mRNA_H-akashiwo_Contig1152.1.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1152.1.1 vs. uniprot
Match: A0A7S3XRH0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRH0_HETAK) HSP 1 Score: 265 bits (677), Expect = 5.550e-85 Identity = 126/203 (62.07%), Postives = 161/203 (79.31%), Query Frame = 1
Query: 1 GQIAMHAFTAMTAAKVSSHRRPAGTLELKPVNVNKDVYLEAMINQILPSIKEHWL-KMGYKEIDRLYIQEDNASPHKLRKDPRWVEAVQDWNIRLLPQPPQSPDLNKNDLGFFHSLQTLCWYNDYKSIDELEMKVLLEFNKYDADNNHQKLRDLELTHQTVMKEILLTKGQIVSIPHIHKQKLRKAGKLPEFITMTKEEMDQA 606
GQIA+H F A+ AK SSH RPAGTLE+K VNV +VY++AMI ILP +K+HW KMG + +RLYIQEDNASPHKL +DP+WV+AV+ WNI+LLPQP QSP+LNKNDLGFFHSLQTL WY+D+ + +L +V+ F +Y A++NH KLR+L++THQ +MK+ILL KG V IP I KQK R G+L +F+TMTKEE+D+A
Sbjct: 80 GQIAIHPFCALKPAKKSSHNRPAGTLEMKTVNVTAEVYMKAMIKTILPKVKDHWTTKMGRSKKERLYIQEDNASPHKLAEDPKWVKAVKGWNIKLLPQPAQSPELNKNDLGFFHSLQTLTWYSDFADLSDLRWRVVTAFWRYGAEDNHLKLRNLDITHQHMMKQILLNKGCNVRIPRIRKQKQRSKGELEDFVTMTKEELDKA 282
BLAST of mRNA_H-akashiwo_Contig1152.1.1 vs. uniprot
Match: UPI001C2688CA (uncharacterized protein LOC121745962 n=4 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2688CA) HSP 1 Score: 132 bits (331), Expect = 6.760e-33 Identity = 80/201 (39.80%), Postives = 117/201 (58.21%), Query Frame = 1
Query: 1 GQIAMHAFTAMTAAKVSSHRRPAGTLELKPVN-VNKDVYLEAMINQILPSIKEHWLKMGYKEIDRLYIQEDNASPHKLRKDPRWVEAVQD--WNIRLLPQPPQSPDLNKNDLGFFHSLQTLCWYNDYKSIDELEMKVLLEFNKYDADNNHQKLRDLELTHQTVMKEILLTKG-QIVSIPHIHKQKLRKAGKLPEFITMTKE 591
G+ + FT AA+ +S R GTLE KP+N VNK++ + +INQI+P+IK W K+I IQ+DNA PH + D + EA +NI+++ QPP SPD N NDLGFF ++Q+L K++D+L V+ F++ L + LT Q+ + EIL KG IPH++KQ+LR G LP F+ + K+
Sbjct: 227 GKYGIFPFTTQVAAQRNSKNRVRGTLETKPINSVNKEIMKDCIINQIVPAIKAKWPASSCKDI---IIQQDNAKPHIMPNDQEFKEAANTDGFNIKIVCQPPNSPDTNVNDLGFFRAIQSLQDDKSAKNVDDLLKNVVASFDELSPHT----LDSVFLTLQSCLTEILRVKGGNNYKIPHMNKQRLRNLGLLPMFLEVDKD 420
BLAST of mRNA_H-akashiwo_Contig1152.1.1 vs. uniprot
Match: A0A484KAQ8_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KAQ8_9ASTE) HSP 1 Score: 125 bits (313), Expect = 3.560e-32 Identity = 82/206 (39.81%), Postives = 118/206 (57.28%), Query Frame = 1
Query: 1 GQIAMHAFTAMTAAKVSSHRRPAGTLELKPVNV-NKDVYLEAMINQILPSIKEHWLKMGYKEIDRLYIQEDNASPHKLRKDPRWVEAVQD--WNIRLLPQPPQSPDLNKNDLGFFHSLQTLCWYNDYKSIDELEMKVLLEFNKYDADNNHQKLRDLELTHQTVMKEILLTKG-QIVSIPHIHKQKLRKAGKLPEFITMTKEEMDQA 606
G+I + FT + AK +S RPAGTLE+K V V ++ V +I ++LP+IKE W + IQ+DNA PH +P ++ A +D WNI L QPP SPDLN DLGFF S+ ++ + +++ EL V F D H+KL ++ LT Q VM E+L +G IPHI K L + G+LP+ + +T+E +QA
