mRNA_H-akashiwo_Contig1177.12.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1177.12.1 vs. uniprot
Match: A0A7R9UFC7_9STRA (ATP synthase subunit beta n=3 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7R9UFC7_9STRA) HSP 1 Score: 428 bits (1101), Expect = 8.590e-142 Identity = 220/248 (88.71%), Postives = 235/248 (94.76%), Query Frame = 1
Query: 742 RSRVALTGLTIAEYFRDQEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIGEEHYQTAREVQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFHVAEVFTGIKGRFVSLEDSIKGFREILSGQHDEIPEGAFYMVGGINEVQEKAAAMAAS 1485
R+RVALTGL IAEYFRDQEGQDVLLFVDNIFRFTQA +EVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRMLDPRI+GEEHY+ AR +QKLLQDYK LQDIIAILGMDELSEDDKLTVARARKV+RF+SQPFHVAEVFTG G+FV+L+DSIK F+EILSG HDE+PEGAFYMVGGI++V +KA MAAS
Sbjct: 302 RARVALTGLAIAEYFRDQEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRIVGEEHYELARAIQKLLQDYKSLQDIIAILGMDELSEDDKLTVARARKVERFLSQPFHVAEVFTGTPGKFVALDDSIKAFKEILSGAHDELPEGAFYMVGGIDDVIQKAKDMAAS 549
BLAST of mRNA_H-akashiwo_Contig1177.12.1 vs. uniprot
Match: A0A7S2EIC6_TRICV (ATP synthase subunit beta n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EIC6_TRICV) HSP 1 Score: 421 bits (1081), Expect = 1.780e-139 Identity = 213/245 (86.94%), Postives = 232/245 (94.69%), Query Frame = 1
Query: 742 RSRVALTGLTIAEYFRDQEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIGEEHYQTAREVQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFHVAEVFTGIKGRFVSLEDSIKGFREILSGQHDEIPEGAFYMVGGINEVQEKAAAM 1476
R+RVALTGL IAEYFRD+EGQDVLLFVDNIFRFTQA SEVSALLGRIPSAVGYQPTLATDMGALQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRML PR+IG+EHY+ AR QKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQ+FMSQPFHVAEVFTG G+FVSLE +I+GF++I++G+HD++PEGAFYMVG ++EV+EKAA M
Sbjct: 254 RARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRMLTPRVIGDEHYEVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPFHVAEVFTGTAGKFVSLEQTIQGFKQIINGEHDDLPEGAFYMVGNVDEVKEKAAGM 498
BLAST of mRNA_H-akashiwo_Contig1177.12.1 vs. uniprot
Match: D7FXG1_ECTSI (ATP synthase subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXG1_ECTSI) HSP 1 Score: 420 bits (1080), Expect = 3.270e-139 Identity = 220/249 (88.35%), Postives = 231/249 (92.77%), Query Frame = 1
Query: 742 RSRVALTGLTIAEYFRDQEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIGEEHYQTAREVQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFHVAEVFTGIKGRFVSLEDSIKGFREILSGQHDEIPEGAFYMVGGINEVQEKAAAMAASA 1488
R+RVALTGLTIAEYFRD EGQDVLLFVDNIFRFTQA +EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPR+IG+EHY+TAR QKLLQDYKGLQ+IIAILGMDELSEDDKLTVARARKVQRFMSQPF VAEVFTG KG FVSLED+IKGF+EILSG HD++PEGAFYMVG I V KA +A SA
Sbjct: 259 RARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQEIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYMVGDIASVGVKAKQLAESA 507
BLAST of mRNA_H-akashiwo_Contig1177.12.1 vs. uniprot
Match: A0A1E7FRE4_9STRA (ATP synthase subunit beta n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A1E7FRE4_9STRA) HSP 1 Score: 419 bits (1076), Expect = 1.080e-138 Identity = 215/245 (87.76%), Postives = 229/245 (93.47%), Query Frame = 1
Query: 742 RSRVALTGLTIAEYFRDQEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIGEEHYQTAREVQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFHVAEVFTGIKGRFVSLEDSIKGFREILSGQHDEIPEGAFYMVGGINEVQEKAAAM 1476
R+RVALTGL IAEYFRD+EGQDVLLFVDNIFRFTQA SEVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRMLDPR+IG EHY+ AR QKLLQDYKGLQDIIAILGMDELSEDDKLTV+RARKV +FMSQPFHVAEVFTG G+FVSLEDSIKGF+EI+SG +D +PE AFYMVGGI++V+EKAA M
Sbjct: 256 RARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGGLQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRVIGNEHYEVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVSRARKVMKFMSQPFHVAEVFTGTAGKFVSLEDSIKGFKEIISGDYDHLPELAFYMVGGIDDVKEKAANM 500
