mRNA_H-akashiwo_Contig1176.5.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1176.5.1
Unique NamemRNA_H-akashiwo_Contig1176.5.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1176.5.1 vs. uniprot
Match: A0A6V2CUB4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2CUB4_9STRA)

HSP 1 Score: 360 bits (923), Expect = 1.220e-108
Identity = 182/425 (42.82%), Postives = 278/425 (65.41%), Query Frame = 1
Query:   22 SQASWKGHIWLLLAPGLLVDLLFLVDLYLQARCFFFLKEGLLVLDKDEVWVKFKAEHNLYLEALAALPWEAVAAGLGARWVHLVRLPKLLRLGKFAAYMGRVQTLMAESEKAISVTTRKFIELNLFMILACHWLGCLWIFCSDLGPHI-GYSYTWVIADAENSYNNITPEQLTGLGLYLRGVYWAMVATSTVGYGDIVPQNHLETSYTVFVILFGGLMVPAVVGGLAALIGNMNHAFKEFQKKMQLVRTFTRQKKFPRELRSKIFNYYDYLWTRQAGINEMEILENLSGPLREQVSVCVVGQALKSIPFFADCDDGLQKYMVSVLIPRVFLPKDVIIEAGDIGKEMYVIERGQVMVTNRDKSITFAILEEGDYFGEGCLLQGNMTRCGTLSATVSSIDYCDCFVLTKEGFNGVLVTY--PEYKDM 1287
            SQ+ ++  + +LL  G +VDL   ++  L+   F +++EGL+V D++ +  KF+ +HN++LE  + LP + +A   G+R+ +  RL K+ RL     Y+GR++ L+ ES+  +  + R+ I LN  MI+ CHW+GC W   +D+G  +  Y  +W  AD ++   +I+   L G   YLR VYWA+V  STVGYGDIVP N LET+++ F+ILFGGL++PAVVGGLAA +G+MN A K  ++K+  +R++ +++   + +  +I  YY YLW RQ G++E  I++ L GPLR++V+  V G A+  +PFFA CD+  ++ +VS L PRVFLP DVI + G++GKEM+ IERG+V+V++ D +I F  L  GDYFGE CL+ G   R     ATV ++ YCDCFVL+ + F  V+  Y  PE K++
Sbjct:  211 SQSEFR-DVAVLLILGYIVDLFCAINAILKFNFFMYMEEGLVVFDRECIRRKFRTQHNVFLELFSLLPVDFLAIWFGSRYYNAFRLTKICRLPSVLNYLGRIERLLTESKIGLDQSLRRVINLNFLMIVVCHWVGCAWYIVADIGTEVLSYDESWRDADEQDESLSISHTDLGGFSGYLRSVYWAIVGMSTVGYGDIVPTNALETTFSTFIILFGGLVLPAVVGGLAAYMGSMNIATKFHKRKVAKIRSYLKKQNIEKSILDRILRYYHYLWARQGGVDEQNIMDELPGPLRQRVATFVNGDAISCVPFFALCDNTTRELIVSTLKPRVFLPNDVITQQGELGKEMFFIERGEVVVSSMD-NIPFCTLSRGDYFGESCLI-GATVRV----ATVRALTYCDCFVLSNDDFREVIENYFSPERKNI 628          
BLAST of mRNA_H-akashiwo_Contig1176.5.1 vs. uniprot
Match: A0A6V2CY10_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2CY10_9STRA)

HSP 1 Score: 360 bits (923), Expect = 1.010e-107
Identity = 182/425 (42.82%), Postives = 278/425 (65.41%), Query Frame = 1
Query:   22 SQASWKGHIWLLLAPGLLVDLLFLVDLYLQARCFFFLKEGLLVLDKDEVWVKFKAEHNLYLEALAALPWEAVAAGLGARWVHLVRLPKLLRLGKFAAYMGRVQTLMAESEKAISVTTRKFIELNLFMILACHWLGCLWIFCSDLGPHI-GYSYTWVIADAENSYNNITPEQLTGLGLYLRGVYWAMVATSTVGYGDIVPQNHLETSYTVFVILFGGLMVPAVVGGLAALIGNMNHAFKEFQKKMQLVRTFTRQKKFPRELRSKIFNYYDYLWTRQAGINEMEILENLSGPLREQVSVCVVGQALKSIPFFADCDDGLQKYMVSVLIPRVFLPKDVIIEAGDIGKEMYVIERGQVMVTNRDKSITFAILEEGDYFGEGCLLQGNMTRCGTLSATVSSIDYCDCFVLTKEGFNGVLVTY--PEYKDM 1287
