mRNA_H-akashiwo_Contig1173.7.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1173.7.1 vs. uniprot
Match: A0A7S3XZR8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZR8_HETAK) HSP 1 Score: 335 bits (859), Expect = 5.230e-107 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1
Query: 1 MEELCDTSYGLGWLAALYFVVFVVLGALVLLTLFLGVVTTSMEKATAAMKEGQKLQLEVDKVVARYGLAPRGVELFRAAFDTIDLDEGGSLDFEELLPVLMIVGRDLSDEQVVDLYLDTDEDGSGDVDFAEFLEMMVQAKGLITGVPIEPREQEGSKRSSGSDGDSVSHRSSKPLLDAG 537
MEELCDTSYGLGWLAALYFVVFVVLGALVLLTLFLGVVTTSMEKATAAMKEGQKLQLEVDKVVARYGLAPRGVELFRAAFDTIDLDEGGSLDFEELLPVLMIVGRDLSDEQVVDLYLDTDEDGSGDVDFAEFLEMMVQAKGLITGVPIEPREQEGSKRSSGSDGDSVSHRSSKPLLDAG
Sbjct: 587 MEELCDTSYGLGWLAALYFVVFVVLGALVLLTLFLGVVTTSMEKATAAMKEGQKLQLEVDKVVARYGLAPRGVELFRAAFDTIDLDEGGSLDFEELLPVLMIVGRDLSDEQVVDLYLDTDEDGSGDVDFAEFLEMMVQAKGLITGVPIEPREQEGSKRSSGSDGDSVSHRSSKPLLDAG 765
BLAST of mRNA_H-akashiwo_Contig1173.7.1 vs. uniprot
Match: A0A2R5G834_9STRA (Voltage-dependent L-type calcium channel subunit alpha-1C n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G834_9STRA) HSP 1 Score: 113 bits (283), Expect = 9.400e-26 Identity = 63/137 (45.99%), Postives = 87/137 (63.50%), Query Frame = 1
Query: 1 MEELCDTSYGLGWLAALYFVVFVVLGALVLLTLFLGVVTTSMEKATAAMKEGQKLQLEVDKVVARYGLAPRGVELFRAAFDTIDLDEGGSLDFEELLPVLMIVGRDLSDEQVVDLYLDTDEDGSGDVDFAEFLEMMV 411
MEELC + LG +AALY+++F ++G LVL+TLF+GVVT SME+A+A E + + DK+ LA V LF F TID D GGS+D EEL + +G + Q+ +L D+D SG++DFAEF+E MV
Sbjct: 738 MEELCTSPQALGVVAALYYILFTLIGGLVLMTLFIGVVTMSMEEASANQDEVKAVMKRADKIAEENDLAKETVSLFHDIFSTIDYDGGGSIDEEELAIGFIAIGDVFTKAQIRELVAQVDDDNSGELDFAEFIEFMV 874
BLAST of mRNA_H-akashiwo_Contig1173.7.1 vs. uniprot
Match: A0A7S2C5J9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5J9_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.490e-25 Identity = 59/143 (41.26%), Postives = 95/143 (66.43%), Query Frame = 1
Query: 1 MEELCDTSYGLGW---LAALYFVVFVVLGALVLLTLFLGVVTTSMEKATAAMKEGQKLQLEVDKVVARYGLAPRGVELFRAAFDTIDLDEGGSLDFEELLPVLMIVGRDLSDEQVVDLYLDTDEDGSGDVDFAEFLEMMVQAK 420
+ E+C G+ L +YF++FV +GALVLLTLF+GVVTTSME+AT MK +++ V ++ + +A V+++R F +DLD+GG+++ +EL+ L GR ++E++ + + DEDGSG++DFAEFL M++ K
Sbjct: 299 IAEMCTKKGPDGFGQLLVVIYFLIFVTIGALVLLTLFIGVVTTSMEEATQDMKAALEVEKMVGDIMVEHSMAKEMVDIYRVVFSMLDLDDGGTIEEQELIIGLKSTGRHFNEEEMTRKFSEVDEDGSGEIDFAEFLMFMIKVK 441
BLAST of mRNA_H-akashiwo_Contig1173.7.1 vs. uniprot
Match: A0A7S1XQD9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQD9_9STRA) HSP 1 Score: 107 bits (268), Expect = 9.490e-24 Identity = 60/137 (43.80%), Postives = 93/137 (67.88%), Query Frame = 1
Query: 13 CDTSYGLGWLAALYFVVFVVLGALVLLTLFLGVVTTSMEKATAAMKEGQKLQLEVDKVVARY-GLAPRGVELFRAAFDTIDLDEGGSLDFEELLPVLMIVGRDLSDEQVVDLYLDTDEDGSGDVDFAEFLEMMVQAK 420
