mRNA_H-akashiwo_Contig116.4.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig116.4.1
Unique NamemRNA_H-akashiwo_Contig116.4.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig116.4.1 vs. uniprot
Match: A0A7S3XKW1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKW1_HETAK)

HSP 1 Score: 118 bits (296), Expect = 9.300e-32
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 
Query:    1 SIVAGDYTFEPATWDGISAPGKDIVRRLLTVDPTRRLTARGVLEHPWVRGAVLEP 165
            SIVAGDYTFEPATWDGISAPGKDIVRRLLTVDPTRRLTARGVLEHPWVRGAVLEP
Sbjct:  188 SIVAGDYTFEPATWDGISAPGKDIVRRLLTVDPTRRLTARGVLEHPWVRGAVLEP 242
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BLAST of mRNA_H-akashiwo_Contig116.4.1 vs. uniprot
Match: A0A5A8DF38_CAFRO (Uncharacterized protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8DF38_CAFRO)

HSP 1 Score: 69.7 bits (169), Expect = 1.510e-12
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 1 
Query:    4 IVAGDYTFEPATWDGISAPGKDIVRRLLTVDPTRRLTARGVLEHPWVRGAV 156
            I A  + F+   WDG+S+  KD++ RLL VDPTRRLTAR VL HPW+ G V
Sbjct:  687 IRAAKFRFDSPAWDGVSSAAKDLIARLLVVDPTRRLTAREVLRHPWITGTV 737
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BLAST of mRNA_H-akashiwo_Contig116.4.1 vs. uniprot
Match: UPI001B887D50 (calcium/calmodulin-dependent protein kinase type IV-like isoform X2 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B887D50)

HSP 1 Score: 68.9 bits (167), Expect = 2.330e-12
Identity = 26/50 (52.00%), Postives = 38/50 (76.00%), Query Frame = 1 
Query:    1 SIVAGDYTFEPATWDGISAPGKDIVRRLLTVDPTRRLTARGVLEHPWVRG 150
            +++ G YTF+   WD IS   KD+V+RLLT+DP +R+TA+  L+HPWV+G
Sbjct:  230 NVIKGKYTFDEIYWDDISKNAKDLVKRLLTLDPKKRITAKSALQHPWVKG 279
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BLAST of mRNA_H-akashiwo_Contig116.4.1 vs. uniprot
Match: UPI001B88CA32 (calcium/calmodulin-dependent protein kinase type IV-like isoform X1 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88CA32)

HSP 1 Score: 68.9 bits (167), Expect = 2.460e-12
Identity = 26/50 (52.00%), Postives = 38/50 (76.00%), Query Frame = 1 
Query:    1 SIVAGDYTFEPATWDGISAPGKDIVRRLLTVDPTRRLTARGVLEHPWVRG 150
            +++ G YTF+   WD IS   KD+V+RLLT+DP +R+TA+  L+HPWV+G
Sbjct:  230 NVIKGKYTFDEIYWDDISKNAKDLVKRLLTLDPKKRITAKSALQHPWVKG 279
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BLAST of mRNA_H-akashiwo_Contig116.4.1 vs. uniprot
Match: A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.360e-12
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 1 
Query:    4 IVAGDYTFEPATWDGISAPGKDIVRRLLTVDPTRRLTARGVLEHPWVRGA 153
            I AGD+ F P  WD +S   KD++R+LLTVDP +R+TA   ++HPWV GA
Sbjct:  239 IRAGDFVFHPEYWDPVSEEAKDLIRKLLTVDPNKRITAAEAMQHPWVTGA 288
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BLAST of mRNA_H-akashiwo_Contig116.4.1 vs. uniprot
Match: M5E741_MALS4 (Protein kinase domain-containing protein n=2 Tax=Malassezia sympodialis (strain ATCC 42132) TaxID=1230383 RepID=M5E741_MALS4)

HSP 1 Score: 67.4 bits (163), Expect = 8.030e-12
Identity = 28/48 (58.33%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:    4 IVAGDYTFEPAT-WDGISAPGKDIVRRLLTVDPTRRLTARGVLEHPWV 144
            I+AGDY FEPA  W G+S   +D +RRLLTVDP+ R+TA+  L+HPW+
Sbjct:  207 IIAGDYKFEPAIYWQGVSEEARDFIRRLLTVDPSARMTAQEALKHPWL 254
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BLAST of mRNA_H-akashiwo_Contig116.4.1 vs. uniprot
Match: A0A8H7RXX4_9FUNG (Protein kinase domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7RXX4_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 1.170e-11
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 1 
Query:    1 SIVAGDYTFEPATWDGISAPGKDIVRRLLTVDPTRRLTARGVLEHPWVRGAVLEP 165
            +I+  DY+F+   W GIS   KD VRR LT+DPT+R+TA   LEHPW+     +P
Sbjct:   90 AIMHADYSFDEQFWSGISEESKDFVRRCLTIDPTKRITAHEALEHPWLTSERTQP 144
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BLAST of mRNA_H-akashiwo_Contig116.4.1 vs. uniprot
Match: D8LEF0_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF0_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.340e-11
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 1 
Query:    4 IVAGDYTFEPATWDGISAPGKDIVRRLLTVDPTRRLTARGVLEHPWVRGA 153
            I AG Y F+P  W+ +S+  KD++R+LLTVDPTRRLTA    EHPW+  A
Sbjct:  590 IKAGHYRFDPEYWNDVSSEAKDLIRKLLTVDPTRRLTAAEACEHPWLSTA 639
[Close]
BLAST of mRNA_H-akashiwo_Contig116.4.1 vs. uniprot
Match: A0A6F9D921_9ASCI (Calcium/calmodulin-dependent protein kinase type IV-like n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9D921_9ASCI)

