mRNA_H-akashiwo_Contig116.23.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig116.23.1 vs. uniprot
Match: A0A7S3XX01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX01_HETAK) HSP 1 Score: 263 bits (673), Expect = 1.260e-82 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 2
Query: 47 ATFTASAFLPTYFMRAFPHAMTSFSVLNTGAVAVGGALSSVLGGRLADKLSKRRVGHLALVPALGTLLALAPITALFAAAEFPRAMAALAGTYLLAEGWMGPGMAVLQREVPRHMHGVAVSLLLFANTLIGSLGPHLLALA 469
ATFTASAFLPTYFMRAFPHAMTSFSVLNTGAVAVGGALSSVLGGRLADKLSKRRVGHLALVPALGTLLALAPITALFAAAEFPRAMAALAGTYLLAEGWMGPGMAVLQREVPRHMHGVAVSLLLFANTLIGSLGPHLLALA
Sbjct: 290 ATFTASAFLPTYFMRAFPHAMTSFSVLNTGAVAVGGALSSVLGGRLADKLSKRRVGHLALVPALGTLLALAPITALFAAAEFPRAMAALAGTYLLAEGWMGPGMAVLQREVPRHMHGVAVSLLLFANTLIGSLGPHLLALA 430
BLAST of mRNA_H-akashiwo_Contig116.23.1 vs. uniprot
Match: A0A835Z7U8_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U8_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.170e-30 Identity = 70/138 (50.72%), Postives = 91/138 (65.94%), Query Frame = 2
Query: 50 TFTASAFLPTYFMRAFPHAMTSFSVLNTGAVAVGGALSSVLGGRLADKLSKRRVGHLALVPALGTLLALAPITALFAAAEFPRAMAALAGTYLLAEGWMGPGMAVLQREVPRHMHGVAVSLLLFANTLIGSLGPHLLA 463
T+ +A+LPTYF RA+P + +SV+N VA GG LSS +GG LAD+ KR G A VPALG L L P F +MAAL LLAE W+GPGMA+LQREVPR M GV+V++LLF NT+ ++GP +++
Sbjct: 308 TWVGAAYLPTYFHRAYPAYESQYSVINGVIVAAGGVLSSSVGGALADRWGKRSPGGYAWVPALGAALGLMPAGVALFCGNFYVSMAALGAQNLLAECWLGPGMAILQREVPRDMVGVSVAVLLFCNTVTANVGPWIIS 445
BLAST of mRNA_H-akashiwo_Contig116.23.1 vs. uniprot
Match: A0A7S2V1I5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1I5_9STRA) HSP 1 Score: 106 bits (264), Expect = 8.890e-25 Identity = 61/140 (43.57%), Postives = 88/140 (62.86%), Query Frame = 2
Query: 47 ATFTASAFLPTYFMRAFPHAMTSFSVLNTGAVAVGGALSSVLGGRLADKLSKRRVGHLALVPALGTLLALAPITAL-FAAAEFPRAMAALAGTYLLAEGWMGPGMAVLQREVPRHMHGVAVSLLLFANTLIGSLGPHLLA 463
AT++ +AF+P ++ R FPH + FS LN + G LSS GG LADK + G+LA VPA+G ++ AP+ L + F ++ + L +E W+GPGM +LQR++P GVAVS L+FANT+ S+GPHL+A
Sbjct: 173 ATYSHAAFVPIFYRREFPHEIYWFSELNAWGTCITGLLSSYYGGVLADKYAALDPGYLAWVPAIGAAIS-APLNFLALYSTSFNASLGFMLLATLFSECWLGPGMTILQRQLPSGCQGVAVSFLIFANTVFASVGPHLIA 311
BLAST of mRNA_H-akashiwo_Contig116.23.1 vs. uniprot
Match: F0YAA8_AURAN (MFS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAA8_AURAN) HSP 1 Score: 105 bits (261), Expect = 2.770e-23 Identity = 59/141 (41.84%), Postives = 86/141 (60.99%), Query Frame = 2
Query: 47 ATFTASAFLPTYFMRAFPHAMTSFSVLNTGAVAVGGALSSVLGGRLADKLSKRRVGHLALVPALGTLLALAPITALFAAAEFPRAMAALAGTYLLAEGWMGPGMAVLQREVPRHMHGVAVSLLLFANTLIGSLGPHLLALA 469
AT + +LP+Y+ RAFP +FS++ A V GALSS +GG +AD+ +K G +PA+G LL++ P A+F F ++ L LL+E W+GP M +L ++VP HM G V+LLL N L+ SLGP ++LA
Sbjct: 287 ATVSLWTYLPSYYARAFPRNEVAFSLIYASATLVCGALSSSVGGAIADRWAKTHSGAHGFLPAVGALLSIGPTAAMFYVPSFSASVCCLLVVILLSECWLGPCMGLLIKDVPPHMTGTQVALLLVCNQLLASLGPWAISLA 427
BLAST of mRNA_H-akashiwo_Contig116.23.1 vs. uniprot
Match: A0A2R5G269_9STRA (Hexuronate transporter n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G269_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.470e-17 Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 2
Query: 53 FTASAFLPTYFMRAFPHAMTSFSVLNTGAVAVGGALSSVLGGRLADKLSKRRVGHLALVPALGTLLALAPITALFAAAEFPRAMAALAGTYLLAEGWMGPGMAVLQREVPRHMHGVAVSLLLFANTLIGSLGPHLL 460
F AFLP YF R FP + +S LN ++V GA S+ LGG L+D+ + A VPA+ P + A F AM +L YL+AEGW GP +++LQ +P + G ++S+ +F L+GSL P L
Sbjct: 338 FAVGAFLPQYFNRRFPSYSSQYSTLNAILLSVAGASSAYLGGFLSDRWRRTDPRGAAWVPAIAGACGFIPFLGVLFADNFYLAMFSLMLEYLIAEGWFGPAISILQSRLPGTVRGTSISIYMFVAGLVGSLAPSAL 473
BLAST of mRNA_H-akashiwo_Contig116.23.1 vs. uniprot
