mRNA_H-akashiwo_Contig116.24.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig116.24.1
Unique NamemRNA_H-akashiwo_Contig116.24.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig116.24.1 vs. uniprot
Match: A0A6V1NZ18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZ18_HETAK)

HSP 1 Score: 694 bits (1792), Expect = 8.320e-253
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 1
Query:    1 MAMEEGNTSRKPEIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYSNKVRIIQKAENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNITGNSEEPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMPQPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV 1011
            MAMEEGNTSRKPEIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYSNKVRIIQKAENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNITGNSEEPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMPQPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV
Sbjct:   10 MAMEEGNTSRKPEIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYSNKVRIIQKAENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNITGNSEEPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMPQPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV 346          
BLAST of mRNA_H-akashiwo_Contig116.24.1 vs. uniprot
Match: A0A7S2Y0K5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0K5_9STRA)

HSP 1 Score: 511 bits (1315), Expect = 2.910e-180
Identity = 242/339 (71.39%), Postives = 286/339 (84.37%), Query Frame = 1
Query:    1 MAMEEGNTSRKPEIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYSNKVRIIQKAENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNI-TGNSEEPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHS-KDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMPQPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV 1011
            M M E    RK EIYTY+APWT+F+ AWSQRLEPQ+ FR+A+GSF+EEYSNKV++IQ+ E+S  F+LIGE  H YPPTKIMFSPQ + V++DL+ATTGDYLRLW I + N   PV +E LLNN KNSEYCSPLTSFDWNE DPSI+GTSSIDTTCTIWD+   QA+TQLIAHDK VYDI++A   +D+FASVG DGSVR+FDLRSLEHSTIIYET  LTPLLRLAWNKQDPNYL  I+TDS  TV++D+RVPS+PVA+L GHEAPVN ++WAPHSSCH+CT GDD QALIWDLS +PQPIEDP+LAY+A AE+N +QW+AS PDWV I + + +QLLRV
Sbjct:    1 MVMAEAPPRRK-EIYTYEAPWTVFASAWSQRLEPQYAFRLAIGSFLEEYSNKVQVIQRMEDSQHFSLIGEVDHSYPPTKIMFSPQASGVSRDLMATTGDYLRLWKIDSSNPLNPVTMEALLNNTKNSEYCSPLTSFDWNEVDPSILGTSSIDTTCTIWDLAAEQARTQLIAHDKAVYDIAWARGGRDVFASVGGDGSVRMFDLRSLEHSTIIYETADLTPLLRLAWNKQDPNYLAAILTDSSMTVIVDIRVPSLPVAELGGHEAPVNTMAWAPHSSCHICTGGDDSQALIWDLSGVPQPIEDPILAYSAEAEVNNLQWAASQPDWVSICFNNKLQLLRV 338          
BLAST of mRNA_H-akashiwo_Contig116.24.1 vs. uniprot
Match: A0A6H5KWX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX9_9PHAE)

HSP 1 Score: 477 bits (1228), Expect = 5.050e-167
Identity = 224/338 (66.27%), Postives = 276/338 (81.66%), Query Frame = 1
