mRNA_H-akashiwo_Contig117.4.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig117.4.1 vs. uniprot
Match: A0A836CM26_9STRA (PUA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM26_9STRA) HSP 1 Score: 213 bits (542), Expect = 1.100e-63 Identity = 125/248 (50.40%), Postives = 157/248 (63.31%), Query Frame = 3
Query: 249 KVEYFDPSIPLDPIEASKSTVREMPIFPLNMVAVPTGKCPLHIFEMRYRQMMNKIQETDERFGIIMVDSRNNALASVGTTVQVYQRSLLDDGRQLIMNYGVGRFKILKIISNEPYMVALVDTDYEDIMKHSPELAKL-------EQQVWETLNEVVRLTNKIQDKQSVTVSGEATRYRPTDEPSSDQKQEDK-RRSNFSFALANMLDLPPEQKQLMVQTLDVRQRLQFQYDLLYETLKMLAAQSSLKD 968
+V YF P D T RE+PIFPL++V P GKCPLHIFEMRYRQ+MN I D RFGIIM D +A VGT V+V +RSLL DGRQL+MN G RFK+L++ +PYMV LV+ D PE +L E +VW L EVVRL+NK+ DK VTVS + R P QE++ RRS FSFA+ MLD+PP KQLM+QTL++ +RL +Q +LL + K LAAQ++LKD
Sbjct: 54 QVSYFTPLSREDTPSPGAKT-RELPIFPLSLVTCPNGKCPLHIFEMRYRQLMNNIAGQDNRFGIIMFDPNTQQIAGVGTVVEVVERSLLPDGRQLVMNIGRERFKLLRVTQEKPYMVGLVELGLVD---EEPEEGQLLEGVRGSEARVWGLLQEVVRLSNKVYDKTKVTVSEDVARAAPAXXXXXXXXQEERARRSAFSFAVTEMLDIPPRAKQLMLQTLNIGERLDYQAELLDKAQKFLAAQATLKD 297
BLAST of mRNA_H-akashiwo_Contig117.4.1 vs. uniprot
Match: A0A7S2V5P8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P8_9STRA) HSP 1 Score: 213 bits (542), Expect = 3.050e-63 Identity = 130/279 (46.59%), Postives = 184/279 (65.95%), Query Frame = 3
Query: 141 QAFVSLAKMRPAEVSGARRLDRQCFLMMSENSGLPEKVEYFDPSIPLDPIEA-SKSTVREMPIFPLNMVAVPTGKCPLHIFEMRYRQMMNKIQETDERFGIIMVDSRNNALASVGTTVQVYQRSLLDDGRQLIMNYGVGRFKILKIISNEPYMVALVDTDYEDIMKHSPELAKLEQQVWETLNEVVRLTNKIQDKQ-SVTVSGEATRYRPTDEPSSDQKQEDKRR-SNFSFALANMLDLPPEQKQLMVQTLDVRQRLQFQYDLLYETLKMLAAQSSLKD 968
++F++ K+ P S +R+ R +M ++ + EYFDP D +K V ++P+FPL MVA P GKCPL I+EMRYR+MMN IQ+ DE+FG+ MVD+RN L SVGT ++V QRSLL+DGRQLI+N GV RF+IL++ +PY +A V+ +D+ H LA +E+QVWE L +VVRL+NK+Q Q S+ +S T P + + D+RR ++FS A+ +MLD+PP KQ+M+QT + RL+FQ LL T K+LAAQS+LKD
Sbjct: 53 ESFLASNKLAPIPSSISRKAARS--VMTAKWWENEQPFEYFDPLSTGDGGSTEAKGKVIDLPLFPLGMVAAPFGKCPLQIYEMRYRRMMNDIQKKDEKFGMAMVDNRNGGLMSVGTIMRVTQRSLLEDGRQLIVNEGVERFRILELKQQKPYTIAAVEIIDDDMDLHGVPLASIEEQVWECLQDVVRLSNKMQKTQKSIQMSKPLTYLAPRYSDTGLTLELDRRRITDFSLAVLDMLDIPPLLKQMMLQTTNTYDRLEFQLSLLDPTRKLLAAQSALKD 329
BLAST of mRNA_H-akashiwo_Contig117.4.1 vs. uniprot
