mRNA_H-akashiwo_Contig1168.4.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A7S3Y8U8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8U8_HETAK) HSP 1 Score: 400 bits (1027), Expect = 3.100e-137 Identity = 204/221 (92.31%), Postives = 207/221 (93.67%), Query Frame = 1
Query: 106 VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTLQKD---------RAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKAFI 741
VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSS+ SIKSGVPQGAIWSPLLFDLFIRNV QRVR+ALCLFYADDLTLQKD RAAEELNDDLQRL EFGKEWLLEFEPTKSQELIITNSA NHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDD AKMMAYKAF+
Sbjct: 1 VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFV 221
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A7S3Y8J9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J9_HETAK) HSP 1 Score: 390 bits (1002), Expect = 2.640e-135 Identity = 201/230 (87.39%), Postives = 209/230 (90.87%), Query Frame = 1
Query: 88 RKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTLQKD---------RAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGG---VIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKAFI 741
RKDVRLV LDFKGA DKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSS+ SIKSGVPQGAIWSPLLFDLFIRNV QRVR+ALCLFYADDLTLQKD RAAEELNDDLQRL EFGKEWLLEFEPTKSQELIITN A++KVTHPPL MGG +++EEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDD AKMMAYKAF+
Sbjct: 2 RKDVRLVELDFKGACDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNLVADNKVTHPPLPMGGGVVMVIEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFV 231
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK) HSP 1 Score: 336 bits (862), Expect = 3.620e-107 Identity = 179/256 (69.92%), Postives = 201/256 (78.52%), Query Frame = 1
Query: 4 NQFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTLQK-----DRAAE----ELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANH-KVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKAFI 741
NQFGFLP TGT+DVGVILAD+IS ALE RKDVRLVALDF+GAFDKVWWRGLLAHLWAVGVRSKA++L +SYLSDRALFVVANG S SIKSGVPQGAIWSPLLFDLF+RNV QRVR+ALCLFYADDLTL K ++AA+ ELN DL+RL FGKEWLLEFE TKS L I+NS K H P MGG V+E+E LE LGF +D +GNWS AEA A AR+RLGA+RR+A +LDD M YK F+
Sbjct: 419 NQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYADDLTLLKVIDRNNKAAQDAQLELNQDLERLFRFGKEWLLEFEATKSFGLTISNSKGKDLKGRHIPCRMGGHEVKEQEVLEILGFLVDNKGNWSKFAEATASAARQRLGALRRLAPLLDDDCINMVYKTFV 674
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK) HSP 1 Score: 186 bits (471), Expect = 2.640e-51 Identity = 117/236 (49.58%), Postives = 148/236 (62.71%), Query Frame = 1
Query: 4 NQFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGD----SSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTL------QKDRAAE----ELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGF-TIDPRGNWSLHAEAVAKEARK 666
NQFGFLP TGT+DVGVILAD+IS ALE RKDVRLVALDF+GAFDKVWWRGLLAHLWAVGVRSKA++L +SYL + + G+ +S I+ + PL F+RNV QRVRKALCLFY +DLTL + + AA+ +L+ DL+RL FGKEWLLE E + L +G V+E++ LE LGF + +G WS +++ A AR+
Sbjct: 419 NQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLVGQG--PLRGGEWADLRASQHQIRCATGSYLVPPPL----FVRNVRQRVRKALCLFYVNDLTLLLKVIGRNNEAAQNVQWDLSQDLKRLFCFGKEWLLELEAS--------------------LGIGEHEVKEQKVLEILGFFNENNKGTWSQFSKSTATAARE 628