Query:   10 EEGNTSRKPEIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYSNKVRIIQKAENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNITGNSEEPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMP----QPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV 1011
            ++G    + EIYTY+APW I++M W QR +P   +R+AVGSF EEY+NKV+I+Q+ E S  F   GE  HPYPPTKIM+SP ++  + DLLATTGDYLRLW++       V+L +LLNNN N+EYCSPLTSFDW + DPS +GTSSIDTTCTIWDV TG  KTQLIAHDKEVYDI+FA +KDIFASVGADGSVR+FDLRSLEHSTIIYET  LTPL+RL+WNKQDPNYL  I+TDS  TV+LD+RVPS+PVA L GH++PV+AI+WAPHSSCH+CT GDD Q+LIWDLS++P    + +EDP+LAYTA  ++NQ+QWSASHP+W+ IA+ + MQ+LRV
Sbjct:    3 DQGGGGGRKEIYTYEAPWHIYAMGWCQRSDPGDRYRLAVGSFTEEYNNKVQIVQRTETS--FVRTGELEHPYPPTKIMWSPDKSLNSPDLLATTGDYLRLWSVDEQEPGGVKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIRVPSLPVAMLGGHQSPVSAIAWAPHSSCHICTAGDDCQSLIWDLSSVPSSVPKAVEDPILAYTAEGQVNQLQWSASHPEWIAIAFANKMQILRV 338          
BLAST of mRNA_H-akashiwo_Contig116.24.1 vs. uniprot
Match: A0A7S2G9N6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G9N6_9STRA)

HSP 1 Score: 476 bits (1224), Expect = 1.540e-166
Identity = 219/325 (67.38%), Postives = 271/325 (83.38%), Query Frame = 1
Query:   37 EIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYSNKVRIIQKAENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNITGNSEEPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMPQPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV 1011
            EIYTYQAPW +F +AWSQR+E ++ FR+A+GS++EEY+NKV+++Q+   + Q   IGEF HPYP TKIM+SP+R + T DLLATTGDYLR+W++  N E  + L+ LLNNN+ +EYC+PLTSFDWNE DP+IIGTSSIDTTCTIWD+    AKTQLIAHDKEVYDI+F+  K++FASVGADGSVRLFDLRSLEHSTIIYE++ L PLLRLAWNKQDPNY+  ++TDSP TV+LD+RVPS+PVA+L  H A VN +SWAPHSSCH+CT  DD QALIWDL +MP+PI+DP+LAY A   INQ+QWS+S PDWV IA+   +Q+LRV
Sbjct:    9 EIYTYQAPWVVFGLAWSQRVEEKYRFRLAIGSYVEEYTNKVQLVQQNAETGQLEKIGEFDHPYPATKIMWSPER-NATTDLLATTGDYLRIWSV--NDENELSLKVLLNNNQKNEYCAPLTSFDWNEADPNIIGTSSIDTTCTIWDLEAQVAKTQLIAHDKEVYDIAFSQGKNVFASVGADGSVRLFDLRSLEHSTIIYESENLHPLLRLAWNKQDPNYIATVLTDSPRTVILDIRVPSLPVAELGAHTACVNGVSWAPHSSCHICTCSDDCQALIWDLKSMPKPIDDPILAYNAEDHINQLQWSSSQPDWVAIAFHRKLQILRV 330          
BLAST of mRNA_H-akashiwo_Contig116.24.1 vs. uniprot
Match: F0Y4A6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4A6_AURAN)

HSP 1 Score: 468 bits (1203), Expect = 1.640e-162
Identity = 229/373 (61.39%), Postives = 278/373 (74.53%), Query Frame = 1
Query:    4 AMEEGNTSRKPEIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYSNKVRIIQK------------------------------AENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNITGNSE-------EPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMPQPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV 1011
