mRNA_H-akashiwo_Contig1158.9.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1158.9.1 vs. uniprot
Match: W4HAR0_9STRA (TIGR01456 family HAD hydrolase n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAR0_9STRA) HSP 1 Score: 209 bits (531), Expect = 4.090e-59 Identity = 131/324 (40.43%), Postives = 183/324 (56.48%), Query Frame = 2
Query: 221 IGFVIDLDGVLIRGKDVIPGAVQGIEMLKRARIPFLIVTNGGGQTEKEKAISISKRVGTEFAACQVQVSHTPLKLCSDDVKEKLTLVLGPP--NSRELMANYGFHDVITADELHALHPTMWPDEDPAPLGPEARARAARWRQAPVAAVCVVYTPQRWYRDLQIALDMVKS-DGHHGTVAPGGGQGLPLYFAGPDLEYAAEAPAPRLGAGAFLRCLEHLFALTAAGGRPLRATVLGKPHAVTYECAEALLTEQALRTTGRPLRKIYAVGDNPASDVAGANAAGAHWTSVLVETGMFRRQANMDNDPVHPADLVCADFLAAVTQIV 1183
G V D+DGVL+RGK IPGA ++ L + P+ I+TNGGG TE +KA +S + E + Q+ +SHTP++ + + + L +G +RE+M +YGF +V+TA +LH+ P +PD + + + A +R AV V+ P W R++QI +D++ S +G +GT+A Q + LY A D +Y E PR GAGAF LE L+ T G LR T+ GKP ++E AE LL Q L L IY VGDNP +D+ GANAAG W SVL TGMF+ N D+ HPAD V AD A + I+
Sbjct: 15 FGVVFDVDGVLLRGKTPIPGAADVLQHLHDTKTPYAIMTNGGGVTEVKKAEQLSDILKFEIPSTQLCLSHTPMRELASTYENDMVLAVGKSCDKTREVMEHYGFRNVVTASDLHSHFPASYPDISVSKVPHHGKFDANDFR-----AVFVLMDPIYWGREIQIIMDVLTSHEGKYGTLADND-QHVNLYSACSDFQYVGEHHLPRFGAGAFRAVLEDLYMRTT--GTKLRQTLFGKPEPTSFEFAEKLLRHQ-LTAEDERLAAIYMVGDNPYTDIQGANAAGGLWKSVLTRTGMFQGGLNHDD---HPADAVVADVGAGLKWIL 326
BLAST of mRNA_H-akashiwo_Contig1158.9.1 vs. uniprot
Match: A0A197JZF5_9FUNG (HAD-superfamily hydrolase n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JZF5_9FUNG) HSP 1 Score: 209 bits (532), Expect = 6.930e-59 Identity = 130/344 (37.79%), Postives = 190/344 (55.23%), Query Frame = 2
Query: 215 PGIGFVIDLDGVLIRGKDVIPGAVQGIEMLKRARIPFLIVTNGGGQTEKEKAISISKRVGTEFAACQVQVSHTPLKLCSDDVKEKLTLVLGPPNS--RELMANYGFHDVITADELHALHPTMWPDEDPAPLGPEARARAARWRQA-------PVAAVCVVYTPQRWYRDLQIALD-MVKSDGHHGTVAPGGG-----QGLPLYFAGPDLEYAAEAPAPRLGAGAFLRCLEHLFA-LTAAGGRPLRATVLGKPHAVTYECAEALLTE----QALRTTGRPLRK-IYAVGDNPASDVAGANAAGAHWTSVLVETGMFRRQANMDNDPVHPADLVCADFLAAVTQIV 1183
P D+DGVLI+GK VIP + +E+L+ +IP++ +TNGGG E EKA ++K++G + VSH+P++ ++ +V+G S + +YGF +V+T +E+H++HP++ P D RA W + PV AV V + W RDLQ+ LD +V DG GT+ Q +P+YF+ PD+ +A E P PR G G F CLE ++ LT G+PL GKP TYE A++LL + L G+P ++ +YAVGDNP +D+AGAN G W SVLV+TG+FR + N +N +HPA V AV I+
