mRNA_H-akashiwo_Contig1153.3.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1153.3.1
Unique NamemRNA_H-akashiwo_Contig1153.3.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig1153.3.1 vs. uniprot
Match: F0Y8X1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8X1_AURAN)

HSP 1 Score: 108 bits (271), Expect = 1.530e-24
Identity = 51/106 (48.11%), Postives = 68/106 (64.15%), Query Frame = 1 
Query:    1 MESFVGTPYFLAPELLVKKQLIQYGLKCDTWSLGVLAYILLCGYPPFYGDDEKGIFSSIRHDSLNFYGLAWGRVSADAQRLVELLLTKDQAQRPQMQQLLENEWVA 318
            M + VGTPY++APE+L +     Y LKCD WS+GV+AYILLCGYPPF+GD++K IF  +   S  F    W  +S DA+  V  LL  D  +RP     LE++W+A
Sbjct:  210 MHTRVGTPYYIAPEVLKR----DYTLKCDIWSVGVIAYILLCGYPPFFGDNDKEIFRRVSAGSFTFPSPEWDHISGDAKAFVSTLLDLDPEKRPTAAAALEDKWMA 311
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BLAST of mRNA_H-akashiwo_Contig1153.3.1 vs. uniprot
Match: A0A2R5GW08_9STRA (Protein kinase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GW08_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.330e-24
Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 1 
Query:    1 MESFVGTPYFLAPELLVKKQLIQYGLKCDTWSLGVLAYILLCGYPPFYGDDEKGIFSSIRHDSLNFYGLAWGRVSADAQRLVELLLTKDQAQRPQMQQLLENEW 312
            M +  GTPY+LAPE+L K+    Y  KCD WS GVL YILLCGYPPFYGD+E+ I++ IR    +F    WG VS+ A+ LV  LL  D   RP   + LE++W
Sbjct:  256 MRTRAGTPYYLAPEVLEKR----YDKKCDVWSCGVLMYILLCGYPPFYGDNERQIYNMIRQGVFDFPEAEWGAVSSTAKDLVVKLLDLDPHTRPSAMEALEHDW 355
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BLAST of mRNA_H-akashiwo_Contig1153.3.1 vs. uniprot
Match: A0A7S3PRR7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PRR7_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.530e-24
Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 1 
Query:    1 MESFVGTPYFLAPELLVKKQLIQYGLKCDTWSLGVLAYILLCGYPPFYGDDEKGIFSSIRHDSLNFYGLAWGRVSADAQRLVELLLTKDQAQRPQMQQLLENEWV 315
            M++ VGTPY++APE+L K    QY L CD WS+GV+ YILLCGYPPF+GD EK IF+ I+  S +F    W  +S +A+ L++ +L KD A+R   ++ L + W+
Sbjct:  248 MKTRVGTPYYIAPEVLAK----QYDLACDMWSVGVIMYILLCGYPPFWGDSEKEIFARIKRGSFDFPVEEWKNISKEAKSLIKKMLEKDPAKRVTAKEALMDPWL 348
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BLAST of mRNA_H-akashiwo_Contig1153.3.1 vs. uniprot
Match: A0A7S2SL15_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SL15_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.730e-24
Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 1 
Query:    1 MESFVGTPYFLAPELLVKKQLIQYGLKCDTWSLGVLAYILLCGYPPFYGDDEKGIFSSIRHDSLNFYGLAWGRVSADAQRLVELLLTKDQAQRPQMQQLLENEWV 315
            M++ VGTPY++APE+L K    QY   CD WS+GV+ YILLCGYPPFYGD EK IF  I+  S +F    W  VS +A+ L+ LLL KD A+R      L + W+
Sbjct:  216 MKTRVGTPYYIAPEVLKK----QYDEACDMWSIGVIMYILLCGYPPFYGDTEKEIFRMIQKGSYDFPKQEWAAVSKEAKELIGLLLQKDPAKRIDANSALMHPWI 316
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BLAST of mRNA_H-akashiwo_Contig1153.3.1 vs. uniprot
Match: A0A6U3VIS5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3VIS5_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.700e-23
Identity = 47/105 (44.76%), Postives = 67/105 (63.81%), Query Frame = 1 
Query:    1 MESFVGTPYFLAPELLVKKQLIQYGLKCDTWSLGVLAYILLCGYPPFYGDDEKGIFSSIRHDSLNFYGLAWGRVSADAQRLVELLLTKDQAQRPQMQQLLENEWV 315
            M + VGT Y+++PELL  K    Y   CD WS G++AYILLCGYPPF GD +  IF +I+  S +F   AWG VS +A+  ++ LL KD  +R   ++ L++ W+
Sbjct:   10 MSNPVGTAYYMSPELLKGK----YDQSCDVWSTGIVAYILLCGYPPFNGDTDPDIFEAIKQASFHFPSQAWGHVSPEAKDFIKCLLRKDPRKRFTAEEALKHPWI 110
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BLAST of mRNA_H-akashiwo_Contig1153.3.1 vs. uniprot
Match: A0A1Z5KK10_FISSO (Calcium-dependent protein kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KK10_FISSO)

