mRNA_H-akashiwo_Contig1158.8.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1158.8.1
Unique NamemRNA_H-akashiwo_Contig1158.8.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig1158.8.1 vs. uniprot
Match: A0A6V1P7Q5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7Q5_HETAK)

HSP 1 Score: 540 bits (1391), Expect = 4.850e-189
Identity = 284/290 (97.93%), Postives = 284/290 (97.93%), Query Frame = 1 
Query:    1 LDVFLLILGGYNILYEVYQATTDFSPDFWNLLDWTYYVLLVVNSVFSLLDRAIWELGAVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDTYTGYDXXAGYIVWTFLLMNQIVWDSNFWEDSVSPVLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTAKEREKVEQKFRWIHVMTPWDIDSSSAAQDRGRGRRRGP-AVAVLENKVRILEGRIAAQAAEIRESNELLAKFYADFEAEE 867
            LDVFLLILGGYNILYEVYQATTDFSPDFWNLLDWTYYVLLVVNSVFSLLDRAIWELGAVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDTYTGYDXXAGYIVWTFLLMNQIVWDSNFWEDSVSPVLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTAKEREKVEQKFRWIHVMTPWDIDSSSAAQD G G  RG  AVAVLENKVRILEGRIAAQAAEIRESNELLAKFYADFEAEE
Sbjct:  238 LDVFLLILGGYNILYEVYQATTDFSPDFWNLLDWTYYVLLVVNSVFSLLDRAIWELGAVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDTYTGYDXXAGYIVWTFLLMNQIVWDSNFWEDSVSPVLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTAKEREKVEQKFRWIHVMTPWDIDSSSAAQDSGEGGARGSSAVAVLENKVRILEGRIAAQAAEIRESNELLAKFYADFEAEE 527
[Close]
BLAST of mRNA_H-akashiwo_Contig1158.8.1 vs. uniprot
Match: A0A6V1P600_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P600_HETAK)

HSP 1 Score: 441 bits (1134), Expect = 4.950e-154
Identity = 235/241 (97.51%), Postives = 235/241 (97.51%), Query Frame = 1 
Query:  148 DRAIWELGAVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDTYTGYDXXAGYIVWTFLLMNQIVWDSNFWEDSVSPVLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTAKEREKVEQKFRWIHVMTPWDIDSSSAAQDRGRGRRRGP-AVAVLENKVRILEGRIAAQAAEIRESNELLAKFYADFEAEE 867
            DRAIWELGAVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDTYTGYDXXAGYIVWTFLLMNQIVWDSNFWEDSVSPVLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTAKEREKVEQKFRWIHVMTPWDIDSSSAAQD G G  RG  AVAVLENKVRILEGRIAAQAAEIRESNELLAKFYADFEAEE
Sbjct:   18 DRAIWELGAVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDTYTGYDXXAGYIVWTFLLMNQIVWDSNFWEDSVSPVLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTAKEREKVEQKFRWIHVMTPWDIDSSSAAQDSGEGGARGSSAVAVLENKVRILEGRIAAQAAEIRESNELLAKFYADFEAEE 258
[Close]
BLAST of mRNA_H-akashiwo_Contig1158.8.1 vs. uniprot
Match: A0A7S3Y6C5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C5_HETAK)

HSP 1 Score: 161 bits (408), Expect = 3.650e-42
Identity = 97/261 (37.16%), Postives = 151/261 (57.85%), Query Frame = 1 
Query:    1 LDVFLLILGGYNILYEVYQATTDFSP---------DFWNLLDWTYYVLLVVNSVFSLLD-RAIWELGAVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDT-YTG-----------YDXXAGYIVWTFLLMNQIVWDSNFWEDSVSPVLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTAKEREKVEQKFRWIHVMTPWDIDSSSAAQD 717
            L V L+    YN LYE+YQ    +           D W+ LDWTYY  + V +V +L +     +LGAVNVVLS +E+LFYMRGF    FL+  + Q  +DL PF+++V  ++ AF+ +F+++   D  Y G           Y+    Y+   FL +  IV+ S+ +  S+SP L   L  LF+ VT I++LN II+IL  TY+ V+  A++EG+RERA+I+LE++ YL+ +  E +  +F+W+H++ P   D    A++