C + + ++F++F+VLGALVLLTLF+GVVTTSME+AT MK Q ++ V +++ ++ G+ P V+++R AF +DLD GGS++ +EL L +G++++ E + L DED SG++DFAEFLE M+ K
Sbjct: 636 CTNPQKRPFFSVVFFLIFIVLGALVLLTLFVGVVTTSMEEATENMKVVQAVEKRVREIMTKHKGMTPALVDVYRKAFSVLDLDGGGSVERDELEYGLKAIGKEVNKEDMDVLLSQVDEDDSGEIDFAEFLEFMILTK 772
BLAST of mRNA_H-akashiwo_Contig1173.7.1 vs. uniprot
Match: A0A7S2CRH4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CRH4_9STRA) HSP 1 Score: 103 bits (258), Expect = 5.870e-23 Identity = 60/143 (41.96%), Postives = 90/143 (62.94%), Query Frame = 1
Query: 1 MEELCDTSYG---LGWLAALYFVVFVVLGALVLLTLFLGVVTTSMEKATAAMKEGQKLQLEVDKVVARYGLAPRGVELFRAAFDTIDLDEGGSLDFEELLPVLMIVGRDLSDEQVVDLYLDTDEDGSGDVDFAEFLEMMVQAK 420
M ++C+ + G +GW AA+YF+VFV+LG LVLLTLF+GVVTTSME+AT + ++ + ++ + + P V + F +DLD GG+++ EEL L +G++LS EQ+ + DE G G +D AEF+E MV K
Sbjct: 98 MIKMCEKNGGAHPMGWAAAIYFIVFVLLGGLVLLTLFIGVVTTSMEEATDRANKEKETEDKIIAFALKEKIDPNLVMNLKKVFHKLDLDGGGTIEEEELKIGLRAIGKELSPEQLTKIMAKVDESGDGCIDMAEFIEFMVLIK 240
BLAST of mRNA_H-akashiwo_Contig1173.7.1 vs. uniprot
Match: A0A662XKF3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XKF3_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.840e-21 Identity = 57/133 (42.86%), Postives = 88/133 (66.17%), Query Frame = 1
Query: 22 SYGLGWLAALYFVVFVVLGALVLLTLFLGVVTTSMEKATAAMKEGQKLQLEVDKVVARYGLAPRGVELFRAAFDTIDLDEGGSLDFEELLPVLMIVGRDLSDEQVVDLYLDTDEDGSGDVDFAEFLEMMVQAK 420
S+G G++A LYFV F+VLGA+VL+TLF+GVVTTSME+AT M+ ++L V+ + A+ G+ + V + F +DLD GS++ EL L +G++ S E++ ++ DEDGSG +D EF+E M+ +
Sbjct: 714 SHGSGFVAVLYFVTFIVLGAMVLITLFIGVVTTSMEEATQEMEAEKELLRRVEALRAQRGVDIKVVNSYMQVFRMLDLDGSGSVEEAELRTGLAAIGKNPSYEELKEMMDTVDEDGSGQIDIVEFVEFMIHVR 846
BLAST of mRNA_H-akashiwo_Contig1173.7.1 vs. uniprot
Match: A0A2R5G901_9STRA (Voltage-dependent L-type calcium channel subunit alpha-1F n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G901_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 5.410e-20 Identity = 54/137 (39.42%), Postives = 88/137 (64.23%), Query Frame = 1
Query: 1 MEELCDTSYGLGWLAALYFVVFVVLGALVLLTLFLGVVTTSMEKATAAMKEGQKLQLEVDKVVARYGLAPRGVELFRAAFDTIDLDEGGSLDFEELLPVLMIVGRDLSDEQVVDLYLDTDEDGSGDVDFAEFLEMMV 411
+E +C Y +AA+YFV FV++GALVL+TLF+GVVTTSME+AT A + Q+ +V + R+ ++ ++ ++ FD +DLD G+++ EEL L +GR + E + + DED SG++DF EF ++++
Sbjct: 775 IESMCTEPYAFYIVAAIYFVFFVLVGALVLMTLFIGVVTTSMEEATEAQGKQQEFNNKVQALRERHNISESSIKAYQRVFDMLDLDGSGTIEEEELRFGLKSIGRCPAKEDLDRMIKLVDEDKSGEIDFIEFCKLLM 911
BLAST of mRNA_H-akashiwo_Contig1173.7.1 vs. uniprot
Match: H3GSJ4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSJ4_PHYRM) HSP 1 Score: 95.9 bits (237), Expect = 1.370e-19 Identity = 55/136 (40.44%), Postives = 86/136 (63.24%), Query Frame = 1