HSP 1 Score: 105 bits (263), Expect = 2.430e-23
Identity = 52/120 (43.33%), Postives = 76/120 (63.33%), Query Frame = 1 
Query:    1 MESFVGTPYFLAPELLVKKQLIQYGLKCDTWSLGVLAYILLCGYPPFYGDDEKGIFSSIRHDSLNFYGLAWGRVSADAQRLVELLLTKDQAQRPQMQQLLENEWVAEGLAARLQASSLRS 360
            M++ VGTPY++APE+L +    +Y   CD WS+GV+ YILLCGYPPFYGD +  IF S++    +F    W  +S  A+  V  +L KD  +RP   Q L+++W+ E L   ++ SSLR+
Sbjct:  248 MQTKVGTPYYVAPEVLRR----EYTKMCDIWSIGVITYILLCGYPPFYGDSDTQIFESVKVGRFDFPSPEWDDISKSAKAFVTEMLQKDPDKRPDASQALKHKWLKEQLGE-IEPSSLRA 362
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BLAST of mRNA_H-akashiwo_Contig1153.3.1 vs. uniprot
Match: W7T8G8_9STRA (Calcium-dependent protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T8G8_9STRA)

HSP 1 Score: 104 bits (260), Expect = 6.640e-23
Identity = 58/151 (38.41%), Postives = 83/151 (54.97%), Query Frame = 1 
Query:    1 MESFVGTPYFLAPELLVKKQLIQYGLKCDTWSLGVLAYILLCGYPPFYGDDEKGIFSSIRHDSLNFYGLAWGRVSADAQRLVELLLTKDQAQRPQMQQLLENEWVA----EGLAARLQASSLRSIANDASTRRQSGVPELQGLAEVVIVRK 441
            M + VGTPY++APE+L +     Y   CD WS+GV+ YILLCGYPPFYGD +  IF+S+R     F    W  +S  A+ L+  LL+KD  +RP     L +EW      +G   +     LR+     S RR  G+ +L+ +A  +I  +
Sbjct:  274 MTTRVGTPYYIAPEVLNR----MYDKSCDLWSIGVIMYILLCGYPPFYGDTDADIFASVRRAEFTFPSPEWDDISPSAKDLIRKLLSKDPRKRPSAAAALNHEWFQVLKKDGEITQALTEHLRN-----SLRRFIGMNKLKRVALTIIAEQ 415
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BLAST of mRNA_H-akashiwo_Contig1153.3.1 vs. uniprot
Match: A0A7S3IG82_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3IG82_9SPIT)

HSP 1 Score: 103 bits (256), Expect = 6.740e-23
Identity = 49/104 (47.12%), Postives = 67/104 (64.42%), Query Frame = 1 
Query:    1 MESFVGTPYFLAPELLVKKQLIQYGLKCDTWSLGVLAYILLCGYPPFYGDDEKGIFSSIRHDSLNFYGLAWGRVSADAQRLVELLLTKDQAQRPQMQQLLENEW 312
            M++ VGTPY++APE+L  K    Y   CD WSLG++ YILLCGYPPF GD++K IF ++ +  L F    W  VS DA+ L+  +L K+ + R   QQ L+N W
Sbjct:  112 MQTIVGTPYYVAPEVLRGK----YDKSCDIWSLGIILYILLCGYPPFEGDNDKEIFKNVLNQKLVFDPKDWNNVSKDAKDLITNMLDKNPSTRISAQQCLDNSW 211
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BLAST of mRNA_H-akashiwo_Contig1153.3.1 vs. uniprot
Match: A0A7S2FE61_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FE61_9STRA)