Match: A0A7S1TD37_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD37_9RHOD) HSP 1 Score: 143 bits (360), Expect = 5.840e-37 Identity = 104/258 (40.31%), Postives = 143/258 (55.43%), Query Frame = 3
Query: 228 ENSGLP-EKVEYFDPSIPLDPIEASK---STVREMPIFPLNMVAVPTGKCPLHIFEMRYRQMMNKIQETDERFGIIMVDSRNNALASVGTTVQVYQRSLLDDGRQLIMNYGVGRFKILKIISNEPYMVALVDT--DYEDIMKHSPELAKLEQQVWETLNEVVRLTNKIQDKQ---SVTVSGEATRYRPTDEPS-SDQKQEDKRR-SNFSFALANMLDLPPEQKQLMVQTLDVRQRLQFQYDLLYETLKMLAAQSSLKD 968
E+ LP E +EY+ P I + + E+P+FPL +V P G PLHIFEMRYR M N+I + D RFGI+M D + +A VG +V + L DGR L + G RF+IL+ EPY++A V D ED + E+ +L +VWETL +V+RL+NK+ DK T+S A +D S SD QE + +FSF +A +LDL +QLM+QT QRL+ Q L + LAAQ +KD
Sbjct: 15 EDENLPNEALEYYFPGINDETLNEGGLGGGETFELPLFPLGLVLHPRGNLPLHIFEMRYRLMFNRIWDGDSRFGIVMYDRERDCVARVGCVAEVQRFEPLPDGRILTNSNGKERFRILRYEKKEPYIIATVQAIKDEEDPVD---EMVELWHRVWETLKDVLRLSNKLYDKDMSLGETISSVAPPAEDSDVGSLSDSPQETILKVQDFSFCVAQLLDLAIRDQQLMLQTQSTVQRLRKQLKSLNVARQYLAAQVIIKD 269
BLAST of mRNA_H-akashiwo_Contig117.4.1 vs. uniprot
Match: D7FWB4_ECTSI (Putative ATP-dependent proteinase, possible LON protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB4_ECTSI) HSP 1 Score: 142 bits (357), Expect = 1.040e-36 Identity = 94/249 (37.75%), Postives = 134/249 (53.82%), Query Frame = 3
Query: 303 STVREMPIFPLNMVAVPTGKCPLHIFEMRYRQMMNKIQETDERFGIIMVDSRNNALASVGTTVQVYQRSLLDDGRQLIMNYGVGRFKILKIISNEPYMVALVDTDYEDIM-----------KHSPELAKLEQQVWETLNEVVRLTNKIQDK----QSVTVSGEATRYRPT--------DEPSSD----QKQEDKRRSNFSFALANMLDLPPEQKQLMVQTLDVRQRLQFQYDLLYETLKMLAAQSSLKD 968
ST E+P+F L+M A P G PLHIFEMRYRQM N I TD RFG+++ D++ G ++ QR LL DGRQ ++N V RF++LK++ PY V V+ D + L LE +V++T+N VV L NK+ ++ T+S RY P E + D Q +ED+RR FS+A+A M+ + KQL++Q+ RL ++L + K LAA+SSLKD
Sbjct: 4 STKTELPVFMLDMSACPGGVVPLHIFEMRYRQMFNDIGTTDNRFGMLVTDAKTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKTNPYTVMEVEVGIPDNKPLEGEPVKWGAEEGTRLEDLELEVYDTVNSVVDLMNKLAPPATPGENRTLSEWFLRYSPKVKRDEGLDGESAGDDLAKQAKEDERRMKFSYAVAEMIAMESRTKQLLLQSRSTAYRLMAVREILVKAQKELAAKSSLKD 252
BLAST of mRNA_H-akashiwo_Contig117.4.1 vs. uniprot
Match: M1V6S3_CYAM1 (Similar to ATP-dependent proteinase BsgA n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V6S3_CYAM1) HSP 1 Score: 141 bits (355), Expect = 3.590e-35 Identity = 95/267 (35.58%), Postives = 139/267 (52.06%), Query Frame = 3
