mRNA_H-akashiwo_Contig1169.6.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1169.6.1 vs. uniprot
Match: D8LFU8_ECTSI (Glutathione peroxidase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFU8_ECTSI) HSP 1 Score: 225 bits (574), Expect = 3.180e-69 Identity = 119/176 (67.61%), Postives = 136/176 (77.27%), Query Frame = 2
Query: 122 LGNLFGGGGSSPSGDGSIFDFTVKDATGKDVNLGSTYKGKKNAFLIVNVASK*GLTAQNYKELAQLYDEYGSQGLEILGFPCNQFGGQEPGSDAEIQQFAKARGAKYPVFAKIEVNGPGADPLYKFLKEQKGEALG-SEIKWNFAKFLADREGKVVKRYAPPDSPLSIEGDIKALL 646
LG LFGGGG+ + SIFDF VKDATG +V+L + YKG+K AFLIVNVASK GLTAQNY ELA LY +Y +GLEILGFP NQFG QEPG++AEIQ FAKARGA YPVFAK+EVNG GA PLYKFLK+++G LG S IKWNF KFL D +G V R+ P +SP S E DI LL
Sbjct: 4 LGKLFGGGGAPAT---SIFDFKVKDATGGEVDL-ADYKGQKKAFLIVNVASKXGLTAQNYAELAALYGKYAGRGLEILGFPSNQFGSQEPGTNAEIQDFAKARGATYPVFAKVEVNGFGAIPLYKFLKDRQGGGLGISAIKWNFTKFLCDADGVPVNRFGPTESPFSFEQDIVDLL 175
BLAST of mRNA_H-akashiwo_Contig1169.6.1 vs. uniprot
Match: A0A2Z5VKM7_CHAMQ (Glutathione peroxidase n=1 Tax=Chattonella marina var. antiqua TaxID=859642 RepID=A0A2Z5VKM7_CHAMQ) HSP 1 Score: 221 bits (563), Expect = 5.460e-67 Identity = 114/179 (63.69%), Postives = 136/179 (75.98%), Query Frame = 2
Query: 116 NILGNLFG--GGGSSPSGDGSIFDFTVKDATGKDVNLGSTYKGKKNAFLIVNVASK*GLTAQNYKELAQLYDEYGSQGLEILGFPCNQFGGQEPGSDAEIQQFAKARGAKYPVFAKIEVNGPGADPLYKFLKEQKGEALGSEIKWNFAKFLADREGKVVKRYAPPDSPLSIEGDIKALL 646
N+ G L G GGG S + SIF+F V+D+ GK V L S Y GKK FL+VNVAS GLTA NY+EL QLY++YG +GLEIL FPCNQFG QEPGS+AEIQ+FAKARGA++PVF+KI+VNG PLY +LK +KGE G++IKWNF+KFL D EGK RYAP SPL+IE DIK LL
Sbjct: 41 NMKGLLDGILGGGKKSSAE-SIFEFEVEDSNGKLVKL-SDYSGKKKGFLVVNVASACGLTASNYQELPQLYEKYGEEGLEILAFPCNQFGAQEPGSNAEIQKFAKARGAEFPVFSKIDVNGDAEHPLYTYLKSEKGELGGNDIKWNFSKFLVDAEGKPTGRYAPTTSPLAIEDDIKKLL 217
BLAST of mRNA_H-akashiwo_Contig1169.6.1 vs. uniprot
Match: A0A4Y7J7H9_PAPSO (Glutathione peroxidase n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7J7H9_PAPSO) HSP 1 Score: 211 bits (536), Expect = 6.240e-63 Identity = 110/169 (65.09%), Postives = 130/169 (76.92%), Query Frame = 2
Query: 143 GGSSPSGDGSIFDFTVKDATGKDVNLGSTYKGKKNAFLIVNVASK*GLTAQNYKELAQLYDEYGSQGLEILGFPCNQFGGQEPGSDAEIQQFAKAR-GAKYPVFAKIEVNGPGADPLYKFLKEQKGEALGSEIKWNFAKFLADREGKVVKRYAPPDSPLSIEGDIKALL 646
G +S S SI+DFTVKDA G DV+L STYKGK A LIVNVAS+ GLT NY EL+Q+YD+Y +QGLEIL FPCNQFGGQEPG++ +I +FA R A+YP+F K++VNG A PLYKFLK KG LG IKWNF+KFL D+EG+VV RYAP SPLSIE DIK +L