Sbjct: 26 PRFSIAFDIDGVLIKGKQVIPQTRRALELLQENKIPYIFLTNGGGMRESEKADQLTKKLGVYVNPEHLIVSHSPMRSLVSKYRDANVMVVGGKGSACKHAAHDYGFKNVVTPEEIHSVHPSVCPISD-------CETRAEPWTEKGLENVGKPVDAVMVFHDSNDWGRDLQLCLDALVSKDGKLGTIKDSDQLHNTKQTVPIYFSNPDIVWANEYPVPRFGQGTFRVCLEKIYQNLT---GQPLEYVTYGKPMKTTYEYADSLLDKIDPLPKLGPDGQPAKRTVYAVGDNPYADIAGANGHG--WNSVLVKTGVFRPKGN-ENHHLHPATTVVDHVEDAVRWII 356
BLAST of mRNA_H-akashiwo_Contig1158.9.1 vs. uniprot
Match: A0A485KYU9_9STRA (Aste57867_13615 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYU9_9STRA) HSP 1 Score: 208 bits (529), Expect = 7.160e-59 Identity = 127/324 (39.20%), Postives = 180/324 (55.56%), Query Frame = 2
Query: 221 IGFVIDLDGVLIRGKDVIPGAVQGIEMLKRARIPFLIVTNGGGQTEKEKAISISKRVGTEFAACQVQVSHTPLKLCSDDVKEKLTLVLGPP--NSRELMANYGFHDVITADELHALHPTMWPDEDPAPLGPEARARAARWRQAPVAAVCVVYTPQRWYRDLQIALDMVKSDG-HHGTVAPGGGQGLPLYFAGPDLEYAAEAPAPRLGAGAFLRCLEHLFALTAAGGRPLRATVLGKPHAVTYECAEALLTEQALRTTGRPLRKIYAVGDNPASDVAGANAAGAHWTSVLVETGMFRRQANMDNDPVHPADLVCADFLAAVTQIV 1183
+G V D+DGVL+RGK IPGA + ++ LK PF I+TNGGG E++KA +S + E A Q+ +SHTP++ ++++ L +G +R++M +YGF +V+T +LH+ P +PD + ++ AV V+ P W R++QI +D++ S G +GT+A Q + LY A D +Y E PR GAGAF +E L+ T G LR T+ GKP +Y AE LL +Q L +IY VGDNP +D+ GANAAG HW SVL TGM++ N D HP D V AD A+ IV
Sbjct: 15 LGIVFDVDGVLLRGKVPIPGATEVLQHLKTTETPFAIMTNGGGVPEEKKAEQLSDILKFEIPAAQLCLSHTPMRELVPKYEDEMVLAVGKSCDKTRDVMEHYGFRNVVTVTDLHSHFPASYPD-----ISVSKVPHHGKYEDEDFKAVFVLMDPIYWGREIQIIMDVLTSHGGKYGTLADDE-QHVNLYSACSDFQYVGEHHLPRYGAGAFRAVMEDLYHRTT--GTHLRQTLYGKPEQTSYMFAEKLLAKQL--DASETLERIYMVGDNPFTDIKGANAAGDHWKSVLTRTGMYQGVGNHDQ---HPGDAVVADVKEALDWIV 325
BLAST of mRNA_H-akashiwo_Contig1158.9.1 vs. uniprot
Match: A0A067CIS8_SAPPC (HAD-superfamily subfamily IIA hydrolase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CIS8_SAPPC) HSP 1 Score: 206 bits (523), Expect = 5.100e-58 Identity = 125/323 (38.70%), Postives = 181/323 (56.04%), Query Frame = 2
Query: 221 IGFVIDLDGVLIRGKDVIPGAVQGIEMLKRARIPFLIVTNGGGQTEKEKAISISKRVGTEFAACQVQVSHTPLKLCSDDVKEKLTLVLGPP--NSRELMANYGFHDVITADELHALHPTMWPDEDPAPLGPEARARAARWRQAPVAAVCVVYTPQRWYRDLQIALDMVKS-DGHHGTVAPGGGQGLPLYFAGPDLEYAAEAPAPRLGAGAFLRCLEHLFALTAAGGRPLRATVLGKPHAVTYECAEALLTEQALRTTGRPLRKIYAVGDNPASDVAGANAAGAHWTSVLVETGMFRRQANMDNDPVHPADLVCADFLAAVTQI 1180
