mRNA_H-akashiwo_Contig1156.4.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1156.4.1 vs. uniprot
Match: A0A7S4DCW1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCW1_HETAK) HSP 1 Score: 116 bits (290), Expect = 3.170e-29 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 2
Query: 2 PRGTLLAIALSTFVYALMAWLLGCTIDRETLKDYEDSIAVVTISGWGPVVYAGIFA 169
PRGTLLAIALSTFVYALMAWLLGCTIDRETLKDYEDSIAVVTISGWGPVVYAGIFA
Sbjct: 127 PRGTLLAIALSTFVYALMAWLLGCTIDRETLKDYEDSIAVVTISGWGPVVYAGIFA 182
BLAST of mRNA_H-akashiwo_Contig1156.4.1 vs. uniprot
Match: A0A5B8XBR2_9BILA (Solute carrier transporter 12 (Fragment) n=1 Tax=Meara stichopi TaxID=84115 RepID=A0A5B8XBR2_9BILA) HSP 1 Score: 55.1 bits (131), Expect = 2.280e-7 Identity = 30/84 (35.71%), Postives = 43/84 (51.19%), Query Frame = 2
Query: 2 PRGTLLAIALSTFVYALMAWLLGCTIDRETLKDYEDSIAVV----------------------------TISGWGPVVYAGIFA 169
P+GTLLAI +ST +Y +MAW+ GCT+ RE + + +S V+ TIS +GP++ AGIFA
Sbjct: 409 PKGTLLAILISTIIYVIMAWIAGCTVAREVVVAFVNSSLVLDAAPSAGPVCLNPEGCSYGLVHDTSVAETISAFGPLIVAGIFA 492
BLAST of mRNA_H-akashiwo_Contig1156.4.1 vs. uniprot
Match: UPI00077A4C26 (solute carrier family 12 member 2-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A4C26) HSP 1 Score: 54.7 bits (130), Expect = 3.100e-7 Identity = 28/80 (35.00%), Postives = 41/80 (51.25%), Query Frame = 2
Query: 2 PRGTLLAIALSTFVYALMAWLLGCTIDRETLKDYEDSI------------------------AVVTISGWGPVVYAGIFA 169
P+GTLLAI +ST VY ++AW +G ++RE L +++ + +SGWGP+V AGIFA
Sbjct: 304 PKGTLLAILISTLVYVMLAWFVGACVEREALGLVHNAVNATNGSLASCVSQECQYGLLNDFQVMEAVSGWGPIVTAGIFA 383
BLAST of mRNA_H-akashiwo_Contig1156.4.1 vs. uniprot
Match: UPI001CF1ECDB (solute carrier family 12 member 2-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF1ECDB) HSP 1 Score: 54.7 bits (130), Expect = 3.110e-7 Identity = 28/80 (35.00%), Postives = 41/80 (51.25%), Query Frame = 2
Query: 2 PRGTLLAIALSTFVYALMAWLLGCTIDRETLKDYEDSI------------------------AVVTISGWGPVVYAGIFA 169
P+GTLLAI +ST VY ++AW +G ++RE L +++ + +SGWGP+V AGIFA
Sbjct: 386 PKGTLLAILISTLVYVMLAWFVGACVEREALGLVHNAVNATNGSLASCVSQECQYGLLNDFQVMEAVSGWGPIVTAGIFA 465
BLAST of mRNA_H-akashiwo_Contig1156.4.1 vs. uniprot
Match: A0A3M6UAT8_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UAT8_POCDA) HSP 1 Score: 54.3 bits (129), Expect = 4.220e-7 Identity = 29/78 (37.18%), Postives = 41/78 (52.56%), Query Frame = 2
Query: 2 PRGTLLAIALSTFVYALMAWLLGCTIDRETLKDYEDSIAVVT----------------------ISGWGPVVYAGIFA 169
P+GTLLAI +ST VY ++AW +G ++RE L ++ + T +SGWGP+V AGIFA
Sbjct: 410 PKGTLLAILISTIVYVMLAWFVGGCVEREALGFVQEVLQNKTLASCVEQECRYGLLNDFQVMEEVSGWGPIVTAGIFA 487
BLAST of mRNA_H-akashiwo_Contig1156.4.1 vs. uniprot
Match: A0A2B4SPH4_STYPI (Solute carrier family 12 member 2 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SPH4_STYPI) HSP 1 Score: 53.5 bits (127), Expect = 7.960e-7 Identity = 29/81 (35.80%), Postives = 41/81 (50.62%), Query Frame = 2