Sbjct: 49 GMASQSSKSSIYDFTVKDARGNDVDL-STYKGK--ALLIVNVASQCGLTNSNYTELSQVYDKYKNQGLEILAFPCNQFGGQEPGNNEQIVEFACTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFLGDSIKWNFSKFLVDKEGQVVDRYAPTTSPLSIEKDIKKVL 214
BLAST of mRNA_H-akashiwo_Contig1169.6.1 vs. uniprot
Match: A0A7I8KNK0_SPIIN (Glutathione peroxidase n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KNK0_SPIIN) HSP 1 Score: 207 bits (527), Expect = 2.940e-62 Identity = 107/160 (66.88%), Postives = 123/160 (76.88%), Query Frame = 2
Query: 170 SIFDFTVKDATGKDVNLGSTYKGKKNAFLIVNVASK*GLTAQNYKELAQLYDEYGSQGLEILGFPCNQFGGQEPGSDAEIQQFAKAR-GAKYPVFAKIEVNGPGADPLYKFLKEQKGEALGSEIKWNFAKFLADREGKVVKRYAPPDSPLSIEGDIKALL 646
S+ DFTVKDA G DVNLGS YKGK A LIVNVAS+ GLT NY EL+QLY++Y S+GLEIL FPCNQFGGQEPGS+ +I +FA R A+YP+F K++VNG A P+YKFLK KG G IKWNFAKFL D+EG VV RYAP SPLSIE DIK +L
Sbjct: 11 SVHDFTVKDARGNDVNLGS-YKGK--ALLIVNVASQCGLTNSNYTELSQLYEKYKSKGLEILAFPCNQFGGQEPGSNDQIVEFACTRFKAEYPIFDKVDVNGQNAAPVYKFLKSSKGGLFGDSIKWNFAKFLVDKEGNVVDRYAPTTSPLSIEKDIKKIL 167
BLAST of mRNA_H-akashiwo_Contig1169.6.1 vs. uniprot
Match: A0A059C2I3_EUCGR (Glutathione peroxidase n=3 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059C2I3_EUCGR) HSP 1 Score: 209 bits (533), Expect = 4.810e-62 Identity = 108/167 (64.67%), Postives = 127/167 (76.05%), Query Frame = 2
Query: 149 SSPSGDGSIFDFTVKDATGKDVNLGSTYKGKKNAFLIVNVASK*GLTAQNYKELAQLYDEYGSQGLEILGFPCNQFGGQEPGSDAEIQQFAKAR-GAKYPVFAKIEVNGPGADPLYKFLKEQKGEALGSEIKWNFAKFLADREGKVVKRYAPPDSPLSIEGDIKALL 646
+S S GSI+DFTVKDA G DV+LGS YKGK LIVNVAS+ GLT NY EL+Q+Y++Y +QGLEIL FPCNQFG QEPG++ +I +FA R A+YP+F K++VNG ADPLYKFLK KG G IKWNF+KFL D+EG VV RYAP SPLSIE DIK LL
Sbjct: 84 ASQSSKGSIYDFTVKDARGNDVDLGS-YKGK--VLLIVNVASQCGLTNSNYTELSQVYEKYKNQGLEILAFPCNQFGAQEPGTNEQIVEFACTRFKAEYPIFDKVDVNGENADPLYKFLKSSKGGLFGDNIKWNFSKFLIDKEGNVVDRYAPTTSPLSIEKDIKKLL 247
BLAST of mRNA_H-akashiwo_Contig1169.6.1 vs. uniprot
Match: A0A3B6QI62_WHEAT (Glutathione peroxidase n=5 Tax=Triticinae TaxID=1648030 RepID=A0A3B6QI62_WHEAT) HSP 1 Score: 206 bits (525), Expect = 5.670e-62 Identity = 107/167 (64.07%), Postives = 124/167 (74.25%), Query Frame = 2
Query: 149 SSPSGDGSIFDFTVKDATGKDVNLGSTYKGKKNAFLIVNVASK*GLTAQNYKELAQLYDEYGSQGLEILGFPCNQFGGQEPGSDAEIQQFAKAR-GAKYPVFAKIEVNGPGADPLYKFLKEQKGEALGSEIKWNFAKFLADREGKVVKRYAPPDSPLSIEGDIKALL 646