            SQ+ ++  + +LL  G +VDL   ++  L+   F +++EGL+V D++ +  KF+ +HN++LE  + LP + +A   G+R+ +  RL K+ RL     Y+GR++ L+ ES+  +  + R+ I LN  MI+ CHW+GC W   +D+G  +  Y  +W  AD ++   +I+   L G   YLR VYWA+V  STVGYGDIVP N LET+++ F+ILFGGL++PAVVGGLAA +G+MN A K  ++K+  +R++ +++   + +  +I  YY YLW RQ G++E  I++ L GPLR++V+  V G A+  +PFFA CD+  ++ +VS L PRVFLP DVI + G++GKEM+ IERG+V+V++ D +I F  L  GDYFGE CL+ G   R     ATV ++ YCDCFVL+ + F  V+  Y  PE K++
Sbjct:  211 SQSEFR-DVAVLLILGYIVDLFCAINAILKFNFFMYMEEGLVVFDRECIRRKFRTQHNVFLELFSLLPVDFLAIWFGSRYYNAFRLTKICRLPSVLNYLGRIERLLTESKIGLDQSLRRVINLNFLMIVVCHWVGCAWYIVADIGTEVLSYDESWRDADEQDESLSISHTDLGGFSGYLRSVYWAIVGMSTVGYGDIVPTNALETTFSTFIILFGGLVLPAVVGGLAAYMGSMNIATKFHKRKVAKIRSYLKKQNIEKSILDRILRYYHYLWARQGGVDEQNIMDELPGPLRQRVATFVNGDAISCVPFFALCDNTTRELIVSTLKPRVFLPNDVITQQGELGKEMFFIERGEVVVSSMD-NIPFCTLSRGDYFGESCLI-GATVRV----ATVRALTYCDCFVLSNDDFREVIENYFSPERKNI 628          
BLAST of mRNA_H-akashiwo_Contig1176.5.1 vs. uniprot
Match: A0A7S1FWP3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWP3_9STRA)

HSP 1 Score: 355 bits (910), Expect = 7.390e-106
Identity = 170/409 (41.56%), Postives = 266/409 (65.04%), Query Frame = 1
Query:   43 HIWLLLAPGLLVDLLFLVDLYLQARCFFFLKEGLLVLDKDEVWVKFKAEHNLYLEALAALPWEAVAAGLGARWVHLVRLPKLLRLGKFAAYMGRVQTLMAESEKAISVTTRKFIELNLFMILACHWLGCLWIFCSDLGPHIGYSYTWVIADAENSYNNITPEQLTGLGLYLRGVYWAMVATSTVGYGDIVPQNHLETSYTVFVILFGGLMVPAVVGGLAALIGNMNHAFKEFQKKMQLVRTFTRQKKFPRELRSKIFNYYDYLWTRQAGINEMEILENLSGPLREQVSVCVVGQALKSIPFFADCDDGLQKYMVSVLIPRVFLPKDVIIEAGDIGKEMYVIERGQVMVTNRDKSITFAILEEGDYFGEGCLLQGNMTRCGTLSATVSSIDYCDCFVLTKEGFNGVLVTY 1269
            H   LL  G + D  F+VDL L +R F F++EGL+V D + +  KF+ E N+  E + ALP++ VA  +G R+ + +RL K+ R+G+  + M   + L+  S+ ++     + I+LN  +++ CHW+GCLW F ++L    G S  W+  D  N    I+   L G+  YLR +YWA+VA STVGYGDIVP N LET + + ++LFGGL++PA+VGGLAA +G +N A K+++ K+  +R++ R+      +  K+  +YDYLW+RQ G+NE  I++ LS PLR+QV++ V G ++++I FF  CDDGL++Y+VS L PRVFLP D+I   G++GK+++++ERG ++ ++++  I++    +GDYFGE CL+   +       +TV ++ YCDCFVL+K  F  VL  Y
Sbjct:  579 HDGALLIIGYMFDGFFVVDLILSSRYFTFIEEGLIVFDPERIKQKFRLERNMLRECIVALPFDFVAVFVGERYCNALRLLKVPRVGECISRMNSFEKLLY-SKFSLDQAHLRVIKLNFILLVVCHWVGCLWYFSANLSLSTGISSNWITTDENNDSFTISHSDLKGIAGYLRSIYWAIVAMSTVGYGDIVPTNDLETVFAILIVLFGGLVLPAIVGGLAAYMGTLNQAAKQYKDKLSKIRSYMRRASIEPSVMDKVLQFYDYLWSRQGGVNEEVIMDELSAPLRQQVAIHVNGDSVRNISFFEMCDDGLKQYLVSKLKPRVFLPTDIIYTQGEVGKDLHIVERGLLISSSQNNRISYCNFSKGDYFGENCLIGSTLEL-----STVRAVSYCDCFVLSKSDFIEVLREY 981          
BLAST of mRNA_H-akashiwo_Contig1176.5.1 vs. uniprot
Match: A0A2R5GFT1_9STRA (Cyclic nucleotide-gated cation channel n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFT1_9STRA)

HSP 1 Score: 276 bits (707), Expect = 9.460e-79
Identity = 158/427 (37.00%), Postives = 249/427 (58.31%), Query Frame = 1