G V D+DGVL+RGK I GA + +E L+ ++ PF I+TNGGG TE++KA +S+ + E A ++ ++HTP++ ++++ L +G ++E+M NYGF +V+T ++H+ P+ +PD + ++ A AV V+ P W R+LQI +D++ S +G GTV+ Q + +Y A D +Y E PR GAGAF LE L+ T G L T+ GKP +Y AE LL Q LR L +IY VGDNP +D+ GANAAG HW SV TGM+ + N P HP D V D A+ I
Sbjct: 8 FGVVFDVDGVLLRGKTPIAGATRVLESLRDSQTPFAIMTNGGGVTEEKKAAQLSEILDFEIHASRLCLAHTPMRSLVPTYQDEMVLAVGKKCDATKEVMHNYGFRNVVTVSDIHSHFPSSYPD-----IAVPKVPHLGKYDAAAFKAVFVLMDPIYWGRELQIIMDVLTSHEGQIGTVSDD--QHVNMYSACSDFQYVGEHHLPRFGAGAFRAVLEDLYTRTT--GDHLTQTLFGKPEKTSYAFAETLLQSQ-LRANVDALDRIYMVGDNPFTDIKGANAAGDHWKSVFTRTGMYTAPRGV-NHPEHPGDAVVDDVAEALAWI 319
BLAST of mRNA_H-akashiwo_Contig1158.9.1 vs. uniprot
Match: A0A6G0XWS7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWS7_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.150e-57 Identity = 126/325 (38.77%), Postives = 180/325 (55.38%), Query Frame = 2
Query: 221 IGFVIDLDGVLIRGKDVIPGAVQGIEMLKRARIPFLIVTNGGGQTEKEKAISISKRVGTEFAACQVQVSHTPLKLCSDDVKEKLTLVLGPP--NSRELMANYGFHDVITADELHALHPTMWPDEDPAPLGPEARARAARWRQAPVAAVCVVYTPQRWYRDLQIALDMVKS-DGHHGTVAPGGGQGLPLYFAGPDLEYAAEAPAPRLGAGAFLRCLEHLFALTAAGGRPLRATVLGKPHAVTYECAEALLTEQALRTTGRPLRKIYAVGDNPASDVAGANAAGAHWTSVLVETGMFRRQANMDNDPVHPADLVCADFLAAVTQIVD 1186
+G V D+DGVL+RGK IPGA ++ LK + PF I+TNGGG E +KA +S + + A Q+ +SHTP++ +E++ L +G +R +M +YGF +V+T +LH+ P +PD + + ++ AV V+ P W R++Q+ +D++ S +G +GT+A Q + LY A D +Y E PR GAGAF LE L+ T G LR T+ GKP +Y AE LL +Q T L IY VGDNP +D+ GANAAG+HW SVL TGM++ N D HP D V D + I+D
Sbjct: 15 LGVVFDVDGVLLRGKVPIPGAKDVLQHLKDTKTPFAIMTNGGGVPEAKKAEQLSDILKFDIPASQLCLSHTPMRDLVSKYEEEMILAVGKSCDKTRAVMEHYGFRNVVTVSDLHSHFPASYPD-----ISVDKVHHHGKYENEDFKAVFVLMDPIYWGREIQLIMDVLTSHEGKYGTLADA--QHVNLYSACSDFQYVGEHHLPRYGAGAFRAVLEDLYFRTT--GAHLRQTLFGKPERTSYAFAEKLLAKQLDADT--ELASIYMVGDNPFTDIKGANAAGSHWKSVLTRTGMYQGVGNHDE---HPGDAVVMDVNEGLKWILD 325
BLAST of mRNA_H-akashiwo_Contig1158.9.1 vs. uniprot
Match: A0A1X2GYB1_9FUNG (HAD-superfamily hydrolase n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GYB1_9FUNG) HSP 1 Score: 204 bits (520), Expect = 2.250e-57 Identity = 130/327 (39.76%), Postives = 186/327 (56.88%), Query Frame = 2
Query: 227 FVIDLDGVLIRGKDVIPGAVQGIEML-----KRARIPFLIVTNGGGQTEKEKAISISKRVGTEFAACQVQVSHTPLKLCSDDVKEKLTLVLGPPNSR--ELMANYGFHDVITADELHALHPTMWPDEDPAPLGPEARARAARWRQAPVAAVCVVYTPQRWYRDLQIALDMVKS-DGHHGTVAPG-GGQGLPLYFAGPDLEYAAEAPAPRLGAGAFLRCLEHLF-ALTAAGGRPLRATVLGKPHAVTYECAEALLTEQALRTTGRPL--RKIYAVGDNPASDVAGANAAGAHWTSVLVETGMFRRQANMDNDPVHPADLVCADFLAAV 1171
