mRNA_H-akashiwo_Contig1152.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1152.2.1
Unique NamemRNA_H-akashiwo_Contig1152.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1152.2.1 vs. uniprot
Match: A0A6V1P5X7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P5X7_HETAK)

HSP 1 Score: 475 bits (1222), Expect = 2.810e-161
Identity = 237/312 (75.96%), Postives = 273/312 (87.50%), Query Frame = 1
Query:    1 LLTDFQGGFRRKRGCREQGFLLLCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVRQGCILSPIIFNLFINKLYNLIHQNSDDLSGVQIEDLVLFVLLYADDVVLMADNGSDLCALLRLLESFCATSHMNVNVKKTKVVIFGGKSKNPPTVLSSSTVFLYDEKPLEVVDVYKYLGCFFDKDLNFSFHISAAVRRAEKASFSLFRRIDSFRNMKISMKLRLYTSLVLSVLLYGVEVWGLVARKGDLRKLEKFHVSCLRRILMVGPGFP 936
            LL+D QGGFRRKRGCREQ FLLL +L++A R+RGR AHCAFVDFRKAYDSVKHSVLW+RL++LGLGPKL ELL+SIYDKVRCTVRKD++LSDLFPY IGVRQGCILSPIIFNLFI++L N+I QNSD LSG++I DLV+F+LLYADDVVL+ADN +DL +LLR L+ FC  S MNVNVKKTKVVIFG KS++P  +     V L+D KPLEVV+ YKYLGCF DKDLNFSFHI AA++RAE+ASFSLFR I  FRNMK+S+KLRLY +LVLSVLL+ VEVWG +ARK DLRKLEKFH+SCLRRILMVGP FP
Sbjct:  144 LLSDLQGGFRRKRGCREQSFLLLSALLTANRRRGRRAHCAFVDFRKAYDSVKHSVLWKRLDSLGLGPKLTELLRSIYDKVRCTVRKDNQLSDLFPYDIGVRQGCILSPIIFNLFIDELVNVIQQNSDSLSGIEIGDLVVFILLYADDVVLVADNAADLSSLLRSLQEFCTASGMNVNVKKTKVVIFG-KSRDPTNL----PVVLFDNKPLEVVNEYKYLGCFVDKDLNFSFHIGAALKRAERASFSLFRCIGGFRNMKVSLKLRLYKTLVLSVLLFNVEVWGHLARKVDLRKLEKFHLSCLRRILMVGPAFP 450          
BLAST of mRNA_H-akashiwo_Contig1152.2.1 vs. uniprot
Match: A0A7S4DBC8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBC8_HETAK)

HSP 1 Score: 198 bits (503), Expect = 6.630e-57
Identity = 104/194 (53.61%), Postives = 139/194 (71.65%), Query Frame = 1
Query:  352 LYNLIHQNSDDLSGVQIEDLVLFVLLYADDVVLMADNGSDLCALLRLLESFCATSHMNVNVKKTKVVIFGGKSKNPPTVLSSSTVFLYDEKPLEVVDVYKYLGCFFDKDLNFSFHISAAVRRAEKASFSLFRRIDSFRNMKISMKLRLYTSLVLSVLLYGVEVWGLVARKGDLRKLEKFHVSCLRRILMVGPGF 933
            +  ++ Q   +L+GVQ+ DL++F LLYADDVVL+A   + L  LL  L+ FC  S M+VN+ KT +V F   SK+P    S    F++  K L+VV+ YKYLGC+FD++L+F FHI AA++RA KASFS F  I++  N+K S+ +RLY +LVLSVLLY VEVWGL+  KG L+KLEKFH+SCL+RIL VG GF
Sbjct:    1 MVKILAQGGGELAGVQVGDLIIFTLLYADDVVLIAKEAAHLQRLLNSLDVFCGVSAMSVNISKTMIVPFF--SKSPLDEFS----FVFVNKQLKVVNEYKYLGCYFDRELSFKFHIEAALQRAAKASFSFFSDIENLPNLKTSLIVRLYHTLVLSVLLYNVEVWGLLILKGSLKKLEKFHLSCLKRILKVGRGF 188          
BLAST of mRNA_H-akashiwo_Contig1152.2.1 vs. uniprot
Match: A0A023F6P3_TRIIF (Putative endonuclease-reverse transcriptase (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A023F6P3_TRIIF)

HSP 1 Score: 182 bits (462), Expect = 3.400e-49
Identity = 105/314 (33.44%), Postives = 180/314 (57.32%), Query Frame = 1