Query:   76 VDLLFLVDLYLQARCFFFLKEGLLVLDKDEVWVKFKAEHNLYLEALAALPWEAVAAGLGARWVHLVRLPKLLRLGKFAAYMGRVQTLMAESEKAISVTTRKFIELNLFMILACHWLGCLWIFCSDLGPHIG-------YSYT-----------WVIADAENSYNNITPEQLTGLGLYLRGVYWAMVATSTVGYGDIVPQNHLETSYTVFVILFGGLMVPAVVGGLAALIGNMNHAFKEFQKKMQLVRTFTRQKKFPRELRSKIFNYYDYLWTRQAGINEMEILENLSGPLREQVSVCVVGQALKSIPFFADCDDGLQKYMVSVLIPRVFLPKDVIIEAGDIGKEMYVIERGQVMVTNRDKSITFAILEEGDYFGEGCLLQGNMTRCGTLSATVSSIDYCDCFVLTKEGFNGVLVTYPEYKDMILESL 1302
            +D LF++D+  +AR F F++EG++V D + ++ ++K       + +  +P + +A      W+ ++RL K+LR+    ++    QT MA     +S    + +++  ++I   H +GC W+  S +  H G       ++Y            WV  D  N + NI   Q  G+  YLR +Y+ +V  +TVGYGD+VP N  ET+Y  F+   GGL  PAVVG +AALI +++ A  EFQ K+ ++  +   KKFPR LR +I  YYDYLW+RQ G++E  IL +L   LR +V   + G  +++I F  D D  L ++++SVL P VFLP D II AG++G++M+++E+G   VT+ +  +T+A+L  GDYFGEG LL G   R    +A V +I YCDCFVL KE F+ V   +P+ ++++L  L
Sbjct:  639 LDCLFVIDVVFRARFFGFVQEGVVVRDGERIFQRYKRIEPWITDLIVIMPLDLIAV-YEVTWLPILRLNKILRIEYLMSHYDTAQTYMAARRITLSNGLHRIVKIFFWVIWCVHVVGCGWMVMSLISWHHGGLRKDERHAYLDRSNCAQTDDDWVCKDHAN-WANIDHTQ-PGV-TYLRAIYFVLVDMTTVGYGDLVPYNTRETAYVAFITFIGGLGYPAVVGAMAALISSLDTARTEFQNKLAVLTQYMAVKKFPRPLRVRIMRYYDYLWSRQRGVDEDSILHDLPNSLRMEVQEYINGSIMRNITFLQDVDQELLRHLLSVLQPSVFLPGDFIITAGELGQDMFLLEKGATRVTSANGKLTYAVLTPGDYFGEGSLL-GLEKR----TANVIAIGYCDCFVLNKEDFDRVTREFPQQRELVLMRL 1056          
BLAST of mRNA_H-akashiwo_Contig1176.5.1 vs. uniprot
Match: A0A7S2KN07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KN07_9STRA)

HSP 1 Score: 241 bits (615), Expect = 8.400e-73
Identity = 110/236 (46.61%), Postives = 171/236 (72.46%), Query Frame = 1
Query:  586 STVGYGDIVPQNHLETSYTVFVILFGGLMVPAVVGGLAALIGNMNHAFKEFQKKMQLVRTFTRQKKFPRELRSKIFNYYDYLWTRQAGINEMEILENLSGPLREQVSVCVVGQALKSIPFFADCDDGLQKYMVSVLIPRVFLPKDVIIEAGDIGKEMYVIERGQVMVTNRDKSITFAILEEGDYFGEGCLLQGNMTRCGTLSATVSSIDYCDCFVLTKEGFNGVLVTYPEYKDMIL 1293
            STVGYGDI+P N LET+ + F+ILFGGL++PAVVGGLAA +GN+N   +  ++K+    ++ ++ +  + L  K+  YYDY+W+RQ G+ E  I++ L GPLR++V++ V G+ +++IPFF  CD+ ++++++S+L+P+VFLP DVII  GDIGKEMY+IE G+V+V + D +IT+ +L +GDYFGEGCLL     R G + A    + YCDCFVL+++ F  V+ ++  ++ + L
Sbjct:    2 STVGYGDIIPTNELETTASTFIILFGGLVLPAVVGGLAAYMGNLNKTAQSQKRKVAKAMSYMQKHRMDKVLVDKVIRYYDYIWSRQGGVEEQAIMDELPGPLRQRVAMFVNGKDIEAIPFFTPCDEAVKEHILSMLVPKVFLPNDVIICNGDIGKEMYLIENGRVVVCSSDLNITYCVLTKGDYFGEGCLLSARSVRLGNVHA----LTYCDCFVLSRDDFISVMSSFVAHRRIAL 233          
BLAST of mRNA_H-akashiwo_Contig1176.5.1 vs. uniprot
Match: K0R4S7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4S7_THAOC)

HSP 1 Score: 246 bits (627), Expect = 3.960e-68
Identity = 137/404 (33.91%), Postives = 217/404 (53.71%), Query Frame = 1