            A    ++++K EIYT+ A WTI++MAWSQR EP+  FR+A+GSF+EEY+N+V I+Q+                              A++   F  +GEF HPYP TKIM+SP RT   +DLLATTGDYLR+W++    E         V +  LLNNNKNSEYC+PLTSFDWN+T+PS++GTSSIDTTCTIWD++    KTQLIAHDKEVYDI+FA  KDIFASVGADGSVRLFDLR+LEHSTIIYET  L PLLRLAWNKQDPNYL  I+ D P TV+LDVRVPSIPVA+L  H+A VN+I+WAPHSSCHLCT  DD QALIWDL+AMP+PI+DP+LAYTA AE+NQ+QWS +H +WV IAY  +MQ+L V
Sbjct:   13 AETRSSSAQKKEIYTHDADWTIYAMAWSQRDEPERGFRLALGSFVEEYANRVSIVQRRDAYEKCVGTGVGRDRTAAALQRAHNPGKAADSEAAFVTVGEFEHPYPATKIMWSPDRTS-RRDLLATTGDYLRVWSVPDQREASDAESASSVEMVALLNNNKNSEYCAPLTSFDWNDTEPSLVGTSSIDTTCTIWDLSVPAVKTQLIAHDKEVYDIAFARGKDIFASVGADGSVRLFDLRTLEHSTIIYETSSLRPLLRLAWNKQDPNYLAAILADDPRTVILDVRVPSIPVAELGAHQACVNSIAWAPHSSCHLCTCSDDNQALIWDLTAMPKPIDDPILAYTADAEVNQLQWSTAHHEWVAIAYNTTMQMLHV 384          
BLAST of mRNA_H-akashiwo_Contig116.24.1 vs. uniprot
Match: A0A6U2BML3_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A6U2BML3_HEMAN)

HSP 1 Score: 465 bits (1196), Expect = 3.730e-162
Identity = 226/342 (66.08%), Postives = 270/342 (78.95%), Query Frame = 1
Query:    4 AMEEGNTSRKPEIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYSNKVRIIQKAENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNI---TGNSEEPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQG---LTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMPQPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV 1011
            A   G  ++K EIYTY+APW I+ M+WS R  P   FR+A+GSFIEEYSNKV+I+Q  E++ QF     F HPYP TK+M+ P +     DLLATTGDYLRLW +   TGN    V +  LLNNNKNSE+C+PLT+FDWNETDPSI+GTSSIDTTCTIW+V TGQAKTQLIAHDKEVYDI+FA   ++FASVGADGSVRLFDLRSLEHSTIIYE+Q      PLLRLAWNKQD NYL   + DSP+ V+LDVRVPS+PV +L GHE+ VNAISWAPHS CH+CT GDD QALIWDL A+P+ +EDP+LAY AGAE+NQ+QWS++ PDWV I +  +MQ+L+V
Sbjct:    3 AAPAGEPAKKKEIYTYEAPWEIYGMSWSMR--PDHRFRLAIGSFIEEYSNKVQILQLNESTGQFTDTACFDHPYPTTKVMWIPDKVGDRTDLLATTGDYLRLWEVQPGTGN----VVMRKLLNNNKNSEFCAPLTAFDWNETDPSIVGTSSIDTTCTIWNVETGQAKTQLIAHDKEVYDIAFACGTEVFASVGADGSVRLFDLRSLEHSTIIYESQPPPEALPLLRLAWNKQDTNYLATFVMDSPSVVILDVRVPSVPVGELLGHESCVNAISWAPHSHCHICTAGDDAQALIWDLQALPRAVEDPILAYKAGAEVNQLQWSSAQPDWVAIGFESTMQVLKV 338          
BLAST of mRNA_H-akashiwo_Contig116.24.1 vs. uniprot
Match: L1JDP3_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JDP3_GUITC)

HSP 1 Score: 464 bits (1193), Expect = 1.030e-161
Identity = 226/338 (66.86%), Postives = 263/338 (77.81%), Query Frame = 1
Query:   16 GNTSRKPEIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYSNKVRIIQKAENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNI---TGNSEEPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQ---GLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMPQPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV 1011
            G  S+K EI+TY+APW I+ M+WS R  P   FR+AVGSFIEEYSNKV+IIQ  EN  QF     F HPYP TKIM+ P +    KDLLATTGDYLRLW +     +S   V ++ LLNNNKNSE+C+PLTSFDWN+TDPSIIGTSSIDTTCTIW++ TGQAKTQLIAHDKEVYDI+FA   ++FASVGADGSVRLFDLRSLEHSTIIYE+       PLLRLAWNKQD NYL   M D+ + V+LD+RVPS+PVA+L GHE  VNAI+WAPHS CH+C+ GDD  ALIWDL A+P+ IEDP+LAY A  EINQ+QWSAS PDWV I +   MQ+LRV