F D+DGVLI+GK IP A + + +L ++ ++PF+++TNGGG TE KA IS VG + QV +SH+P++ + KE+ LV+G L YGF V+T +++H + ++WP P E R + + PV AV V + W RDLQ LD V S DG T Q +PLYF+ DL ++ + P RLG G F LE L+ LT G+PL++T GKPH TY AE +++ Q R TG+ +YA+GDNPA+D+ GANA G W+S+LV++G+F+ N P++PAD VC + L AV
Sbjct: 22 FAFDIDGVLIKGKRTIPQANKALRLLNGDNPRQRKVPFVLLTNGGGMTEASKAEQISDMVGVKIDPDQVIMSHSPMQALAKKYKERRVLVVGGKGDACTRLAQGYGFEKVVTPNDVHLWNTSLWPYSQPTG---EPRVNVD-FSKEPVEAVMVFHDSYDWGRDLQTTLDAVCSQDGIMTTTKSDFSTQTMPLYFSNNDLVWSTDYPVNRLGQGGFKVALEGLYHTLT---GQPLQSTSYGKPHGTTYAFAEQVISRQVQRQTGQVYVPTHVYAIGDNPAADIKGANAHG--WSSILVKSGVFKGPGN---SPLYPADHVCDNVLDAV 336
BLAST of mRNA_H-akashiwo_Contig1158.9.1 vs. uniprot
Match: A0A2D4BVA6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVA6_PYTIN) HSP 1 Score: 204 bits (519), Expect = 3.330e-57 Identity = 119/342 (34.80%), Postives = 181/342 (52.92%), Query Frame = 2
Query: 167 ANQAQLNGRSNEERGHPGIGFVIDLDGVLIRGKDVIPGAVQGIEMLKRARIPFLIVTNGGGQTEKEKAISISKRVGTEFAACQVQVSHTPLKLCSDDVKEKLTLVLGPPNSRELMANYGFHDVITADELHALHPTMWP----DEDPAPLGPEARARAARWRQAPVAAVCVVYTPQRWYRDLQIALDMVKSDGHHGTVAPGGGQGLPLYFAGPDLEYAAEAPAPRLGAGAFLRCLEHLFALTAAGGRPLRATVLGKPHAVTYECAEALLTEQALRTTGRPLRKIYAVGDNPASDVAGANAAGAHWTSVLVETGMFRRQANMDNDPVHPADLVCADFLAAVTQI 1180
A++A L+ S P G D+DGVL+RG +P A I L+ +P + +TNGGG E EKA ++ + + + Q+ +SHTP++ + K+ L++G + + YGF+ V++ ++L HPT +P + PAP E P+ A+ +++ P W ++Q+A+D++ G+ P G Q PL+ + D ++ P PR GAF RCL+ L+ G+PL T GKPH VTY AE LL A R+ PL IY +GDNP +D+ GAN AGAHWTSVLV TG++ + +P H D+ D A+ +I
Sbjct: 18 ASRASLHSASTNT---PSFGIAFDIDGVLVRGGKELPRARDIILRLREDNVPHIFLTNGGGCMEAEKAANLGRALDLDIEPRQMVLSHTPMRELVEKFKDSRVLIMGSYDVYNVAREYGFNKVVSVNDLVQQHPTQYPFHKYEHKPAPFHGE-----------PIEAIIIMHDPIDWAPEIQVAVDVLIGGDPPGSGRPCGTQ-TPLFVSNDDFVFSGAYPHPRFAQGAFTRCLQLLYETHT--GKPLEVTRYGKPHGVTYSFAEDLLNTLAGRSESNPLSSIYGIGDNPLADIQGANNAGAHWTSVLVRTGIY----DGSKEPEHIPDVFAHDVHEAIERI 338
BLAST of mRNA_H-akashiwo_Contig1158.9.1 vs. uniprot
Match: G4ZYJ8_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZYJ8_PHYSP) HSP 1 Score: 202 bits (513), Expect = 2.710e-56 Identity = 143/353 (40.51%), Postives = 187/353 (52.97%), Query Frame = 2
