mRNA_H-akashiwo_Contig1157.7.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1157.7.1 vs. uniprot
Match: A0A7S3Y8J9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8J9_HETAK) HSP 1 Score: 145 bits (366), Expect = 4.170e-41 Identity = 73/114 (64.04%), Postives = 93/114 (81.58%), Query Frame = 1
Query: 1 KLFQSYLSGRSLFVVATNGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEALCLFYADDLTLMMEIHKGEEG---EAAHKLDEDLERLHNWGDQWLLEFEPSKSQSLLV 333
KL QSYLS R+LFVVA NG++S + I SGVPQGAIWSPLLF+LF+RNVP V+EALCLFYADDLTL ++ + EEG AA +L++DL+RL+ +G +WLLEFEP+KSQ L++
Sbjct: 39 KLMQSYLSDRALFVVA-NGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDR-EEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELII 150
BLAST of mRNA_H-akashiwo_Contig1157.7.1 vs. uniprot
Match: A0A7S3Y8U8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8U8_HETAK) HSP 1 Score: 145 bits (366), Expect = 7.040e-40 Identity = 73/114 (64.04%), Postives = 93/114 (81.58%), Query Frame = 1
Query: 1 KLFQSYLSGRSLFVVATNGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEALCLFYADDLTLMMEIHKGEEG---EAAHKLDEDLERLHNWGDQWLLEFEPSKSQSLLV 333
KL QSYLS R+LFVVA NG++S + I SGVPQGAIWSPLLF+LF+RNVP V+EALCLFYADDLTL ++ + EEG AA +L++DL+RL+ +G +WLLEFEP+KSQ L++
Sbjct: 32 KLMQSYLSDRALFVVA-NGDSSSHMSIKSGVPQGAIWSPLLFDLFIRNVPQRVREALCLFYADDLTLQKDVDR-EEGAAQRAAEELNDDLQRLYEFGKEWLLEFEPTKSQELII 143
BLAST of mRNA_H-akashiwo_Contig1157.7.1 vs. uniprot
Match: A0A7S3Y8N4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8N4_HETAK) HSP 1 Score: 137 bits (346), Expect = 1.800e-35 Identity = 71/113 (62.83%), Postives = 89/113 (78.76%), Query Frame = 1
Query: 1 KLFQSYLSGRSLFVVATNGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEALCLFYADDLTLMMEIHKGEEG--EAAHKLDEDLERLHNWGDQWLLEFEPSKSQSLLV 333
+LF+SYLS R+LFVVA NG+ S+RV I SGVPQGAIWSPLLF+LFVRNVP V+EALCLFYADDLTL+ I + + +A +L++DLERL +G +WLLEFE +KS L +
Sbjct: 484 QLFESYLSDRALFVVA-NGQISERVSIKSGVPQGAIWSPLLFDLFVRNVPQRVREALCLFYADDLTLLKVIDRNNKAAQDAQLELNQDLERLFRFGKEWLLEFEATKSFGLTI 595
BLAST of mRNA_H-akashiwo_Contig1157.7.1 vs. uniprot
Match: A0A210QQ08_MIZYE (RNA-directed DNA polymerase from transposon BS n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QQ08_MIZYE) HSP 1 Score: 79.7 bits (195), Expect = 4.220e-15 Identity = 41/109 (37.61%), Postives = 70/109 (64.22%), Query Frame = 1
Query: 7 FQSYLSGRSLFVVATNGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEALCLFYADDLTLMMEIHKGEEGEAAHKLDEDLERLHNWGDQWLLEFEPSKSQSLLV 333
F++YLS R VV NG+ S+ + + +GVPQG+I PLLF +++ ++ +++ + LF ADD +L + + +A L+ DL + HNW +WL+ F PSK+++LL+
Sbjct: 89 FENYLSDRKQRVVI-NGKNSNWLNVKAGVPQGSILGPLLFLIYINDIVKDIQAKIKLF-ADDTSLYVTVDIPR--VSADILNSDLNKFHNWSQRWLVNFNPSKTETLLI 193
BLAST of mRNA_H-akashiwo_Contig1157.7.1 vs. uniprot
Match: A0A1W7R6F6_AEDAL (Putative reverse transcriptase (Fragment) n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6F6_AEDAL) HSP 1 Score: 79.3 bits (194), Expect = 6.120e-15 Identity = 44/112 (39.29%), Postives = 71/112 (63.39%), Query Frame = 1
Query: 1 KLFQSYLSGRSLFVVATNGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEALCLFYADDLTLMM-EIHKGEEGEAAHKLDEDLERLHNWGDQWLLEFEPSKSQSLLV 333
+L +SYL GR+ V+ NGE S QI SGVPQG+I PLLF+LF+ ++P+ ++ +ADD+ + + K E A K++ DL RL++W + LL P+K++++L+
Sbjct: 620 ELIKSYLIGRTQTVLH-NGEFSSFAQIESGVPQGSILGPLLFSLFINDLPSVLEYCSVHLFADDVQIYLCSDRKYNITEMARKINSDLRRLNDWSKRNLLIINPTKTKAMLI 730
BLAST of mRNA_H-akashiwo_Contig1157.7.1 vs. uniprot
Match: A0A7D9DPI3_PARCT (Reverse transcriptase domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPI3_PARCT) HSP 1 Score: 79.0 bits (193), Expect = 7.050e-15 Identity = 43/111 (38.74%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 1 KLFQSYLSGRSLFVVATNGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEALCLFYADDLTLMMEIHKGEEGEAAHKLDEDLERLHNWGDQWLLEFEPSKSQSLLV 333
+ F+S+++ RS VV G+ S QI SGVPQG ++ PLLF L+V ++P +K + LF ADD L + E G+ +L EDL++L W ++W + F PSK +++ +