Sbjct:    2 GEASKKKEIFTYEAPWEIYGMSWSVR--PDKRFRIAVGSFIEEYSNKVQIIQLNENKGQFQETAIFDHPYPTTKIMWIPDKVGTQKDLLATTGDYLRLWEVQSGASSSNSSVAMKKLLNNNKNSEFCAPLTSFDWNDTDPSIIGTSSIDTTCTIWNIETGQAKTQLIAHDKEVYDIAFACGTEVFASVGADGSVRLFDLRSLEHSTIIYESSTPPDAPPLLRLAWNKQDTNYLATFMMDNTSVVILDIRVPSLPVAELQGHEQSVNAIAWAPHSHCHICSAGDDAHALIWDLQALPRAIEDPILAYKAMGEINQLQWSASQPDWVAIGFGQQMQILRV 337          
BLAST of mRNA_H-akashiwo_Contig116.24.1 vs. uniprot
Match: A0A7S1FP62_9STRA (Hypothetical protein (Fragment) n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP62_9STRA)

HSP 1 Score: 462 bits (1190), Expect = 8.830e-161
Identity = 221/345 (64.06%), Postives = 273/345 (79.13%), Query Frame = 1
Query:    1 MAMEEGNTSRKPEIYTYQAPWTIFSMAWSQRLEPQ-FHFRVAVGSFIEEYSNKVRIIQKAENSD----QFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNITGNSEEPVRL----ETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMPQPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLR 1008
            M+   G+  RK EIYTYQAPWTIF+M+WSQR +     FR+A GS++E+YSN V+II++   +D    +F    EF HPYP TKI++SP ++   +D++AT+GDYLR+WN+T +  +   L    E LLNNNKNSEYC+PLTSFDWNETDP+I+GTSSIDTTCTIWD+ TG AKTQLIAHDKEV+DI+FA  KD+FASVGADGSVR+FDLRSLEHSTIIYE+  L PLLRL WNKQDPNYL   M DS  T++LD+RVPS+PVA+L GH   VNAI+WAPHSSCH+C+ GDD QALIWDLS MP+P+EDP+LAY A  EIN +QWSA+ PDWV IA+ D +Q+ +
Sbjct:    1 MSHPPGSAPRK-EIYTYQAPWTIFAMSWSQRRQDSNTQFRLAAGSYVEQYSNSVQIIKRTYGTDSHEGRFYKACEFEHPYPCTKILWSPDQSTGGRDIVATSGDYLRVWNLTDDGHQRGTLIPKKEALLNNNKNSEYCAPLTSFDWNETDPTIVGTSSIDTTCTIWDIQTGAAKTQLIAHDKEVFDIAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPQLDPLLRLCWNKQDPNYLSTFMVDSYKTIILDIRVPSLPVAELGGHSGCVNAIAWAPHSSCHICSTGDDAQALIWDLSPMPKPVEDPILAYNADQEINSLQWSAAQPDWVSIAFADKLQICK 344          
BLAST of mRNA_H-akashiwo_Contig116.24.1 vs. uniprot
Match: A0A7R9U5K9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5K9_9STRA)

HSP 1 Score: 459 bits (1182), Expect = 3.770e-160
Identity = 215/325 (66.15%), Postives = 264/325 (81.23%), Query Frame = 1
Query:   37 EIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYSNKVRIIQKAENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNITGNSEEPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMPQPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV 1011
            EIYT++APWTI++M WSQ+++    FR+A+GSFIEEYSNKV +IQ+  N D F+ IG+F HPYP TK+ + P      KDLLATTGDYLRLWN++ +S   V +E LLNN K SEYC+PLTSFDWNE DP++IGTSSIDTTCTIWD+   QA TQLIAHDKEVYDI+F+ S+D+FASVGADGSVR FD+RSLEHSTI++E++ LTPLLR+AWNKQDPNY+   M DS  T++LD+RVPS+PVA+L  H   VNAI+WAPHSSCH+CT  DD QALIWDLS MP+P+EDP+LAY A  +INQ+QWS   PDW+ IAY + +QLLRV
Sbjct:    8 EIYTFEAPWTIYAMGWSQKVDSAASFRLALGSFIEEYSNKVLLIQQDTNGD-FHDIGQFDHPYPATKVQWCPDGQSSDKDLLATTGDYLRLWNVSESSPNGVSMEALLNN-KISEYCAPLTSFDWNEADPNLIGTSSIDTTCTIWDIVKQQAVTQLIAHDKEVYDIAFSRSRDLFASVGADGSVRYFDMRSLEHSTILFESRDLTPLLRVAWNKQDPNYIATFMADSNKTIILDIRVPSLPVAELGAHHECVNAIAWAPHSSCHICTAADDVQALIWDLSVMPKPVEDPILAYQADGQINQLQWSQVQPDWIAIAYNNKLQLLRV 330          