Query:   52 LLLAPGLLVDLLFLVDLYLQARCFFFLKEGLLVLDKDEVWVKFKAEHNLYLEALAALPWEAVAAGLGARWVHLVRLPKLLRLGKFAAYMGRVQTLMAESEKAISVTTRKFIELNLFMILACHWLGCLWIFCSDLGPHIGYSYTWVIADAENSYNNITPEQLTGLGLYLRGVYWAMVATSTVGYGDIVPQNHLETSYTVFVILFGGLMVPAVVGGLAALIGNMNHAFKEFQKKMQLVRTFTRQKKFPRELRSKIFNYYDYLWTRQAGINEMEILENLSGPLREQVSVCVVGQALKSIPFFADCDDGLQKYMVSVLIPRVFLPKDVIIEAGDIGKEMYVIERGQVMVTNRDKSITFAILEEGDYFGEGCLLQGNMTRCGTLSATVSSIDYCDCFVLTKEGFNGVLV 1263
            +LL+ G  VD  F+VD  L    FF +++GL+V D   +   F  ++ L +E +   P++ ++A  G R+ H  R+ KLL++    +Y+  V  +++E +  + +   +  +LN+ ++  CH +GCLW   + +   +G+S  W  AD  +    ++     G   YLR VYWA+V  STVGYGDIVP N LET++  F ILFGGL++PAVVGGLAA I   +                         L +K+F        R  G+ E +++  L   +R  VS  + G AL ++PF + CD+   + +  +L PR+FLP D++++ G+ G EMY+I+ G V VT    S    IL  GD+ GEG LL  +++      ATV++  YC+ F L+ E F+  L+
Sbjct:  527 VLLSSGYFVDAFFVVDAILSWNYFFVMEDGLVVSDNVHIRQHFYKQNILPVEIVRLAPFDIISAFFGGRFCHFFRMIKLLQVPTLLSYIESVDVMLSELKVVVDLALYRVFKLNVLLLCICHVVGCLWFMTASVSREVGFSMDWRRADESDELLFVSHHDFGGFAAYLRSVYWAIVGMSTVGYGDIVPTNLLETTFATFTILFGGLVIPAVVGGLAAYISTFH-------------------------LTAKMF--------RHGGVVEGDVMAELPVTVRSTVSSHINGAALHALPFLSRCDETTLQALCLLLQPRIFLPSDIVLKEGEQGFEMYLIKHGTVTVTTTSVSGVLRILSSGDFVGEGSLLGSSLSE-----ATVTAQTYCEFFSLSHEDFDDALL 892          
BLAST of mRNA_H-akashiwo_Contig1176.5.1 vs. uniprot
Match: A0A7S2MKU8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MKU8_9STRA)

HSP 1 Score: 214 bits (545), Expect = 2.710e-57
Identity = 118/318 (37.11%), Postives = 174/318 (54.72%), Query Frame = 1
Query:  400 MILACHWLGCLWIF-------------CSDLGPHIGYSYTWVIADAENSYNNITPEQLTGLG----LYLRGVYWAMVATSTVGYGDIVPQNHLETSYTVFVILFGGLMVPAVVGGLAALIGNMNHAFKEFQKKMQLVRTFTRQKKFPRELRSKIFNYYDYLWTRQAGINEMEILENLSGPLREQVSVCVVGQALKSIPFFADCDDGLQKYMVSVLIPRVFLPKDVIIEAGDIGKEMYVIERGQVMVTNRDKSITFAILEEGDYFGEGCLLQGNMTRCGTLSATVSSIDYCDCFVLTKEGFNGVLVTYPEYKDMILESL 1302
            M + CHW+GCL+IF              +D         +W+  D  N   + + E L   G    +YLR VYWA+ A STVGYGDIVP +  E ++   VILFGGL VPA+VGGLA+ + + N    +++ ++++V    +++K   E + K+  +YDY+W RQ G++E  IL  L  PLR+ +   V   +L  IPF    +D + K ++SV  PR+F P DVII AG  G  +Y+IERG V V +     T+  L  GDY GE CLL      C T    V  + +CDCF L +  F  V+  +P+ + +I++ +
Sbjct:    1 MFIVCHWVGCLFIFFGRFSEQNCEQSSAADESSESTLRCSWLKVDGLNDDLDYSDEDLNSSGVTAKIYLRAVYWALCAMSTVGYGDIVPVSDAEIAFASVVILFGGLAVPAMVGGLASCVTSFNQPAIQYRSELKVVWNLMKKRKCTDEQKQKVLRFYDYIWCRQGGVDETSILAELPNPLRKMLLDHVFHDSLTKIPFLQGVNDAVMKSIISVTHPRIFTPDDVIINAGVNGGCVYLIERGIVAVVSVHFDQTYTYLSGGDYVGESCLLYS--VPCTT---NVKCVTFCDCFQLNRTAFIKVMTLFPDEERVIIQKV 313          
BLAST of mRNA_H-akashiwo_Contig1176.5.1 vs. uniprot
Match: A0A482SXI7_9ARCH (Cyclic nucleotide-binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXI7_9ARCH)

HSP 1 Score: 206 bits (524), Expect = 1.520e-56