Query:    1 LLTDFQGGFRRKRGCREQGFLLLCSLISAK-RKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVRQGCILSPIIFNLFINKLYNLIHQNSDDLSGVQIEDLVLFVLLYADDVVLMADNGSDLCALLRLLESFCATSHMNVNVKKTKVVIF--GGKSKNPPTVLSSSTVFLYDEKPLEVVDVYKYLGCFFDKDLNFSFHISAAVRRAEKASFSLFRRIDSFRNMKISMKLRLYTSLVLSVLLYGVEVWGLVARKGDLRKLEKFHVSCLRRILMVGPGF 933
            LL+++Q GFRR     +  F+L C++I  K  +R +  +C FVDF  A+D V  S L+ +L  LG+  K + +L+++Y +  C VR  + +S+ F    GVRQGC+LSPI+F++F++ L  L+        GV++ D V+ +L+YADD+V++ +N   L   + +LES+C    + VN+KK+++V+F  GG+       LS    + Y ++ +EVV+ YKYLG      L+F  HI   V  A+ A  S++  + S + + +S K +++ S+  ++  Y  ++WG   R   L KL +F +  L  +  + P +
Sbjct:   86 LLSEYQAGFRRGYSTLDNLFVL-CNIIKLKFLRRAKKVYCFFVDFSAAFDRVNRSALFLKLLNLGVSSKFVTILRALYRETLCAVRGGNGISEFFSVASGVRQGCLLSPILFSVFVDDLPGLLE------GGVRVADTVVKILMYADDIVILDENPLQLQRNINILESYCQHWGLEVNLKKSQIVVFRKGGR-------LSGKEKWRYGDQEIEVVNNYKYLGVTMTPRLSFDTHIKEKVSAAKLALNSVWMGVISTKMVPLSHKYQIFNSVCRAIACYAAQIWGF-QRYEALEKLLRFFIKKLFSLPSITPNY 384          
BLAST of mRNA_H-akashiwo_Contig1152.2.1 vs. uniprot
Match: A0A023F5J8_TRIIF (Putative endonuclease-reverse transcriptase (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A023F5J8_TRIIF)

HSP 1 Score: 182 bits (462), Expect = 5.740e-48
Identity = 105/314 (33.44%), Postives = 180/314 (57.32%), Query Frame = 1
Query:    1 LLTDFQGGFRRKRGCREQGFLLLCSLISAK-RKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVRQGCILSPIIFNLFINKLYNLIHQNSDDLSGVQIEDLVLFVLLYADDVVLMADNGSDLCALLRLLESFCATSHMNVNVKKTKVVIF--GGKSKNPPTVLSSSTVFLYDEKPLEVVDVYKYLGCFFDKDLNFSFHISAAVRRAEKASFSLFRRIDSFRNMKISMKLRLYTSLVLSVLLYGVEVWGLVARKGDLRKLEKFHVSCLRRILMVGPGF 933
            LL+++Q GFRR     +  F+L C++I  K  +R +  +C FVDF  A+D V  S L+ +L  LG+  K + +L+++Y +  C VR  + +S+ F    GVRQGC+LSPI+F++F++ L  L+        GV++ D V+ +L+YADD+V++ +N   L   + +LES+C    + VN+KK+++V+F  GG+       LS    + Y ++ +EVV+ YKYLG      L+F  HI   V  A+ A  S++  + S + + +S K +++ S+  ++  Y  ++WG   R   L KL +F +  L  +  + P +
Sbjct:  557 LLSEYQAGFRRGYSTLDNLFVL-CNIIKLKFLRRAKKVYCFFVDFSAAFDRVNRSALFLKLLNLGVSSKFVTILRALYRETLCAVRGGNGISEFFSVASGVRQGCLLSPILFSVFVDDLPGLLE------GGVRVADTVVKILMYADDIVILDENPLQLQRNINILESYCQHWGLEVNLKKSQIVVFRKGGR-------LSGKEKWRYGDQEIEVVNNYKYLGVTMTPRLSFDTHIKEKVSAAKLALNSVWMGVISTKMVPLSHKYQIFNSVCRAIACYAAQIWGF-QRYEALEKLLRFFIKKLFSLPSITPNY 855          
BLAST of mRNA_H-akashiwo_Contig1152.2.1 vs. uniprot
Match: UPI001E1D5B82 (uncharacterized protein LOC123545968 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5B82)

HSP 1 Score: 181 bits (458), Expect = 9.860e-48
