mRNA_H-akashiwo_Contig116.15.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig116.15.1 vs. uniprot
Match: A0A7S4DEE9_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEE9_HETAK) HSP 1 Score: 385 bits (989), Expect = 7.420e-129 Identity = 200/203 (98.52%), Postives = 202/203 (99.51%), Query Frame = 1
Query: 1 LIRSRLDMWEKGEYDELVAAAKRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLTALLVRRGIMLDKKPGLRPIGIG 609
LIRSRLDMWE+GEYDELVAA KRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDL+ALLVRRGIMLDKKPGLRPIGIG
Sbjct: 177 LIRSRLDMWERGEYDELVAAVKRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIG 379
BLAST of mRNA_H-akashiwo_Contig116.15.1 vs. uniprot
Match: A0A7S3Y8R3_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8R3_HETAK) HSP 1 Score: 385 bits (989), Expect = 5.830e-127 Identity = 200/203 (98.52%), Postives = 202/203 (99.51%), Query Frame = 1
Query: 1 LIRSRLDMWEKGEYDELVAAAKRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLTALLVRRGIMLDKKPGLRPIGIG 609
LIRSRLDMWE+GEYDELVAA KRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDL+ALLVRRGIMLDKKPGLRPIGIG
Sbjct: 177 LIRSRLDMWERGEYDELVAAVKRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIG 379
BLAST of mRNA_H-akashiwo_Contig116.15.1 vs. uniprot
Match: A0A7S3Y8Y3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8Y3_HETAK) HSP 1 Score: 300 bits (768), Expect = 3.080e-99 Identity = 155/158 (98.10%), Postives = 156/158 (98.73%), Query Frame = 1
Query: 1 LIRSRLDMWEKGEYDELVAAAKRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGR 474
LIRSRLDMWE+GEYDELVAA KRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSV WKSLLLGYGNASGR
Sbjct: 177 LIRSRLDMWERGEYDELVAAVKRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVAWKSLLLGYGNASGR 334
BLAST of mRNA_H-akashiwo_Contig116.15.1 vs. uniprot
Match: A0A6H5HA52_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5HA52_9HEMI) HSP 1 Score: 161 bits (407), Expect = 5.490e-46 Identity = 87/200 (43.50%), Postives = 125/200 (62.50%), Query Frame = 1
Query: 4 IRSRLDMWEKGEYDELVAAAKRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLTALLVRRGIMLDKKPGLRPIG 603
+ R+D+W + +Y+ELV A+RCD + K P +E +R F RL+ + K RE R +TDR+ + L PN + G G+T +E+ + KHP+ P E FL+ LP +V IT I +VAH +KGSAG SGTD+ W+ +LL +G +S LREAVA L ++N ++EW + ALL RRG+ +DKKPG+RPIG
Sbjct: 55 VTRRMDLWTEEKYEELVTEAERCDRQMKIHPDNDTEEHKVRIFTRLINKGKLREGTRWITDRANNGAPLQPNTQLEG-----GQTVLEILKNKHPQQEIPGHEMFLNDDLPTLVDVDITEGHILKVAHKLKGSAGPSGTDAEAWRDMLLRFGASSRALREAVADLTRSLANSIVEWDKIKALLARRGVAIDKKPGIRPIG 249
BLAST of mRNA_H-akashiwo_Contig116.15.1 vs. uniprot
Match: A0A6H5GR62_9HEMI (Uncharacterized protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GR62_9HEMI) HSP 1 Score: 166 bits (419), Expect = 6.460e-44 Identity = 102/197 (51.78%), Postives = 133/197 (67.51%), Query Frame = 1
Query: 22 MWEKGEYDELVAAAKRCDSKFKRR-PPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLTALLVRRGIMLDKKPGLRPIGIG 609