Query: 2 PRGTLLAIALSTFVYALMAWLLGCTIDRETLKDYEDSIAVVT-------------------------ISGWGPVVYAGIFA 169
P+GTLLAI +ST VY ++AW +G ++RE L ++ + T +SGWGP+V AGIFA
Sbjct: 386 PKGTLLAILISTLVYIMLAWFVGGCVEREALGFVQEVLQNTTNETLASCLEQECKYGLLNNFQVMEEVSGWGPIVTAGIFA 466
BLAST of mRNA_H-akashiwo_Contig1156.4.1 vs. uniprot
Match: UPI001CF53A8A (solute carrier family 12 member 2-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF53A8A) HSP 1 Score: 52.8 bits (125), Expect = 1.490e-6 Identity = 27/80 (33.75%), Postives = 40/80 (50.00%), Query Frame = 2
Query: 2 PRGTLLAIALSTFVYALMAWLLGCTIDRETLKDYEDSI------------------------AVVTISGWGPVVYAGIFA 169
P+GTLLA+ +ST VY ++A+ LG ++RE L D++ + +SGWGP+V AGI A
Sbjct: 389 PKGTLLAVLISTLVYVMLAFFLGACVEREALGLVHDAVNATNGSITSCVSQECQYGLLHDFQVIAAVSGWGPIVTAGILA 468
BLAST of mRNA_H-akashiwo_Contig1156.4.1 vs. uniprot
Match: T1EMA0_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EMA0_HELRO) HSP 1 Score: 52.4 bits (124), Expect = 2.030e-6 Identity = 26/58 (44.83%), Postives = 39/58 (67.24%), Query Frame = 2
Query: 2 PRGTLLAIALSTFVYALMAWLLGCTIDRETLKDYEDSIAVVT--ISGWGPVVYAGIFA 169
P+GTLLAI ++T +Y L+AW+ G + R+ +D I+ VT IS +GP+ AGIF+
Sbjct: 240 PKGTLLAIIITTIIYLLIAWITGLCVKRDANGIIKDMISSVTQLISIFGPITVAGIFS 297
BLAST of mRNA_H-akashiwo_Contig1156.4.1 vs. uniprot
Match: A0A0L0DG96_THETB (Na-K-2Cl cotransporter 1 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DG96_THETB) HSP 1 Score: 52.0 bits (123), Expect = 2.780e-6 Identity = 27/56 (48.21%), Postives = 37/56 (66.07%), Query Frame = 2
Query: 2 PRGTLLAIALSTFVYALMAWLLGCTIDRETLKDYEDSIAVVTISGWGPVVYAGIFA 169
P+GTLLAI +ST VY M W++ RE LK +++ ++ IS GPV+ AGIFA
Sbjct: 284 PKGTLLAIGISTVVYIGMVWIIAAVSTREKLK--TNTLIMMDISVAGPVIVAGIFA 337 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1156.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1156.4.1 >prot_H-akashiwo_Contig1156.4.1 ID=prot_H-akashiwo_Contig1156.4.1|Name=mRNA_H-akashiwo_Contig1156.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=57bp PSWHAVGDSSFYFCIRAHGLAAWVHHRPGDAEGLRGQHRGGDHLRVGARGback to top mRNA from alignment at H-akashiwo_Contig1156:49471..50363- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1156.4.1 ID=mRNA_H-akashiwo_Contig1156.4.1|Name=mRNA_H-akashiwo_Contig1156.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=893bp|location=Sequence derived from alignment at H-akashiwo_Contig1156:49471..50363- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1156:49471..50363- >mRNA_H-akashiwo_Contig1156.4.1 ID=mRNA_H-akashiwo_Contig1156.4.1|Name=mRNA_H-akashiwo_Contig1156.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=171bp|location=Sequence derived from alignment at H-akashiwo_Contig1156:49471..50363- (Heterosigma akashiwo CCMP452)back to top |