Sbjct: 21 GKIGIFLFTYLAEAKRASKNRPAGTLEVKAVPVIDRVVMKNILIQKLLPAIKEKWPG----PTKHVIIQQDNAKPHVEGNNPEFLAAAEDGDWNIELKFQPPNSPDLNVLDLGFFRSIDSIQDQSAPRNLSELINAVTTAFQ----DIPHEKLNNVFLTLQGVMGEVLKNRGGNNFRIPHIGKAMLAREGRLPDNVGVTQEVYEQA 218
BLAST of mRNA_H-akashiwo_Contig1152.1.1 vs. uniprot
Match: A0A484KF71_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KF71_9ASTE) HSP 1 Score: 125 bits (313), Expect = 3.630e-31 Identity = 78/206 (37.86%), Postives = 120/206 (58.25%), Query Frame = 1
Query: 1 GQIAMHAFTAMTAAKVSSHRRPAGTLELKPV-NVNKDVYLEAMINQILPSIKEHWLKMGYKEIDRLYIQEDNASPHKLRKDPRWVEAVQ--DWNIRLLPQPPQSPDLNKNDLGFFHSLQTLCWYNDYKSIDELEMKVLLEFNKYDADNNHQKLRDLELTHQTVMKEILLTKG-QIVSIPHIHKQKLRKAGKLPEFITMTKEEMDQA 606
G+I + FT AAK +S R AGT++ KP+ + +DV E M+ Q+LP+I+E W + ++IQ+DNA PH DP +V A Q DW+I+L QPP SPDLN DLGFF ++ + + ++S+ +L V F + Q L ++ LT+Q VM E+L KG IPH+ K++L + G LP+ + ++ E ++A
Sbjct: 70 GKIGIFPFTFQEAAKRTSKNRSAGTMKTKPIPKITRDVMREMMVQQLLPAIREKWPQSS----KHVFIQQDNAKPHVDINDPVFVAAAQESDWDIKLQFQPPNSPDLNVLDLGFFRAIDAIQNKSAHRSLGDLINAVTTAFEQLTP----QVLNNVFLTYQGVMGEVLRHKGGNNFKIPHMGKKRLSREGILPQNLGVSTEVYEEA 267
BLAST of mRNA_H-akashiwo_Contig1152.1.1 vs. uniprot
Match: A0A484NGQ5_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484NGQ5_9ASTE) HSP 1 Score: 124 bits (311), Expect = 8.490e-31 Identity = 81/196 (41.33%), Postives = 112/196 (57.14%), Query Frame = 1
Query: 1 GQIAMHAFTAMTAAKVSSHRRPAGTLELKPV-NVNKDVYLEAMINQILPSIKEHWLKMGYKEIDRLYIQEDNASPHKLRKDPRWVEAVQ--DWNIRLLPQPPQSPDLNKNDLGFFHSLQTLCWYNDYKSIDELEMKVLLEFNKYDADNNHQKLRDLELTHQTVMKEILLTKG-QIVSIPHIHKQKLRKAGKLPEFI 576
G+I + FT AAK +S RPAGT+E+K V + +DV +I Q+LP+I+ W I IQ+DNA PH DP +V A + DW+I+L QPP SPDLN DLGFF S+ L +S+ EL V + +++ A Q L ++ LT+Q VM E+L KG IPH+ K++L + G LPE I
Sbjct: 132 GKIGIFPFTFEEAAKRASKNRPAGTMEIKAVPKITRDVMRSMIIQQLLPAIRAKWPGTSKHVI----IQQDNAKPHININDPEFVSASKEGDWDIQLQFQPPNSPDLNVLDLGFFRSIDALSDKTAPRSMRELITNVTMSYDQLTA----QTLNNVFLTYQEVMGEVLKQKGGNDYKIPHMGKERLAREGMLPENI 319
BLAST of mRNA_H-akashiwo_Contig1152.1.1 vs. uniprot
Match: Q01J13_ORYSA (OSIGBa0101C23.14 protein n=1 Tax=Oryza sativa TaxID=4530 RepID=Q01J13_ORYSA) HSP 1 Score: 123 bits (309), Expect = 1.700e-30 Identity = 76/193 (39.38%), Postives = 114/193 (59.07%), Query Frame = 1
Query: 1 GQIAMHAFTAMTAAKVSSHRRPAGTLELKPVN-VNKDVYLEAMINQILPSIKEHWLKMGYKEIDRLYIQEDNASPHKLRKDPRWVEAVQD--WNIRLLPQPPQSPDLNKNDLGFFHSLQTLCWYNDYKSIDELEMKVLLEFNKYDADNNHQKLRDLELTHQTVMKEILLTKG-QIVSIPHIHKQKLRKAGKLP 567