BLAST of mRNA_H-akashiwo_Contig116.24.1 vs. uniprot
Match: F4QEK5_CAVFA (WD40 repeat-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QEK5_CAVFA)

HSP 1 Score: 459 bits (1181), Expect = 7.380e-160
Identity = 214/341 (62.76%), Postives = 266/341 (78.01%), Query Frame = 1
Query:    1 MAMEEGNTSRKPEIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYSNKVRIIQKAENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNITGNSEEP----VRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMPQPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV 1011
            M  + G    K  IYTY++PWTI+ ++W  RL   F  R+AVGSF+E YSNKV IIQ  E SDQF ++  F HPYPPTK M+ P +     DLLATTGDYLRLW    +++E     +R++TLL+ NKNSE+C+PL+SFDWNETDPS++ TSSIDTTCTIW++ TGQ KTQLIAHDKEV+D++FA   D+FASVGADGS+R+FD R+LEHSTIIYET   TPLLRL WNKQDPNYL  I  DSPT ++LD+RVPS+P A+L  H  PVN I+WAPHSSCH+CTV DD+QALIWDLS++P+PIEDPLL Y A AEINQ+ WS+S PDW+ IA+ + +Q+L+V
Sbjct:    1 MKRQGGGGGDKKRIYTYKSPWTIYGLSWCTRLNQPF--RLAVGSFLENYSNKVEIIQLNEESDQFEVLCGFEHPYPPTKCMWIPDKNASRPDLLATTGDYLRLWEFQSSTKESSKPSIRMKTLLSANKNSEFCAPLSSFDWNETDPSLLATSSIDTTCTIWNIETGQPKTQLIAHDKEVFDVAFARGVDLFASVGADGSLRMFDQRNLEHSTIIYETPKFTPLLRLCWNKQDPNYLATIQQDSPTIIILDIRVPSVPAAELTFHRGPVNGIAWAPHSSCHICTVADDRQALIWDLSSLPKPIEDPLLTYGAEAEINQLNWSSSQPDWISIAFGEGLQILKV 339          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig116.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1NZ18_HETAK8.320e-253100.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y0K5_9STRA2.910e-18071.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6H5KWX9_9PHAE5.050e-16766.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2G9N6_9STRA1.540e-16667.38Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0Y4A6_AURAN1.640e-16261.39Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A6U2BML3_HEMAN3.730e-16266.08Hypothetical protein n=2 Tax=Hemiselmis TaxID=7792... [more]
L1JDP3_GUITC1.030e-16166.86Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S1FP62_9STRA8.830e-16164.06Hypothetical protein (Fragment) n=2 Tax=Corethron ... [more]
A0A7R9U5K9_9STRA3.770e-16066.15Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
F4QEK5_CAVFA7.380e-16062.76WD40 repeat-containing protein n=1 Tax=Cavenderia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig116contigH-akashiwo_Contig116:1402319..1403332 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009034919.1
Preferred nameDCAF7
PFAMsWD40
Model size1014
Max annot lvl2759|Eukaryota
KEGG koko:K11805