Sbjct:  189 LSVILIASSAYNTLYELYQLKLQYKKNGDVWESLLDPWSWLDWTYYTTVWVAAVLNLTNTNGFRQLGAVNVVLSSIEVLFYMRGFKAIAFLISALKQSVADLGPFLVIVFALLLAFSAAFFSLYDKDADYEGVVSSGFGGSYLYNGVDRYLFHNFLALLGIVFQSDAFLASISPGLEMFLYTLFIMVTLIVLLNLIISILSGTYAEVALTAKAEGLRERASIILEMSTYLSRRREEWLATQFKWVHLLAPMATDEECPAEE 449
[Close]
BLAST of mRNA_H-akashiwo_Contig1158.8.1 vs. uniprot
Match: A0A078B3S2_STYLE (Wd-40 repeat protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078B3S2_STYLE)

HSP 1 Score: 85.9 bits (211), Expect = 4.400e-15
Identity = 59/238 (24.79%), Postives = 130/238 (54.62%), Query Frame = 1 
Query:   16 LILGGYNILYEVYQATTD---FSPDFWNLLDWTYYVLLVVNSVFSLLDRAIWELG--------AVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDT----YTGYDXXAGYIVWTFLLMNQIVWDSNFWEDSVSPVLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTAKEREKVEQKFRWIHVMTP 684
            L+  GY +L E+ Q T     +    WN +D    + +V+  +   L+   +++         +++ +   +++L+ MR F  TG+L+RM+++V SD+  F++++++ I AF  SF  ++ G++    +  +   AG  V+  +L +   WD++ + +   P++  + V   +F   I+MLN +IAI+ DTY++V++N+   G +E A ++ E  + +    ++K  +K +++ ++ P
Sbjct:  460 LVFSGYFLLMELKQFTLQKIMYIAQMWNYIDLIAPLGVVIIQIIQFLEINEYQINEDFNRSILSISTLFMWIKLLYVMRIFKNTGYLIRMLIEVVSDMGIFLLLLLITILAFGDSFLRLSNGNSEDSQFIEHFFYAGLYVYRMILGD---WDTDAFGEISLPLVWILFVMCTIF-DMIVMLNLLIAIISDTYATVAENSEQAGFQEMAKLIEENEYLVPYHIKKKQAKKMQYLLLIDP 693
[Close]
BLAST of mRNA_H-akashiwo_Contig1158.8.1 vs. uniprot
Match: A0A8J1ZCY6_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1ZCY6_9DINO)

HSP 1 Score: 77.4 bits (189), Expect = 3.020e-12
Identity = 56/217 (25.81%), Postives = 110/217 (50.69%), Query Frame = 1 
Query:   85 WNLLDWTYYVLLVVNSVFSLLDRAIWELG-----------AVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDTYTGYDXXAGYIVWTFLLMNQIVWDSNFWEDSVSPVLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTAKEREKVEQKFRWIHVMTPWDIDSS 702
            WN+ D    V+L V +  + LD A   +             ++V+++ M++ ++ + F   G  +RM++++F D++ F++VV + +  F  +FY +   D    Y   A  ++  ++ M    W+   + D+  P+L  +L C+F FV  II+ N +IAI+ DT+  V +N  +  +R RA+++ +L      K   +      W+H + P + D+S
Sbjct:  424 WNMFD-IVLVILNVLTFIAYLDAAGHTVAFLTKDYLITGVTISVLMAWMKLFYFCQPFRNIGSFIRMLIEIFVDIRYFLIVVSIALLGFGTAFYVLYKDDPQP-YPDRAKTLLSVYVTMLGD-WNVEHFTDTQHPLLATILFCIFTFVMVIILFNLLIAIMSDTFERVRENEENTFLRTRADMICDLQ-----KLSFRKINYLPWVHALLPAEKDAS 632
[Close]
BLAST of mRNA_H-akashiwo_Contig1158.8.1 vs. uniprot
Match: A0A7S1SZW0_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SZW0_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 3.270e-12
Identity = 64/251 (25.50%), Postives = 122/251 (48.61%), Query Frame = 1 
Query:   40 LYEVYQATTD----FSPDFWNLLDWTYYVLLVVNSVFSLLDRAIWE-LGAVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDTYTGYDXXAGYIVWTFLL-------MNQI--VWDSNFWE------------------DSVSP--VLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTAKEREKVEQKF--RWIHVMTP 684
            +YEV Q   +    +  D W++LD    +L ++  V  +    +   + +V V  S +++ +++R FT TG LVRMVVQ+  D++  +++++V++ A A +F+ +       G       + W   L       M ++  V   ++W+                  DS+    VL   L  ++     +++LN +IA++GD+Y  V + A++E +RERA +++E+   L A +R      F  RW+H + P