Query: 155 RGGSANQAQLNGRSNEERGHPGIGFVIDLDGVLIRGKDVIPGAVQGIEMLKRARIPFLIVTNGGGQTEKEKAISISKRVG--TEFAACQVQVSHTPLKLCSDDVKEKLTLVLGPPNS--RELMANYGFHDVITADELHALHPTMWPD-EDPAPLGPEARARAARWRQAPVAAVCVVYTPQRWYRDLQIALDMVKS-DGHHGT-VAPGGGQG----LPLYFAGPDLEYAAEAPAPRLGAGAFLRCLEHLFALTAAGGRPLRATVLGKPHAVTYECAEALLTEQALRTTGRPLRKIYAVGDNPASDVAGANAAGAHWTSVLVETGMFRRQANMDNDPVHPADLVCADFLAAVTQI 1180
RG S+++ GR R G V D+DGVL+RGK IPGA + + L+ PF I+TNGGG E +KA I + +G ++ +SHTP++ +D E+L L +G + RE+MANYGF V+T D+LH PTM+PD + P PL A R+ P AAV V+ P W R+LQI +D++ S DG G G G G +PLY A D +Y E PR GAGAF LE LF T G L T+ GKP ++E AE L+ Q + +IY VGDNP +D+ GAN AG W SVL TGM N + HPA V D A+ I
Sbjct: 2 RGSSSSRGNAVGR----RAASTFGVVFDVDGVLLRGKTPIPGAREVLLELQATDTPFAIMTNGGGYPEDKKAQQIEQILGGGVSIPNERMCMSHTPMRALADKHGEELVLAVGKDCAELREVMANYGFKHVVTVDQLHQHFPTMYPDVKVPRPL-----AHNGRFNSQPFAAVFVLIDPIYWGRELQIVMDVLCSPDGLLGQRTVEGDGNGERQHIPLYSACSDFQYVGEFHLPRYGAGAFHAVLEDLFTRTT--GHKLEKTLFGKPQRTSFEFAETLIDAQH-----EDVERIYMVGDNPKTDIRGANEAGGRWKSVLTLTGMHNGPENHEE---HPAYEVVDDVAQALAFI 335
BLAST of mRNA_H-akashiwo_Contig1158.9.1 vs. uniprot
Match: S2JIS9_MUCC1 (HAD-superfamily subfamily IIA hydrolase n=4 Tax=Mucor TaxID=4830 RepID=S2JIS9_MUCC1) HSP 1 Score: 201 bits (512), Expect = 5.680e-56 Identity = 126/333 (37.84%), Postives = 183/333 (54.95%), Query Frame = 2
Query: 215 PGIGFVIDLDGVLIRGKDVIPGAVQGIEMLK-----RARIPFLIVTNGGGQTEKEKAISISKRVGTEFAACQVQVSHTPLKLCSDDVKEKLTLVLGPP--NSRELMANYGFHDVITADELHALHPTMWPDEDP-APLGPEARARAARWRQAPVAAVCVVYTPQRWYRDLQIALDMVKS-DGHHGTVAPGGG-QGLPLYFAGPDLEYAAEAPAPRLGAGAFLRCLEHLFALTAAGGRPLRATVLGKPHAVTYECAEALLTEQALRTTGRPLRKIYAVGDNPASDVAGANAAGAHWTSVLVETGMFRRQANMDNDPVHPADLVCADFLAAVTQIV 1183
P F D+DGVLI+GK IP A + +++L IPF+++TNGGG TE+EKA IS+ VG + QV +SH+P++ + +K L++G N ++ YGF + +T ++ + + WP P + L A + P+ AV V + W RDLQI LD + S DG GT Q +PLY++ DL ++ + PAPRLG GAF L+ L+ G L++T GKPH TY+ AE +L + R++YA+GDNPA+D+ GAN G WTSVLV TG+F + N + PAD+VC + AV I+
Sbjct: 32 PNYAFAFDIDGVLIKGKRRIPEATRALKLLNGDNIHNRNIPFVLLTNGGGVTEEEKARQISELVGVKIDPKQVILSHSPMQNLATKYNDKRVLIVGGKGRNCYDVAKKYGFKEAVTPHDIMHWNSSSWPHSTPTSDLSMLTSTAALEFSNLPIHAVMVFHDTYDWGRDLQIMLDALCSQDGIIGTRKSDYAIQDVPLYWSNNDLIWSTDFPAPRLGQGAFKIALDSLYKTLT--GHDLKSTSFGKPHGATYQFAEQVLASLEPESHQPNRRRVYAIGDNPAADIQGANGYG--WTSVLVRTGVFTGKGNSSD---FPADIVCENVEEAVESII 357
