mRNA_H-akashiwo_Contig1162.4.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1162.4.1 vs. uniprot
Match: L0DJ94_SINAD (Pyridoxamine 5''-phosphate oxidase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) TaxID=886293 RepID=L0DJ94_SINAD) HSP 1 Score: 97.1 bits (240), Expect = 2.350e-23 Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 7 LAGPSKGLFCYLDLGGSGVETPAHLRENGRVTVMFCAFAGPPKILRLYGRGWCLEPGAPGWDDVLAEFPAEALAR 231
+ GP YLDL GSG+ET AHLR+NGR+T+MFCA G P ILRLYG+G +EPG PGWDD++A FP R
Sbjct: 47 ILGPKT--VAYLDLVGSGIETLAHLRQNGRLTLMFCALEGRPLILRLYGKGRAVEPGEPGWDDLVANFPPHPATR 119
BLAST of mRNA_H-akashiwo_Contig1162.4.1 vs. uniprot
Match: A0A2W6CKV5_9ACTN (Pyridoxamine 5'-phosphate oxidase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A2W6CKV5_9ACTN) HSP 1 Score: 96.3 bits (238), Expect = 4.470e-23 Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 1
Query: 34 CYLDLGGSGVETPAHLRENGRVTVMFCAFAGPPKILRLYGRGWCLEPGAPGWDDVLAEFPAEALARFPPEKLRNAVL 264
YLDL GSGVET AH++ENGR+T MFCAF GPP+ILRLYGRG L+PG G++D+L RFPPE+ AV+
Sbjct: 55 AYLDLTGSGVETIAHIQENGRITFMFCAFEGPPRILRLYGRGEVLQPGDSGFEDLLG--------RFPPEEGTRAVI 123
BLAST of mRNA_H-akashiwo_Contig1162.4.1 vs. uniprot
Match: A0A1N6DLM1_9BACT (Pyridoxamine 5'-phosphate oxidase n=1 Tax=Singulisphaera sp. GP187 TaxID=1882752 RepID=A0A1N6DLM1_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 6.620e-23 Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 7 LAGPSKGLFCYLDLGGSGVETPAHLRENGRVTVMFCAFAGPPKILRLYGRGWCLEPGAPGWDDVLAEFPAEALAR 231
+ GP YLDL GSG+ET AHLR+NGR+T+MFCA G P ILRLYG+G +EPG PGWDD+L FP R
Sbjct: 47 ILGPKS--VAYLDLIGSGIETLAHLRQNGRLTLMFCALEGRPLILRLYGQGRAVEPGEPGWDDLLTHFPHHPATR 119
BLAST of mRNA_H-akashiwo_Contig1162.4.1 vs. uniprot
Match: A0A3D0I9V1_9DELT (Pyridoxamine 5'-phosphate oxidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D0I9V1_9DELT) HSP 1 Score: 95.5 bits (236), Expect = 1.100e-22 Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 34 CYLDLGGSGVETPAHLRENGRVTVMFCAFAGPPKILRLYGRGWCLEPGAPGWDDVLAEFPAEALAR 231
YLDL GSG+ET AHLRENGR+T+MFCAF GPPKILRL+GRG +EPG W+ + A FP AR
Sbjct: 54 AYLDLTGSGIETVAHLRENGRITLMFCAFEGPPKILRLHGRGEVIEPGHAEWEALAARFPPHPGAR 119
BLAST of mRNA_H-akashiwo_Contig1162.4.1 vs. uniprot
Match: A0A5B9WAN7_9BACT (Pyridoxamine 5'-phosphate oxidase n=1 Tax=Aquisphaera giovannonii TaxID=406548 RepID=A0A5B9WAN7_9BACT) HSP 1 Score: 92.8 bits (229), Expect = 9.810e-22 Identity = 42/75 (56.00%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 7 LAGPSKGLFCYLDLGGSGVETPAHLRENGRVTVMFCAFAGPPKILRLYGRGWCLEPGAPGWDDVLAEFPAEALAR 231
+ GP++ YLDL GSG+ET AHLRENGR+T+MFCAF G P I+RLYG+G +EP GWD ++ FP AR
Sbjct: 47 ILGPTQ--VAYLDLTGSGIETVAHLRENGRITIMFCAFEGRPLIVRLYGKGRVVEPSDAGWDGLIGAFPPHPGAR 119
BLAST of mRNA_H-akashiwo_Contig1162.4.1 vs. uniprot
Match: A0A2D5Z1M2_9BACT (Pyridoxamine 5'-phosphate oxidase n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2D5Z1M2_9BACT) HSP 1 Score: 92.4 bits (228), Expect = 1.200e-21 Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 1
Query: 31 FCYLDLGGSGVETPAHLRENGRVTVMFCAFAGPPKILRLYGRGWCLEPGAPGWDDVLAEFP 213
YLDL GSG+ET AHL++NGR+ MFCAF GPP+ILRLYGRG LEPG P ++ +L EFP
Sbjct: 47 IAYLDLMGSGIETVAHLKDNGRIVFMFCAFQGPPRILRLYGRGEALEPGHPEFEALLREFP 107
