mRNA_H-akashiwo_Contig1168.4.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1168.4.1
Unique NamemRNA_H-akashiwo_Contig1168.4.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A7S3Y8U8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8U8_HETAK)

HSP 1 Score: 400 bits (1027), Expect = 3.100e-137
Identity = 204/221 (92.31%), Postives = 207/221 (93.67%), Query Frame = 1
Query:  106 VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTLQKD---------RAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKAFI 741
            VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSS+ SIKSGVPQGAIWSPLLFDLFIRNV QRVR+ALCLFYADDLTLQKD         RAAEELNDDLQRL EFGKEWLLEFEPTKSQELIITNSA NHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDD AKMMAYKAF+
Sbjct:    1 VALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNSAENHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFV 221          
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A7S3Y8J9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J9_HETAK)

HSP 1 Score: 390 bits (1002), Expect = 2.640e-135
Identity = 201/230 (87.39%), Postives = 209/230 (90.87%), Query Frame = 1
Query:   88 RKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTLQKD---------RAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGG---VIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKAFI 741
            RKDVRLV LDFKGA DKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSS+ SIKSGVPQGAIWSPLLFDLFIRNV QRVR+ALCLFYADDLTLQKD         RAAEELNDDLQRL EFGKEWLLEFEPTKSQELIITN  A++KVTHPPL MGG   +++EEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDD AKMMAYKAF+
Sbjct:    2 RKDVRLVELDFKGACDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDREEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELIITNLVADNKVTHPPLPMGGGVVMVIEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDRAKMMAYKAFV 231          
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK)

HSP 1 Score: 336 bits (862), Expect = 3.620e-107
Identity = 179/256 (69.92%), Postives = 201/256 (78.52%), Query Frame = 1
Query:    4 NQFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTLQK-----DRAAE----ELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANH-KVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKAFI 741
            NQFGFLP TGT+DVGVILAD+IS ALE RKDVRLVALDF+GAFDKVWWRGLLAHLWAVGVRSKA++L +SYLSDRALFVVANG  S   SIKSGVPQGAIWSPLLFDLF+RNV QRVR+ALCLFYADDLTL K     ++AA+    ELN DL+RL  FGKEWLLEFE TKS  L I+NS     K  H P  MGG  V+E+E LE LGF +D +GNWS  AEA A  AR+RLGA+RR+A +LDD    M YK F+
Sbjct:  419 NQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLSDRALFVVANGQISERVSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYADDLTLLKVIDRNNKAAQDAQLELNQDLERLFRFGKEWLLEFEATKSFGLTISNSKGKDLKGRHIPCRMGGHEVKEQEVLEILGFLVDNKGNWSKFAEATASAARQRLGALRRLAPLLDDDCINMVYKTFV 674          
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A7S3Y8Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Z6_HETAK)

HSP 1 Score: 186 bits (471), Expect = 2.640e-51
Identity = 117/236 (49.58%), Postives = 148/236 (62.71%), Query Frame = 1
Query:    4 NQFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGD----SSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTL------QKDRAAE----ELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGF-TIDPRGNWSLHAEAVAKEARK 666
            NQFGFLP TGT+DVGVILAD+IS ALE RKDVRLVALDF+GAFDKVWWRGLLAHLWAVGVRSKA++L +SYL  +    +  G+     +S   I+       +  PL    F+RNV QRVRKALCLFY +DLTL      + + AA+    +L+ DL+RL  FGKEWLLE E +                    L +G   V+E++ LE LGF   + +G WS  +++ A  AR+
Sbjct:  419 NQFGFLPDTGTLDVGVILADQISRALEARKDVRLVALDFQGAFDKVWWRGLLAHLWAVGVRSKAYQLFESYLVGQG--PLRGGEWADLRASQHQIRCATGSYLVPPPL----FVRNVRQRVRKALCLFYVNDLTLLLKVIGRNNEAAQNVQWDLSQDLKRLFCFGKEWLLELEAS--------------------LGIGEHEVKEQKVLEILGFFNENNKGTWSQFSKSTATAARE 628          
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A0P4VTV9_SCYOL (Reverse transcriptase domain-containing protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VTV9_SCYOL)