Identity = 113/345 (32.75%), Postives = 186/345 (53.91%), Query Frame = 1
Query:   52 LLLAPGLLVDLLFLVDLYLQARCFFFLKEGLLVLDKDEVWVKFKAEHNLYLEALAALPWE-AVAAGLGARWVHLVRLPKLLRLGKFAAYMGR-VQTLMAESEKAISVTTRKFIELNLFMILACHWLGCLWIFCSDLGPHI-GYSYTWVIADAEN-SYNNITPEQLTGLGLYLRGVYWAMVATSTVGYGDIVPQNHLETSYTVFVILFGGLMVPAVVGGLAALIGNMNHAFKEFQKKMQLVRTFTRQKKFPRELRSKIFNYYDYLWTRQAGINEMEILENLSGPLREQVSVCVVGQALKSIPFFADCDDGLQKYMVSVLIPRVFLPKDVIIEAGDIGKEMYVIERG 1074
            ++L  G L D LF+VD  LQ   F + ++G++ LD+ +VW  F  ++   L  L   P + A+       +  + RL KLL   + + +  + +QT ++ +   +S    +FI L   +   CHW GC W   +D+G  +  Y  TW+  D     Y ++   +      Y R +YWA  A S++GY DI+P+NH+E +  + +I FG  M    +G +  L  + N   +EF  K++ +R   +  K P  + +++ NY+D+LW R  G+NE E+L +L   LR  V   V+G  L SIPFFA C + ++  ++S++  R FL  D ++ AG++GKEM+VIE G
Sbjct:  197 VILCFGFLTDALFIVDFLLQCAIFGYWQDGVVCLDRSKVWKHFWTQNPPLLIFLEVFPLDLALGLSCSMEFYCIFRLLKLLHSRRLSYFAEKFLQTFVSYTGIGVSFEMSRFIALYFMLFQICHWAGCTWRLVADVGTQVFHYEVTWLSVDKHALDYKSMAVVE------YARSLYWAASALSSIGYPDILPRNHVEVAVIIVIIFFGYFMFNTCLGAIGNLFSSFNREKREFTMKVERIRQVLKHNKIPSSIETRVINYFDHLWARYNGVNEEELLNDLPPTLRGAVVRFVIGPLLTSIPFFAHCSEPMENLLLSMVESRCFLDGDPLMVAGELGKEMFVIEVG 535          
BLAST of mRNA_H-akashiwo_Contig1176.5.1 vs. uniprot
Match: A0A212KX46_9CHLA (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Chlamydiales bacterium SCGC AG-110-M15 TaxID=1871324 RepID=A0A212KX46_9CHLA)

HSP 1 Score: 199 bits (505), Expect = 3.690e-55
Identity = 119/422 (28.20%), Postives = 218/422 (51.66%), Query Frame = 1
Query:   64 PGLLVDLLFLVDLYLQARCFF-----FLKEGLLVLDKDEVWVKFKAEHNLYLEALAALPWEAVAAGLGARW------VHLVRLPKLLRLGKFAAYMGRVQTLMAESEKAISVTTRKFIELNLFMILACHWLGCLWIFCSDLGPHIGYSYTWVIADAENSYNNITPEQLTGLGLYLRGVYWAMVATSTVGYGDIVPQNHLETSYTVFVILFGGLMVPAVVGGLAALIGNMNHAFKEFQKKMQLVRTFTRQKKFPRELRSKIFNYYDYLWTRQAGINEMEILENLSGPLREQVSVCVVGQALKSIPFFADCDDGLQKYMVSVLIPRVFLPKDVIIEAGDIGKEMYVIERGQVMVTNRDKSITFAILEEGDYFGEGCLLQGNMTRCGTLSATVSSIDYCDCFVLTKEGFNGVLVTYPEYKDMILE 1296
            P  ++ + F+ DL L     F     ++ EGLLV +   V + +     ++ + +A+LP++A+A  +G         +  +RLP+L+RL +   Y         E    ++ +  + ++L   +I++ H++ C W     +    G S  W+  + +N     T +Q      Y+  +YWA+V  +TVG+GDI P    E  +T+  +  G  +   ++G +A+L+ N++   + +++KM  +  + R ++ P EL+ +I  YYDY+W+R  G++E+ +L +L  PL  ++ + +  + L+ +P F + D      +V +L P    P D II  G+IG+EMY I RG V V + D    +A L +G +FGE  LL          +A++ +  YCD F++ K+ F+ VL  YPE+   +L+
Sbjct:   41 PSYIITINFIADLILVTDIVFNFFTGYISEGLLVQNLKCVRINYLKTWFIF-DFIASLPFDALALFIGIEHFGGIAAIPFLRLPRLMRLIRVKPYFRHW-----EKNLQVNPSILRLVKLGASVIISAHFIACSWFGIGVIEAQTGQS--WL--NTQNLLEASTYDQ------YVHSLYWALVTMTTVGFGDITPTTSTEILFTMIAMCIGVSIYAYIIGNMASLVANIDAVAQAYRQKMDSINNYMRLREIPVELQKRIRRYYDYVWSRNKGLSEVNLLSDLPAPLYTELKLFLHREVLQKVPLFHEADSVFLSALVKILQPVSSAPGDFIINEGEIGREMYFISRGNVEVLSGDGKTIYAELSDGAFFGEIALLFSEKR-----TASIQAKSYCDLFIMKKDDFDVVLKDYPEFASKMLQ 441          