MWE G +DELV A RCD K R SRK R+LR F RL++ + R+A R T+RS G+L P EA+ +G KT ++V ++KHP P E+FL LP++ +V I+A IER AH + GSAG SGTD+ WK+LLL YGN S RLREAVASLA ++N V++WS + ALL RRG+ LDK+PG+RPIG+G
Sbjct: 1 MWEAGHFDELVQEALRCDRKLTTRYREQSRKHRILR-FSRLVSSGRLRDATRWATNRS-GGGILQP--EAIIEGH---KTVLDVLKDKHPPQMIPSPESFLSDDLPLQVDVNISANHIERSAHRLGGSAGPSGTDAEQWKNLLLRYGNHSVRLREAVASLARLLANGVVDWSRIKALLARRGVALDKQPGVRPIGVG 190
BLAST of mRNA_H-akashiwo_Contig116.15.1 vs. uniprot
Match: A0A6H5FVY7_9HEMI (Reverse transcriptase domain-containing protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FVY7_9HEMI) HSP 1 Score: 166 bits (419), Expect = 7.960e-44 Identity = 88/202 (43.56%), Postives = 127/202 (62.87%), Query Frame = 1
Query: 4 IRSRLDMWEKGEYDELVAAAKRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLTALLVRRGIMLDKKPGLRPIGIG 609
+ R+D+W + +Y+ELV A+RCD + K P +E +R F RL+ + K RE R +TDR+ + L PN + G G+T +E+ + KHP+ P E FL+ LP +V IT I +VAH +KGSAG SGTD+ W+ +LL +G +S LREAVA L ++N ++EW + ALL RRG+ +DKKPG+RPIG+G
Sbjct: 96 VTRRMDLWTEEKYEELVTEAERCDRQMKIHPDNDTEEHKVRNFTRLINKGKLREGTRWITDRANNGAPLQPNTQLEG-----GQTVLEILKNKHPQQEIPGHEMFLNDDLPTLVDVDITEGHILKVAHKLKGSAGPSGTDAEAWRDMLLRFGASSRALREAVADLTRSLANSIVEWDKIKALLARRGVAIDKKPGIRPIGVG 292
BLAST of mRNA_H-akashiwo_Contig116.15.1 vs. uniprot
Match: A0A0A9XTP4_LYGHE (Peptide chain release factor 2 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XTP4_LYGHE) HSP 1 Score: 158 bits (400), Expect = 1.850e-43 Identity = 85/204 (41.67%), Postives = 128/204 (62.75%), Query Frame = 1
Query: 1 LIRSRLDMWEKGEYDELVAAAKRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQP-LPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLTALLVRRGIMLDKKPGLRPIGIG 609
L+ R+ +W + +++ELV A+R D + + K+ +R F RL+ + K RE R +TDR S GVL P + G+T +E+ + KHP TP E F+D LP +++ ++ + I +VAH++KGSAG SGTDS W+ +LL +G S RLR+A+A+L +MSN ++EW + ALL RRG+ LDK PG+RPIG+G
Sbjct: 148 LLIRRMALWRQEKFEELVKEAERSDRQLGNSRKKTDKDHKIRVFTRLVTKGKLREGTRWITDRQTSGGVLQPTSQLAD-----GRTVLEILDAKHPNQMTPDPETFIDSTDLPTMKDIDVSGDHIAKVAHSLKGSAGPSGTDSETWRDMLLRFGAHSSRLRDAIAALVRRMSNGIMEWDKIKALLARRGVALDKNPGVRPIGVG 346
BLAST of mRNA_H-akashiwo_Contig116.15.1 vs. uniprot
Match: A0A0A9WUW4_LYGHE (Uncharacterized protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WUW4_LYGHE) HSP 1 Score: 157 bits (397), Expect = 7.020e-43 Identity = 85/204 (41.67%), Postives = 129/204 (63.24%), Query Frame = 1
Query: 1 LIRSRLDMWEKGEYDELVAAAKRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLD-QPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLTALLVRRGIMLDKKPGLRPIGIG 609
L+ R+++W G+++ELV A+RCD + P ++ ++ +R F RL++ K REA R +TDR G L N G+T +E E KHP P E+FL+ +P E++ ++A+ I +VAH ++GSAG SGTDS W+ +LL +G+ S +LREA+ASL ++N ++EW + ALL RRG+ LDK PG+RPIG+G
Sbjct: 67 LLARRMNLWRDGKFEELVREAERCDRQLGPTPRVNTEDHRVRIFTRLVSRGKLREATRWITDRDTRGGALQLNTLLSD-----GRTVLEELESKHPNQMRPAPESFLNVTEMPTLEDIDVSADHIAKVAHYLRGSAGPSGTDSDAWRDMLLRFGSHSHQLREAIASLVRSLANGIVEWDKIVALLARRGVALDKNPGVRPIGVG 265