HSP 1 Score: 159 bits (401), Expect = 5.420e-41
Identity = 89/252 (35.32%), Postives = 145/252 (57.54%), Query Frame = 1
Query:    7 QFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTL-------QKDRAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKAFI 741
            QFGF PG  T D+ ++L      AL+   D  +VALD  GAFD+VW  GLL  L A G++    +L+  YL  R L VV NG +S    +++ VPQG++  P+L+++++ ++L+++       YADD TL       +  RAAEE+N  L  + E+G  W + F P K+Q ++++ S A        LS GG+ +E +E ++ LG  +D    +  H + +A +A  R+ ++RR+A++LD   +++ YKA I
Sbjct:  322 QFGFRPGRSTSDLLMLLTGGWQDALDGGLDSVVVALDIAGAFDRVWHGGLLEKLRAKGIQGDLLQLLGDYLQGRTLQVVVNGQASESLPVRASVPQGSVLGPVLWNIYVDDLLRQLPAVSA--YADDCTLSCTYPRHESVRAAEEINQQLGVIQEWGARWQVTFAPEKTQAMVVSRSPAAEPAVEGGLSFGGLPLELQESVKILGVEVDRGLRFDRHVKHIALKASHRVSSLRRVANLLDRRGRLLLYKAQI 571          
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A483AAC8_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=uncultured SUP05 cluster bacterium TaxID=655186 RepID=A0A483AAC8_9GAMM)

HSP 1 Score: 152 bits (384), Expect = 6.530e-40
Identity = 86/251 (34.26%), Postives = 136/251 (54.18%), Query Frame = 1
Query:    4 NQFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTL-----QKDRAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKAFI 741
            +Q GF PG   V+  + + +    AL+  K+VR+V  D   AFD+VW +GLL  L ++G+R      +++YLS+R   VV N  +SS+  I +GVPQG+I  PLLF +FI ++L  +   + LF ADD +L          A+ LNDDL +L+ +  +WL+ F P K++ + I+     +K   P L M   I+    + + LG  +   GNW+ H + + K+A  R+  +R+   +LD       Y  FI
Sbjct:   50 HQSGFTPGDSAVNQLLYITNEFGRALDEGKEVRVVFCDISKAFDRVWHKGLLRKLESIGIRGSLLSWVRNYLSERKQRVVINNSTSSWRDINAGVPQGSILGPLLFIVFINDILTDINSTIKLF-ADDTSLYLIVDDPQETAQTLNDDLVKLHAWSTKWLVNFNPQKTETMTISRKL--NKPHQPNLIMNNTIISTVTEHKHLGLQLSDDGNWNKHIDMITKKAFSRVNILRKFKFILDRKTLETIYITFI 297          
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A0P4VX79_SCYOL (Uncharacterized protein n=1 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VX79_SCYOL)

HSP 1 Score: 153 bits (386), Expect = 1.120e-38
Identity = 90/252 (35.71%), Postives = 140/252 (55.56%), Query Frame = 1
Query:    7 QFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTLQKD-------RAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKAFI 741
            QFGF PG  T D+ +I++     ALE   D  +VALD  GAFD+VW  GL+  L A G++     L++ YL  R L VV NG +S    I++ VPQG++  P+L++++I ++L+++   L   YADD +L +        RA  ELN  L+ + E+G+ W + F P K+Q ++I+ S A        L  G   +  +E ++ LG T+D    +  H  AVA +  +R+ A+RR++  LD    +  YKA I
Sbjct:  476 QFGFRPGRSTADLLLIISKDWQDALEEGLDTLVVALDIAGAFDRVWHAGLVKKLCAKGIQGNLLALLEDYLQGRTLRVVINGQASQPLPIQASVPQGSVLGPILWNIYIDDLLRQIPTLLA--YADDCSLSRSYCRSDSQRAVRELNRQLRLVMEWGEAWQVSFAPEKTQAMVISRSPAASPAVSGCLFFGDQTLPLQEHVKLLGVTVDCGLRFDRHVAAVAHQVSQRVSALRRMSGNLDSRGILTLYKAQI 725          
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: UPI001E1D0EAE (uncharacterized protein LOC123517690 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D0EAE)