++ S S+ DFTVKDA+GKDV+L STYKGK LIVNVAS+ GLT NY ELAQLY++Y QG EIL FPCNQFGGQEPG++ EI QFA R A+YP+F K++VNG P+YKFLK KG G IKWNF+KFL D+EG VV RYAP SPLSIE DIK LL
Sbjct: 3 AAASSASSVHDFTVKDASGKDVDL-STYKGK--VLLIVNVASQCGLTNSNYTELAQLYEKYKDQGFEILAFPCNQFGGQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGDNVAPVYKFLKSSKGSLFGDNIKWNFSKFLVDKEGHVVDRYAPTTSPLSIEKDIKKLL 166
BLAST of mRNA_H-akashiwo_Contig1169.6.1 vs. uniprot
Match: A0A2T7FA40_9POAL (Glutathione peroxidase n=7 Tax=Paniceae TaxID=147428 RepID=A0A2T7FA40_9POAL) HSP 1 Score: 209 bits (531), Expect = 7.450e-62 Identity = 107/167 (64.07%), Postives = 126/167 (75.45%), Query Frame = 2
Query: 149 SSPSGDGSIFDFTVKDATGKDVNLGSTYKGKKNAFLIVNVASK*GLTAQNYKELAQLYDEYGSQGLEILGFPCNQFGGQEPGSDAEIQQFAKAR-GAKYPVFAKIEVNGPGADPLYKFLKEQKGEALGSEIKWNFAKFLADREGKVVKRYAPPDSPLSIEGDIKALL 646
S+ S S+ DFTVKDA+GKDV+L STYKGK LIVNVAS+ GLT NY EL+QLY++Y QG EIL FPCNQFGGQEPG++ EI QFA R A+YP+F K++VNG P+YKFLK KG G IKWNF+KFL D+EG+VV+RYAP SPLSIE DIK LL
Sbjct: 73 SAASSASSVHDFTVKDASGKDVDL-STYKGK--VLLIVNVASQCGLTNSNYTELSQLYEKYKDQGFEILAFPCNQFGGQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGDNTAPIYKFLKSSKGSLFGENIKWNFSKFLVDKEGRVVERYAPTTSPLSIEKDIKKLL 236
BLAST of mRNA_H-akashiwo_Contig1169.6.1 vs. uniprot
Match: Q6JAH6_MAIZE (Glutathione peroxidase n=43 Tax=cellular organisms TaxID=131567 RepID=Q6JAH6_MAIZE) HSP 1 Score: 206 bits (524), Expect = 7.740e-62 Identity = 106/160 (66.25%), Postives = 122/160 (76.25%), Query Frame = 2
Query: 170 SIFDFTVKDATGKDVNLGSTYKGKKNAFLIVNVASK*GLTAQNYKELAQLYDEYGSQGLEILGFPCNQFGGQEPGSDAEIQQFAKAR-GAKYPVFAKIEVNGPGADPLYKFLKEQKGEALGSEIKWNFAKFLADREGKVVKRYAPPDSPLSIEGDIKALL 646
S+ DF VKDA+GKDV+L STYKGK LIVNVAS+ GLT NY ELAQLY++Y QG EIL FPCNQFGGQEPG++ EI QFA R A+YP+F K++VNG A P+YKFLK KG G IKWNF+KFL D+EG+VV RYAP SPLSIE DIK LL
Sbjct: 9 SVHDFIVKDASGKDVDL-STYKGK--VLLIVNVASQCGLTNSNYTELAQLYEKYKDQGFEILAFPCNQFGGQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGSNAAPIYKFLKSSKGGLFGDSIKWNFSKFLVDKEGRVVDRYAPTTSPLSIEKDIKKLL 165
BLAST of mRNA_H-akashiwo_Contig1169.6.1 vs. uniprot
Match: I1J0G2_BRADI (Glutathione peroxidase n=7 Tax=Poaceae TaxID=4479 RepID=I1J0G2_BRADI) HSP 1 Score: 206 bits (524), Expect = 7.740e-62 Identity = 104/160 (65.00%), Postives = 123/160 (76.88%), Query Frame = 2