BLAST of mRNA_H-akashiwo_Contig1162.4.1 vs. uniprot
Match: UPI001F1318E6 (pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Pseudonocardia alaniniphila TaxID=75291 RepID=UPI001F1318E6) HSP 1 Score: 92.4 bits (228), Expect = 1.710e-21 Identity = 47/79 (59.49%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 31 FCYLDLGGSGVETPAHLRENGRVTVMFCAFAGPPKILRLYGRGWCLEPGAPGWDDVLAEFPAEALARFPPEKLRNAVLV 267
F YLDL GSGVET AHLRENGR+ VMFCAF G P I+RL+G G + PG PG+D+VLA F E R P LR ++V
Sbjct: 54 FAYLDLTGSGVETIAHLRENGRICVMFCAFDGRPSIVRLHGTGRAVTPGDPGFDEVLAGFGEEGEQRRP--YLRAVIVV 130
BLAST of mRNA_H-akashiwo_Contig1162.4.1 vs. uniprot
Match: A0A2N2ADN6_9GAMM (Pyridoxamine 5'-phosphate oxidase n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-1 TaxID=2013791 RepID=A0A2N2ADN6_9GAMM) HSP 1 Score: 90.9 bits (224), Expect = 5.030e-21 Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 7 LAGPSKGLFCYLDLGGSGVETPAHLRENGRVTVMFCAFAGPPKILRLYGRGWCLEPGAPGWDDVLAEFP 213
+ GP + +LDL GSG E+ AHL ENGRVTVMFCAFAGPP+ILRLYGRG + PG+ WD + +FP
Sbjct: 47 VLGPHE--VAWLDLTGSGNESAAHLAENGRVTVMFCAFAGPPRILRLYGRGTVVLPGSAAWDSLRPQFP 113
BLAST of mRNA_H-akashiwo_Contig1162.4.1 vs. uniprot
Match: A0A846F9L7_9CYAN (Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846F9L7_9CYAN) HSP 1 Score: 90.5 bits (223), Expect = 7.110e-21 Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 34 CYLDLGGSGVETPAHLRENGRVTVMFCAFAGPPKILRLYGRGWCLEPGAPGWDDVLAEFPAEALAR 231
YLDL GSG+ET AHLRENGR+T+MFCAF G PKILRLYG G E G+PG++ + + FP AR
Sbjct: 54 AYLDLAGSGIETVAHLRENGRITIMFCAFEGAPKILRLYGEGEVHEKGSPGYEALKSNFPPYEGAR 119
BLAST of mRNA_H-akashiwo_Contig1162.4.1 vs. uniprot
Match: A0A6G0A4X1_9ACTN (Pyridoxamine 5'-phosphate oxidase family protein n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A4X1_9ACTN) HSP 1 Score: 90.5 bits (223), Expect = 7.800e-21 Identity = 42/75 (56.00%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 7 LAGPSKGLFCYLDLGGSGVETPAHLRENGRVTVMFCAFAGPPKILRLYGRGWCLEPGAPGWDDVLAEFPAEALAR 231
+ GP+ YLDL GSGVET AH+R+NGRVT+MFCAF GPP++LRLYG G + P PG D++L FP R
Sbjct: 47 VLGPTT--VAYLDLTGSGVETIAHIRQNGRVTIMFCAFEGPPRVLRLYGSGEVIRPDDPGSDELLRLFPGHGGVR 119 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1162.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1162.4.1 >prot_H-akashiwo_Contig1162.4.1 ID=prot_H-akashiwo_Contig1162.4.1|Name=mRNA_H-akashiwo_Contig1162.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=89bp HPLAGPSKGLFCYLDLGGSGVETPAHLRENGRVTVMFCAFAGPPKILRLYback to top mRNA from alignment at H-akashiwo_Contig1162:154073..154644- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1162.4.1 ID=mRNA_H-akashiwo_Contig1162.4.1|Name=mRNA_H-akashiwo_Contig1162.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=572bp|location=Sequence derived from alignment at H-akashiwo_Contig1162:154073..154644- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1162:154073..154644- >mRNA_H-akashiwo_Contig1162.4.1 ID=mRNA_H-akashiwo_Contig1162.4.1|Name=mRNA_H-akashiwo_Contig1162.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=267bp|location=Sequence derived from alignment at H-akashiwo_Contig1162:154073..154644- (Heterosigma akashiwo CCMP452)back to top |