mRNA_H-akashiwo_Contig1168.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1168.1.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 184 bits (467), Expect = 1.780e-54 Identity = 89/157 (56.69%), Postives = 116/157 (73.89%), Query Frame = 1
Query: 4 FIKDALVKFGFEHCLPASTPMDNTVDLPVTKEYKAHPDDVARFKSMVGTLAWVSTSWSVPEITFAVHKLQRATNYPGPEHFAAAARVFKYLKGAGHKALRIGGGTILRAYCDADFINDQLDGKSVTGYIIFLGDSPISWTSQLQKSVSNSTTEAEYL 474
FIKDAL KFG ++ TP+D+TVDL T +KA D ++SMVGTLAWV+ +W+ PE+ F VHKLQR P P+HF A R F+YLKG ++LR+GG +LRA+ D+DF ND++DGKSVTGYI+FLGD+PI W+S+LQ +V+ ST EAEYL
Sbjct: 93 FIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVA-NWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYL 248
BLAST of mRNA_H-akashiwo_Contig1168.1.1 vs. uniprot
Match: A0A507DKM5_9FUNG (DNA-directed DNA polymerase (Fragment) n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DKM5_9FUNG) HSP 1 Score: 110 bits (276), Expect = 4.510e-26 Identity = 61/161 (37.89%), Postives = 98/161 (60.87%), Query Frame = 1
Query: 4 FIKDALVKFGFEHCLPASTPMDNTVDLPVTKEY-KAHPD-DVARFKSMVGTLAWVSTSWSVPEITFAVHKLQRATNYPGPEHFAAAARVFKYLKGAGHKALRIGGGTI-LRAYCDADFINDQLDGKSVTGYIIFLGDS-PISWTSQLQKSVSNSTTEAEYL 474
++ D L +FG + C P +TPMD T P E K P+ ++ +VG+L ++ + P+I AV L R + P P+H AA RV +YL+G +L IGG + L Y DAD+ N+ +D +S+TGY+ ++G++ P++W S+ Q +V+ S+TEAEY+
Sbjct: 108 YVNDILERFGMQDCKPVNTPMDRTKLEPYEVENTKTSPNPQEGEYRKIVGSLVYLMIC-TRPDIAVAVSMLSRFASNPSPQHLQAAKRVLRYLRGTSDYSLCIGGNNVTLHGYSDADWGNNIIDRRSITGYLFYIGNAGPVTWASKRQPTVALSSTEAEYM 267
BLAST of mRNA_H-akashiwo_Contig1168.1.1 vs. uniprot
Match: A0A1S3Z698_TOBAC (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S3Z698_TOBAC) HSP 1 Score: 105 bits (262), Expect = 1.630e-25 Identity = 58/158 (36.71%), Postives = 91/158 (57.59%), Query Frame = 1
Query: 1 QFIKDALVKFGFEHCLPASTPMDNTVDLPVTKEYKAHPDDVARFKSMVGTLAWVSTSWSVPEITFAVHKLQRATNYPGPEHFAAAARVFKYLKGAGHKALRIG--GGTILRAYCDADFINDQLDGKSVTGYIIFLGDSPISWTSQLQKSVSNSTTEAE 468
+++KD L C A TPM +T ++E D ++ ++G L ++S ++ P+I FAV KL + + PG H+ R+ +YL H +++ T L AY D+D+ D D S+TGY+++LGDSPISW+S+ Q+SVS S+TEAE
Sbjct: 41 KYVKDLLQDVNMAECKGAPTPMTSTCTFETSREDSKV--DGTLYRRVIGKLHYLS--FTRPDIAFAVSKLSQFMHQPGVSHWKTVKRLLRYLCHTAHLGIKLAKKSATQLVAYSDSDWAGDPFDRTSITGYVVYLGDSPISWSSKKQRSVSRSSTEAE 194
BLAST of mRNA_H-akashiwo_Contig1168.1.1 vs. uniprot
Match: A0A6P5RM83_PRUAV (uncharacterized protein LOC110747981 n=2 Tax=Prunus TaxID=3754 RepID=A0A6P5RM83_PRUAV) HSP 1 Score: 109 bits (272), Expect = 1.920e-25 Identity = 67/161 (41.61%), Postives = 94/161 (58.39%), Query Frame = 1
Query: 1 QFIKDALVKFGFEHCLPASTPMDNTVDLPVTKEYK--AHP-DDVARFKSMVGTLAWVSTSWSVPEITFAVHKLQRATNYPGPEHFAAAARVFKYLKGA-GHKALRIGGGTILRAYCDADFINDQLDGKSVTGYIIFLGDSPISWTSQLQKSVSNSTTEAEY 471
++ D L+K G C P STP LP TK +K P D ++S+VG L +++ +S P+I FAV+ L + + P HFAA RV +YL G H G L+AY DAD+ D D +S TGY++FLG++PISW ++ Q +VS S+TEAEY