BLAST of mRNA_H-akashiwo_Contig1158.9.1 vs. uniprot
Match: A0A8H7Q1U4_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q1U4_9FUNG) HSP 1 Score: 202 bits (514), Expect = 5.760e-56 Identity = 128/340 (37.65%), Postives = 194/340 (57.06%), Query Frame = 2
Query: 191 RSNEERGHPGIGFVIDLDGVLIRGKDVIPGAVQGIEMLKRA-----RIPFLIVTNGGGQTEKEKAISISKRVGTEFAACQVQVSHTPLKLCSDDVKEKLTLVLG--PPNSRELMANYGFHDVITADELHALHPTMWP----DEDPAPLGPEARARAARWRQAPVAAVCVVYTPQRWYRDLQIALDMVKS-DGHHGTV-APGGGQGLPLYFAGPDLEYAAEAPAPRLGAGAFLRCLEHLFALTAAGGRPLRATVLGKPHAVTYECAEALLTEQALRTTGRPLRKIYAVGDNPASDVAGANAAGAHWTSVLVETGMFRRQANMDNDPVHPADLVCADFLAAV 1171
R + P GF +D+DGVLI+G VIP A + + +L +IPF+++TNGGG TE++KA +S+++ + QV +SH+P++ K+ LV+G + +++ YGF I D++H ++WP +D A EA+ R R+ P+ A+ + + + W RDLQI +D+++S +G GT A Q P+YF+ PD ++ E P PR G GAF LE ++ G+ L++T GKPH TY+ AE +L +L PL++++AVGDNPA+D+AGANA G WTS+LV TG+F + N PA LVC D AV
Sbjct: 54 RFHSTTNQPKFGFALDIDGVLIKGNRVIPQAQRALRLLNGENASGKKIPFVLLTNGGGVTEEKKAAQMSRKLDMDILPSQVVLSHSPMRSLVKKYKDTPVLVVGGRETSCKDVAEQYGFQRPIQPDDIHHWEKSVWPFRRVTDDEAY---EAQKRYDFSRE-PIEAIMMFHDSRDWGRDLQIMMDVLRSKNGMIGTQKADYSVQDTPVYFSNPDFLWSNEFPVPRYGQGAFKTALEAIYKQHT--GKELKSTSFGKPHRATYQYAEKILN--SLLPNNTPLQRVFAVGDNPAADIAGANAYG--WTSILVRTGVFDGKGNSSE---FPAKLVCDDIEEAV 380 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1158.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1158.9.1 >prot_H-akashiwo_Contig1158.9.1 ID=prot_H-akashiwo_Contig1158.9.1|Name=mRNA_H-akashiwo_Contig1158.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=504bp MTRGGSANQAQLNGRSNEERGHPGIGFVIDLDGVLIRGKDVIPGAVQGIEback to top mRNA from alignment at H-akashiwo_Contig1158:235168..238590+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1158.9.1 ID=mRNA_H-akashiwo_Contig1158.9.1|Name=mRNA_H-akashiwo_Contig1158.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=3423bp|location=Sequence derived from alignment at H-akashiwo_Contig1158:235168..238590+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1158:235168..238590+ >mRNA_H-akashiwo_Contig1158.9.1 ID=mRNA_H-akashiwo_Contig1158.9.1|Name=mRNA_H-akashiwo_Contig1158.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1512bp|location=Sequence derived from alignment at H-akashiwo_Contig1158:235168..238590+ (Heterosigma akashiwo CCMP452)back to top |