Query: 252 VEYFDPSIPLDPIEASKSTVREMPIFPLNMVAVPTGKCPLHIFEMRYRQMMNKIQETDERFGIIMVDSRNNALASVGTTVQVYQRSLLDDGRQLIMNYGVGRFKILKIISNEPYMVALVDTDYEDIMKHSPE-------------------------LAKLEQQVWETLNEVVRLTNKIQDK----QSVTVSGEATRYRPTDEPSSDQKQEDKRRSNFSFALANMLDLPPEQKQLMVQTLDVRQRLQFQYDLLYETLKMLAAQSSLK 965
+EYF PS D + E+P+FPL +V P PLHIFEMRYRQM +I+E D RFGI+M D NA A+VGT ++ L DGR + + G RF++LK + PY+VALV+ +++ S E L LE++VW L +V+RL+NK+ ++ + V E D +Q R+ FSFA++++LD+P Q+QL++QT +RL Q LL + LAAQ ++K
Sbjct: 109 IEYFSPSEKRDTEVPVSGKLAELPLFPLPLVLSPGQPIPLHIFEMRYRQMFQRIREGDGRFGIVMYDKDRNAHAAVGTMAEINVYEPLADGRIMTSSIGRERFRVLKYTKDSPYLVALVEYFDDEVCIESVEQILAALKEPLPQSGDQETSRISKQSLTLLERRVWSALGDVLRLSNKLYNRVVSLSKLVVDNSPETVLSIPEGHLDPEQNFHRQKLFSFAVSSILDMPVRQQQLLLQTRSTAKRLLKQAQLLEGARQYLAAQVTIK 375
BLAST of mRNA_H-akashiwo_Contig117.4.1 vs. uniprot
Match: A0A7J7ID69_9RHOD (LON peptidase N-terminal domain and RING finger protein 3 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ID69_9RHOD) HSP 1 Score: 140 bits (354), Expect = 5.010e-35 Identity = 94/269 (34.94%), Postives = 141/269 (52.42%), Query Frame = 3
Query: 252 VEYFDPSIPLDPIEASKSTVREMPIFPLNMVAVPTGKCPLHIFEMRYRQMMNKIQETDERFGIIMVDSRNNALASVGTTVQVYQRSLLDDGRQLIMNYGVGRFKILKIISNEPYMVALVDTDYEDIMKHSPE-------------------------LAKLEQQVWETLNEVVRLTNKIQDKQSVTVSGEATRYRPTDEPSS-----DQKQEDKRRSNFSFALANMLDLPPEQKQLMVQTLDVRQRLQFQYDLLYETLKMLAAQSSLKD 968
+EYF P +P A + E+P+FPL +V P PLHIFEMRYRQM +I++ D RFGI+M D NA A++GT ++ L DGR + + G RF++LK PY+V LV+ ++ S E L LE++VW L +V+RL+NK+ ++ V +S + P D +Q R+ FSFA++++LD+P Q+QL++QT D +RL Q LL + LAAQ ++K+
Sbjct: 109 IEYFTPIESAEPTLAGPENLAELPLFPLPLVLSPGQPIPLHIFEMRYRQMFQRIRDGDGRFGIVMFDKDRNAHATIGTMAEITVYEPLPDGRIMTSSTGRQRFRVLKYTKESPYLVGLVEYFDDESRVESAEQIAAALKEPLTQSGTSGDNGDAEQSLTTLERRVWTALGDVLRLSNKLYNR-VVVLSKQVVENSPETXXXXXXXLIDPEQNFHRQKMFSFAVSSILDMPVRQQQLLLQTRDTAKRLLKQAQLLEGARQYLAAQVTIKN 376
BLAST of mRNA_H-akashiwo_Contig117.4.1 vs. uniprot
Match: R7QBJ2_CHOCR (Lon N-terminal domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBJ2_CHOCR) HSP 1 Score: 138 bits (347), Expect = 2.450e-34 Identity = 84/222 (37.84%), Postives = 137/222 (61.71%), Query Frame = 3
Query: 312 REMPIFPLNMVAVPTGKCPLHIFEMRYRQMMNKIQETDERFGIIMVDSRNNALASVGTTVQVYQRSLLDDGRQLIMNYGVGRFKILKIISNEPYMVALVDTDYEDIMKHSPELAKLEQQVWETLNEVVRLTNKIQDKQSVTVSGEATRYRP---TDEPSSDQKQED-----KRRSNFSFALANMLDLPPEQKQLMVQTLDVRQRLQFQYDLLYETLKMLAAQ 953