Sbjct: 103 KYATDLLIKAGMTQCKPCSTPC-----LPTTKLFKFDGKPLSDPTLYRSLVGGLQYLT--FSRPDIAFAVNTLCQFMHTPTDTHFAAVKRVLRYLAGTLTHGIHFTSGDAHLQAYSDADWAGDVNDRRSTTGYVVFLGNNPISWCAKKQSTVSRSSTEAEY 256
BLAST of mRNA_H-akashiwo_Contig1168.1.1 vs. uniprot
Match: A0A2N9GN02_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GN02_FAGSY) HSP 1 Score: 109 bits (273), Expect = 5.130e-25 Identity = 59/158 (37.34%), Postives = 99/158 (62.66%), Query Frame = 1
Query: 1 QFIKDALVKFGFEHCLPASTPMDNTVDLPVTKEYKAHPDDVARFKSMVGTLAWVSTSWSVPEITFAVHKLQRATNYPGPEHFAAAARVFKYLKGAGHKALRIGGGTI-LRAYCDADFINDQLDGKSVTGYIIFLGDSPISWTSQLQKSVSNSTTEAEY 471
++ D L +F +C P+STP +T L TK+ D F+S+VG L +++ ++ P+++FAV+++ + + P H AA R+ +Y+KG+ L G++ L+AY DAD+ D +D +S +GY++FLG +PI+W S+ Q +VS S+TEAEY
Sbjct: 275 KYASDLLQRFDMTNCKPSSTPYSSTSRL--TKDQGTPLVDPTSFRSLVGALQYLT--FTRPDLSFAVNQVCQFMHSPTDTHLIAAKRILRYIKGSLSSGLLFQPGSLNLQAYADADWAGDPIDRRSTSGYVVFLGSTPITWVSKKQCTVSRSSTEAEY 428
BLAST of mRNA_H-akashiwo_Contig1168.1.1 vs. uniprot
Match: A0A2N9HLR0_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HLR0_FAGSY) HSP 1 Score: 109 bits (273), Expect = 7.530e-25 Identity = 59/158 (37.34%), Postives = 99/158 (62.66%), Query Frame = 1
Query: 1 QFIKDALVKFGFEHCLPASTPMDNTVDLPVTKEYKAHPDDVARFKSMVGTLAWVSTSWSVPEITFAVHKLQRATNYPGPEHFAAAARVFKYLKGAGHKALRIGGGTI-LRAYCDADFINDQLDGKSVTGYIIFLGDSPISWTSQLQKSVSNSTTEAEY 471
++ D L +F +C P+STP +T L TK+ D F+S+VG L +++ ++ P+++FAV+++ + + P H AA R+ +Y+KG+ L G++ L+AY DAD+ D +D +S +GY++FLG +PI+W S+ Q +VS S+TEAEY
Sbjct: 682 KYASDLLQRFAMTNCKPSSTPYSSTSRL--TKDQGTPLVDPTSFRSLVGALQYLT--FTRPDLSFAVNQVCQFMHSPTDTHLIAAKRILRYVKGSLSSGLLFQPGSLNLQAYADADWAGDPIDRRSTSGYVVFLGSTPITWVSKKQCTVSRSSTEAEY 835
BLAST of mRNA_H-akashiwo_Contig1168.1.1 vs. uniprot
Match: A0A2N9F8I7_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F8I7_FAGSY) HSP 1 Score: 109 bits (273), Expect = 7.740e-25 Identity = 59/158 (37.34%), Postives = 99/158 (62.66%), Query Frame = 1
Query: 1 QFIKDALVKFGFEHCLPASTPMDNTVDLPVTKEYKAHPDDVARFKSMVGTLAWVSTSWSVPEITFAVHKLQRATNYPGPEHFAAAARVFKYLKGAGHKALRIGGGTI-LRAYCDADFINDQLDGKSVTGYIIFLGDSPISWTSQLQKSVSNSTTEAEY 471
++ D L +F +C P+STP +T L TK+ D F+S+VG L +++ ++ P+++FAV+++ + + P H AA R+ +Y+KG+ L G++ L+AY DAD+ D +D +S +GY++FLG +PI+W S+ Q +VS S+TEAEY
Sbjct: 998 KYASDLLQRFAMTNCKPSSTPYSSTSRL--TKDQGTPLVDPTSFRSLVGALQYLT--FTRPDLSFAVNQVCQFMHSPTDTHLIAAKRILRYVKGSLSSGLLFQPGSLNLQAYADADWAGDPIDRRSTSGYVVFLGSTPITWVSKKQCTVSRSSTEAEY 1151
BLAST of mRNA_H-akashiwo_Contig1168.1.1 vs. uniprot
Match: A0A507DR08_9FUNG (DNA-directed DNA polymerase (Fragment) n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DR08_9FUNG) HSP 1 Score: 108 bits (269), Expect = 2.570e-24 Identity = 61/161 (37.89%), Postives = 97/161 (60.25%), Query Frame = 1
Query: 4 FIKDALVKFGFEHCLPASTPMDNTVDLPVTKEY-KAHPD-DVARFKSMVGTLAWVSTSWSVPEITFAVHKLQRATNYPGPEHFAAAARVFKYLKGAGHKALRIGGGTI-LRAYCDADFINDQLDGKSVTGYIIFLGDS-PISWTSQLQKSVSNSTTEAEYL 474