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0001558,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006275,GO:0006464,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0007346,GO:0007399,GO:0007517,GO:0008150,GO:0008152,GO:0008361,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009966,GO:0009968,GO:0009987,GO:0010556,GO:0010564,GO:0010646,GO:0010648,GO:0010769,GO:0010975,GO:0016043,GO:0016363,GO:0016604,GO:0017016,GO:0017048,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019904,GO:0022008,GO:0022603,GO:0022604,GO:0023051,GO:0023057,GO:0030100,GO:0030154,GO:0030274,GO:0030334,GO:0030336,GO:0030516,GO:0031267,GO:0031323,GO:0031326,GO:0031344,GO:0031461,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032535,GO:0032879,GO:0032991,GO:0033262,GO:0034399,GO:0035330,GO:0035331,GO:0036211,GO:0040008,GO:0040012,GO:0040013,GO:0042692,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045445,GO:0045595,GO:0045664,GO:0045806,GO:0045927,GO:0048365,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048627,GO:0048638,GO:0048699,GO:0048731,GO:0048747,GO:0048856,GO:0048869,GO:0050764,GO:0050765,GO:0050767,GO:0050770,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051051,GO:0051052,GO:0051128,GO:0051129,GO:0051146,GO:0051171,GO:0051239,GO:0051270,GO:0051271,GO:0051336,GO:0051726,GO:0051960,GO:0055001,GO:0055002,GO:0060099,GO:0060101,GO:0060255,GO:0060284,GO:0060627,GO:0061061,GO:0061387,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0080008,GO:0080090,GO:0090066,GO:0090329,GO:0120035,GO:1901564,GO:1902494,GO:1902531,GO:1902532,GO:1903463,GO:1905153,GO:1905154,GO:1990234,GO:2000026,GO:2000112,GO:2000145,GO:2000146
Exons1
Evalue2.69e-163
EggNOG OGsKOG0290@1|root,KOG0290@2759|Eukaryota
Descriptionepidermal cell fate specification
Cds size1014
COG categoryM
BRITEko00000,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387102.5545387-CDS-H-akashiwo_Contig116:1402318..14033321681387102.5545387-CDS-H-akashiwo_Contig116:1402318..1403332Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig116 1402319..1403332 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig116.24.1prot_H-akashiwo_Contig116.24.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig116 1402319..1403332 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig116.24.1

>prot_H-akashiwo_Contig116.24.1 ID=prot_H-akashiwo_Contig116.24.1|Name=mRNA_H-akashiwo_Contig116.24.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=338bp
MAMEEGNTSRKPEIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYS
NKVRIIQKAENSDQFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDY
LRLWNITGNSEEPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSI
DTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFD
LRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVP
SIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMPQPIED
PLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV*