BLAST of mRNA_H-akashiwo_Contig1176.5.1 vs. uniprot
Match: A0A482SK96_9ARCH (Cyclic nucleotide-binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SK96_9ARCH)

HSP 1 Score: 199 bits (507), Expect = 2.100e-54
Identity = 111/347 (31.99%), Postives = 185/347 (53.31%), Query Frame = 1
Query:   43 HIWLLLAPGLLVDLLFLVDLYLQARCFFFLKEGLLVLDKDEVWVKFKAEHNLYLEALAALPWEAVAA-GLGARWVHLVRLPKLLRLGKFAAYMGR-VQTLMAESEKAISVTTRKFIELNLFMILACHWLGCLWIFCSDLGPHI-GYSYTWVIADAENSYNNITPEQLTGLGL--YLRGVYWAMVATSTVGYGDIVPQNHLETSYTVFVILFGGLMVPAVVGGLAALIGNMNHAFKEFQKKMQLVRTFTRQKKFPRELRSKIFNYYDYLWTRQAGINEMEILENLSGPLREQVSVCVVGQALKSIPFFADCDDGLQKYMVSVLIPRVFLPKDVIIEAGDIGKEMYVIE 1068
             + ++L  G L D+LFLVD+ L    F + +EG++  +++++W  F   ++     L   P++ +   G   R   + RL KLL+  +FAA   R V    + +  A+S    +F+ L   +   CHW GC+W   +D+   I  Y  TWV  D     N +     T + +  Y R +YWA    S++G+ DI+ +N++E    + VI FG LM    +G +  L+ + N   +EF+ K++ +R   R  K    +  +  +Y+D+LWTR  G+NE E+L  L   LR  V  CV+G  L SI FF +C + ++  ++S++  R FL  D ++ AG++GKEM++IE
Sbjct:  202 RVLVMLCFGFLADMLFLVDVVLHCTIFAYWEEGIICSEQNKIWTHFWTRNSPLYIFLELFPFDIIIGFGYDIRLYCIFRLLKLLQSVRFAALADRFVHAFTSFTGVAVSFEKSRFVMLYFMLFQVCHWGGCVWRLAADVAEQIFHYEVTWVSVDR----NGLLHADYTAMPVTEYTRSIYWAASVMSSIGFPDILARNNVEVCVVIVVIFFGYLMFNTCLGAIGNLVSSFNREEREFKMKVERIRQVLRHNKISSSVEMRAMHYFDHLWTRYNGMNEEEVLSYLPPTLRGAVVRCVIGPLLTSISFFKNCSEPMENLLLSMVEARCFLDGDTLMIAGELGKEMFIIE 544          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1176.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V2CUB4_9STRA1.220e-10842.82Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6V2CY10_9STRA1.010e-10742.82Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S1FWP3_9STRA7.390e-10641.56Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A2R5GFT1_9STRA9.460e-7937.00Cyclic nucleotide-gated cation channel n=1 Tax=Hon... [more]
A0A7S2KN07_9STRA8.400e-7346.61Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
K0R4S7_THAOC3.960e-6833.91Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2MKU8_9STRA2.710e-5737.11Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A482SXI7_9ARCH1.520e-5632.75Cyclic nucleotide-binding domain-containing protei... [more]
A0A212KX46_9CHLA3.690e-5528.20Cyclic nucleotide-binding domain-containing protei... [more]
A0A482SK96_9ARCH2.100e-5431.99Cyclic nucleotide-binding domain-containing protei... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1176contigH-akashiwo_Contig1176:336861..338362 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog159749.K0R4S7