Sbjct: 139 RCFESFITNRSQTVVC-EGKHSHPTQITSGVPQGTVFGPLLFLLYVNDLPDNLKSQIRLF-ADDALLYGVMSNEENGD---QLQEDLQQLEEWQNKWQMSFNPSKCKTICI 244
BLAST of mRNA_H-akashiwo_Contig1157.7.1 vs. uniprot
Match: UPI001E1D5879 (uncharacterized protein LOC123565453 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5879) HSP 1 Score: 78.2 bits (191), Expect = 1.500e-14 Identity = 43/111 (38.74%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 1 KLFQSYLSGRSLFVVATNGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEALCLFYADDLTLMMEIHKGEEGEAAHKLDEDLERLHNWGDQWLLEFEPSKSQSLLV 333
+LF+ YLS RS VV G +SD V I++GVP G+I PLLF +F+ ++ ++ + LF ADD +L + + AA L+ DL ++ NW + WL++F K+++LL+
Sbjct: 306 ELFRDYLSNRSQKVVLPGG-SSDTVAISAGVPHGSILGPLLFIVFINDIVKDINSTIKLF-ADDTSLYIIVDNP--AAAADILNSDLLKITNWANDWLVDFNTRKTETLLI 412
BLAST of mRNA_H-akashiwo_Contig1157.7.1 vs. uniprot
Match: A0A7D9ITU5_PARCT (Reverse transcriptase domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ITU5_PARCT) HSP 1 Score: 77.0 bits (188), Expect = 1.850e-14 Identity = 39/111 (35.14%), Postives = 62/111 (55.86%), Query Frame = 1
Query: 1 KLFQSYLSGRSLFVVATNGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEALCLFYADDLTLMMEIHKGEEGEAAHKLDEDLERLHNWGDQWLLEFEPSKSQSLLV 333
K F SYL+GRS FV +G+ S R+ +N GVPQG++ P+LF L+V ++P + + +ADD TL H + H ++ DL L+ W Q + K++ +L+
Sbjct: 131 KWFTSYLTGRSQFVTI-DGQQSSRLPVNHGVPQGSVLGPILFLLYVNDIPLHLSHSSVDIFADDTTLSASTHWNDIPSMVHDINCDLAALNQWSIQNKMSINDEKTKFMLI 240
BLAST of mRNA_H-akashiwo_Contig1157.7.1 vs. uniprot
Match: UPI001E1DFDAE (uncharacterized protein LOC123533210 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFDAE) HSP 1 Score: 77.8 bits (190), Expect = 2.130e-14 Identity = 42/109 (38.53%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 7 FQSYLSGRSLFVVATNGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEALCLFYADDLTLMMEIHKGEEGEAAHKLDEDLERLHNWGDQWLLEFEPSKSQSLLV 333
F++YLS R VV G S+ + +GVPQG+I PLLF +F+ ++ E++ + LF ADD +L + + + + AA L D++ + +W D+WL+ F PSKS+++LV
Sbjct: 618 FENYLSNRRQRVVLP-GVKSNWAYVKAGVPQGSILGPLLFLIFINDIVDEIRSCVNLF-ADDTSLYVIVEQPD--TAAGLLQSDIQTISSWADKWLVTFNPSKSETVLV 722
BLAST of mRNA_H-akashiwo_Contig1157.7.1 vs. uniprot
Match: UPI0006D4C83C (uncharacterized protein LOC106693135 n=1 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0006D4C83C) HSP 1 Score: 77.4 bits (189), Expect = 2.870e-14 Identity = 36/110 (32.73%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 1 KLFQSYLSGRSLFVVATNGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPAEVKEALCLFYADDLTLMMEIHKGEEGEAAHKLDEDLERLHNWGDQWLLEFEPSKSQSLL 330
K F YL RS V A+N + + +SGVPQG+++ PLLF++F+ ++P ++ L L YADDL + + + + H+++ED++R+ +W L+ SK+++++
Sbjct: 469 KWFHFYLCNRSQSVTASNNIRLEWIPTSSGVPQGSVFGPLLFSIFINDLPKCLRYCLHLLYADDLVIYLRCKPLDIADGVHRMNEDIQRIADWSVFNKLKINKSKTKAMI 578 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1157.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1157.7.1 >prot_H-akashiwo_Contig1157.7.1 ID=prot_H-akashiwo_Contig1157.7.1|Name=mRNA_H-akashiwo_Contig1157.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=112bp KLFQSYLSGRSLFVVATNGEASDRVQINSGVPQGAIWSPLLFNLFVRNVPback to top mRNA from alignment at H-akashiwo_Contig1157:271737..272072- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1157.7.1 ID=mRNA_H-akashiwo_Contig1157.7.1|Name=mRNA_H-akashiwo_Contig1157.7.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=336bp|location=Sequence derived from alignment at H-akashiwo_Contig1157:271737..272072- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1157:271737..272072- >mRNA_H-akashiwo_Contig1157.7.1 ID=mRNA_H-akashiwo_Contig1157.7.1|Name=mRNA_H-akashiwo_Contig1157.7.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=336bp|location=Sequence derived from alignment at H-akashiwo_Contig1157:271737..272072- (Heterosigma akashiwo CCMP452)back to top |