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mRNA from alignment at H-akashiwo_Contig116:1402319..1403332-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig116.24.1 ID=mRNA_H-akashiwo_Contig116.24.1|Name=mRNA_H-akashiwo_Contig116.24.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1014bp|location=Sequence derived from alignment at H-akashiwo_Contig116:1402319..1403332- (Heterosigma akashiwo CCMP452)
ATGGCCATGGAGGAAGGGAACACCTCAAGAAAGCCAGAAATCTACACCTA TCAAGCTCCATGGACCATATTTTCTATGGCCTGGAGCCAAAGGTTGGAAC CTCAATTTCATTTCCGGGTTGCGGTTGGCTCTTTCATTGAAGAATACAGC AACAAAGTCCGGATCATTCAAAAGGCGGAAAACAGTGATCAATTCAATCT TATCGGGGAATTCAGCCATCCTTACCCCCCGACCAAAATCATGTTCAGCC CCCAGCGAACGGATGTCACCAAAGATCTACTCGCAACCACTGGAGATTAC TTGAGGCTTTGGAATATCACCGGAAACTCGGAAGAGCCAGTAAGGTTGGA GACGCTACTAAACAACAACAAAAACAGCGAGTACTGCTCCCCGCTGACAT CTTTTGACTGGAATGAAACTGATCCTTCGATAATTGGTACCTCCTCGATC GATACTACTTGCACAATCTGGGATGTAAACACCGGCCAAGCAAAGACCCA ACTGATAGCCCATGACAAAGAAGTCTATGACATTTCTTTTGCTCATAGCA AAGATATTTTTGCATCTGTCGGAGCTGATGGTAGTGTGCGCCTGTTTGAC TTGAGGAGCCTCGAGCATTCAACCATCATCTATGAAACACAAGGACTCAC ACCTCTCCTCAGGCTTGCCTGGAACAAGCAAGACCCAAACTACTTGGGAT GTATTATGACCGACTCCCCAACAACAGTACTTTTGGACGTCCGTGTTCCC TCTATTCCTGTTGCCCAGCTGTGGGGGCATGAGGCACCTGTGAATGCCAT ATCTTGGGCACCTCATTCTTCGTGCCATTTATGCACAGTCGGTGATGACC AACAAGCGCTTATCTGGGATCTTTCTGCTATGCCTCAGCCCATTGAAGAC CCACTACTAGCCTACACAGCTGGTGCTGAAATCAATCAGATCCAGTGGTC AGCATCACACCCTGACTGGGTAGGAATAGCATACACAGATTCCATGCAGC TGTTGAGGGTCTAA
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Coding sequence (CDS) from alignment at H-akashiwo_Contig116:1402319..1403332-

>mRNA_H-akashiwo_Contig116.24.1 ID=mRNA_H-akashiwo_Contig116.24.1|Name=mRNA_H-akashiwo_Contig116.24.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1014bp|location=Sequence derived from alignment at H-akashiwo_Contig116:1402319..1403332- (Heterosigma akashiwo CCMP452)
ATGGCCATGGAGGAAGGGAACACCTCAAGAAAGCCAGAAATCTACACCTA
TCAAGCTCCATGGACCATATTTTCTATGGCCTGGAGCCAAAGGTTGGAAC
CTCAATTTCATTTCCGGGTTGCGGTTGGCTCTTTCATTGAAGAATACAGC
AACAAAGTCCGGATCATTCAAAAGGCGGAAAACAGTGATCAATTCAATCT
TATCGGGGAATTCAGCCATCCTTACCCCCCGACCAAAATCATGTTCAGCC
CCCAGCGAACGGATGTCACCAAAGATCTACTCGCAACCACTGGAGATTAC
TTGAGGCTTTGGAATATCACCGGAAACTCGGAAGAGCCAGTAAGGTTGGA
GACGCTACTAAACAACAACAAAAACAGCGAGTACTGCTCCCCGCTGACAT
CTTTTGACTGGAATGAAACTGATCCTTCGATAATTGGTACCTCCTCGATC
GATACTACTTGCACAATCTGGGATGTAAACACCGGCCAAGCAAAGACCCA
ACTGATAGCCCATGACAAAGAAGTCTATGACATTTCTTTTGCTCATAGCA
AAGATATTTTTGCATCTGTCGGAGCTGATGGTAGTGTGCGCCTGTTTGAC
TTGAGGAGCCTCGAGCATTCAACCATCATCTATGAAACACAAGGACTCAC
ACCTCTCCTCAGGCTTGCCTGGAACAAGCAAGACCCAAACTACTTGGGAT
GTATTATGACCGACTCCCCAACAACAGTACTTTTGGACGTCCGTGTTCCC
TCTATTCCTGTTGCCCAGCTGTGGGGGCATGAGGCACCTGTGAATGCCAT
ATCTTGGGCACCTCATTCTTCGTGCCATTTATGCACAGTCGGTGATGACC
AACAAGCGCTTATCTGGGATCTTTCTGCTATGCCTCAGCCCATTGAAGAC
CCACTACTAGCCTACACAGCTGGTGCTGAAATCAATCAGATCCAGTGGTC
AGCATCACACCCTGACTGGGTAGGAATAGCATACACAGATTCCATGCAGC
TGTTGAGGGTCTAA
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