Query: 13 CDTSYGLGWLAALYFVVFVVLGALVLLTLFLGVVTTSMEKATAAMKEGQKLQLEVDKVVARYGLAPRGVELFRAAFDTIDLDEGGSLDFEELLPVLMIVGRDLSDEQVVDLYLDTDEDGSGDVDFAEFLEMMVQAK 420
C+ G G+LA LYF F+VLG +VL+TLF+GVVTTSM++AT M+ ++L V+ + ++ + P+ V + F +DLDE GS++ EL L +G+ S E++ ++ DEDGSG +D EF+E M+ +
Sbjct: 691 CENQPG-GYLAVLYFCSFIVLGGMVLITLFIGVVTTSMDEATQEMEAEKELIRRVEALREQHDIDPKVVASYMQVFRMLDLDESGSVEEAELRTGLAAIGKYPSYEELKEMMDIVDEDGSGQIDIVEFVEFMIHVR 825
BLAST of mRNA_H-akashiwo_Contig1173.7.1 vs. uniprot
Match: K3X084_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X084_GLOUD) HSP 1 Score: 95.5 bits (236), Expect = 1.870e-19 Identity = 55/134 (41.04%), Postives = 84/134 (62.69%), Query Frame = 1
Query: 19 TSYGLGWLAALYFVVFVVLGALVLLTLFLGVVTTSMEKATAAMKEGQKLQLEVDKVVARYGLAPRGVELFRAAFDTIDLDEGGSLDFEELLPVLMIVGRDLSDEQVVDLYLDTDEDGSGDVDFAEFLEMMVQAK 420
T + G+LA YF F+VLGA+VL+TLF+GVVTTSME+AT M+ ++L V+++ R G+ V + F +DLD GS++ EL L +G++ S E++ ++ DEDGSG +D EF+E M+ +
Sbjct: 667 TPHASGFLAVAYFGAFIVLGAMVLITLFVGVVTTSMEEATQEMEAEKELLRRVEQLRVRKGVEQSVVSSYMQVFHMLDLDNSGSVEEAELRIGLAAIGKNPSYEELKEMMDVVDEDGSGQIDIVEFVEFMIHVR 800
BLAST of mRNA_H-akashiwo_Contig1173.7.1 vs. uniprot
Match: A0A6A4FJK2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FJK2_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.200e-18 Identity = 53/129 (41.09%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 34 GWLAALYFVVFVVLGALVLLTLFLGVVTTSMEKATAAMKEGQKLQLEVDKVVARYGLAPRGVELFRAAFDTIDLDEGGSLDFEELLPVLMIVGRDLSDEQVVDLYLDTDEDGSGDVDFAEFLEMMVQAK 420
G+LA LYF F+VLGA+VL+TLF+GVVTTSME+AT M+ ++L V+ + ++G+ V + F +DLD GS++ EL L +G+ + E++ ++ DEDGSG +D EF+E M+ +
Sbjct: 699 GFLAVLYFCSFIVLGAMVLITLFIGVVTTSMEEATQEMEAEKELLRRVEALREQHGIESNVVTSYMQVFRMLDLDGSGSVEEAELRTGLAAIGKYPTYEELKEMMDVVDEDGSGQIDIVEFVEFMIHVR 827 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1173.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1173.7.1 >prot_H-akashiwo_Contig1173.7.1 ID=prot_H-akashiwo_Contig1173.7.1|Name=mRNA_H-akashiwo_Contig1173.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=189bp MEELCDTSYGLGWLAALYFVVFVVLGALVLLTLFLGVVTTSMEKATAAMKback to top mRNA from alignment at H-akashiwo_Contig1173:111665..114651- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1173.7.1 ID=mRNA_H-akashiwo_Contig1173.7.1|Name=mRNA_H-akashiwo_Contig1173.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2987bp|location=Sequence derived from alignment at H-akashiwo_Contig1173:111665..114651- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1173:111665..114651- >mRNA_H-akashiwo_Contig1173.7.1 ID=mRNA_H-akashiwo_Contig1173.7.1|Name=mRNA_H-akashiwo_Contig1173.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=567bp|location=Sequence derived from alignment at H-akashiwo_Contig1173:111665..114651- (Heterosigma akashiwo CCMP452)back to top |