Sbjct:  209 MYEVLQIRAEGLAMYLGDLWSVLDVWVLLLGLLTGVLGMTSTHVTPAVSSVAVFFSWLKVFYFLRAFTTTGSLVRMVVQIGYDMRYLLVLLIVVMFAAASAFFVLMPMHYAPGESDSCDLVEWRTALDAGDAVQMAELNCVPPLSYWDTILQAFAIMLGAFDITAFDSLLEYRVLGQGLFIVYAVFQMVLLLNLLIALMGDSYEKVQEKAKTEALRERAGLLVEIE--LVAGQRYLQRNHFCPRWLHALVP 457
[Close]
BLAST of mRNA_H-akashiwo_Contig1158.8.1 vs. uniprot
Match: A0A078B6F8_STYLE (Wd-40 repeat protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078B6F8_STYLE)

HSP 1 Score: 75.9 bits (185), Expect = 3.550e-12
Identity = 52/212 (24.53%), Postives = 118/212 (55.66%), Query Frame = 1 
Query:   85 WNLLDWTYYVLLVVNSVFSLLDRAIWELG--------AVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDT----YTGYDXXAGYIVWTFLLMNQIVWDSNFWEDSVSPVLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTAKEREKVEQKFRWIHVMTP 684
            WN +D    + +V+  +   L+   +++         +++ +   +++L+ MR F  TG+L+RM+++V SD+  F++++++ I AF  SF  ++ G++    +  +   AG  V+  +L +   WD++ + +   P++  + V   +F   I+MLN +IAI+ DTY+ V++N+   G +E A ++ E  F +    +++  +K +++ ++ P
Sbjct:    7 WNYIDLIAPLGVVIIQIIQFLEINDYQINEDFNRSILSISTLFMWIKLLYVMRIFKNTGYLIRMLIEVVSDMGIFLLLLLITILAFGDSFLRLSNGNSEDSQFIEHFFYAGLYVYRMILGD---WDTDTFGEISLPLVWILFVMCTIF-EMIVMLNLLIAIISDTYAHVAENSEQAGFQEMAKLIEENEFLVPYHIKKQQAKKMQYLLLIDP 214
[Close]
BLAST of mRNA_H-akashiwo_Contig1158.8.1 vs. uniprot
Match: A0A7S1U4Q3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4Q3_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.370e-11
Identity = 55/177 (31.07%), Postives = 92/177 (51.98%), Query Frame = 1 
Query:  199 EMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDT-------YTGYDXXAGYIVWTFLLMNQIVWDSNFWE--DSVSPVLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTA--KEREKVEQKFRWIHVMTPWDID 696
            +MLF+M+    TG LVRM V++   +  F  ++++ I  F  SF  +   +        + GY   +  +V TF +M   + D +  +   S SP L  +L+ +FLF+T I++LN +IAI+GD Y  V +NA +E    RA I+LE    + A  KE+ + +    WI  +    ++
Sbjct:  510 QMLFFMQSGGRTGALVRMSVKITGSIVVFCFLLLIFILTFGASFMLLFLPEEADLDSLEFNGYTKYSNALVTTFAMM---LGDFSIQDLHASASPPLATLLLIIFLFITGIVLLNLLIAIMGDKYDEVQENALAESKYARARIVLEYEQVIPAMKKEQSRADWYPEWIQALRKGSVE 683
[Close]
BLAST of mRNA_H-akashiwo_Contig1158.8.1 vs. uniprot
Match: A0A8J8TAA2_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8TAA2_HALGN)

HSP 1 Score: 74.3 bits (181), Expect = 3.390e-11
Identity = 58/232 (25.00%), Postives = 117/232 (50.43%), Query Frame = 1 
Query:    7 VFLLILGGYNILYEVYQATT----DFSPDFWNLLDWTYYVLLVVNSVFSLLDRAIWE--LGAVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDTYTGYDXXAGYIVWT-----FLLMNQ----IVWDSNFWEDSVSPVLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTAKEREKVEQK 657
            V L +L GY +L E  Q ++     +  D WN +D+   ++++  ++ S      WE    +V  +   +++L+++R +  TG+L+RM+V+V   +K F++++++ I+A A +F ++   D    Y+   G+ VW      F  + Q    I+    F       +    L         I+MLN +I+I+G+ Y  V +N  +E  +E+A I+ E  + +  +E +K+ ++
Sbjct:  496 VALFLLSGYFLLNECRQISSVGASSYFKDPWNYIDFPPPLIVITIAIVSFAGIDSWEAPFKSVGSLFMWLKLLYFLRLYDSTGYLIRMIVKVIFRMKTFLLLLLITITAVADAFISIQVDDAQE-YNGFFGF-VWHRIKIFFAAVTQTYFLILGGDQFTVGDGFEIFATFLTIFSTLFVMIVMLNLLISIVGEIYGKVQENMINESYQEKATIISENQYLIPQEELDKISKE 725