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A0P4VTV9_SCYOL (Reverse transcriptase domain-containing protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VTV9_SCYOL) HSP 1 Score: 159 bits (401), Expect = 5.420e-41 Identity = 89/252 (35.32%), Postives = 145/252 (57.54%), Query Frame = 1
Query: 7 QFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTL-------QKDRAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKAFI 741
QFGF PG T D+ ++L AL+ D +VALD GAFD+VW GLL L A G++ +L+ YL R L VV NG +S +++ VPQG++ P+L+++++ ++L+++ YADD TL + RAAEE+N L + E+G W + F P K+Q ++++ S A LS GG+ +E +E ++ LG +D + H + +A +A R+ ++RR+A++LD +++ YKA I
Sbjct: 322 QFGFRPGRSTSDLLMLLTGGWQDALDGGLDSVVVALDIAGAFDRVWHGGLLEKLRAKGIQGDLLQLLGDYLQGRTLQVVVNGQASESLPVRASVPQGSVLGPVLWNIYVDDLLRQLPAVSA--YADDCTLSCTYPRHESVRAAEEINQQLGVIQEWGARWQVTFAPEKTQAMVVSRSPAAEPAVEGGLSFGGLPLELQESVKILGVEVDRGLRFDRHVKHIALKASHRVSSLRRVANLLDRRGRLLLYKAQI 571
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A483AAC8_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=uncultured SUP05 cluster bacterium TaxID=655186 RepID=A0A483AAC8_9GAMM) HSP 1 Score: 152 bits (384), Expect = 6.530e-40 Identity = 86/251 (34.26%), Postives = 136/251 (54.18%), Query Frame = 1
Query: 4 NQFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTL-----QKDRAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKAFI 741
+Q GF PG V+ + + + AL+ K+VR+V D AFD+VW +GLL L ++G+R +++YLS+R VV N +SS+ I +GVPQG+I PLLF +FI ++L + + LF ADD +L A+ LNDDL +L+ + +WL+ F P K++ + I+ +K P L M I+ + + LG + GNW+ H + + K+A R+ +R+ +LD Y FI
Sbjct: 50 HQSGFTPGDSAVNQLLYITNEFGRALDEGKEVRVVFCDISKAFDRVWHKGLLRKLESIGIRGSLLSWVRNYLSERKQRVVINNSTSSWRDINAGVPQGSILGPLLFIVFINDILTDINSTIKLF-ADDTSLYLIVDDPQETAQTLNDDLVKLHAWSTKWLVNFNPQKTETMTISRKL--NKPHQPNLIMNNTIISTVTEHKHLGLQLSDDGNWNKHIDMITKKAFSRVNILRKFKFILDRKTLETIYITFI 297
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A0P4VX79_SCYOL (Uncharacterized protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VX79_SCYOL) HSP 1 Score: 153 bits (386), Expect = 1.120e-38 Identity = 90/252 (35.71%), Postives = 140/252 (55.56%), Query Frame = 1
Query: 7 QFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTLQKD-------RAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKAFI 741
QFGF PG T D+ +I++ ALE D +VALD GAFD+VW GL+ L A G++ L++ YL R L VV NG +S I++ VPQG++ P+L++++I ++L+++ L YADD +L + RA ELN L+ + E+G+ W + F P K+Q ++I+ S A L G + +E ++ LG T+D + H AVA + +R+ A+RR++ LD + YKA I
Sbjct: 476 QFGFRPGRSTADLLLIISKDWQDALEEGLDTLVVALDIAGAFDRVWHAGLVKKLCAKGIQGNLLALLEDYLQGRTLRVVINGQASQPLPIQASVPQGSVLGPILWNIYIDDLLRQIPTLLA--YADDCSLSRSYCRSDSQRAVRELNRQLRLVMEWGEAWQVSFAPEKTQAMVISRSPAASPAVSGCLFFGDQTLPLQEHVKLLGVTVDCGLRFDRHVAAVAHQVSQRVSALRRMSGNLDSRGILTLYKAQI 725
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: UPI001E1D0EAE (uncharacterized protein LOC123517690 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D0EAE) HSP 1 Score: 149 bits (376), Expect = 4.030e-38 Identity = 90/250 (36.00%), Postives = 137/250 (54.80%), Query Frame = 1
Query: 7 QFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTLQKD-------RAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKA 735