Query: 170 SIFDFTVKDATGKDVNLGSTYKGKKNAFLIVNVASK*GLTAQNYKELAQLYDEYGSQGLEILGFPCNQFGGQEPGSDAEIQQFAKAR-GAKYPVFAKIEVNGPGADPLYKFLKEQKGEALGSEIKWNFAKFLADREGKVVKRYAPPDSPLSIEGDIKALL 646
S++DFTVKDA+GKDV+L S YKGK LIVNVAS+ GLT NY EL+Q+Y++Y QGLEIL FPCNQF GQEPG++ EI QFA R A+YP+F K++VNG A PLYKFLK KG G +KWNF+KFL D+EG+VV RYAP SPLSIE DIK LL
Sbjct: 9 SVYDFTVKDASGKDVDL-SVYKGK--VLLIVNVASQCGLTNSNYTELSQVYEKYKDQGLEILAFPCNQFAGQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGSNASPLYKFLKSSKGGIFGDSVKWNFSKFLVDKEGRVVDRYAPTTSPLSIEKDIKKLL 165
BLAST of mRNA_H-akashiwo_Contig1169.6.1 vs. uniprot
Match: A0A368PPJ2_SETIT (Glutathione peroxidase n=4 Tax=Paniceae TaxID=147428 RepID=A0A368PPJ2_SETIT) HSP 1 Score: 207 bits (528), Expect = 1.960e-61 Identity = 106/167 (63.47%), Postives = 126/167 (75.45%), Query Frame = 2
Query: 149 SSPSGDGSIFDFTVKDATGKDVNLGSTYKGKKNAFLIVNVASK*GLTAQNYKELAQLYDEYGSQGLEILGFPCNQFGGQEPGSDAEIQQFAKAR-GAKYPVFAKIEVNGPGADPLYKFLKEQKGEALGSEIKWNFAKFLADREGKVVKRYAPPDSPLSIEGDIKALL 646
++ S S+ DFTVKDA+GKDV+L STYKGK LIVNVAS+ GLT NY EL+QLY++Y QG EIL FPCNQFGGQEPG++ EI QFA R A+YP+F K++VNG P+YKFLK KG G IKWNF+KFL D+EG+VV+RYAP SPLSIE DIK LL
Sbjct: 74 AAASSASSVHDFTVKDASGKDVDL-STYKGK--VLLIVNVASQCGLTNSNYTELSQLYEKYKDQGFEILAFPCNQFGGQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGDNTAPIYKFLKSSKGSLFGENIKWNFSKFLVDKEGRVVERYAPTTSPLSIEKDIKKLL 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1169.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1169.6.1 >prot_H-akashiwo_Contig1169.6.1 ID=prot_H-akashiwo_Contig1169.6.1|Name=mRNA_H-akashiwo_Contig1169.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=63bp MEMMCGPLNILGNLFGGGGSSPSGDGSIFDFTVKDATGKDVNLGSTYKGKback to top mRNA from alignment at H-akashiwo_Contig1169:299205..301308+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1169.6.1 ID=mRNA_H-akashiwo_Contig1169.6.1|Name=mRNA_H-akashiwo_Contig1169.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=2104bp|location=Sequence derived from alignment at H-akashiwo_Contig1169:299205..301308+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1169:299205..301308+ >mRNA_H-akashiwo_Contig1169.6.1 ID=mRNA_H-akashiwo_Contig1169.6.1|Name=mRNA_H-akashiwo_Contig1169.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=189bp|location=Sequence derived from alignment at H-akashiwo_Contig1169:299205..301308+ (Heterosigma akashiwo CCMP452)back to top |