[Close]
BLAST of mRNA_H-akashiwo_Contig1158.8.1 vs. uniprot
Match: J9IAV4_9SPIT (Glrp1 protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IAV4_9SPIT)

HSP 1 Score: 74.3 bits (181), Expect = 4.140e-11
Identity = 59/225 (26.22%), Postives = 119/225 (52.89%), Query Frame = 1 
Query:   67 DFSPDFWNLLDWTYYVLLVVNSVF----SLLDRAIWELGAVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVVVIISAFAGSFYTMNTGDTYTGYDXXAGYIVWTFLLMNQIVWDSNFWEDSVSPVLNHV--LVCLFLFVTA-----IIMLNFIIAILGDTYSSVSQNARSEGMRERANIMLELNFYLTAKEREKVEQKFRWIHVMTPWDIDSSSA 708
            D+  DFWN  D   Y L ++  +F    S+ +     + ++ +++  +++ +++R F  T  L+RM++++ +D+K F+MV+ + I  F+G FY +  G T    D   G +  + +   ++    +F  D     LN V  ++  FLFVT      I++LN +IAI+GDT+S V +N  +  +RE+  ++ E        +R+ + +  +++ ++   ++DS  A
Sbjct: 2244 DYFTDFWNFSDLFSYTLCLLVVLFDRIPSVPNSVNRPIASLCLIILWIKLFYFLRVFESTSRLIRMIIEIVNDMKNFLMVLTIGIIGFSGGFYILQQGLTQEA-DGTPGNVFMSIIYSYRLA-QGDFQLDFFDQ-LNTVDYILAWFLFVTGSLFLVIVLLNLLIAIMGDTFSRVLENITNLSVREKVMLVSENESLF---DRQSLFKSAQFLIIINEKNLDSVQA 2462
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1158.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1P7Q5_HETAK4.850e-18997.93Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V1P600_HETAK4.950e-15497.51Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6C5_HETAK3.650e-4237.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A078B3S2_STYLE4.400e-1524.79Wd-40 repeat protein n=1 Tax=Stylonychia lemnae Ta... [more]
A0A8J1ZCY6_9DINO3.020e-1225.81Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
A0A7S1SZW0_9CHLO3.270e-1225.50Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A078B6F8_STYLE3.550e-1224.53Wd-40 repeat protein n=1 Tax=Stylonychia lemnae Ta... [more]
A0A7S1U4Q3_9STRA1.370e-1131.07Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8J8TAA2_HALGN3.390e-1125.00Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
J9IAV4_9SPIT4.140e-1126.22Glrp1 protein n=1 Tax=Oxytricha trifallax TaxID=11... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1158contigH-akashiwo_Contig1158:165544..174902 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog946362.XP_004987873.1
PFAMsAnk,Ank_2,Ank_4,Ank_5,Ion_trans,NACHT,WD40
Model size871
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue2.42e-13
EggNOG OGsCOG0666@1|root,KOG0510@2759|Eukaryota
Descriptiontemperature-gated cation channel activity
Cds size867
COG categoryZ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1158.8.1prot_H-akashiwo_Contig1158.8.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1158 165544..174900 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387101.1595564-CDS-H-akashiwo_Contig1158:165543..1656001681387101.1595564-CDS-H-akashiwo_Contig1158:165543..165600Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1158 165544..165600 +
1681387101.1718643-CDS-H-akashiwo_Contig1158:165921..1660121681387101.1718643-CDS-H-akashiwo_Contig1158:165921..166012Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1158 165922..166012 +
1681387101.1865783-CDS-H-akashiwo_Contig1158:170682..1708961681387101.1865783-CDS-H-akashiwo_Contig1158:170682..170896Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1158 170683..170896 +
