mRNA_H-akashiwo_Contig116.20.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig116.20.1 vs. uniprot
Match: A0A6U1NEZ7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NEZ7_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.110e-35 Identity = 60/89 (67.42%), Postives = 70/89 (78.65%), Query Frame = 1
Query: 1 MSFFGKKEEPVAGPDALDMAKTEMEMYTNLFNKMASTCFHKCV-TKVKEPDLNIGEMSCTDRCVGKYLEAHQKVGEVLKRVESEMMAQQ 264
MS FG +GP ALD+AK EMEMYT+LFN MA+ CF KC +K+KE +LN+GEMSC DRC GKY+EAHQKVGEVLKRVE +M AQQ
Sbjct: 1 MSLFGGGAPAASGPSALDVAKAEMEMYTDLFNNMATICFKKCAASKIKEAELNVGEMSCVDRCTGKYIEAHQKVGEVLKRVEEQMKAQQ 89
BLAST of mRNA_H-akashiwo_Contig116.20.1 vs. uniprot
Match: A0A7S1BN48_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BN48_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.100e-28 Identity = 51/89 (57.30%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 MSFFGKKEEPVAGPDALDMAKTEMEMYTNLFNKMASTCFHKCVTKV-KEPDLNIGEMSCTDRCVGKYLEAHQKVGEVLKRVESEMMAQQ 264
M+FF KEE AGPD ++ AK E+EMYT+LFNKM+++CF KC +K KEPDL +GEMSC DRCVGKY+EA +++G V ++ E A Q
Sbjct: 1 MNFFSGKEEKPAGPDPVEAAKAEIEMYTDLFNKMSASCFSKCSSKKHKEPDLALGEMSCVDRCVGKYMEAQERIGVVFQKFNEEQAAAQ 89
BLAST of mRNA_H-akashiwo_Contig116.20.1 vs. uniprot
Match: A0A7S0Y8N1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y8N1_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.170e-28 Identity = 54/88 (61.36%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 1 MSFFGKKEEPVAGPDALDMAKTEMEMYTNLFNKMASTCFHKCVT-KVKEPDLNIGEMSCTDRCVGKYLEAHQKVGEVLKRVESEMMAQ 261
M+FFG +E GPD + AKTEMEMYT+LFNK+ASTCF KCV K KEPDL++GEM+CTDRCV KYLE Q VG VL++ + Q
Sbjct: 1 MNFFGGEEAQPQGPDPVFAAKTEMEMYTDLFNKIASTCFSKCVNRKHKEPDLSLGEMTCTDRCVSKYLEGQQIVGVVLQKANEAQVQQ 88
BLAST of mRNA_H-akashiwo_Contig116.20.1 vs. uniprot
Match: A0A6H5KCB3_9PHAE (zf-Tim10_DDP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCB3_9PHAE) HSP 1 Score: 107 bits (268), Expect = 1.390e-28 Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 1
Query: 1 MSFFGKKE-EPVAGPDALDMAKTEMEMYTNLFNKMASTCFHKCVTKVK-EPDLNIGEMSCTDRCVGKYLEAHQKVGEVLKRVESEMMAQQ 264
MS+FG E EP +GP +D+AK E++MY++LF KM+ CF KCV K+ E DLN+GEMSC DRCV KY+EA +KVG +LKR E + AQQ
Sbjct: 1 MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLAAQQ 90
BLAST of mRNA_H-akashiwo_Contig116.20.1 vs. uniprot
Match: A0A6T5YYM4_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6T5YYM4_9STRA) HSP 1 Score: 105 bits (263), Expect = 6.940e-28 Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 MSFFGKKEEPVAGPDALDMAKTEMEMYTNLFNKMASTCFHKCV-TKVKEPDLNIGEMSCTDRCVGKYLEAHQKVGEVLKRVESEMMAQQ 264
MSFFG + GPD + A+TEMEMYT+LFNK+A +CF KC T+ +EPD+++GEMSCTDRCV KYLE+ ++VG++L++ AQQ
Sbjct: 1 MSFFGGGQAQPQGPDPMFAAQTEMEMYTDLFNKIARSCFQKCASTRHREPDISLGEMSCTDRCVAKYLESQERVGKILQKANESQAAQQ 89
BLAST of mRNA_H-akashiwo_Contig116.20.1 vs. uniprot
Match: A0A448YV82_9STRA (zf-Tim10_DDP domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV82_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.440e-27 Identity = 53/89 (59.55%), Postives = 66/89 (74.16%), Query Frame = 1
Query: 1 MSFFGKKEEPV-AGPDALDMAKTEMEMYTNLFNKMASTCFHKCVT-KVKEPDLNIGEMSCTDRCVGKYLEAHQKVGEVLKRVESEMMAQ 261
M+FFG EE AGPD + AKTEMEMYT+LFNK+ASTCF KC + K KEPDL++GEM+C DRCV KYLE +++G VL++ E Q
Sbjct: 1 MNFFGGGEEAKPAGPDPVFAAKTEMEMYTDLFNKIASTCFSKCASRKHKEPDLSLGEMTCADRCVSKYLEGQERIGVVLQKANEEQAQQ 89