BLAST of mRNA_H-akashiwo_Contig1177.12.1 vs. uniprot
Match: A0A7S3HGV8_9STRA (ATP synthase subunit beta n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S3HGV8_9STRA) HSP 1 Score: 418 bits (1075), Expect = 3.750e-138 Identity = 220/249 (88.35%), Postives = 229/249 (91.97%), Query Frame = 1
Query: 742 RSRVALTGLTIAEYFRDQEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIGEEHYQTAREVQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFHVAEVFTGIKGRFVSLEDSIKGFREILSGQHDEIPEGAFYMVGGINEVQEKAAAMAASA 1488
R+RVALTGL IAEYFRDQEGQDVLLFVDNIFRFTQA SEVSALLGRIPSAVGYQPTLATDMG LQERITST GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPR+IGE HYQTAR QKLLQDYKGLQDIIAILGMDELSEDDKLTVARARK QRFMSQPFHVAEVFTG GRFV LED+IKGF+EILSG+ D +PE AFYM G I EV+E AA +AA+A
Sbjct: 282 RARVALTGLAIAEYFRDQEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGLLQERITSTGVGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGEVHYQTARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKAQRFMSQPFHVAEVFTGRGGRFVQLEDTIKGFQEILSGKLDSLPESAFYMSGNIEEVKETAAKLAATA 530
BLAST of mRNA_H-akashiwo_Contig1177.12.1 vs. uniprot
Match: A0A7S2SJ94_9STRA (ATP synthase subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ94_9STRA) HSP 1 Score: 417 bits (1072), Expect = 5.600e-138 Identity = 217/246 (88.21%), Postives = 228/246 (92.68%), Query Frame = 1
Query: 742 RSRVALTGLTIAEYFRDQEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIGEEHYQTAREVQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFHVAEVFTGIKGRFVSLEDSIKGFREILSGQHDEIPEGAFYMVGGINEVQEKAAAMA 1479
R+RVALTGLTIAEYFRD+EGQDVLLFVDNIFRFTQA SEVSALLGRIPSAVGYQPTLATDMGALQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IA LGIYPAVDPLDSTSRMLDPR++G+ HY+ AR QKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPF VAEVFTG KG+FVSLED+IKGF EIL+G+HD+IPE AFYM G I EV E A AMA
Sbjct: 264 RARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTQKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRNIASLGIYPAVDPLDSTSRMLDPRVLGDTHYEMARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGKFVSLEDTIKGFGEILAGEHDDIPEAAFYMKGDIAEVLESAKAMA 509
BLAST of mRNA_H-akashiwo_Contig1177.12.1 vs. uniprot
Match: A0A1Z5JNL5_FISSO (ATP synthase subunit beta n=2 Tax=Bacillariophycidae TaxID=33850 RepID=A0A1Z5JNL5_FISSO) HSP 1 Score: 416 bits (1070), Expect = 8.110e-138 Identity = 214/246 (86.99%), Postives = 227/246 (92.28%), Query Frame = 1
Query: 742 RSRVALTGLTIAEYFRDQEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIGEEHYQTAREVQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFHVAEVFTGIKGRFVSLEDSIKGFREILSGQHDEIPEGAFYMVGGINEVQEKAAAMA 1479
R+RVALTGL IAEYFRD+EGQDVLLFVDNIFRFTQA SEVSALLGRIPSAVGYQPTLATDMGALQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDSTSRMLDPR+IG+ HY AR QKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQ+FMSQPFHVAEVFTG G+FVSLED+I GF EI+SG +D +PEGAFYMVG I +V+ KA+ MA
Sbjct: 254 RARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRVIGQRHYDVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPFHVAEVFTGTAGKFVSLEDTINGFSEIISGAYDSLPEGAFYMVGNIEDVKAKASTMA 499
BLAST of mRNA_H-akashiwo_Contig1177.12.1 vs. uniprot
Match: A0A836CJ45_9STRA (ATP synthase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ45_9STRA) HSP 1 Score: 416 bits (1069), Expect = 1.390e-137 Identity = 218/248 (87.90%), Postives = 227/248 (91.53%), Query Frame = 1
Query: 742 RSRVALTGLTIAEYFRDQEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIGEEHYQTAREVQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFHVAEVFTGIKGRFVSLEDSIKGFREILSGQHDEIPEGAFYMVGGINEVQEKAAAMAAS 1485