1681387101.1972456-CDS-H-akashiwo_Contig1158:171437..1716451681387101.1972456-CDS-H-akashiwo_Contig1158:171437..171645Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1158 171438..171645 +
1681387101.2062316-CDS-H-akashiwo_Contig1158:172144..1723421681387101.2062316-CDS-H-akashiwo_Contig1158:172144..172342Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1158 172145..172342 +
1681387101.2153661-CDS-H-akashiwo_Contig1158:174801..1749001681387101.2153661-CDS-H-akashiwo_Contig1158:174801..174900Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1158 174802..174900 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1158.8.1

>prot_H-akashiwo_Contig1158.8.1 ID=prot_H-akashiwo_Contig1158.8.1|Name=mRNA_H-akashiwo_Contig1158.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=289bp
LDVFLLILGGYNILYEVYQATTDFSPDFWNLLDWTYYVLLVVNSVFSLLD
RAIWELGAVNVVLSCMEMLFYMRGFTYTGFLVRMVVQVFSDLKPFMMVVV
VIISAFAGSFYTMNTGDTYTGYDGYAGYIVWTFLLMNQIVWDSNFWEDSV
SPVLNHVLVCLFLFVTAIIMLNFIIAILGDTYSSVSQNARSEGMRERANI
MLELNFYLTAKEREKVEQKFRWIHVMTPWDIDSSSAAQDRGRGRRRGPAV
AVLENKVRILEGRIAAQAAEIRESNELLAKFYADFEAEE
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mRNA from alignment at H-akashiwo_Contig1158:165544..174902+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1158.8.1 ID=mRNA_H-akashiwo_Contig1158.8.1|Name=mRNA_H-akashiwo_Contig1158.8.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=9359bp|location=Sequence derived from alignment at H-akashiwo_Contig1158:165544..174902+ (Heterosigma akashiwo CCMP452)
TTGGATGTTTTCCTTCTGATACTGGGAGGTTACAACATTCTGTACGAGGT
GTACCAGGTGGGTCGCTTTTTTTTTGTGTTTGTCTGGTCAACTTGTGCGC
ATGCCGCGCCTGTGCGCAAGGTTTGGGCTAACCATGGCCTTTGATGATAC
TTGTTCATTGCGCATGCCATGTTAAATTTGAATGAGCGTACGTATAATTT
TGTTGAAAGTAAAACCAACTGTACAGGCCAATTCGGATATAGTAGTGGTC
GGGGAAAACGACAAGTTCTTCTTTTCTTTACATGTTACTATTTTTATTGT
TGTGTTTGTTGAGGGGAGGGGCATGTTTCTCTAGTTCTGCCCTGCTGTGC
CCCCCCTGCCCCCCCGCCCCCCCTGCAGGCCACGACGGACTTCTCCCCTG
ACTTCTGGAACCTGCTGGATTGGACCTACTACGTGCTGCTGGTGGTGAAC
TCAGTGTTCTCCCTGCTGGGTGCACCCCCTTCCCCTTCCCTTCCTTCAAC
TTCAACTTCCCTGCCCCCACCGCCAGGGTGATGGCAAGCCCTTTCATGAA
CTAAGCTACATCATTGTCATCGTGTGGCGGTTGTTTTCAGAAACTGCAAA
TCCAAGGAGCACTGACCCAGAAATGTTTGTATTCGTTCGTACTTTCGGTG
TCCAAGGTCCAACCCCCAAAACATCATATGGTGCAATTAGCAGAGGCCTA
TGTTTGAAGGTTTTTTGGTCGTAGCTCGTCTCGTACATCGCAAATCGAAA
AACTGATGATAGGTTGCACTGGGCAACTTTATTGTGGGTGGTCAAAAAGT
GACTTAAAAAAAAAAAATCGCTGGCCATGGACCGTTTTTTTGGATTCTAC
GCATAAAGTTGCCCAGTAAAACGTATGTTCAGTTTTTTCGATTTGTGATG
TACGAGACGAGCTAAAACCTATTGAAGGTCCAGTTTGGTTGTGGTTGTTT
GACCGGTTTTGAATTTCCGTAACCCGAAATTCTAAAACACCACACCACCA
CATCGAATTTCTTCTTCTTCCCTTTCGATATATATGTACAGCGACAAAAA
GAACGGGGGCCACGACAGGATCTCATAACAACGTGGTTACTCCAAGGTGA
GGCGGACAACACCACAAACTGAATTCAATAATTGTCGTCAGTACCAATGG
CAAGGCTCAGTGCCACCGGGGAATCATTTTTTATGGCACTTTGGCTTCAT
TTCACCCCTGAGTGGTACCTGGAGCATGTACCTTCGGGTGCATTGATTCT
CGTTCAAAGGTTGATATGGCCCTCCTATGGGCCGCATCTCCATTCCTCAT
TGAGATACGCGTCACTTAAATGGCATGGCATTACTTTTCAGCGAGATGCA
TGGAGTAAAACGCAGGTAAACTTTTATCGATATGAAAAAATCGTAACCGA
AACATGTAATCTAAGTCGTATCTGCGCTAGTAAGTGACGTTTCTATGCGT
AGATACCTCCTTTGCACAGATTTATGCATTATGTTATGGTGGCTATTCTC