QFGF PG D+ ++L S AL+ K +VALD +GAFDKVW GLLA L A GV L YL +R L VV +G S ++K+GVPQG+ PLL++++I ++L + YADDLTL + A+ +N + + +W ++F P K+Q II+ S T LS+ G + ++++++ LG T D + H E +A+EA +L ++RR++ +LDD + YKA
Sbjct: 282 QFGFRPGRSAADLHLLLTSEWSAALDAGKATAVVALDIEGAFDKVWPAGLLAKLRAAGVDGPILLLFGDYLRERNLKVVIDGQESEQHAVKAGVPQGSCLGPLLWNIYINDLLHLIPSVRA--YADDLTLAQSFSSAEDTATADHMNVTRNSIVSWDSKWQVKFAPNKTQMTIISRSR-----TPLQLSLEGKTIRQQDEMDVLGVTYDFALTFRHHIERLAREASGKLASLRRMSWLLDDKGLEILYKA 524
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A8J9YV55_BRALA (SLC22A5 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YV55_BRALA) HSP 1 Score: 150 bits (380), Expect = 6.590e-38 Identity = 95/243 (39.09%), Postives = 133/243 (54.73%), Query Frame = 1
Query: 7 QFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTL--------QKDRAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAV--AKEARKRLGAIRRIAHMLD 705
QFGF P T D+ IL+ S AL+ +VR +ALD KGAFDKVW GL + L + G+ K + SYL +R++ VV +G SS+ T I + VP G+I PLLF ++I ++ L L YADD TL LN DL+R+ + +W + FEPTK + + I+ K+ L G + EK++LE L TID + W+ H V A A +RLGA+RR+AH L+
Sbjct: 645 QFGFRPHQSTADILTILSQHWSNALDRGYEVRHIALDIKGAFDKVWHNGLCSKLKSKGISGKLLTWISSYLLNRSMKVVLSGQSSTTTPINASVPLGSILGPLLFSVYIDDLGDECENPLYL-YADDSTLYCVIRTTNDSSTTTASLNRDLERMRCWAGKWKVTFEPTKCKAMTISRKRCPTKID---LFFGNTKLAEKDELEILRVTIDNKLTWTKHISNVNIAARAGQRLGALRRVAHKLN 883
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A0P4VVV8_SCYOL (Reverse transcriptase domain-containing protein n=2 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VVV8_SCYOL) HSP 1 Score: 150 bits (378), Expect = 1.210e-37 Identity = 88/250 (35.20%), Postives = 140/250 (56.00%), Query Frame = 1
Query: 7 QFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTLQKDRAAEE-------LNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKA 735
QFGF G D+ ++L+ S AL+ K +VALD +GAFDKVW L L A+GV +L ++YL DR L V+ NG S+ I++GVPQG+ PLL+++++ +++ V A +ADD+TL EE +N L R+ +G++W ++F K+Q+L I N P L+ G + ++++E LG T D + + H E +A+EA +L ++RRI+++LD + YKA
Sbjct: 556 QFGFRQGRSAADLHLLLSTEWSGALDQGKTTAVVALDIEGAFDKVWHAALTTKLRAIGVDGALLQLFENYLRDRHLKVIINGRESNPQPIRAGVPQGSCLGPLLWNVYVNDLMHLVPTAKA--FADDITLSHSYGLEEEAAANHDINATLSRVAAWGRKWQVKFAAHKTQQLTI-----NRTSRAPRLTFNGETLTPRDEVEVLGVTYDRKLTFRTHVERLAREASGKLASLRRISYLLDAKGLELLYKA 798 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1168.4.1 >prot_H-akashiwo_Contig1168.4.1 ID=prot_H-akashiwo_Contig1168.4.1|Name=mRNA_H-akashiwo_Contig1168.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=248bp PNQFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRback to top mRNA from alignment at H-akashiwo_Contig1168:243242..244012- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1168.4.1 ID=mRNA_H-akashiwo_Contig1168.4.1|Name=mRNA_H-akashiwo_Contig1168.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=771bp|location=Sequence derived from alignment at H-akashiwo_Contig1168:243242..244012- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1168:243242..244012- >mRNA_H-akashiwo_Contig1168.4.1 ID=mRNA_H-akashiwo_Contig1168.4.1|Name=mRNA_H-akashiwo_Contig1168.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=744bp|location=Sequence derived from alignment at H-akashiwo_Contig1168:243242..244012- (Heterosigma akashiwo CCMP452)back to top |