RE+P+FPL MV P PLH+FE+RYR + N+I++TD RFGI+M + +++LAS+G ++ + L DGR + N G RF+IL+II +PY A+V+ Y++ +L+ L + VW L +V+RL+NK+ DK + +S E R P D ++ + +D +R +FSFA+ +LD+P E++Q+++Q + +RL+ Q +L + LAAQ
Sbjct: 38 RELPLFPLRMVLNPGTPVPLHVFELRYRLLFNRIRDTDSRFGIVMYNPDSSSLASIGCAAELTRFEPLPDGRIMTNNIGRERFRILRIIEEKPYTRAVVEHVYDETPDE--DLSALMEDVWVVLQDVLRLSNKLYDK-VLDLSPEIRRLAPGGDADFEGAETRTKDGWPSPRRLEDFSFAVCQVLDMPLEEQQILLQIRNTGKRLRRQNKMLQTARQYLAAQ 256
BLAST of mRNA_H-akashiwo_Contig117.4.1 vs. uniprot
Match: A0A2V3IHX0_9FLOR (LON peptidase N-terminal domain and RING finger protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHX0_9FLOR) HSP 1 Score: 137 bits (345), Expect = 2.500e-34 Identity = 92/255 (36.08%), Postives = 151/255 (59.22%), Query Frame = 3
Query: 243 PEKVEYFDPSIPLDPIEASKSTVREMPIFPLNMVAVPTGKCPLHIFEMRYRQMMNKIQETDERFGIIMVDSRNNALASVGTTVQVYQRSLLDDGRQLIMNYGVGRFKILKIISNEPYMVALVDTDYEDIMKHSPELAKLEQQVWETLNEVVRLTNKIQDKQSVTVSGEATRYRP------TDE---PSSDQKQEDKRRSNFSFALANMLDLPPEQKQLMVQTLDVRQRLQFQYDLLYETLKMLAAQSSLKDLNLG 980
P+ V++F+ S D ++ +S + E+P+FPL +V +P PLHIFE+RYR + N++++ D RFGI++ D+ ++LA VG + ++ + L DGR + N G RF+I+KII +PY ALV + D +L+ L ++V L +V+RL+NK+ DK + +S + R P TD+ PS QE FSF++ +LD+P +++Q+++Q D RL+ Q +L K LAAQ ++K+ LG
Sbjct: 69 PQAVQFFNASKQPDSVD--ESALVELPLFPLQLVLMPAMNLPLHIFELRYRLLFNRLRDGDARFGIVLYDANTSSLAQVGCSAELTRFEPLPDGRIMTDNVGRRRFEIVKIIDEKPYTRALVR--FFDDKAPGGDLSSLVKEVSLALQDVLRLSNKLYDK-VLDLSPDIKRLAPNGQIPQTDDSGWPSPSMVQE------FSFSVCQVLDMPLKEQQILLQIDDTAARLRRQEKMLDTARKYLAAQVTIKEAGLG 312
BLAST of mRNA_H-akashiwo_Contig117.4.1 vs. uniprot
Match: M2VXC5_GALSU (ATP-dependent Lon protease n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXC5_GALSU) HSP 1 Score: 134 bits (337), Expect = 2.590e-33 Identity = 93/264 (35.23%), Postives = 148/264 (56.06%), Query Frame = 3
Query: 195 RLDRQCFLMMSENSGLPEKVEYFDPSIPLDPIEASKSTV------REMPIFPLNMVAVPTGKCPLHIFEMRYRQMMNKIQETDERFGIIMVDSRNNALASVGTTVQVYQRSLLDDGRQLIMNYGVGRFKILKIISNEPYMVALVDTDYEDIMKHSPELAKLEQQVWETLNEVVRLTNKIQDKQSVTVSGEATRYRPTDEPSSDQKQEDKRRSNFSFALANMLDLPPEQKQLMVQTLDVRQRLQFQYDLLYETLKMLAAQSSLKD 968
R R F++ S + + VEY IPL P ++ + R +P+FPL++V P PLHIFEMRYR + N+I+E D+ FGI++ + N+++A G +++ + L DGR L +N G RF++ II ++P++ A V T EDI + L + VW LN+V+ L+NK+ K +V +S E R P E ++ R FS+ ++ +LD+P + +QL++QT + R Q Q +LL K LAAQ ++ D