TAGTGTGTGCATCACATATATCGCTCGCCCTGCCGCCAAAACGCTCTATC
ACGTTTCTATATATGTCTAAAGTTATCAATAAATGATGGCAACATATTTT
TCGTACAAGCTTTCTTCACCGAGATACTGGGGGGTACCTTGAAACATAGC
TCTTGCCTAATTGCACCATACTGAAATTGACCATTGGGAACCCAAGGTGA
GAAACTTAGTCTTTACTCTATTATTATTTTCCCCAAGGTTGAAAACTGAC
CAATAGGCTTTCAGGAGCTGATATCAGAGTAGGAGGCGTACTGGAGTACA
GTGTATTCATGGGAGAAGACCAGATGTATAGGAGAATAATCATCAACGGC
ACACCCAGGGTGATGAGTGGCGAGACTGGAAGTACTATGTGTTGATATAT
ATCAGAGTCACAAGGTCCAAGGTGTGTGACTGGCAAGAGGCTGGTGAGCT
GGCAAAGCTGGTAGTTGGCATTGATCAATGGTTGAACTTGTATCGTTTGA
GAATAATAACCTTTTCAGACTGTATGTTTTCGGCTATAAGCACTGATGGA
TAATCATACAATTTATCATTACTTCCCATTGAGATGGAGCATGGTATAAT
CCAGCGAAATTTTTAATGATTGAATATTCCGGGTGGTTTGGTGACCCTCT
TTCAACAAAGTACCAAGCCTTAGGGTTACTCGGTACCTCCTCAATGGGAA
GTAATGATATATAATAATGACCTTTATATTTGAGTGAGAAAAGCCATTAT
ACATATCCTTGTCTTGCACATCAATAATATTCCTTGGCACTGTTGCCAAC
ATGCAAATCAGGCATTATCATATTCCAGAAGTCATGTAAGGGGAGGAGTA
GGCAATGCCTGAACCATCTCTCCTCCTCTCCCTTACAGAGATGTTGTCAT
AGAGGAGCCAGAAGTCATAGAAGAGCCAGAAGTCATATACAAGGGGAGGA
GTAGGCAATGCCTGAACCATCTCTCCTTCTTTCCCTTACAGAGATGTTGG
TGGTGAGCAGGGAGGCATAGATGCCACTGAGTCTTCGCTCGTTGGTGTTG
TAGAATCTTGGTGAACCCAGAGCTGAAGGAGTATTGTCATCATTGAAGGA
GCTTTGGGTGGGTGAGGTTAACAGCAACCCAGGTCGGAAATCCATTGTTA
GAGACTGCTGCTGGTAACAGCAGAAGAGCCAGGGTCGGCAGTGTACTAAG
CAGGGCCAGGGTACTGGGCATCATCAAAGTAGTCATCATGCGAACCGTGC
ATGGTAGGTAGTAACTGAGCAGGAGAAGACAGGTTCCCAGGAAGCATCAG
AGTAATGCCACAGGCGTCGTGGCCGCGGTGTGGAGGTGCACGGGCTCAAA
GGGCTGGGCAGCAGGATCCATAGAAGTCGAGTCATTCTCTTACTACTCCC
TCTTTTGGAAGAAGCAGAAGATGTCAAGAGCGGCGCCGGAGGCATCTGGG
TTGGCGTAGGTAGCATAGGCATCAATATAGGTGCCGGCCGCGCGGGCTGA
ACTGGGGTGCCGCAGCATTCAGGATATAGTCGCGGGCCGTGGAGGCGCAG
GCGCGTGCGGGGGCTGTCCAGTGTCAGTGGTGCCAGTGTTGGCAGATGCA
GAGTCGTAGGCGGCGGCGGGTGTGCACGGAGCGCGGGCCAATCCAGGAGT
GGTGGCAAAGGAGTACACATGGTGCTGGGCACACTGATAAGAATGGCCAC
CAGTGCTGCATCATCAGGTGGTAAAGGTGGTGGCACCGGCATCGGGGCCG
CAGTGCTCAGGATCTTGACAGAAGAAGTAGCCATATAAATTTCAGGTGGC
ATAGGTGGTGGAGGCATTAATATCACCAGCTGCATGTGGCCTCACATCCA
GGGTGGCATGGTCCATAAGAAAGAACTTGTTGTTGATGCTTTTGTCAGGT
GGCACAACACTCTCCCGATACTCATTGACACTAAGTATCAACAACAACTT
CTTGCTTATGGACCATTCCACCCTGGATGTGAGGCCACCTTCAGCTGATG
ATATTCCAGTGCCTCCACCATTTATGCCACCTGAAATTTATACGGCTACT
TCTTCTGTCAAAATCCTAAGCACTGCGCCCCCGATGCCGGCGCCCCCACC
TTTACCACCTGATGATGCAGCACTGGCGGCCATTCCTATCAGTGTGCCCA
GCACCATGTGAACTCCTTTGCCACCACCTCCTGGATTGGCCCAAGGCCAG
GCATACCCGCTGTCCGCATGACCAAGACCTGCCAACACTGGCACCACTGA
CACTGACAGCCCCGCGGGCGCGGCGCGCTCCACGGCCCGCGACTATCCTG
AATGCCGTGGCACCCCAGTTCAGCCCGGGCCGGGCACCTACATTGATGCC
TAAATGCTACCCACGCCTAACCCAGATGCCTCCGGCGCCATTCTTGACAT
CTTCTGCTTCTTCCAAAAGAGGGAGTAGTAAGAGAATGACTCGACTTCTA
TAGATCCTGCGGCCCAGCCCTTTGAGCCCTGCACCTCCACGCTATGCCAC
GATGCCTGTGGCATTTACTCTCATGGTTCCTGGGAACCTGTCTCCTACAA
CTAAGTTATACCTACCATGCACGGCCCGCATGATGACTACTATGATGATG
CCCAGTACCCTGGCCCTGCTTATTACACTGACGACCCTGGCTCTTCTGCT
GCTACCAGCAGCAGCTCTAATAATGGATTTCCGACCTAGGATGTCGTTAA
TCTCACCCACCCAAAGCTCCTTCAATGATGACAGTACTCCTTCAGCTCTG
GGTTCACCAAGATTCTACAACACCAACGAGCAATGACTCAGTGGCATCTA
TATTATGCTTCCCTGCTCACCACCAACATCTCTGTTAGGGAAAGAAGGAG
AGATGGTTCAGGCATTGCCTACTCCTCCCCTACTATGCCTATTGATCAGT
TTTCAACCTTTCGCAAATAATAATTATGACTCAGTCTTCTCATCTCGGGT
TCCGAATGGTCAATATCAGTACAAAACCAGCAGAATTAGCAAAAACAGCA
CTTTTCCAGCATTTTTTAACCTTCACAGTGACAACAAAAAGTAGCAGTTT