G+I + FT AAK SS R GT+ELK + V +D+ +I ++LP+IK W + ++IQ+DNA H DP ++ Q+ W+IRL QPP SPDLN DLGFF +LQ+L + +I+E+E V+ + +Y A+ ++ + LT Q M+EI+L KG Q +IPH+ K+ L + G+LP
Sbjct: 133 GKIGIFPFTYWEAAKRSSRSRERGTMELKAMTTVTRDIIRNYLIEKVLPAIKHKW--PNEERGLPIFIQQDNAKTHIAVDDPAFLSVAQEDGWDIRLTCQPPNSPDLNVLDLGFFAALQSLFQKSSPSNIEEIETNVIKAYEEYPANRSNH----VFLTLQGCMREIMLVKGGQHYAIPHMKKRSLERNGQLP 319
BLAST of mRNA_H-akashiwo_Contig1152.1.1 vs. uniprot
Match: UPI000CD7E6F3 (uncharacterized protein LOC111896598 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD7E6F3) HSP 1 Score: 122 bits (307), Expect = 2.310e-30 Identity = 84/206 (40.78%), Postives = 118/206 (57.28%), Query Frame = 1
Query: 1 GQIAMHAFTAMTAAKVSSHRRPAGTLELKPV-NVNKDVYLEAMINQILPSIKEHWLKMGYKEIDRLYIQEDNASPHKLRKDPRWVEAVQ--DWNIRLLPQPPQSPDLNKNDLGFFHSLQTLCWYNDYKSIDELEMKVLLEFNKYDADNNHQKLRDLELTHQTVMKEILLTKG-QIVSIPHIHKQKLRKAGKLPEFITMTKEEMDQA 606
G+I ++ FT + AK SS R AGTLE KP+ +VNK+V +I ++LP IK W G+ I ++IQ+DNA PH D ++EA ++IRL QPP SPDLN DLGFF ++Q+L + IDEL V F + + Q+L ++ LT QT MKEI+ +G +PHI K +L + G LP I + +D A
Sbjct: 115 GKIGIYLFTTLEPAKRSSKNRIAGTLETKPILSVNKEVTRSWLIEKVLPDIKTKW-PQGH--IGPIFIQQDNAKPHIDVNDSEFLEAASRDGFDIRLCFQPPNSPDLNVLDLGFFQAIQSLQEQEVLRIIDELVDAVQTSFERMPS----QQLNNVFLTLQTCMKEIIKVQGGNNYHVPHIGKCRLEREGNLPLQIECGQNLLDDA 313
BLAST of mRNA_H-akashiwo_Contig1152.1.1 vs. uniprot
Match: A0A484N3U6_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484N3U6_9ASTE) HSP 1 Score: 125 bits (314), Expect = 2.470e-30 Identity = 79/201 (39.30%), Postives = 116/201 (57.71%), Query Frame = 1
Query: 1 GQIAMHAFTAMTAAKVSSHRRPAGTLELKPV-NVNKDVYLEAMINQILPSIKEHWLKMGYKEIDRLYIQEDNASPHKLRKDPRWVEAVQ--DWNIRLLPQPPQSPDLNKNDLGFFHSLQTLCWYNDYKSIDELEMKVLLEFNKYDADNNHQKLRDLELTHQTVMKEILLTKG-QIVSIPHIHKQKLRKAGKLPEFITMTKE 591
G+I + FT AAK S RPAG +E KP+ + +DV E ++ Q+LP+I+E W + + IQ+DNA PH DP +V A Q DW+IRL QPP SPDLN DLGFF ++ + + ++S+ +L V L F + Q L ++ LT+Q VM E+L KG IPH+ K++L + G LP+ + ++ E
Sbjct: 271 GKIGIFPFTFQEAAKRRSKNRPAGIMETKPIPKITRDVMREMLVQQLLPAIREKWPQSSKYVV----IQQDNAKPHVDINDPVFVAAAQESDWDIRLQFQPPNSPDLNVLDLGFFRAIDAIQNKSAHRSLGDLITAVTLAFEQLTP----QVLNNVFLTYQGVMGEVLRHKGGNNFKIPHMGKERLSREGILPQNLGVSTE 463
BLAST of mRNA_H-akashiwo_Contig1152.1.1 vs. uniprot
Match: A0A484NGZ4_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484NGZ4_9ASTE) HSP 1 Score: 122 bits (305), Expect = 3.030e-30 Identity = 80/206 (38.83%), Postives = 117/206 (56.80%), Query Frame = 1
