mRNA_H-akashiwo_Contig1156.2.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1156.2.1 vs. uniprot
Match: A0A7S4DCW1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCW1_HETAK) HSP 1 Score: 113 bits (283), Expect = 3.510e-28 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 2
Query: 2 GSAGQAWRYLAAVQHLLKLEQTKSHVKTFRPQYLVLCGQPEGRDHLIQFVTQL 160
GSAGQAWRYLAAVQHLLKLEQTKSHVKTFRPQYLVLCGQPEGRDHLIQFVTQL
Sbjct: 332 GSAGQAWRYLAAVQHLLKLEQTKSHVKTFRPQYLVLCGQPEGRDHLIQFVTQL 384
BLAST of mRNA_H-akashiwo_Contig1156.2.1 vs. uniprot
Match: A0A7S2XWB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWB7_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 3.570e-16 Identity = 34/53 (64.15%), Postives = 43/53 (81.13%), Query Frame = 2
Query: 2 GSAGQAWRYLAAVQHLLKLEQTKSHVKTFRPQYLVLCGQPEGRDHLIQFVTQL 160
GSAG+A+RYL AVQ+L KLE+ K H+KTFRP YLVLCG P RDHL++F + +
Sbjct: 32 GSAGEAYRYLTAVQNLHKLEKIKKHIKTFRPSYLVLCGDPSHRDHLLRFTSYI 84
BLAST of mRNA_H-akashiwo_Contig1156.2.1 vs. uniprot
Match: A0A7S2TIY3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TIY3_9EUKA) HSP 1 Score: 57.8 bits (138), Expect = 5.370e-9 Identity = 23/53 (43.40%), Postives = 37/53 (69.81%), Query Frame = 2
Query: 2 GSAGQAWRYLAAVQHLLKLEQTKSHVKTFRPQYLVLCGQPEGRDHLIQFVTQL 160
GSA Q+W + + + ++++ + SHVKT+RP YLV+ G+P+ R HL +FV L
Sbjct: 54 GSANQSWEFYSVEKAMMRMRRFVSHVKTYRPHYLVMTGEPQERLHLARFVASL 106
BLAST of mRNA_H-akashiwo_Contig1156.2.1 vs. uniprot
Match: A0A7S4DVY7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DVY7_9EUKA) HSP 1 Score: 59.3 bits (142), Expect = 7.610e-9 Identity = 24/53 (45.28%), Postives = 37/53 (69.81%), Query Frame = 2
Query: 2 GSAGQAWRYLAAVQHLLKLEQTKSHVKTFRPQYLVLCGQPEGRDHLIQFVTQL 160
GSA QAW + + + ++++ + SHVKT+RP YLV+ G+PE R H+ +FV L
Sbjct: 122 GSANQAWEFYSVEKSMMRMRRFVSHVKTYRPHYLVMTGEPEDRLHMARFVGSL 174
BLAST of mRNA_H-akashiwo_Contig1156.2.1 vs. uniprot
Match: A0A0V1C1V4_TRISP (Solute carrier family 12 member 2 (Fragment) n=16 Tax=Trichinella TaxID=6333 RepID=A0A0V1C1V4_TRISP) HSP 1 Score: 59.3 bits (142), Expect = 8.290e-9 Identity = 26/53 (49.06%), Postives = 39/53 (73.58%), Query Frame = 2
Query: 2 GSAGQAWRYLAAVQHLLKLEQTKSHVKTFRPQYLVLCGQPEGRDHLIQFVTQL 160
GS+ +A YL+A++ +LKL+ T+ H+KT+RPQ L+LCG P R LI FV+ +
Sbjct: 585 GSSLEANSYLSALRRMLKLQFTRDHIKTYRPQILLLCGSPVRRPELIDFVSNI 637
BLAST of mRNA_H-akashiwo_Contig1156.2.1 vs. uniprot
Match: A0A1B6CFU0_9HEMI (Uncharacterized protein n=2 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6CFU0_9HEMI) HSP 1 Score: 58.2 bits (139), Expect = 2.110e-8 Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 2
Query: 2 GSAGQAWRYLAAVQHLLKLEQTKSHVKTFRPQYLVLCGQPEGRDHLIQFVT 154
GS+ QA RY +A+ LLKL T HVK +RPQ LVLCGQP+ R L+
Sbjct: 571 GSSTQAQRYKSALSSLLKLSVTTEHVKNYRPQVLVLCGQPQNRPPLVDLAN 621
BLAST of mRNA_H-akashiwo_Contig1156.2.1 vs. uniprot