Match: A0A7S2Y1D3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1D3_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.510e-16 Identity = 54/129 (41.86%), Postives = 73/129 (56.59%), Query Frame = 2
Query: 62 SAFLPTYFMRAFPHAMTSFSVLNTGAVAVGGALSSVLGGRLADKLSKRRVGHLAL-VPALGTLLALAPITALFAAAEFPRAMAALAGTYLLAEGWMGPGMAVLQREVPRHMHGVAVSLLLFANTLIGSL 445
SA+LP YF AFP ++S +N VA GGALSS +GG +AD+ H + VPALG+LLA + AA+ F AM L +L AE W GP M+V+Q +P + VS+ +T +GSL
Sbjct: 253 SAYLPVYFDAAFPEQSKAYSYINASVVAFGGALSSYMGGWIADRWEMSGGRHARVWVPALGSLLACPFVVLTMAASNFHVAMMGLYFEFLFAECWFGPTMSVIQSTLPPRLFATGVSVFACLSTFMGSL 381
BLAST of mRNA_H-akashiwo_Contig116.23.1 vs. uniprot
Match: A0A835Z7W4_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W4_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 5.200e-8 Identity = 28/48 (58.33%), Postives = 39/48 (81.25%), Query Frame = 2
Query: 326 LLAEGWMGPGMAVLQREVPRHMHGVAVSLLLFANTLIGSLGPHLLALA 469
L+AE W+GPGMA+LQREVPR M G +V++LLF N+L ++GP ++A A
Sbjct: 437 LIAECWLGPGMAILQREVPRDMVGFSVAVLLFCNSLASNVGPWIIAAA 484
BLAST of mRNA_H-akashiwo_Contig116.23.1 vs. uniprot
Match: A0A0Q8M095_9CAUL (MFS transporter n=6 Tax=Phenylobacterium TaxID=20 RepID=A0A0Q8M095_9CAUL) HSP 1 Score: 58.9 bits (141), Expect = 3.040e-7 Identity = 61/161 (37.89%), Postives = 76/161 (47.20%), Query Frame = 2
Query: 2 LALGAAHPRHLLPDGATFTASAFLPTY------FMRAFPHAMTSFSVLNTGAVA-VGGALSSVLGGRLADKLSKRRVGHLALVPALGTLLALAPITALFAAAEFPRAMAAL---AGTYLLAEGWMGPGMAVLQREVPRHMHGVAVSLLLFANTLIG-SLGP 451
+ALGAA + A FTAS FL + F F L G + GA+SS LGG++ADK +K + +VPA +LLA+ PI L A P A AL LL W GP A+ Q VP HM ++LLF LIG LGP
Sbjct: 245 IALGAAIKAFIGYGHAPFTASFFLRVHGDEIKGLAEGFGLQSIGFLGLALGLMGGTAGAISSYLGGQIADKYAKTDLRGYVVVPAFASLLAV-PIYIL--AVSVPSASVALWILVINGLLGSLWYGPVYAIGQSIVPPHMRATTAAILLFTINLIGLGLGP 402
BLAST of mRNA_H-akashiwo_Contig116.23.1 vs. uniprot
Match: A0A521PV44_9CAUL (MFS transporter n=1 Tax=Phenylobacterium sp. TaxID=1871053 RepID=A0A521PV44_9CAUL) HSP 1 Score: 56.6 bits (135), Expect = 1.920e-6 Identity = 60/160 (37.50%), Postives = 80/160 (50.00%), Query Frame = 2
Query: 2 LALGAAHPRHLLPDGATFTASAFLPTYFMRAFPHAMTSFSVLNTG--AVAVG------GALSSVLGGRLADKLSKRRVGHLALVPALGTLLALAPITALFAAAEFPRA-MAALAGTYLLAEGWMGPGMAVLQREVPRHMHGVAVSLLLFANTLIG-SLGP 451
LA AA + A F AS FL + + A SF++ + G +A+G GA+SSVLGG +ADK S V + L PAL L+++ P+ L + RA +A L YLL W GP Q VP +M A ++LLF LIG LGP
Sbjct: 239 LAFAAALKSFISYGQAPFVASFFLRNHAEQVAALA-ASFNLQSVGFLGLALGIISGICGAISSVLGGWIADKTSAGDVRNSLLAPALAVLVSV-PVFILALQMDDARAGLAILIVPYLLNYFWYGPVYGTTQGIVPPNMRATAAAILLFVINLIGLGLGP 396 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig116.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig116.23.1 >prot_H-akashiwo_Contig116.23.1 ID=prot_H-akashiwo_Contig116.23.1|Name=mRNA_H-akashiwo_Contig116.23.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=157bp AGPRCCSSSPPPAGWCDLHRLGLPPHLLHAGVPARHDLLQRAEHGGRGRGback to top mRNA from alignment at H-akashiwo_Contig116:1279666..1285446+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig116.23.1 ID=mRNA_H-akashiwo_Contig116.23.1|Name=mRNA_H-akashiwo_Contig116.23.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=5781bp|location=Sequence derived from alignment at H-akashiwo_Contig116:1279666..1285446+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig116:1279666..1285446+ >mRNA_H-akashiwo_Contig116.23.1 ID=mRNA_H-akashiwo_Contig116.23.1|Name=mRNA_H-akashiwo_Contig116.23.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=471bp|location=Sequence derived from alignment at H-akashiwo_Contig116:1279666..1285446+ (Heterosigma akashiwo CCMP452)back to top |