HSP 1 Score: 149 bits (376), Expect = 4.030e-38
Identity = 90/250 (36.00%), Postives = 137/250 (54.80%), Query Frame = 1
Query:    7 QFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTLQKD-------RAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKA 735
            QFGF PG    D+ ++L    S AL+  K   +VALD +GAFDKVW  GLLA L A GV      L   YL +R L VV +G  S   ++K+GVPQG+   PLL++++I ++L  +       YADDLTL +          A+ +N     +  +  +W ++F P K+Q  II+ S      T   LS+ G  + ++++++ LG T D    +  H E +A+EA  +L ++RR++ +LDD    + YKA
Sbjct:  282 QFGFRPGRSAADLHLLLTSEWSAALDAGKATAVVALDIEGAFDKVWPAGLLAKLRAAGVDGPILLLFGDYLRERNLKVVIDGQESEQHAVKAGVPQGSCLGPLLWNIYINDLLHLIPSVRA--YADDLTLAQSFSSAEDTATADHMNVTRNSIVSWDSKWQVKFAPNKTQMTIISRSR-----TPLQLSLEGKTIRQQDEMDVLGVTYDFALTFRHHIERLAREASGKLASLRRMSWLLDDKGLEILYKA 524          
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A8J9YV55_BRALA (SLC22A5 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YV55_BRALA)

HSP 1 Score: 150 bits (380), Expect = 6.590e-38
Identity = 95/243 (39.09%), Postives = 133/243 (54.73%), Query Frame = 1
Query:    7 QFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTL--------QKDRAAEELNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAV--AKEARKRLGAIRRIAHMLD 705
            QFGF P   T D+  IL+   S AL+   +VR +ALD KGAFDKVW  GL + L + G+  K    + SYL +R++ VV +G SS+ T I + VP G+I  PLLF ++I ++       L L YADD TL                LN DL+R+  +  +W + FEPTK + + I+      K+    L  G   + EK++LE L  TID +  W+ H   V  A  A +RLGA+RR+AH L+
Sbjct:  645 QFGFRPHQSTADILTILSQHWSNALDRGYEVRHIALDIKGAFDKVWHNGLCSKLKSKGISGKLLTWISSYLLNRSMKVVLSGQSSTTTPINASVPLGSILGPLLFSVYIDDLGDECENPLYL-YADDSTLYCVIRTTNDSSTTTASLNRDLERMRCWAGKWKVTFEPTKCKAMTISRKRCPTKID---LFFGNTKLAEKDELEILRVTIDNKLTWTKHISNVNIAARAGQRLGALRRVAHKLN 883          
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Match: A0A0P4VVV8_SCYOL (Reverse transcriptase domain-containing protein n=2 Tax=Scylla olivacea TaxID=85551 RepID=A0A0P4VVV8_SCYOL)