Identity = 108/312 (34.62%), Postives = 170/312 (54.49%), Query Frame = 1
Query:    1 LLTDFQGGFRRKRGCREQGFLLLCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVRQGCILSPIIFNLFINKLYNLIHQNSDDLSGVQIEDLVLFVLLYADDVVLMADNGSDLCALLRLLESFCATSHMNVNVKKTKVVIFGGKSKNPPTVLSSSTVFLYDEKPLEVVDVYKYLGCFFDKDLNFSFHISAAVRRAEKASFSLFRRIDSFRNMKISMKLRLYTSLVLSVLLYGVEVWGLVARKGDLRKLEKFHVSCLRRILMVGPGFP 936
            +L D Q GFR+KR   +Q   L  ++I  ++K  +    AF+DFRKAYD +  S LW RL   G+  K++  +KS+Y  V  ++R +   ++ F    G+RQGCILSP++FNL+IN L   +   S D+ GV+I D +L +LLYADD+VL+A+N +DL  LL  L  +C  + MN+ V K+K++ F      PP+   ++ VF      LE+VD Y+YLG    + L+ +  + A  + A +A   +  +      +   +  +LY ++V  V+ YG  +WG          ++  H   +R  L VG   P
Sbjct:  281 ILVDEQNGFRKKRSTIDQASSLY-NVIDTRKKLKQSTFAAFIDFRKAYDFINRSKLWNRLCNTGINGKMLSAIKSLYSTVSASIRVNCFSTEWFDVKSGLRQGCILSPLLFNLYINDL--AVFLKSLDI-GVKIGDELLCILLYADDIVLLAENAADLQKLLNALRDWCNLNDMNIYVSKSKIIHF-----RPPSCSRTNQVFTCGNDTLEIVDRYRYLGLLMHEHLDLNVMVKAVAQSASRALGLVIAKCKVMGGVPYDVFTKLYDTVVWPVISYGSAIWGY----RSFSCIDAVHNRAMRFYLGVGRYTP 579          
BLAST of mRNA_H-akashiwo_Contig1152.2.1 vs. uniprot
Match: A0A354GGU0_9FLAO (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Tenacibaculum sp. TaxID=1906242 RepID=A0A354GGU0_9FLAO)

HSP 1 Score: 176 bits (445), Expect = 4.970e-47
Identity = 105/324 (32.41%), Postives = 179/324 (55.25%), Query Frame = 1
Query:    4 LTDFQGGFRRKRGCREQGFLLLCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVRQGCILSPIIFNLFINKLYNLIHQNSDDLSGVQIED------------LVLFVLLYADDVVLMADNGSDLCALLRLLESFCATSHMNVNVKKTKVVIFG-GKSKNPPTVLSSSTVFLYDEKPLEVVDVYKYLGCFFDKDLNFSFHISAAVRRAEKASFSLFRRIDSFRNMKISMKLRLYTSLVLSVLLYGVEVWGLVARKGDLRKLEKFHVSCLRRILMVGPGFP 936
            L + Q GFR         F+L C +    +K+ R  +CAF+D+ KA+D +  S LW +L  +G+  K+I ++ ++YD  +  VRK + LSD F   +GVRQG  LSP++F +++N   + + Q  + L+ +  E             L L++LLYADD +++A++ + L A L  ++ +C  + + +N+ KTKV++F  GK +N P        F Y E+ +EVVD Y YLG   + + +F+  I   + +A KA FSL  +    + + + +++ L+   V+ +LLYG EVWG      ++ ++E F+   L+ +L VG   P
Sbjct:   25 LGEDQAGFREGYSTLNHIFVLHCIIDFYLQKKKRL-YCAFIDYSKAFDLINRSTLWIKLLGIGVKGKIINVIYNLYDSAKSCVRKCNNLSDFFHCNVGVRQGENLSPLLFAIYLNDFESFVAQEYEGLTFLSSEASRLLGDDVFEMYLRLYILLYADDTIVLAESPNQLQAALNSVQRYCEKNSLKLNLTKTKVIVFSRGKIRNIPK-------FWYGEEQVEVVDDYIYLGVKINYNGSFTKAIEKQIDQARKAMFSLITKARRLQ-LPVDLQIELFDKTVVPILLYGCEVWGC----SNISEIEVFYRKFLKIVLKVGKSTP 335          
BLAST of mRNA_H-akashiwo_Contig1152.2.1 vs. uniprot
Match: A0A224X682_9HEMI (Putative endonuclease-reverse transcriptase (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224X682_9HEMI)

HSP 1 Score: 176 bits (447), Expect = 5.490e-46