HSP 1 Score: 66.6 bits (161), Expect = 1.480e-11
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:    4 IVAGDYTFEPATWDGISAPGKDIVRRLLTVDPTRRLTARGVLEHPWVRG 150
            I+  DY F    WDG+SA  KD+V++LL +DP +RLTAR  L+HPWVRG
Sbjct:  228 ILKCDYEFISPYWDGVSANAKDLVKKLLVLDPKKRLTARQALQHPWVRG 276
[Close]
BLAST of mRNA_H-akashiwo_Contig116.4.1 vs. uniprot
Match: A0A067F9E0_CITSI (Protein kinase domain-containing protein (Fragment) n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067F9E0_CITSI)

HSP 1 Score: 63.5 bits (153), Expect = 3.180e-11
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:    1 SIVAGDYTFEPATWDGISAPGKDIVRRLLTVDPTRRLTARGVLEHPWVR 147
            +I+ GD  FE A W  IS+  KD+VRR+LT DP +R+T+  VLEHPW++
Sbjct:   56 AILQGDIDFESAPWPTISSSAKDLVRRMLTQDPKKRITSAQVLEHPWIK 104
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig116.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XKW1_HETAK9.300e-32100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5A8DF38_CAFRO1.510e-1256.86Uncharacterized protein n=4 Tax=Sar TaxID=2698737 ... [more]
UPI001B887D502.330e-1252.00calcium/calmodulin-dependent protein kinase type I... [more]
UPI001B88CA322.460e-1252.00calcium/calmodulin-dependent protein kinase type I... [more]
A0A7S2XV40_9STRA3.360e-1254.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
M5E741_MALS48.030e-1258.33Protein kinase domain-containing protein n=2 Tax=M... [more]
A0A8H7RXX4_9FUNG1.170e-1149.09Protein kinase domain-containing protein n=1 Tax=M... [more]
D8LEF0_ECTSI1.340e-1156.00Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpu... [more]
A0A6F9D921_9ASCI1.480e-1157.14Calcium/calmodulin-dependent protein kinase type I... [more]
A0A067F9E0_CITSI3.180e-1153.06Protein kinase domain-containing protein (Fragment... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig116contigH-akashiwo_Contig116:40150..41336 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog51511.ENSCSAVP00000003113
Preferred nameCAMK4
PFAMsPkinase
Model size169
Max annot lvl33208|Metazoa
KEGG koko:K05869
KEGG Pathwayko04020,ko04024,ko04211,ko04371,ko04380,ko04720,ko04722,ko04725,ko04921,ko04925,ko05031,ko05034,map04020,map04024,map04211,map04371,map04380,map04720,map04722,map04725,map04921,map04925,map05031,map05034
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0001650,GO:0001773,GO:0001775,GO:0002274,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002694,GO:0002761,GO:0003008,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006913,GO:0007154,GO:0007165,GO:0007267,GO:0007268,GO:0007270,GO:0007275,GO:0007610,GO:0007611,GO:0007613,GO:0007616,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009931,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010857,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019222,GO:0019538,GO:0023052,GO:0030097,GO:0030099,GO:0030154,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0033081,GO:0033157,GO:0035556,GO:0036211,GO:0043011,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0045321,GO:0045580,GO:0045595,GO:0045619,GO:0045637,GO:0045670,GO:0045893,GO:0045935,GO:0046777,GO:0046822,GO:0046824,GO:0046825,GO:0046827,GO:0046907,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050877,GO:0050890,GO:0050896,GO:0051049,GO:0051050,GO:0051169,GO:0051171,GO:0051173,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051249,GO:0051252,GO:0051254,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060341,GO:0065007,GO:0070013,GO:0070201,GO:0071704,GO:0080090,GO:0090087,GO:0090316,GO:0097028,GO:0098916,GO:0099536,GO:0099537,GO:0140096,GO:1901564,GO:1902105,GO:1902680,GO:1903506,GO:1903508,GO:1903706,GO:1903827,GO:1903829,GO:1904951,GO:2000026,GO:2000112,GO:2001141
Exons2
Evalue1.1e-11
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota,38DCI@33154|Opisthokonta,3BIMD@33208|Metazoa,3CVD5@33213|Bilateria,482M7@7711|Chordata
EC2.7.11.17
Descriptioncalcium-dependent protein serine/threonine kinase activity
Cds size165
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387102.0046031-CDS-H-akashiwo_Contig116:40149..402081681387102.0046031-CDS-H-akashiwo_Contig116:40149..40208Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig116 40150..40208 +
1681387102.0198665-CDS-H-akashiwo_Contig116:41228..413341681387102.0198665-CDS-H-akashiwo_Contig116:41228..41334Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig116 41229..41334 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig116.4.1prot_H-akashiwo_Contig116.4.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig116 40150..41334 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig116.4.1