Sbjct: 42 RKSRSFFIVKLACSSIGD-VEY----IPLTPAPSNVTEQEPALGNRVLPLFPLSLVVQPDATIPLHIFEMRYRLLFNRIKEGDKLFGIVLYNKNNDSVARYGCLMELIRFEPLPDGRMLTVNVGKERFRVNHIIKDKPFITASVVT-VEDI-DCDDTIFSLGEAVWTDLNQVLSLSNKLYGK-NVCLSEELRRLAPNPE-----SRDRHRLIMFSYRVSQVLDIPVQDQQLLLQTQSTKDRFQHQLELLEHARKFLAAQLAIND 292
BLAST of mRNA_H-akashiwo_Contig117.4.1 vs. uniprot
Match: A0A1Z9LQX7_9CYAN (ATP-dependent protease n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A1Z9LQX7_9CYAN) HSP 1 Score: 125 bits (313), Expect = 9.390e-31 Identity = 80/227 (35.24%), Postives = 125/227 (55.07%), Query Frame = 3
Query: 297 SKSTVREMPIFPL-NMVAVPTGKCPLHIFEMRYRQMMNKIQETDERFGIIMVDSRNNALASVGTTVQVYQRSLLDDGRQLIMNYGVGRFKILKIISNEPYMVALVDTDYEDIMKHSPELAKLEQQVWETLNEVVRLTNKIQDKQSVTVSGEATRYRPTDEPSSDQKQEDKRRSNFSFALANMLDLPPEQKQLMVQTLDVRQRLQFQYDLLYETLKMLAAQSSLKDLN 974
S +VRE+P+FPL ++V P PLHIFE RYR ++ + ETD+RFGI+ ++ +A +G +V Q DDGR I+ G RF++L I PY A+V ++ ++ +P+L L QV L +VV LT K+Q+++ P D P D +E SF + LD ++Q +++ D ++RL+ Q++LL T + LAA++ L DLN
Sbjct: 2 SDFSVRELPLFPLPDVVLFPQQLLPLHIFESRYRMLLQTVLETDKRFGIVRINPETGEMAEIGCCAEVLQHQTADDGRSYIVTLGQXRFRLLNITRETPYRTAMVSWLEDEPVEDAPQLNXLRDQVDAALKDVVSLTAKLQNREVEL---------PDDLP--DLPRE------LSFWIGAHLDQAAAEQQSLLELTDTQERLERQFELLDHTRRQLAARTVLMDLN 211 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig117.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig117.4.1 >prot_H-akashiwo_Contig117.4.1 ID=prot_H-akashiwo_Contig117.4.1|Name=mRNA_H-akashiwo_Contig117.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=317bp MKMKRCVVLLCLCLQIFTADGFSRGAVARGRQAFVSLAKMRPAEVSGARRback to top mRNA from alignment at H-akashiwo_Contig117:178264..179280+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig117.4.1 ID=mRNA_H-akashiwo_Contig117.4.1|Name=mRNA_H-akashiwo_Contig117.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1017bp|location=Sequence derived from alignment at H-akashiwo_Contig117:178264..179280+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig117:178264..179280+ >mRNA_H-akashiwo_Contig117.4.1 ID=mRNA_H-akashiwo_Contig117.4.1|Name=mRNA_H-akashiwo_Contig117.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=951bp|location=Sequence derived from alignment at H-akashiwo_Contig117:178264..179280+ (Heterosigma akashiwo CCMP452)back to top |