Identity = 106/314 (33.76%), Postives = 179/314 (57.01%), Query Frame = 1
Query:    1 LLTDFQGGFRRKRGCREQGFLLLCSLISAK-RKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVRQGCILSPIIFNLFINKLYNLIHQNSDDLSGVQIEDLVLFVLLYADDVVLMADNGSDLCALLRLLESFCATSHMNVNVKKTKVVIF--GGKSKNPPTVLSSSTVFLYDEKPLEVVDVYKYLGCFFDKDLNFSFHISAAVRRAEKASFSLFRRIDSFRNMKISMKLRLYTSLVLSVLLYGVEVWGLVARKGDLRKLEKFHVSCLRRILMVGPGF 933
            LL+++Q GFRR     +  F+L  ++I  K  KR +  +C FVDF  A+D V  S L+ +L  LG+  K + +LK++Y +  C VR  + +S+ F    GVRQGC+LSPI+F++F++ L  L+        GV++ D V+ +L+YADD+V++ +N   L   + +L+++C    + VN++K+++V+F  GG+       LS    + Y ++ +EVV+ YKYLG      L+F  HI+  V  A+ A  S++  + S   + +S K RL+ S+  +V  Y  ++WG   R   L KL +F +  L  +  + P +
Sbjct:  486 LLSEYQAGFRRGYSALDNLFVL-SNIIKLKFLKRAQKVYCFFVDFSAAFDRVNRSALFLKLLNLGVSSKFVTILKALYGETVCAVRGGNGMSETFRVASGVRQGCLLSPILFSVFVDDLPGLLE------GGVRVADTVVKILMYADDIVILGENPLQLQRNINILKNYCHHWGLEVNLRKSQIVVFRRGGR-------LSGKEKWRYGDQEIEVVNKYKYLGVTMTPRLSFDTHINERVSSAKMALNSVWSGLVSKNMIPLSHKYRLFNSVCGAVAGYAAQIWGF-QRYEALEKLLRFFIRKLFSLPSITPNY 784          
BLAST of mRNA_H-akashiwo_Contig1152.2.1 vs. uniprot
Match: A0A3C1S4H7_9FLAO (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Tenacibaculum sp. TaxID=1906242 RepID=A0A3C1S4H7_9FLAO)

HSP 1 Score: 176 bits (445), Expect = 8.810e-46
Identity = 105/324 (32.41%), Postives = 179/324 (55.25%), Query Frame = 1
Query:    4 LTDFQGGFRRKRGCREQGFLLLCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVRQGCILSPIIFNLFINKLYNLIHQNSDDLSGVQIED------------LVLFVLLYADDVVLMADNGSDLCALLRLLESFCATSHMNVNVKKTKVVIFG-GKSKNPPTVLSSSTVFLYDEKPLEVVDVYKYLGCFFDKDLNFSFHISAAVRRAEKASFSLFRRIDSFRNMKISMKLRLYTSLVLSVLLYGVEVWGLVARKGDLRKLEKFHVSCLRRILMVGPGFP 936
            L + Q GFR         F+L C +    +K+ R  +CAF+D+ KA+D +  S LW +L  +G+  K+I ++ ++YD  +  VRK + LSD F   +GVRQG  LSP++F +++N   + + Q  + L+ +  E             L L++LLYADD +++A++ + L A L  ++ +C  + + +N+ KTKV++F  GK +N P        F Y E+ +EVVD Y YLG   + + +F+  I   + +A KA FSL  +    + + + +++ L+   V+ +LLYG EVWG      ++ ++E F+   L+ +L VG   P
Sbjct:  444 LGEDQAGFREGYSTLNHIFVLHCIIDFYLQKKKRL-YCAFIDYSKAFDLINRSTLWIKLLGIGVKGKIINVIYNLYDSAKSCVRKCNNLSDFFHCNVGVRQGENLSPLLFAIYLNDFESFVAQEYEGLTFLSSEASRLLGDDVFEMYLRLYILLYADDTIVLAESPNQLQAALNSVQRYCEKNSLKLNLTKTKVIVFSRGKIRNIPK-------FWYGEEQVEVVDDYIYLGVKINYNGSFTKAIEKQIDQARKAMFSLITKARRLQ-LPVDLQIELFDKTVVPILLYGCEVWGC----SNISEIEVFYRKFLKIVLKVGKSTP 754          
BLAST of mRNA_H-akashiwo_Contig1152.2.1 vs. uniprot
Match: A0A1Y1LW36_PHOPY (Reverse transcriptase domain-containing protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1LW36_PHOPY)