>prot_H-akashiwo_Contig116.4.1 ID=prot_H-akashiwo_Contig116.4.1|Name=mRNA_H-akashiwo_Contig116.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=55bp
SIVAGDYTFEPATWDGISAPGKDIVRRLLTVDPTRRLTARGVLEHPWVRG
AVLEP
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mRNA from alignment at H-akashiwo_Contig116:40150..41336+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig116.4.1 ID=mRNA_H-akashiwo_Contig116.4.1|Name=mRNA_H-akashiwo_Contig116.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1187bp|location=Sequence derived from alignment at H-akashiwo_Contig116:40150..41336+ (Heterosigma akashiwo CCMP452)
TCGATCGTGGCGGGGGACTACACCTTTGAGCCCGCCACCTGGGACGGCAT
CTCCGCCCCGTGGGCCCTCTGCCCCTCCCCCCCCCTCCGCCTTCATTTCA
TTGTCCAAGGCAGAAAAAAGAAAAAACCTGTTGTGGTTGTCTATTATTGG
TGGTGTGTTGTGTTATAAGTATAGTATAGGGAGTTGAGTAAGAGAAGAAC
TCTTACGACTACATAGCATGAGTGCAGTATCGGCAAAAAACAAATAGCCC
ACCAGCCCACTGCTCTCAAGTCAGTTATCCCTGAATGATTGTGGTAGACA
GAGGTAGAAATACTTCTAATAGCACGCTGGGAGAAGTATTTTGGGGGGTT
TGATGCGAACATTCTCCCCCTTCCCTTCCTTTCAAACCTTTTCCCTCCTA
CCCTCCCCGACTTGATGTAGCGAAAATTCTCCCCCTTTTCTTCTGTTCCG
CGCCCCTCCCCCACTTCCCTTCCCGGCTTGATGTGAAAGTCCTCTCTCGT
TCCCTGTCTTTCCACACACACATCTCTCTCCATTCATCAATTACAACAGA
AAAAACGTACTCAGAATCTCTCAGCAGTGCAGCTCAGCCTTCTTGACTGA
AGTACTCGCTGAGGGGGAGTATTGATGTGTAAATCCTGAGTACACACGAT
GTCCGACGGGCCCGCCCCGGACCGCACGGGGGCCGCCCGGAGGACGAAGG
CGGCACCGGCCGCTGATGGCTATGTGTACGGCCCGATGCCAGTTTTGGAG
GGAGAAGTGCCCTAATGTGTCTGACACAATAGGTCCAATGGAATGTAGTA
TAGATATGGGTCCTAATTATTTTTCAGCGCCCTTTTTTTTTTTTTTTTTC
AGCACCTTTGGTATATACAATAGGTCCTCCAGGTGACACCAAAAAAGTCA
TTTAGTGGGTCCTCCTCAGTTGCCACACACACACAGACACCCTCCCCCAT
TCCCGACCGCTGCCCCGGCCCTCACCCTGGTCACCGCCCGCTCCCGCCCC
GCCCGCCCCCACCGCCCCAAACTGCGGCCCCCGCCGCCGGCCGCCGCTGC
CGCCGCCGCCCCGCCCCCGCCCCGCCCAGGGGCAAGGACATTGTGCGCCG
GCTGCTGACGGTGGACCCCACGCGGCGGCTGACCGCGCGCGGCGTGCTGG
AGCACCCCTGGGTGCGGGGCGCGGTGCTCGAGCCGGG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig116:40150..41336+

>mRNA_H-akashiwo_Contig116.4.1 ID=mRNA_H-akashiwo_Contig116.4.1|Name=mRNA_H-akashiwo_Contig116.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=165bp|location=Sequence derived from alignment at H-akashiwo_Contig116:40150..41336+ (Heterosigma akashiwo CCMP452)
TCGATCGTGGCGGGGGACTACACCTTTGAGCCCGCCACCTGGGACGGCAT
CTCCGCCCCGGGCAAGGACATTGTGCGCCGGCTGCTGACGGTGGACCCCA
CGCGGCGGCTGACCGCGCGCGGCGTGCTGGAGCACCCCTGGGTGCGGGGC
GCGGTGCTCGAGCCG
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