CCCTTCTAAAAACTCAGTAAAAGTAGCATTTCAAGTCCAAAATGACAAAA
AAACCTCTTTGCGCACTGAAAAATCAAAAACAGCCCATTCTCTTCAAACT
TCAATGTTCAACTCCAACTTAATATTCAGATTCATTTTCAGATTTAACTT
ACATGAGCTTCATAATGTCAAAGTCAGCAAATATATATGTCAGCTCTCAG
CACTCCATTTTCAGTATGCATTATATTGCAGTATAGGGATTTCAAGAGGA
AGGCATTAGCCCAGTCTGTATAATCTGTACACTTCGTCCTCCTTTCCCTG
CTGCGCGTTGCCCCTATATTCAAAAACATTGCTGCAAATCAAGTCACAGG
CACAAAAGGATATTTTTTTTAAGAAGGTAGTTTATATATACAGTCAATCG
GTCAACTCTGTACTCTCATGGCTGGTTCTTGTTTTGTATCTTGATGGTGA
GTCTGTCAAGCTTTCATTCCCACACTGTTGAAATCAGTTGGACTACGTAA
AACAAAAACACAAAAAATGAAAACCCTCTTGCGCCGTCTCTTTTTCCCAA
CGCCGCCCCCGCCTCCCCCGGTCGCTCCTCGCGCGGCAGACCGGGCCATC
TGGGAGCTGGGCGCGGTGAATGTGGTGCTCTCCTGCATGGAGATGCTGTT
CTACATGCGCGGGTTCACCTACACGGGCTTCCTCGTGCGCATGGTTGTGC
AGGTGTTCAGCGACCTGAAGCCCTTCATGATGGTGGTGGTGGTCATCATC
AGCGCCTTCGCCGGCAGCTTCTACACCATGAACACGGGCGACACCTACAC
AGGGTGGGTGAGTGCGCCTGGCCCCCCTCCCCTGCCCCCCCCTGGCGTCG
GCGGCGTCCCCTGGAGGGAGGGCCACCTGCGTCGTGTTATACACAACAAC
CGGCGGCCCTATCTCTTCCTTGCTGTGTACTACTAGATATCCCCCCACAC
ACACTTGGCTCCCTGGCCGTAGCTGCCTTGAGAGGTACGGTGCAGCATTT
GAACCTGAAACAGTTGTGCCTTTCCCAGTTTGAAGGTGAACTATAATGAA
ATCTGTGCGCGATTATCATCAGCGTGTCATGACCCACCCAGCTTGGTCCA
ATTTGAACCCCCTCTGCCCCTAAATTACGCTATGAACTGTTTACTGCTCA
GTGGTATGTATGAACATAATATATACACTATACCATCCTACAACTTGAAA
TATGTATACTAGATTCAGCAGCAACTGTGCCGCGGTCAGTAAGTTGGGAC
TCACGGTAGGCAGAACGTGCGAGCCTCTGTCTCCTTGGAGAGCAAATCAT
CAGGCAGGGACCGCCCGCCCTTCTTTGCCCCCCCCCAACACCAGGTACGA
CGGCTACGCGGGGTACATCGTGTGGACCTTCCTGCTGATGAACCAGATCG
TGTGGGACAGCAACTTCTGGGAGGACTCCGTCTCGCCCGTGCTGAACCAC
GTGCTGGTCTGCCTGTTCCTCTTCGTCACGGCCATCATCATGCTCAACTT
CATCATCGCCATCCTGGGGGACACCTACAGCTCCGTCTCCCAGAACGCCC
GGGTGGGTAGGTGGCCCGGGTCTTCCCTCTTCCTGTAAGAAGAAGAAGAA
GAAGAAGAGCCTTGATGGGGGGGTTGTTGCTGGCGGCGGGAGTGTTGATC
TAGGTATGTGATGCAATTGAAAGACAATGGAAGGTGCGGTTGAGTTTTGT
GAGTTCGTTGGGGAAGGGGGAGACCAACAAAAGCCGGCAACCCATCCTTC
CTCCCATCTTTATTACCGTCCCGAACTGTGTTCTACAACAAGTCCTATAT
GTGGTACGTGCGATGCAGCTGCACTTCTTCTGTGGATTTGAGAATTCCCT
GTGTTTGTTGCGGGATGAATATCATCGATTTCACACTCTCCTTAAACGCC
GGTTGCTTTCTTCTTCACTGATGTGATGATCGCGTTGCATTTCTGTAAAA
GTATACCCACCTGGGCATGGAGGCCCCTCCCTGGCCTCAAAACCCTGCAT
CAGCCTGCGCGCCCACACACCCTTCCGCCGCCGCCGCCCCCCCCCCCCCA
GTCCGAGGGCATGCGCGaGCGGGCGAACATCATGCTCGAGCTGAACTTCT
ACCTGACCGCCAAGGAGCGCGAGAAGGTGGAGCAGAAGTTCCGGTGGATC
CACGTGATGACGCCCTGGGACATCGACAGCAGCAGCGCCGCCCAGGACAG
GGGGCGAGGGCGGCGCCGAGGTCCAGCGGTGGCTGTGCTGGAGAACAAGG
TGGGGCGCGCGCGGACTCCAGGCTGTCTGCTCTATCATCTCACTAAATCG
ATCAGAACACACACATTATAGTTCCAGGGAGGAATAATAAACTTAGAGCC
TATATTCAAAAACAATTTTGGAAAATAATCCCAAGGGATTAAGTTCGTAA
TAAACAGAAGCCGTGCGAGCCTTTTCGGCTTAAAATGCACCATGGGGGTA
AAAGGCACTCGCCGACTGGACTGCTACATAGGTTACTGGCAGCGGTGCCA
GAATCTAGAATACAAACATATTGTTACGTAGTCTTCCACCGCGACAAGTT
GTTGTAGAGAAATACTTGCATTGTTGTTGTACGTCAGCTTACAAGACATC
ATCAAGTCATTAGGTTTTGTTCACTTTGTAAAAGCGTGCGGGTTGCTTCT
AACAAACCAACTGATCGAGAATCCACTTGACACAAAGAACTATCATGCCC
CCAAAAAACTCTTTGATTTGGTGCAAGCATACCATCGCATACATAGACAA
AAATAGGTATATTGGTCCTTACCGTCGTCTCTGCTATCGTAGTGCTTCCG
AAAAGGAATTCATAAGAACGTTCCTTACCCCCCACCCCATGGCCTTAAAC
CACCTTAATCTATTAGTGTGTATGTATGTTGTAGTACACATATACACTGA
CTATAATATTGTACCGAGAGATGTTTCCTTGTCAACTTTTTTTTTTTAGT
GCCATTACAGCATTTTAACTAACTATATAGTTAAACAAAAAAAAAAAACT