HSP 1 Score: 175 bits (444), Expect = 1.500e-45
Identity = 100/307 (32.57%), Postives = 170/307 (55.37%), Query Frame = 1
Query:    1 LLTDFQGGFRRKRGCREQGFLLLCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVRQGCILSPIIFNLFINKLYNLIHQNSDDLSGVQIEDL-VLFVLLYADDVVLMADNGSDLCALLRLLESFCATSHMNVNVKKTKVVIF--GGKSKNPPTVLSSSTVFLYDEKPLEVVDVYKYLGCFFDKDLNFSFHISAAVRRAEKASFSLFRRIDSFRNMKISMKLRLYTSLVLSVLLYGVEVWGLVARKGDLRKLEKFHVSCLRRI 912
            +L D Q GFR+ RGC E  F+L  ++      +  Y +  FVDF+KA+D++ HS LW +L A+G+  K+I  +K+IY+K + T+  + + ++    T GV QG  LSP++F ++I+ + +   +N  D  GV++  +  L +LLYADD V+ A+N  D    L +L ++C  + + +N+ KTKV+ F  G K K       +  VF+++   LE+V+ Y YLG  F     F     + + ++ +A   +   +   ++  +  K RL+ ++V SVLLYG E+W L      L  +E+  V   ++I
Sbjct:  596 VLPDEQAGFRKGRGCSENIFILNAAVSINTAPKSSYLYAIFVDFQKAFDTINHSKLWNKLHAIGISSKIIRTVKAIYEKTKITINNNLESTEAIDMTTGVMQGDCLSPLLFAIYISDIISYYQKNHCD--GVKLTHIRSLIMLLYADDAVIFANNVFDANRKLNILNNYCEENKLTININKTKVMAFHRGRKKK-------TLGVFVFNNSTLEIVEEYTYLGITFSSSGVFKKACESFIEKSSRAIARVKSTLIKVKSECLETKTRLFKAIVSSVLLYGAEIWSL----RYLEMVERVQVKYYKQI 889          
BLAST of mRNA_H-akashiwo_Contig1152.2.1 vs. uniprot
Match: A0A224X5Y1_9HEMI (Putative endonuclease-reverse transcriptase (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224X5Y1_9HEMI)

HSP 1 Score: 173 bits (439), Expect = 6.780e-45
Identity = 103/313 (32.91%), Postives = 175/313 (55.91%), Query Frame = 1
Query:    1 LLTDFQGGFRRKRGCREQGFLLLCSLISAKRKRGRYAHCAFVDFRKAYDSVKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGVRQGCILSPIIFNLFINKLYNLIHQNSDDLSGVQIEDLVLFVLLYADDVVLMADNGSDLCALLRLLESFCATSHMNVNVKKTKVVIF--GGKSKNPPTVLSSSTVFLYDEKPLEVVDVYKYLGCFFDKDLNFSFHISAAVRRAEKASFSLFRRIDSFRNMKISMKLRLYTSLVLSVLLYGVEVWGLVARKGDLRKLEKFHVSCLRRILMVGPGF 933
            LL+++Q GFRR     +  F+L   +     KRG   +  FVDF  A+D V    L+ +L  LG+  K I +LKS+Y +    +R  + +S+ F  T GVRQGC+LSP++F++F++ L + +        GV+I + ++ VL+YADD+VL+ +N   L   + +L+++C    + VN+ K+K++IF  GG+       LSS   + + ++P++VV+ YKYLG      L+F  HI   V  A+ A  +++  + +   + +S KL+L+ ++  S+  Y  +VWG   R   L KL +F +  L  +  V P +
Sbjct:  555 LLSEYQAGFRRGYSTLDNLFVLTNIVKLKFLKRGHKVYSFFVDFSAAFDRVNRRALFLKLYNLGISTKFITVLKSLYAETVSAIRSQNGISEFFQITSGVRQGCLLSPLLFSIFLDNLPSCLE------GGVRIANTIVKVLMYADDIVLLCENPLQLQRNINILKNYCEQWGLEVNLAKSKIIIFRRGGR-------LSSKEKWRFGDRPIDVVNSYKYLGVTLTPRLSFQTHIKERVSLAKMALNTVWSGLFAQNMVPLSHKLQLFNAVCRSIACYAAQVWGF-ERYEVLEKLLRFFIKKLYSLPSVIPNY 853          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1152.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1P5X7_HETAK2.810e-16175.96Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4DBC8_HETAK6.630e-5753.61Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A023F6P3_TRIIF3.400e-4933.44Putative endonuclease-reverse transcriptase (Fragm... [more]
