGAAGCTATCGAG
GCAGTTGGATCTCAGAGCGGCACGACCCGCCAGGACTGTGTCATTGCGGA
CTGTGGCCAGCTTTCTTAA
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