Query: 1 GQIAMHAFTAMTAAKVSSHRRPAGTLELKPVNV-NKDVYLEAMINQILPSIKEHWLKMGYKEIDRLYIQEDNASPHKLRKDPRWVEAVQD--WNIRLLPQPPQSPDLNKNDLGFFHSLQTLCWYNDYKSIDELEMKVLLEFNKYDADNNHQKLRDLELTHQTVMKEILLTKG-QIVSIPHIHKQKLRKAGKLPEFITMTKEEMDQA 606
G+I + FT + AK +S RP GTLE+K V V ++ V +I ++LP+IK+ W + IQ+DNA PH +P ++ A +D WNI L QPP SPDLN DLGFF S+ ++ + +++ EL V F D H+KL ++ LT Q VM E+L +G IPHI K L + G+LP+ + +T+E +QA
Sbjct: 94 GKIGIFPFTYLAEAKRASKNRPTGTLEVKAVPVIDRVVMKNILIQKLLPAIKKKWPG----PTKHVIIQQDNAKPHVEGNNPEFLAAAEDGDWNIELKFQPPNSPDLNVLDLGFFRSIDSIQDQSVPRNLSELINAVTTAFQ----DIPHEKLNNVFLTLQGVMGEVLKNRGGNNFKIPHIGKAMLAREGRLPDNVGVTQEVYEQA 291
BLAST of mRNA_H-akashiwo_Contig1152.1.1 vs. uniprot
Match: A0A484MSU7_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484MSU7_9ASTE) HSP 1 Score: 118 bits (295), Expect = 1.030e-29 Identity = 76/193 (39.38%), Postives = 110/193 (56.99%), Query Frame = 1
Query: 40 AKVSSHRRPAGTLELKPV-NVNKDVYLEAMINQILPSIKEHWLKMGYKEIDRLYIQEDNASPHKLRKDPRWVEAVQ--DWNIRLLPQPPQSPDLNKNDLGFFHSLQTLCWYNDYKSIDELEMKVLLEFNKYDADNNHQKLRDLELTHQTVMKEILLTKG-QIVSIPHIHKQKLRKAGKLPEFITMTKEEMDQA 606
AK SS RPAGTLE+K ++N+D + ++ ++LP+IKE W I IQ+DNA PH DP +V+A Q DWNI+L QPP SPDLN DLG+F S+ + + +++L V F A +KL ++ LT Q+VM E+L KG IPH+ K L + G+LP+ + ++E +A
Sbjct: 14 AKRSSKNRPAGTLEVKATTSINRDEMKKMLLEKLLPTIKEKWPGPTRDVI----IQQDNAKPHVDVNDPEFVQAAQEGDWNIKLQFQPPNSPDLNVLDLGYFRSIDAIQDQEAPRKLEDLITAVTTSF----AALTPEKLNNVFLTCQSVMGEVLKHKGGNNFKIPHMGKSSLARLGRLPDNVGASQEVYQEA 198 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1152.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1152.1.1 >prot_H-akashiwo_Contig1152.1.1 ID=prot_H-akashiwo_Contig1152.1.1|Name=mRNA_H-akashiwo_Contig1152.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=198bp MHAFTAMTAAKVSSHRRPAGTLELKPVNVNKDVYLEAMINQILPSIKEHWback to top mRNA from alignment at H-akashiwo_Contig1152:163480..164085+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1152.1.1 ID=mRNA_H-akashiwo_Contig1152.1.1|Name=mRNA_H-akashiwo_Contig1152.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=606bp|location=Sequence derived from alignment at H-akashiwo_Contig1152:163480..164085+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1152:163480..164085+ >mRNA_H-akashiwo_Contig1152.1.1 ID=mRNA_H-akashiwo_Contig1152.1.1|Name=mRNA_H-akashiwo_Contig1152.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=594bp|location=Sequence derived from alignment at H-akashiwo_Contig1152:163480..164085+ (Heterosigma akashiwo CCMP452)back to top |