A0A023F5J8_TRIIF5.740e-4833.44Putative endonuclease-reverse transcriptase (Fragm... [more]
UPI001E1D5B829.860e-4834.62uncharacterized protein LOC123545968 n=1 Tax=Merce... [more]
A0A354GGU0_9FLAO4.970e-4732.41Reverse transcriptase domain-containing protein (F... [more]
A0A224X682_9HEMI5.490e-4633.76Putative endonuclease-reverse transcriptase (Fragm... [more]
A0A3C1S4H7_9FLAO8.810e-4632.41Reverse transcriptase domain-containing protein (F... [more]
A0A1Y1LW36_PHOPY1.500e-4532.57Reverse transcriptase domain-containing protein n=... [more]
A0A224X5Y1_9HEMI6.780e-4532.91Putative endonuclease-reverse transcriptase (Fragm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1152contigH-akashiwo_Contig1152:329406..330344 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog126957.SMAR003200-PA
PFAMsExo_endo_phos_2,RVT_1
Model size939
Max annot lvl33208|Metazoa
KEGG rclassRC00063
KEGG koko:K15407
KEGG ReactionR03789,R10209
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.12e-40
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota,39TZY@33154|Opisthokonta,3BI15@33208|Metazoa,3CYKV@33213|Bilateria,420TT@6656|Arthropoda
EC2.4.2.29
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
Cds size939
COG categoryC
BRITEko00000,ko01000,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387098.834694-CDS-H-akashiwo_Contig1152:329405..3303441681387098.834694-CDS-H-akashiwo_Contig1152:329405..330344Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1152 329406..330344 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1152.2.1prot_H-akashiwo_Contig1152.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1152 329406..330344 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1152.2.1

>prot_H-akashiwo_Contig1152.2.1 ID=prot_H-akashiwo_Contig1152.2.1|Name=mRNA_H-akashiwo_Contig1152.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=313bp
LLTDFQGGFRRKRGCREQGFLLLCSLISAKRKRGRYAHCAFVDFRKAYDS
VKHSVLWERLEALGLGPKLIELLKSIYDKVRCTVRKDHKLSDLFPYTIGV
RQGCILSPIIFNLFINKLYNLIHQNSDDLSGVQIEDLVLFVLLYADDVVL
MADNGSDLCALLRLLESFCATSHMNVNVKKTKVVIFGGKSKNPPTVLSSS
TVFLYDEKPLEVVDVYKYLGCFFDKDLNFSFHISAAVRRAEKASFSLFRR
IDSFRNMKISMKLRLYTSLVLSVLLYGVEVWGLVARKGDLRKLEKFHVSC
LRRILMVGPGFPV