ACAAGTTATGTAAGTAATAACAACAATTCCCGGATTACGCATGAATTCAT
TTACCGCACAAACTCCCAGTTGTTGGGAGTCCCAGTTGGGATAACCTCCC
AGTTGGATTCCCATCCGGGAGAAGTTAAAAGAAGGTTCTTTCGTGCGTTT
TTTGTACGATGAAAAGAAAAAACCCTTAACTACATTTTCATTTCATTTCC
ATTATTATATATAGCCAGCGTCATTTTATCCACAAATGAGGTGGCGGTGA
TGATCCATGCACAGCTGCGAGAAAGAATCATGCTCCTTTTTTCGTTTCGT
CGGTGCTGCTCTGGTGGTGGCGGCGGCGGCGGCAACAAACAACTCGTGAC
CGAGAAATGCGCACCGACTTTCACAAAGACTGCGTACTTTCATTTTCTGT
TGGCACCAATATAACGGAAATTTATGATATTTTGTGTGGTTGTCATCTTT
CAAAGAACAACTATCCGTTTTAAGAACTTTATTTTAAATATTTCAAGAGT
GAATCATGAAATTCTCACAACTCTTACCACGTTTAACGCAGCATTTTCCC
CTTAAGCTGAAACTGCCGTAGAAAAATCTTCAGTTTGATCCTCATTGAGT
ATATTTGTTTTTGTGACAAACCCATTCCAACAAAATGAAATGAAATGAAG
AGAAGAAGCAACCAAACCACAGCAGAAAGATGCAGAAAGAAGCGAGCTCT
GCTGCTCTGCTGAGTAGAGCTGAGACTGCTGCTGCTGCTGCTGCAGCAAG
CGAAGCCAGCCAGCCGCCAGAAGAAGAAGAAGCCCCTCGTCGTCCTCGTC
GAACGAAAGCCAGCAAGTTAGGGTTTATTATGTATTCAATATAGCCATCA
TATTTTCTTGTTGATGATAAGTAATGTTTTCATCCATGTTCAAATTCTTT
TTGTTGAGAATCAAGTTTTTTGTCGTTTAATTAAGCGGAAGATACTTTTT
CTAGATAATATTTTAGGCATACGCATTTTATTTGAAATCTTGAATAGAAC
ATTCTCTTTACGAATAGTTGTTCTACATAACGAGTTCACAACCACATAAA
ATATGCTATATTTCCGTTTTTATCACTGTTCGAAAAATGAAACGACACTA
CGTCATCATGATTGATACGCAGCAGCAGCCGCAAAAAAAAAAACAAGAGG
CTCTTCGTCGTTGTTACACCATCATACAGCTGCTCAGCTATATCGAACGA
AAGGTCATGATTGTTTCTCAATGTATACTGCTGATGGATATCATCACTAT
ACCACCCCCTCGACTCCACATGCGAAGTACGTATAGCTATAGCAAACACA
GTACATGCCAAATGACGACTGAGTGCGTACACCGACACTATATCATCATA
CGGGAAACGAGCTGCCCTCGAAGAATATCCCAACTGGGAGGATATTCCCA
ACCGGGGCTCCCAACTGGGAGTTTGTGCGGTAAATGAATTTATGCGCAAT
CCGGAAATCGTTGTTACCATTTTTGAGAGTGTTGAAAAGAAGAAGAAGAA
CATTGTTGATGTATACAATACACATTTGCATTTTATACATTTCAAAATTG
CACAGACAGTTGGGTATGCCATAGTAATGGAAAATTAAAACAAAAATAAA
GTGCTGCAAGTAAAGACAAAAACGTTGCCGTCCTCTTTGCCCCCCCGTAC
TGCTCCCCCCCCCCCGCCCCCCCCACCGCCGCCGTCCCTTCCTTCCCCCC
CTCCCCAGGTGCGCATCCTGGAGGGGCGCATCGCGGCGCAGGCGGCCGAG
ATCCGGGAGTCCAACGAGCTGCTGGCCAAGTTCTACGCCGACTTCGAGGC
CGAGGAGCT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1158:165544..174902+

>mRNA_H-akashiwo_Contig1158.8.1 ID=mRNA_H-akashiwo_Contig1158.8.1|Name=mRNA_H-akashiwo_Contig1158.8.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=867bp|location=Sequence derived from alignment at H-akashiwo_Contig1158:165544..174902+ (Heterosigma akashiwo CCMP452)
TTGGATGTTTTCCTTCTGATACTGGGAGGTTACAACATTCTGTACGAGGT
GTACCAGGCCACGACGGACTTCTCCCCTGACTTCTGGAACCTGCTGGATT
GGACCTACTACGTGCTGCTGGTGGTGAACTCAGTGTTCTCCCTGCTGGAC
CGGGCCATCTGGGAGCTGGGCGCGGTGAATGTGGTGCTCTCCTGCATGGA
GATGCTGTTCTACATGCGCGGGTTCACCTACACGGGCTTCCTCGTGCGCA
TGGTTGTGCAGGTGTTCAGCGACCTGAAGCCCTTCATGATGGTGGTGGTG
GTCATCATCAGCGCCTTCGCCGGCAGCTTCTACACCATGAACACGGGCGA
CACCTACACAGGGTACGACGGCTACGCGGGGTACATCGTGTGGACCTTCC
TGCTGATGAACCAGATCGTGTGGGACAGCAACTTCTGGGAGGACTCCGTC
TCGCCCGTGCTGAACCACGTGCTGGTCTGCCTGTTCCTCTTCGTCACGGC
CATCATCATGCTCAACTTCATCATCGCCATCCTGGGGGACACCTACAGCT
CCGTCTCCCAGAACGCCCGGTCCGAGGGCATGCGCGaGCGGGCGAACATC
ATGCTCGAGCTGAACTTCTACCTGACCGCCAAGGAGCGCGAGAAGGTGGA
GCAGAAGTTCCGGTGGATCCACGTGATGACGCCCTGGGACATCGACAGCA
GCAGCGCCGCCCAGGACAGGGGGCGAGGGCGGCGCCGAGGTCCAGCGGTG
GCTGTGCTGGAGAACAAGGTGCGCATCCTGGAGGGGCGCATCGCGGCGCA
GGCGGCCGAGATCCGGGAGTCCAACGAGCTGCTGGCCAAGTTCTACGCCG
ACTTCGAGGCCGAGGAG
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