PFAMsIon_trans,Ion_trans_2,cNMP_binding
Model size1329
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.49e-69
EggNOG OGsCOG2202@1|root,KOG0498@1|root,KOG0499@1|root,KOG0498@2759|Eukaryota,KOG0499@2759|Eukaryota,KOG0501@2759|Eukaryota
Descriptionphosphorelay sensor kinase activity
Cds size1329
COG categoryT
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387106.6059813-CDS-H-akashiwo_Contig1176:336860..3380471681387106.6059813-CDS-H-akashiwo_Contig1176:336860..338047Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1176 336861..338047 +
1681387106.6152663-CDS-H-akashiwo_Contig1176:338220..3383621681387106.6152663-CDS-H-akashiwo_Contig1176:338220..338362Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1176 338221..338362 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1176.5.1prot_H-akashiwo_Contig1176.5.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1176 336861..338362 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1176.5.1

>prot_H-akashiwo_Contig1176.5.1 ID=prot_H-akashiwo_Contig1176.5.1|Name=mRNA_H-akashiwo_Contig1176.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=443bp
ADAAGDPSQASWKGHIWLLLAPGLLVDLLFLVDLYLQARCFFFLKEGLLV
LDKDEVWVKFKAEHNLYLEALAALPWEAVAAGLGARWVHLVRLPKLLRLG
KFAAYMGRVQTLMAESEKAISVTTRKFIELNLFMILACHWLGCLWIFCSD
LGPHIGYSYTWVIADAENSYNNITPEQLTGLGLYLRGVYWAMVATSTVGY
GDIVPQNHLETSYTVFVILFGGLMVPAVVGGLAALIGNMNHAFKEFQKKM
QLVRTFTRQKKFPRELRSKIFNYYDYLWTRQAGINEMEILENLSGPLREQ
VSVCVVGQALKSIPFFADCDDGLQKYMVSVLIPRVFLPKDVIIEAGDIGK
EMYVIERGQVMVTNRDKSITFAILEEGDYFGEGCLLQGNMTRCGTLSATV
SSIDYCDCFVLTKEGFNGVLVTYPEYKDMILESLTQVGHCKV*
back to top

mRNA from alignment at H-akashiwo_Contig1176:336861..338362+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1176.5.1 ID=mRNA_H-akashiwo_Contig1176.5.1|Name=mRNA_H-akashiwo_Contig1176.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1502bp|location=Sequence derived from alignment at H-akashiwo_Contig1176:336861..338362+ (Heterosigma akashiwo CCMP452)
GCTGATGCCGCTGGCGACCCCAGCCAGGCCAGCTGGAAAGGGCACATCTG GCTGTTACTTGCGCCGGGGCTGTTGGTTGATTTGCTGTTCCTGGTGGACC TGTACCTCCAGGCGCGGTGCTTCTTCTTCCTGAAGGAGGGCCTGCTGGTG CTGGACAAGGACGAGGTGTGGGTGAAGTTCAAGGCGGAGCACAACCTGTA CCTGGAGGCACTGGCGGCTTTGCCGTGGGAGGCCGTGGCCGCGGGCCTAG GCGCGCGCTGGGTGCACCTCGTGCGGCTGCCCAAGCTGCTGCGCCTGGGG AAGTTCGCGGCGTACATGGGCCGGGTGCAGACCCTCATGGCCGAGAGCGA GAAGGCCATCAGCGTCACCACCCGCAAGTTCATCGAGCTCAACCTCTTCA TGATTCTGGCCTGCCACTGGCTGGGGTGCCTCTGGATCTTCTGCTCGGAC CTCGGGCCTCACATAGGCTACAGCTACACCTGGGTGATAGCGGATGCTGA GAATTCCTACAACAATATCACCCCAGAGCAGCTGACGGGGTTGGGGTTGT ATCTGCGTGGTGTGTACTGGGCCATGGTCGCCACCTCCACGGTGGGCTAC