HSP 1 Score: 104 bits (259), Expect = 7.900e-23
Identity = 47/104 (45.19%), Postives = 66/104 (63.46%), Query Frame = 1 
Query:    1 MESFVGTPYFLAPELLVKKQLIQYGLKCDTWSLGVLAYILLCGYPPFYGDDEKGIFSSIRHDSLNFYGLAWGRVSADAQRLVELLLTKDQAQRPQMQQLLENEW 312
            M++ VGTPY++APE+L +     Y   CD WS+GV+AYILLCGYPPFYGD +  IF+ I     NF    W  VSA+A+  + ++L  D  +RP   + L++ W
Sbjct:  215 MKTKVGTPYYIAPEVLKR----HYTKACDIWSIGVIAYILLCGYPPFYGDTDSDIFTKIMSCDFNFPAYEWNHVSAEAKDFIVMMLNIDYKRRPTATEALQHRW 314
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BLAST of mRNA_H-akashiwo_Contig1153.3.1 vs. uniprot
Match: A0A7S1GJQ2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJQ2_CYCTE)

HSP 1 Score: 104 bits (259), Expect = 8.440e-23
Identity = 48/123 (39.02%), Postives = 77/123 (62.60%), Query Frame = 1 
Query:    1 MESFVGTPYFLAPELLVKKQLIQYGLKCDTWSLGVLAYILLCGYPPFYGDDEKGIFSSIRHDSLNFYGLAWGRVSADAQRLVELLLTKDQAQRPQMQQLLENEWVAEGLAARLQASSLRSIAN 369
            M++ VGTPY++APE+L +    +Y   CD WS+GV+ YILLCGYPPFYGD +  IF S+R    +F    W  +S DA+  +  LL  D  +R    Q ++++W+A  L++++  +   S+++
Sbjct:  249 MKTKVGTPYYVAPEVLRR----EYTKSCDIWSIGVITYILLCGYPPFYGDSDNEIFESVRVGRYDFPSPEWDDISKDAKEFIGFLLKMDPTKRLTAAQAMKHKWIAGQLSSKIAPARRASVSH 367
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1153.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0Y8X1_AURAN1.530e-2448.11Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A2R5GW08_9STRA3.330e-2450.96Protein kinase, putative n=1 Tax=Hondaea fermental... [more]
A0A7S3PRR7_9STRA3.530e-2447.62Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S2SL15_9STRA3.730e-2450.48Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A6U3VIS5_9STRA1.700e-2344.76Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1Z5KK10_FISSO2.430e-2343.33Calcium-dependent protein kinase n=2 Tax=Fistulife... [more]
W7T8G8_9STRA6.640e-2338.41Calcium-dependent protein n=3 Tax=Monodopsidaceae ... [more]
A0A7S3IG82_9SPIT6.740e-2347.12Hypothetical protein (Fragment) n=1 Tax=Strombidiu... [more]
A0A7S2FE61_9STRA7.900e-2345.19Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1GJQ2_CYCTE8.440e-2339.02Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1153contigH-akashiwo_Contig1153:9276..9813 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009037159.1
PFAMsEF-hand_1,EF-hand_5,EF-hand_6,EF-hand_7,EF-hand_8,Pkinase
Model size538
Max annot lvl2759|Eukaryota
KEGG koko:K13412
KEGG Pathwayko04626,ko05145,map04626,map05145
Hectar predicted targeting categoryother localisation
GOsGO:0000165,GO:0000187,GO:0001817,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002224,GO:0002237,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006082,GO:0006464,GO:0006468,GO:0006690,GO:0006691,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009931,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010646,GO:0010647,GO:0010857,GO:0015630,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032496,GO:0032675,GO:0032680,GO:0033554,GO:0033674,GO:0033993,GO:0034097,GO:0035556,GO:0035924,GO:0036211,GO:0042221,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043487,GO:0043488,GO:0043489,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044351,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0045859,GO:0045860,GO:0045934,GO:0045937,GO:0046777,GO:0048010,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051019,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051338,GO:0051347,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0061013,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070848,GO:0070887,GO:0070935,GO:0071310,GO:0071363,GO:0071704,GO:0071900,GO:0071902,GO:0080090,GO:0080134,GO:0080135,GO:0098657,GO:0140096,GO:1900034,GO:1901564,GO:1901568,GO:1901700,GO:1902369,GO:1902373,GO:1902531,GO:1902533,GO:1903311,GO:1903312,GO:1903555
Exons1
Evalue8.84e-26
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
Cds size444
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387099.2474182-CDS-H-akashiwo_Contig1153:9275..97191681387099.2474182-CDS-H-akashiwo_Contig1153:9275..9719Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1153 9276..9719 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387099.264301-UTR-H-akashiwo_Contig1153:9719..98131681387099.264301-UTR-H-akashiwo_Contig1153:9719..9813Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1153 9720..9813 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1153.3.1prot_H-akashiwo_Contig1153.3.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1153 9276..9719 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1153.3.1