BLAST of mRNA_H-akashiwo_Contig116.20.1 vs. uniprot
Match: A0A835Z1H3_9STRA (Tim10/DDP family zinc finger-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H3_9STRA) HSP 1 Score: 103 bits (257), Expect = 4.390e-27 Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = 1
Query: 1 MSFFGKKEEPVAGPDALDMAKTEMEMYTNLFNKMASTCFHKCVTKVKEPDLNIGEMSCTDRCVGKYLEAHQKVGEVLKRVESEMM 255
MS+F K+ E GPD ++MAKTE+EM T+L+NKM +CF KC+ +KE DL++GEMSC DRCV KYL A + VG K +E+ MM
Sbjct: 1 MSWFSKEPEQQQGPDKVEMAKTEVEMMTDLYNKMVDSCFSKCIANMKEGDLSVGEMSCVDRCVHKYLSAQEVVGSKTKEMEASMM 85
BLAST of mRNA_H-akashiwo_Contig116.20.1 vs. uniprot
Match: A0A7S2HYG5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYG5_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.460e-26 Identity = 50/88 (56.82%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 4 SFFGKKEEPVAGPDALDMAKTEMEMYTNLFNKMASTCFHKCVTKV-KEPDLNIGEMSCTDRCVGKYLEAHQKVGEVLKRVESEMMAQQ 264
+ FG +E+ AGP+ L A TEMEMYT+LFNKMAS+CF KC +K K+ DL +GEMSCTDRCV KYLEA +K+G ++++ AQQ
Sbjct: 48 ALFGTEEKQPAGPEPLFAATTEMEMYTDLFNKMASSCFQKCASKKHKDSDLALGEMSCTDRCVAKYLEAQEKIGVIIQKANEAQAAQQ 135
BLAST of mRNA_H-akashiwo_Contig116.20.1 vs. uniprot
Match: A0A1E7FWV3_9STRA (Mitochondrial import inner membrane translocase subunit tim10 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWV3_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.310e-26 Identity = 50/87 (57.47%), Postives = 63/87 (72.41%), Query Frame = 1
Query: 7 FFGKKEEPVAGPDALDMAKTEMEMYTNLFNKMASTCFHKCVT-KVKEPDLNIGEMSCTDRCVGKYLEAHQKVGEVLKRVESEMMAQQ 264
F G +E+ GPD + AKTEMEMYT+LFNK+AS CF KC + K KEPDL++GEM+CTDRCV KYLE Q +G VL++ + QQ
Sbjct: 5 FGGGEEQKPQGPDPVFAAKTEMEMYTDLFNKIASECFQKCASRKHKEPDLSLGEMTCTDRCVSKYLEGQQLIGVVLQKANEQQAQQQ 91
BLAST of mRNA_H-akashiwo_Contig116.20.1 vs. uniprot
Match: A0A7S3L967_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L967_9STRA) HSP 1 Score: 100 bits (250), Expect = 6.410e-26 Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 MSFFGKKEEPVAGPDALDMAKTEMEMYTNLFNKMASTCFHKCVT-KVKEPDLNIGEMSCTDRCVGKYLEAHQKVGEVLKRVESEMMAQQ 264
M+FFG ++ GPD + A+TEMEMYT+LFNK++++CF KC + K KE ++++GEMSCTDRCV KYLE+ Q+VG VL++ + QQ
Sbjct: 1 MNFFGGGQQAQQGPDPVFAARTEMEMYTDLFNKISASCFQKCASRKHKEGEISLGEMSCTDRCVAKYLESQQRVGAVLQKANEAQLQQQ 89 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig116.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig116.20.1 >prot_H-akashiwo_Contig116.20.1 ID=prot_H-akashiwo_Contig116.20.1|Name=mRNA_H-akashiwo_Contig116.20.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=88bp MSFFGKKEEPVAGPDALDMAKTEMEMYTNLFNKMASTCFHKCVTKVKEPDback to top mRNA from alignment at H-akashiwo_Contig116:1126906..1127422+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig116.20.1 ID=mRNA_H-akashiwo_Contig116.20.1|Name=mRNA_H-akashiwo_Contig116.20.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=517bp|location=Sequence derived from alignment at H-akashiwo_Contig116:1126906..1127422+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig116:1126906..1127422+ >mRNA_H-akashiwo_Contig116.20.1 ID=mRNA_H-akashiwo_Contig116.20.1|Name=mRNA_H-akashiwo_Contig116.20.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=264bp|location=Sequence derived from alignment at H-akashiwo_Contig116:1126906..1127422+ (Heterosigma akashiwo CCMP452)back to top |