HSP 1 Score: 150 bits (378), Expect = 1.210e-37
Identity = 88/250 (35.20%), Postives = 140/250 (56.00%), Query Frame = 1
Query:    7 QFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWRGLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGAIWSPLLFDLFIRNVLQRVRKALCLFYADDLTLQKDRAAEE-------LNDDLQRLNEFGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALGFTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKA 735
            QFGF  G    D+ ++L+   S AL+  K   +VALD +GAFDKVW   L   L A+GV     +L ++YL DR L V+ NG  S+   I++GVPQG+   PLL+++++ +++  V  A    +ADD+TL      EE       +N  L R+  +G++W ++F   K+Q+L I     N     P L+  G  +  ++++E LG T D +  +  H E +A+EA  +L ++RRI+++LD     + YKA
Sbjct:  556 QFGFRQGRSAADLHLLLSTEWSGALDQGKTTAVVALDIEGAFDKVWHAALTTKLRAIGVDGALLQLFENYLRDRHLKVIINGRESNPQPIRAGVPQGSCLGPLLWNVYVNDLMHLVPTAKA--FADDITLSHSYGLEEEAAANHDINATLSRVAAWGRKWQVKFAAHKTQQLTI-----NRTSRAPRLTFNGETLTPRDEVEVLGVTYDRKLTFRTHVERLAREASGKLASLRRISYLLDAKGLELLYKA 798          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1168.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y8U8_HETAK3.100e-13792.31Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y8J9_HETAK2.640e-13587.39Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y8N4_HETAK3.620e-10769.92Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y8Z6_HETAK2.640e-5149.58Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0P4VTV9_SCYOL5.420e-4135.32Reverse transcriptase domain-containing protein n=... [more]
A0A483AAC8_9GAMM6.530e-4034.26Reverse transcriptase domain-containing protein n=... [more]
A0A0P4VX79_SCYOL1.120e-3835.71Uncharacterized protein n=1 Tax=Scylla olivacea Ta... [more]
UPI001E1D0EAE4.030e-3836.00uncharacterized protein LOC123517690 n=1 Tax=Portu... [more]
A0A8J9YV55_BRALA6.590e-3839.09SLC22A5 protein n=1 Tax=Branchiostoma lanceolatum ... [more]
A0A0P4VVV8_SCYOL1.210e-3735.20Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1168contigH-akashiwo_Contig1168:243242..244012 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog34740.HMEL012162-PA
Preferred nameGDAP2
PFAMsCRAL_TRIO_2,Macro
Model size744
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0008150,GO:0010033,GO:0032526,GO:0033993,GO:0042221,GO:0050896,GO:1901700
Exons2
Evalue6e-27
EggNOG OGsCOG2110@1|root,KOG1075@1|root,KOG1075@2759|Eukaryota,KOG2633@2759|Eukaryota,38FDD@33154|Opisthokonta,3BB0M@33208|Metazoa,3CW6H@33213|Bilateria,41U7K@6656|Arthropoda,3SI3Z@50557|Insecta,448DX@7088|Lepidoptera
DescriptionDivergent CRAL/TRIO domain
Cds size744
COG categoryBK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387104.1728044-CDS-H-akashiwo_Contig1168:243241..2435801681387104.1728044-CDS-H-akashiwo_Contig1168:243241..243580Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1168 243242..243580 -
1681387104.185987-CDS-H-akashiwo_Contig1168:243607..2440121681387104.185987-CDS-H-akashiwo_Contig1168:243607..244012Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1168 243608..244012 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1168.4.1prot_H-akashiwo_Contig1168.4.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1168 243242..244012 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1168.4.1