>prot_H-akashiwo_Contig1153.3.1 ID=prot_H-akashiwo_Contig1153.3.1|Name=mRNA_H-akashiwo_Contig1153.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=148bp
MESFVGTPYFLAPELLVKKQLIQYGLKCDTWSLGVLAYILLCGYPPFYGD
DEKGIFSSIRHDSLNFYGLAWGRVSADAQRLVELLLTKDQAQRPQMQQLL
ENEWVAEGLAARLQASSLRSIANDASTRRQSGVPELQGLAEVVIVRK*
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mRNA from alignment at H-akashiwo_Contig1153:9276..9813+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1153.3.1 ID=mRNA_H-akashiwo_Contig1153.3.1|Name=mRNA_H-akashiwo_Contig1153.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=538bp|location=Sequence derived from alignment at H-akashiwo_Contig1153:9276..9813+ (Heterosigma akashiwo CCMP452)
ATGGAAAGTTTTGTTGGTACTCCATATTTTTTGGCCCCTGAACTTTTGGT
AAAGAAACAGTTGATCCAGTACGGGTTGAAATGCGATACTTGGAGCCTTG
GTGTCCTAGCCTACATCCTTTTATGTGGGTATCCACCCTTTTATGGTGAC
GATGAAAAAGGAATTTTTTCCTCGATCCGCCATGACTCCTTGAATTTTTA
TGGGCTTGCCTGGGGGCGGGTTTCAGCTGATGCCCAGCGGTTGGTGGAGC
TGCTGCTAACGAAGGACCAAGCCCAGCGGCCACAGATGCAGCAGCTGCTT
GAGAATGAATGGGTGGCAGAGGGTCTGGCGGCACGCCTGCAGGCTTCCTC
ACTGAGGTCAATTGCCAACGATGCCAGCACTCGAAGGCAAAGTGGTGTTC
CGGAGCTGCAGGGGCTGGCAGAGGTCGTCATTGTTCGCAAGTAAAAGTAA
TTAAGAAAGGCCTGCATTATAGAATGAGTAACGTACATCATCACATACAT
GTTATTTAACTAGAAAATGATTACTAAAGGTTTGTTTG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1153:9276..9813+

>mRNA_H-akashiwo_Contig1153.3.1 ID=mRNA_H-akashiwo_Contig1153.3.1|Name=mRNA_H-akashiwo_Contig1153.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=444bp|location=Sequence derived from alignment at H-akashiwo_Contig1153:9276..9813+ (Heterosigma akashiwo CCMP452)
ATGGAAAGTTTTGTTGGTACTCCATATTTTTTGGCCCCTGAACTTTTGGT
AAAGAAACAGTTGATCCAGTACGGGTTGAAATGCGATACTTGGAGCCTTG
GTGTCCTAGCCTACATCCTTTTATGTGGGTATCCACCCTTTTATGGTGAC
GATGAAAAAGGAATTTTTTCCTCGATCCGCCATGACTCCTTGAATTTTTA
TGGGCTTGCCTGGGGGCGGGTTTCAGCTGATGCCCAGCGGTTGGTGGAGC
TGCTGCTAACGAAGGACCAAGCCCAGCGGCCACAGATGCAGCAGCTGCTT
GAGAATGAATGGGTGGCAGAGGGTCTGGCGGCACGCCTGCAGGCTTCCTC
ACTGAGGTCAATTGCCAACGATGCCAGCACTCGAAGGCAAAGTGGTGTTC
CGGAGCTGCAGGGGCTGGCAGAGGTCGTCATTGTTCGCAAGTAA
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