BLAST of mRNA_H-akashiwo_Contig116.15.1 vs. uniprot
Match: A0A0K8TJU1_LYGHE (Uncharacterized protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0K8TJU1_LYGHE) HSP 1 Score: 159 bits (401), Expect = 1.660e-42 Identity = 86/204 (42.16%), Postives = 129/204 (63.24%), Query Frame = 1
Query: 1 LIRSRLDMWEKGEYDELVAAAKRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLD-QPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLTALLVRRGIMLDKKPGLRPIGIG 609
L+ R+++W G+++ELV A+RCD + P ++ ++ +R F RL++ K REA R +TDR G L N G+T +E E KHP P E+FL+ +P E++ ++A+ I +VAH ++GSAG SGTDS W+ +LL +G+ S +LREA+ASL +SN ++EW + ALL RRG+ LDK PG+RPIG+G
Sbjct: 110 LLARRMNLWRDGKFEELVREAERCDRQLGPTPRVNTEDHRVRIFTRLVSRGKLREATRWITDRDTRGGALQLNTLLSD-----GRTVLEELESKHPNQMRPAPESFLNVTEMPTLEDIDVSADHIAKVAHYLRGSAGPSGTDSDAWRDMLLRFGSHSHQLREAIASLVRSLSNGIMEWDKIVALLARRGVALDKNPGVRPIGVG 308
BLAST of mRNA_H-akashiwo_Contig116.15.1 vs. uniprot
Match: A0A146L2U3_LYGHE (Uncharacterized protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A146L2U3_LYGHE) HSP 1 Score: 158 bits (400), Expect = 2.440e-41 Identity = 85/204 (41.67%), Postives = 128/204 (62.75%), Query Frame = 1
Query: 1 LIRSRLDMWEKGEYDELVAAAKRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANREVTDRSESSGVLDPNEEAMGKGGPLGKTNIEVFEEKHPKPRTPVKEAFLDQP-LPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLTALLVRRGIMLDKKPGLRPIGIG 609
L+ R+ +W + +++ELV A+R D + + K+ +R F RL+ + K RE R +TDR S GVL P + G+T +E+ + KHP TP E F+D LP +++ ++ + I +VAH++KGSAG SGTDS W+ +LL +G S RLR+A+A+L +MSN ++EW + ALL RRG+ LDK PG+RPIG+G
Sbjct: 148 LLIRRMALWRQEKFEELVKEAERSDRQLGNSRKKTDKDHKIRVFTRLVTKGKLREGTRWITDRQTSGGVLQPTSQLAD-----GRTVLEILDAKHPNQMTPDPETFIDSTDLPTMKDIDVSGDHIAKVAHSLKGSAGPSGTDSETWRDMLLRFGAHSSRLRDAIAALVRRMSNGIMEWDKIKALLARRGVALDKNPGVRPIGVG 346 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig116.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig116.15.1 >prot_H-akashiwo_Contig116.15.1 ID=prot_H-akashiwo_Contig116.15.1|Name=mRNA_H-akashiwo_Contig116.15.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=196bp MWEKGEYDELVAAAKRCDSKFKRRPPLSRKERLLRRFHRLMAERKYREANback to top mRNA from alignment at H-akashiwo_Contig116:383836..384444- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig116.15.1 ID=mRNA_H-akashiwo_Contig116.15.1|Name=mRNA_H-akashiwo_Contig116.15.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=609bp|location=Sequence derived from alignment at H-akashiwo_Contig116:383836..384444- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig116:383836..384444- >mRNA_H-akashiwo_Contig116.15.1 ID=mRNA_H-akashiwo_Contig116.15.1|Name=mRNA_H-akashiwo_Contig116.15.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=588bp|location=Sequence derived from alignment at H-akashiwo_Contig116:383836..384444- (Heterosigma akashiwo CCMP452)back to top |