++ D L +FG + C P +TPMD T P E K P+ ++ +VG+L ++ + P+I AV L R + P P+H AA RV +YL+G +L IGG + L Y DAD+ N+ +D +S+TGY+ +G++ P++W S+ Q +V+ S+TEAEY+
Sbjct: 477 YVNDILERFGMQDCKPVNTPMDQTKLEPYEVENTKTSPNPQEGEYREIVGSLMYLMIC-TRPDIAVAVSMLSRFASNPSPQHLQAAKRVLRYLRGTSTYSLCIGGNNVTLHGYSDADWGNNIIDRRSITGYLFCIGNAGPVTWASKRQPTVALSSTEAEYM 636
BLAST of mRNA_H-akashiwo_Contig1168.1.1 vs. uniprot
Match: A0A1U8Q732_NELNU (uncharacterized protein LOC109115255 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8Q732_NELNU) HSP 1 Score: 105 bits (263), Expect = 5.340e-24 Identity = 61/159 (38.36%), Postives = 90/159 (56.60%), Query Frame = 1
Query: 1 QFIKDALVKFGFEHCLPASTPMDNTVDLPVTKEYKAHPDDVARFKSMVGTLAWVSTSWSVPEITFAVHKLQRATNYPGPEHFAAAARVFKYLKGAGHKALRIGGGT--ILRAYCDADFINDQLDGKSVTGYIIFLGDSPISWTSQLQKSVSNSTTEAEY 471
++I D L K G + C STPM+ L D AR++ +VG L +++ +W PE++F VH L + + P EH AA +V +YLK + + ILR +CD+D+ + L +S TGYI LG+SPISW ++ Q +VS S+TEAEY
Sbjct: 246 KYIMDILTKTGMQDCKLCSTPMEQQKHLIGYSNLLL--SDPARYRKLVGRLVYLTITW--PELSFDVHTLSQFMHEPHQEHLDAAIQVVRYLKDTPTHGVLLSSTNDFILRGFCDSDWASCPLTRRSTTGYITMLGESPISWKTKKQHTVSRSSTEAEY 400
BLAST of mRNA_H-akashiwo_Contig1168.1.1 vs. uniprot
Match: UPI001F05A804 (secreted RxLR effector protein 161-like n=1 Tax=Lucilia cuprina TaxID=7375 RepID=UPI001F05A804) HSP 1 Score: 102 bits (255), Expect = 7.680e-24 Identity = 58/160 (36.25%), Postives = 94/160 (58.75%), Query Frame = 1
Query: 1 QFIKDALVKFGFEHCLPASTPMDNTVDLPVT-KEYKAHPDDVARFKSMVGTLAWVSTSWSVPEITFAVHKLQRATNYPGPEHFAAAARVFKYLKGAGHKALRIGGG-TILRAYCDADFINDQLDGKSVTGYIIFLGDSPISWTSQLQKSVSNSTTEAEYL 474
Q+IKD L ++G E+C +TP++ + T + K P ++S++G L ++S + + P+I +V KL + + P EH A R+ +YLKG + L G T + + DAD+ D LD KS TG++ F+G+ P+SW S+ Q V+ S+TEAEY+
Sbjct: 67 QYIKDLLQEYGMENCKAVATPLETNHQVNCTGQNCKEIPQ--RDYQSIIGALMYLSIT-TRPDILHSVAKLAQRNSNPHEEHMQAVKRILRYLKGTVNMKLEYTAGETSIEGFVDADWGGDNLDRKSYTGFVFFIGNCPVSWQSKKQSCVALSSTEAEYM 223 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1168.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1168.1.1 >prot_H-akashiwo_Contig1168.1.1 ID=prot_H-akashiwo_Contig1168.1.1|Name=mRNA_H-akashiwo_Contig1168.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=159bp QFIKDALVKFGFEHCLPASTPMDNTVDLPVTKEYKAHPDDVARFKSMVGTback to top mRNA from alignment at H-akashiwo_Contig1168:27123..27599+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1168.1.1 ID=mRNA_H-akashiwo_Contig1168.1.1|Name=mRNA_H-akashiwo_Contig1168.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=477bp|location=Sequence derived from alignment at H-akashiwo_Contig1168:27123..27599+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1168:27123..27599+ >mRNA_H-akashiwo_Contig1168.1.1 ID=mRNA_H-akashiwo_Contig1168.1.1|Name=mRNA_H-akashiwo_Contig1168.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=477bp|location=Sequence derived from alignment at H-akashiwo_Contig1168:27123..27599+ (Heterosigma akashiwo CCMP452)back to top |