R+RVALTGLTIAEYFRD EGQDVLLFVDNIFRFTQA +EVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIG+EHY+ AR QKLLQDYK LQDIIAILGMDELSEDDKLTVARARKVQRFMSQPF VAEVFTG KG FV LED+I GF+EILSG HD++PE AFYMVG I V KA +A S
Sbjct: 258 RARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIGDEHYKVARATQKLLQDYKSLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVKLEDTISGFKEILSGAHDDLPEAAFYMVGDITSVVAKAKKLAES 505
BLAST of mRNA_H-akashiwo_Contig1177.12.1 vs. uniprot
Match: A0A522X3H2_9PROT (F0F1 ATP synthase subunit beta (Fragment) n=1 Tax=Magnetospirillum sp. TaxID=31872 RepID=A0A522X3H2_9PROT) HSP 1 Score: 405 bits (1042), Expect = 2.840e-137 Identity = 204/249 (81.93%), Postives = 230/249 (92.37%), Query Frame = 1
Query: 742 RSRVALTGLTIAEYFRDQEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIGEEHYQTAREVQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFHVAEVFTGIKGRFVSLEDSIKGFREILSGQHDEIPEGAFYMVGGINEVQEKAAAMAASA 1488
R+RVAL+GLT+AEYFRD EGQDVL FVDNIFRFTQA SEVSALLGRIPSAVGYQPTLATDMGALQERITST KGSITSVQA+YVPADDLTDPAPAT+FAHLDATTVL+RQIAELGIYPAVDPLDSTSR+LDPR++G +HYQTAR+VQ++LQ YK LQDIIAILGMDELSE+DKL V+RARK+QRF+SQPFHVAE+FTG G+ VSLE++IKGF+ I+SG++D +PE AFYMVGGI EV EKA MAA A
Sbjct: 3 RARVALSGLTVAEYFRDVEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTKKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRQIAELGIYPAVDPLDSTSRVLDPRVVGNDHYQTARDVQRILQTYKSLQDIIAILGMDELSEEDKLVVSRARKIQRFLSQPFHVAEIFTGSPGKLVSLEETIKGFKAIVSGEYDHLPESAFYMVGGIEEVVEKAKKMAADA 251
BLAST of mRNA_H-akashiwo_Contig1177.12.1 vs. uniprot
Match: A0A2S6RB45_9PROT (ATP-synt_ab domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium MarineAlpha9_Bin4 TaxID=2013099 RepID=A0A2S6RB45_9PROT) HSP 1 Score: 405 bits (1040), Expect = 4.950e-136 Identity = 203/246 (82.52%), Postives = 228/246 (92.68%), Query Frame = 1
Query: 742 RSRVALTGLTIAEYFRDQEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDMGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRIIGEEHYQTAREVQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQRFMSQPFHVAEVFTGIKGRFVSLEDSIKGFREILSGQHDEIPEGAFYMVGGINEVQEKAAAMA 1479
R+RV L+GLT+AEYFRD+EGQDVL FVDNIFRFTQA SEVSALLGRIPSAVGYQPTLATDMGALQERITST KGSITSVQA+YVPADDLTDPAPAT+F+HLDATTVLSRQIAELGIYPAVDPLDSTSR+LDPRI+GEEHY+ AREVQ++LQ YK LQDIIAILGMDELSE+DKL VARARK+QRF+SQPFHVAEVFTG +G+FV ++D+IKGF+E+ SG++DEIPE AFYMVG I E EK+ MA
Sbjct: 64 RARVGLSGLTMAEYFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTNKGSITSVQAIYVPADDLTDPAPATSFSHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRILGEEHYEVAREVQRILQSYKSLQDIIAILGMDELSEEDKLVVARARKIQRFLSQPFHVAEVFTGFQGKFVDIKDTIKGFKELCSGKYDEIPEAAFYMVGTIEEALEKSKKMA 309 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1177.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1177.12.1 >prot_H-akashiwo_Contig1177.12.1 ID=prot_H-akashiwo_Contig1177.12.1|Name=mRNA_H-akashiwo_Contig1177.12.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=190bp MGALQERITSTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQback to top mRNA from alignment at H-akashiwo_Contig1177:310818..313063+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1177.12.1 ID=mRNA_H-akashiwo_Contig1177.12.1|Name=mRNA_H-akashiwo_Contig1177.12.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2246bp|location=Sequence derived from alignment at H-akashiwo_Contig1177:310818..313063+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1177:310818..313063+ >mRNA_H-akashiwo_Contig1177.12.1 ID=mRNA_H-akashiwo_Contig1177.12.1|Name=mRNA_H-akashiwo_Contig1177.12.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=570bp|location=Sequence derived from alignment at H-akashiwo_Contig1177:310818..313063+ (Heterosigma akashiwo CCMP452)back to top |