GGGGACATTGTTCCCCAGAATCATCTGGAAACCTCTTACACTGTCTTTGT TATCCTTTTTGGTGGCTTGATGGTGCCAGCGGTGGTGGGCGGCTTGGCTG CCCTCATTGGGAACATGAACCATGCTTTCAAGGAGTTCCAGAAAAAGATG CAGCTTGTCCGCACCTTCACTCGCCAGAAGAAATTTCCCCGAGAACTTCG GTCCAAGATTTTCAACTACTATGACTATTTGTGGACCCGCCAAGCTGGTA TCAATGAGATGGAAATCCTGGAAAACCTTAGTGGCCCCCTGCGCGAGCAA GTCAGCGTTTGTGTAGTGGGCCAGGCCTTGAAATCCATCCCCTTCTTTGC TGATTGTGACGATGGGTTGCAAAAGTACATGGTCTCTGTCCTGATACCAA GGGTGTTCCTGCCCAAAGATGTCATCATAGAGGCAGGGGATATTGGCAAG GAGATGTATGTGATAGAGCGTGGACAAGTGATGGTGACAAACCGGGACAA AAGCATCACGTTTGCCATTCTGGAGGAAGGAGACTACTTTGGGGAGGGCT GCTTACTGCAGGGAAACATGACCAGGTGTGGCACTCTGTCCTCTATGATG TCTTGCTTCTTCTACTTTTGTGGTGCATCGCAGTACTGGACATTAGGGTC CCCACTACCAAATTAAAAAAAGGGTGATGAGTGTTTGTAAATTATTTGGT CTATTATTCTGTCTTTGGTTTCCCTCTTCTACGGTCCTTTCTTGTCCCAA CATATTCTAGGTCTGCTACGGTTTCTTCTATTGACTACTGTGACTGTTTT GTTTTGACAAAAGAGGGGTTCAACGGTGTTTTGGTCACCTACCCTGAGTA CAAAGATATGATACTGGAATCTTTGACCCAGGTTGGTCACTGTAAAGTAT GA
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig1176:336861..338362+

>mRNA_H-akashiwo_Contig1176.5.1 ID=mRNA_H-akashiwo_Contig1176.5.1|Name=mRNA_H-akashiwo_Contig1176.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1329bp|location=Sequence derived from alignment at H-akashiwo_Contig1176:336861..338362+ (Heterosigma akashiwo CCMP452)
GCTGATGCCGCTGGCGACCCCAGCCAGGCCAGCTGGAAAGGGCACATCTG
GCTGTTACTTGCGCCGGGGCTGTTGGTTGATTTGCTGTTCCTGGTGGACC
TGTACCTCCAGGCGCGGTGCTTCTTCTTCCTGAAGGAGGGCCTGCTGGTG
CTGGACAAGGACGAGGTGTGGGTGAAGTTCAAGGCGGAGCACAACCTGTA
CCTGGAGGCACTGGCGGCTTTGCCGTGGGAGGCCGTGGCCGCGGGCCTAG
GCGCGCGCTGGGTGCACCTCGTGCGGCTGCCCAAGCTGCTGCGCCTGGGG
AAGTTCGCGGCGTACATGGGCCGGGTGCAGACCCTCATGGCCGAGAGCGA
GAAGGCCATCAGCGTCACCACCCGCAAGTTCATCGAGCTCAACCTCTTCA
TGATTCTGGCCTGCCACTGGCTGGGGTGCCTCTGGATCTTCTGCTCGGAC
CTCGGGCCTCACATAGGCTACAGCTACACCTGGGTGATAGCGGATGCTGA
GAATTCCTACAACAATATCACCCCAGAGCAGCTGACGGGGTTGGGGTTGT
ATCTGCGTGGTGTGTACTGGGCCATGGTCGCCACCTCCACGGTGGGCTAC
GGGGACATTGTTCCCCAGAATCATCTGGAAACCTCTTACACTGTCTTTGT
TATCCTTTTTGGTGGCTTGATGGTGCCAGCGGTGGTGGGCGGCTTGGCTG
CCCTCATTGGGAACATGAACCATGCTTTCAAGGAGTTCCAGAAAAAGATG
CAGCTTGTCCGCACCTTCACTCGCCAGAAGAAATTTCCCCGAGAACTTCG
GTCCAAGATTTTCAACTACTATGACTATTTGTGGACCCGCCAAGCTGGTA
TCAATGAGATGGAAATCCTGGAAAACCTTAGTGGCCCCCTGCGCGAGCAA
GTCAGCGTTTGTGTAGTGGGCCAGGCCTTGAAATCCATCCCCTTCTTTGC
TGATTGTGACGATGGGTTGCAAAAGTACATGGTCTCTGTCCTGATACCAA
GGGTGTTCCTGCCCAAAGATGTCATCATAGAGGCAGGGGATATTGGCAAG
GAGATGTATGTGATAGAGCGTGGACAAGTGATGGTGACAAACCGGGACAA
AAGCATCACGTTTGCCATTCTGGAGGAAGGAGACTACTTTGGGGAGGGCT
GCTTACTGCAGGGAAACATGACCAGGTGTGGCACTCTGTCTGCTACGGTT
TCTTCTATTGACTACTGTGACTGTTTTGTTTTGACAAAAGAGGGGTTCAA
CGGTGTTTTGGTCACCTACCCTGAGTACAAAGATATGATACTGGAATCTT
TGACCCAGGTTGGTCACTGTAAAGTATGA
back to top