Match: A0A077ZCE5_TRITR (Solute carrier family 12 n=3 Tax=Trichuris TaxID=36086 RepID=A0A077ZCE5_TRITR) HSP 1 Score: 56.6 bits (135), Expect = 7.400e-8 Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 2
Query: 2 GSAGQAWRYLAAVQHLLKLEQTKSHVKTFRPQYLVLCGQPEGRDHLIQFVTQL 160
GS+GQA Y A+ +L+L T+ HVK +RPQ LV+ G+P R HLI F + +
Sbjct: 531 GSSGQAHAYRTALNAMLRLSHTEEHVKNYRPQMLVMTGEPMLRPHLIDFASSI 583
BLAST of mRNA_H-akashiwo_Contig1156.2.1 vs. uniprot
Match: UPI001455A273 (solute carrier family 12 member 3-like isoform X1 n=2 Tax=Asterias rubens TaxID=7604 RepID=UPI001455A273) HSP 1 Score: 55.5 bits (132), Expect = 1.900e-7 Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 2
Query: 2 GSAGQAWRYLAAVQHLLKLEQTKSHVKTFRPQYLVLCGQPEGRDHLIQFVTQL 160
GS+ QA+ Y A+ + LKL +HVKTFRPQ LVL G PE R L+ FV+ +
Sbjct: 634 GSSNQAFIYTQALTNTLKLNNIPAHVKTFRPQVLVLTGVPECRPALVHFVSHI 686
BLAST of mRNA_H-akashiwo_Contig1156.2.1 vs. uniprot
Match: A0A2C9JCS0_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JCS0_BIOGL) HSP 1 Score: 55.5 bits (132), Expect = 1.900e-7 Identity = 27/58 (46.55%), Postives = 37/58 (63.79%), Query Frame = 2
Query: 2 GSAGQAWRYLAAVQHLLKLEQTKSHVKTFRPQYLVLCGQPEGRDHLIQFVTQLGGRLG 175
GS+ QA Y + +Q LKL + +HVK FRPQ LVL G+PE R L+ F T + ++G
Sbjct: 713 GSSTQAHVYRSLLQSALKLVRIGTHVKNFRPQVLVLSGEPEARPTLVDFCTHITKKMG 770
BLAST of mRNA_H-akashiwo_Contig1156.2.1 vs. uniprot
Match: A0A183C4L7_GLOPA (G_PROTEIN_RECEP_F1_2 domain-containing protein n=1 Tax=Globodera pallida TaxID=36090 RepID=A0A183C4L7_GLOPA) HSP 1 Score: 55.5 bits (132), Expect = 1.900e-7 Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 2
Query: 2 GSAGQAWRYLAAVQHLLKLEQTKSHVKTFRPQYLVLCGQPEGRDHLIQFVTQL 160
GS+GQA Y A+Q++ KLE+T+ HVK +RPQ +VL G P R L+ F +
Sbjct: 1144 GSSGQAHSYRNALQYVSKLERTEEHVKNYRPQLMVLTGNPAARAGLVDFAYSI 1196 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1156.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1156.2.1 >prot_H-akashiwo_Contig1156.2.1 ID=prot_H-akashiwo_Contig1156.2.1|Name=mRNA_H-akashiwo_Contig1156.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=60bp GQRGAGLAVPGGRAAPAEARADQEPRQDLPAPVPGALRAARGPRPPDPVRback to top mRNA from alignment at H-akashiwo_Contig1156:41515..42495- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1156.2.1 ID=mRNA_H-akashiwo_Contig1156.2.1|Name=mRNA_H-akashiwo_Contig1156.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=981bp|location=Sequence derived from alignment at H-akashiwo_Contig1156:41515..42495- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1156:41515..42495- >mRNA_H-akashiwo_Contig1156.2.1 ID=mRNA_H-akashiwo_Contig1156.2.1|Name=mRNA_H-akashiwo_Contig1156.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=180bp|location=Sequence derived from alignment at H-akashiwo_Contig1156:41515..42495- (Heterosigma akashiwo CCMP452)back to top |