>prot_H-akashiwo_Contig1168.4.1 ID=prot_H-akashiwo_Contig1168.4.1|Name=mRNA_H-akashiwo_Contig1168.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=248bp
PNQFGFLPGTGTVDVGVILADRISLALEVRKDVRLVALDFKGAFDKVWWR
GLLAHLWAVGVRSKAFKLMQSYLSDRALFVVANGDSSSYTSIKSGVPQGA
IWSPLLFDLFIRNVLQRVRKALCLFYADDLTLQKDRAAEELNDDLQRLNE
FGKEWLLEFEPTKSQELIITNSAANHKVTHPPLSMGGVIVEEKEQLEALG
FTIDPRGNWSLHAEAVAKEARKRLGAIRRIAHMLDDGAKMMAYKAFI*
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mRNA from alignment at H-akashiwo_Contig1168:243242..244012-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1168.4.1 ID=mRNA_H-akashiwo_Contig1168.4.1|Name=mRNA_H-akashiwo_Contig1168.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=771bp|location=Sequence derived from alignment at H-akashiwo_Contig1168:243242..244012- (Heterosigma akashiwo CCMP452)
CCCAACCAGTTTGGCTTCCTACCTGGTACGGGGACCGTGGATGTCGGCGT CATCCTTGCCGACAGAATCTCCCTGGCCCTTGAAGTCAGGAAAGATGTGC GGTTGGTGGCGCTCGACTTCAAGGGTGCCTTTGATAAGGTGTGGTGGCGG GGTCTTCTTGCTCATCTCTGGGCGGTGGGTGTGCGCTCCAAGGCCTTCAA GCTGATGCAAAGCTACTTGTCAGACCGGGCCCTCTTTGTAGTGGCAAACG GCGACAGCTCCAGTTATACGAGCATCAAGTCTGGGGTGCCGCAGGGGGCC ATCTGGTCGCCTCTCCTCTTTGACCTCTTCATTCGCAACGTTCTACAGCG AGTCAGGAAGGCTCTATGCCTCTTCTACGCAGATGACCTCACCCTCCAGA AGGATGTAGACAGGGAAGAGGGGACGGCGTAGAGGGCGGCAGAGGAGCTG AACGATGATCTGCAGCGCCTCAATGAGTTTGGCAAGGAGTGGCTACTAGA GTTTGAACCTACCAAGTCCCAGGAGCTGATCATCACCAACTCGGCTGCAA ATCACAAGGTGACTCACCCTCCTCTATCCATGGGGGGAGTGATTGTTGAA GAAAAGGAGCAGCTGGAGGCGCTGGGTTTCACCATTGATCCGCGAGGTAA TTGGTCCCTACATGCGGAGGCAGTAGCCAAGGAGGCCCGGAAGAGGCTTG GTGCCATTAGGAGGATCGCCCACATGCTGGATGATGGTGCCAAGATGATG GCCTACAAGGCTTTTATATGA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1168:243242..244012-

>mRNA_H-akashiwo_Contig1168.4.1 ID=mRNA_H-akashiwo_Contig1168.4.1|Name=mRNA_H-akashiwo_Contig1168.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=744bp|location=Sequence derived from alignment at H-akashiwo_Contig1168:243242..244012- (Heterosigma akashiwo CCMP452)
CCCAACCAGTTTGGCTTCCTACCTGGTACGGGGACCGTGGATGTCGGCGT
CATCCTTGCCGACAGAATCTCCCTGGCCCTTGAAGTCAGGAAAGATGTGC
GGTTGGTGGCGCTCGACTTCAAGGGTGCCTTTGATAAGGTGTGGTGGCGG
GGTCTTCTTGCTCATCTCTGGGCGGTGGGTGTGCGCTCCAAGGCCTTCAA
GCTGATGCAAAGCTACTTGTCAGACCGGGCCCTCTTTGTAGTGGCAAACG
GCGACAGCTCCAGTTATACGAGCATCAAGTCTGGGGTGCCGCAGGGGGCC
ATCTGGTCGCCTCTCCTCTTTGACCTCTTCATTCGCAACGTTCTACAGCG
AGTCAGGAAGGCTCTATGCCTCTTCTACGCAGATGACCTCACCCTCCAGA
AGGATAGGGCGGCAGAGGAGCTGAACGATGATCTGCAGCGCCTCAATGAG
TTTGGCAAGGAGTGGCTACTAGAGTTTGAACCTACCAAGTCCCAGGAGCT
GATCATCACCAACTCGGCTGCAAATCACAAGGTGACTCACCCTCCTCTAT
CCATGGGGGGAGTGATTGTTGAAGAAAAGGAGCAGCTGGAGGCGCTGGGT
TTCACCATTGATCCGCGAGGTAATTGGTCCCTACATGCGGAGGCAGTAGC
CAAGGAGGCCCGGAAGAGGCTTGGTGCCATTAGGAGGATCGCCCACATGC
TGGATGATGGTGCCAAGATGATGGCCTACAAGGCTTTTATATGA
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