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mRNA from alignment at H-akashiwo_Contig1152:329406..330344-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1152.2.1 ID=mRNA_H-akashiwo_Contig1152.2.1|Name=mRNA_H-akashiwo_Contig1152.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=939bp|location=Sequence derived from alignment at H-akashiwo_Contig1152:329406..330344- (Heterosigma akashiwo CCMP452)
CTCTTGACAGATTTTCAGGGCGGTTTCCGTAGAAAGAGAGGGTGTAGGGA GCAGGGCTTTCTGCTTCTATGTTCATTGATTTCGGCAAAGAGAAAAAGGG GTAGGTACGCTCACTGCGCCTTTGTTGACTTCCGGAAAGCGTATGATTCC GTGAAACATTCTGTCCTGTGGGAGCGTCTTGAAGCTTTGGGCTTGGGCCC GAAGTTGATTGAACTCCTTAAGAGTATTTACGACAAAGTAAGATGTACAG TTCGAAAGGACCACAAATTATCGGATCTCTTCCCCTATACAATTGGAGTT CGTCAAGGATGTATTTTATCTCCAATCATTTTTAATCTCTTCATCAACAA ACTGTACAACTTGATACACCAAAACTCGGATGATCTATCAGGGGTCCAAA TTGAAGATCTGGTTCTTTTTGTCTTGCTATATGCAGATGATGTAGTCTTG ATGGCTGATAATGGGAGTGATCTTTGTGCTCTTCTCCGTCTGTTGGAATC CTTCTGTGCCACTTCTCATATGAACGTGAATGTTAAGAAAACAAAGGTTG TAATCTTTGGAGGGAAGAGTAAGAACCCCCCGACAGTACTTTCGTCTTCA ACAGTTTTCCTTTATGACGAGAAACCACTGGAGGTGGTTGATGTGTATAA ATATCTGGGTTGCTTTTTCGATAAAGATCTGAACTTTTCCTTTCATATCA GTGCTGCTGTAAGACGAGCTGAGAAAGCCTCCTTCAGTTTATTCCGTCGG ATTGATAGCTTTAGAAACATGAAAATCTCTATGAAGCTACGTCTATACAC GTCTCTCGTCTTGTCGGTTCTTCTTTATGGTGTAGAAGTGTGGGGCCTCG TCGCTCGGAAAGGAGACTTAAGGAAACTTGAAAAATTTCATGTTTCGTGT CTAAGGAGAATTCTCATGGTGGGTCCTGGTTTCCCGGTT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1152:329406..330344-

>mRNA_H-akashiwo_Contig1152.2.1 ID=mRNA_H-akashiwo_Contig1152.2.1|Name=mRNA_H-akashiwo_Contig1152.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=939bp|location=Sequence derived from alignment at H-akashiwo_Contig1152:329406..330344- (Heterosigma akashiwo CCMP452)
CTCTTGACAGATTTTCAGGGCGGTTTCCGTAGAAAGAGAGGGTGTAGGGA
GCAGGGCTTTCTGCTTCTATGTTCATTGATTTCGGCAAAGAGAAAAAGGG
GTAGGTACGCTCACTGCGCCTTTGTTGACTTCCGGAAAGCGTATGATTCC
GTGAAACATTCTGTCCTGTGGGAGCGTCTTGAAGCTTTGGGCTTGGGCCC
GAAGTTGATTGAACTCCTTAAGAGTATTTACGACAAAGTAAGATGTACAG
TTCGAAAGGACCACAAATTATCGGATCTCTTCCCCTATACAATTGGAGTT
CGTCAAGGATGTATTTTATCTCCAATCATTTTTAATCTCTTCATCAACAA
ACTGTACAACTTGATACACCAAAACTCGGATGATCTATCAGGGGTCCAAA
TTGAAGATCTGGTTCTTTTTGTCTTGCTATATGCAGATGATGTAGTCTTG
ATGGCTGATAATGGGAGTGATCTTTGTGCTCTTCTCCGTCTGTTGGAATC
CTTCTGTGCCACTTCTCATATGAACGTGAATGTTAAGAAAACAAAGGTTG
TAATCTTTGGAGGGAAGAGTAAGAACCCCCCGACAGTACTTTCGTCTTCA
ACAGTTTTCCTTTATGACGAGAAACCACTGGAGGTGGTTGATGTGTATAA
ATATCTGGGTTGCTTTTTCGATAAAGATCTGAACTTTTCCTTTCATATCA
GTGCTGCTGTAAGACGAGCTGAGAAAGCCTCCTTCAGTTTATTCCGTCGG
ATTGATAGCTTTAGAAACATGAAAATCTCTATGAAGCTACGTCTATACAC
GTCTCTCGTCTTGTCGGTTCTTCTTTATGGTGTAGAAGTGTGGGGCCTCG
TCGCTCGGAAAGGAGACTTAAGGAAACTTGAAAAATTTCATGTTTCGTGT
CTAAGGAGAATTCTCATGGTGGGTCCTGGTTTCCCGGTT
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