mRNA_H-akashiwo_Contig1149.9.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1149.9.1
Unique NamemRNA_H-akashiwo_Contig1149.9.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1149.9.1 vs. uniprot
Match: A0A7S3XUZ5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUZ5_HETAK)

HSP 1 Score: 253 bits (645), Expect = 1.040e-83
Identity = 122/131 (93.13%), Postives = 128/131 (97.71%), Query Frame = 1
Query:    1 VVYTDGSKKESGVGAAFVAQDPEGQNVGQGLFKLPDYCNNYQVEAVAQREGVIWTKEVGHPGVQSWVIATDGGAVLASMKGQRRMTSLVGEVMREVEDGHSFVYVPGHQGHAGNEMADALAKEATVSGRRV 393
            VVYTDGSKKESGVGAAFVAQDPEGQNVGQGLFKLPDYC+NYQ EAV QREGVIWTKEVGHPGVQ+WVIA+DGGAVLASMKGQRRMTSLVGEV+RE EDGHSFVYVPGHQGHAGNE+ADALAK+ATVSGRRV
Sbjct:   51 VVYTDGSKKESGVGAAFVAQDPEGQNVGQGLFKLPDYCSNYQAEAVVQREGVIWTKEVGHPGVQNWVIASDGGAVLASMKGQRRMTSLVGEVVREAEDGHSFVYVPGHQGHAGNEVADALAKKATVSGRRV 181          
BLAST of mRNA_H-akashiwo_Contig1149.9.1 vs. uniprot
Match: A0A7S3XUZ3_HETAK (Hypothetical protein (Fragment) n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUZ3_HETAK)

HSP 1 Score: 253 bits (645), Expect = 3.090e-82
Identity = 122/131 (93.13%), Postives = 128/131 (97.71%), Query Frame = 1
Query:    1 VVYTDGSKKESGVGAAFVAQDPEGQNVGQGLFKLPDYCNNYQVEAVAQREGVIWTKEVGHPGVQSWVIATDGGAVLASMKGQRRMTSLVGEVMREVEDGHSFVYVPGHQGHAGNEMADALAKEATVSGRRV 393
            VVYTDGSKKESGVGAAFVAQDPEGQNVGQGLFKLPDYC+NYQ EAV QREGVIWTKEVGHPGVQ+WVIA+DGGAVLASMKGQRRMTSLVGEV+RE EDGHSFVYVPGHQGHAGNE+ADALAK+ATVSGRRV
Sbjct:  154 VVYTDGSKKESGVGAAFVAQDPEGQNVGQGLFKLPDYCSNYQAEAVVQREGVIWTKEVGHPGVQNWVIASDGGAVLASMKGQRRMTSLVGEVVREAEDGHSFVYVPGHQGHAGNEVADALAKKATVSGRRV 284          
BLAST of mRNA_H-akashiwo_Contig1149.9.1 vs. uniprot
Match: A0A7S3XV03_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV03_HETAK)

HSP 1 Score: 216 bits (549), Expect = 1.640e-69
Identity = 103/109 (94.50%), Postives = 107/109 (98.17%), Query Frame = 1
Query:    1 VVYTDGSKKESGVGAAFVAQDPEGQNVGQGLFKLPDYCNNYQVEAVAQREGVIWTKEVGHPGVQSWVIATDGGAVLASMKGQRRMTSLVGEVMREVEDGHSFVYVPGHQ 327
            VVYTDGSKKESGVGAAFVAQDPEGQNVGQGLFKLPDYC+NYQ EAVAQREGVIWTKEVGHPGVQ+WVIA+DGGAVLASMKGQRRMTSLVGEV+RE EDGHSFVYVPGHQ
Sbjct:   49 VVYTDGSKKESGVGAAFVAQDPEGQNVGQGLFKLPDYCSNYQAEAVAQREGVIWTKEVGHPGVQNWVIASDGGAVLASMKGQRRMTSLVGEVVREAEDGHSFVYVPGHQ 157          
BLAST of mRNA_H-akashiwo_Contig1149.9.1 vs. uniprot
Match: A0A7S3Y8S2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8S2_HETAK)

HSP 1 Score: 188 bits (477), Expect = 2.000e-53
Identity = 93/156 (59.62%), Postives = 116/156 (74.36%), Query Frame = 1
Query:    4 VYTDGSKKESG-VGAAFVAQDPEGQNVGQGLFKLPDYCNNYQVEAVAQREGVIWTKEVGHPGVQSWVIATDGGAVLASMKGQRRMTSLVGEVMREVEDGHSFVYVPGHQGHAGNEMADALAKEATVSGRRVEVAIPRAYTRRLCRNRSWQLWSQEW 468
            ++TDGSK E G VGAAFVA +  G+ VG+GL++LP YC  YQ E +AQRE   WTKE G  G   W++A+D  AVLA +K  RRMT LV E+ +EVED HSFVY+PGHQGH GNE+AD LAKEA  +G  VEV +PRA+TRRL + R+W +W+QEW
Sbjct:  378 IFTDGSKLEDGSVGAAFVAFNRRGREVGRGLYRLPHYCTVYQAEGLAQRESARWTKEPGRGG--EWMVASDSLAVLACLKSGRRMTRLVSEIAQEVEDRHSFVYIPGHQGHEGNEVADQLAKEAANAGIEVEVDVPRAFTRRLAKERTWGVWAQEW 531          
BLAST of mRNA_H-akashiwo_Contig1149.9.1 vs. uniprot
Match: A0A7S4DA11_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA11_HETAK)

HSP 1 Score: 170 bits (431), Expect = 4.580e-50
Identity = 86/157 (54.78%), Postives = 107/157 (68.15%), Query Frame = 1
Query:    1 VVYTDGSK-KESGVGAAFVAQDPEGQNVGQGLFKLPDYCNNYQVEAVAQREGVIWTKEVGHPGVQSWVIATDGGAVLASMKGQRRMTSLVGEVMREVEDGHSFVYVPGHQGHAGNEMADALAKEATVSGRRVEVAIPRAYTRRLCRNRSWQLWSQEW 468
            V++TDGSK    GVGAAFVA D +G     G FKLPD+  NYQ EAV  REG+ W +E        WV+ATDG AVL++M+G  RMT LV +V+ +  +G SFVY+P H+GHAGNE AD LAK A   G RVEV +PR YT+ L R R+W+LW+ EW
Sbjct:   78 VIFTDGSKIPGQGVGAAFVAMDKDGVVQASGKFKLPDFSTNYQAEAVGMREGLEWVEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHKGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRLWAAEW 234          
BLAST of mRNA_H-akashiwo_Contig1149.9.1 vs. uniprot
Match: A0A7S3Y0N9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0N9_HETAK)

HSP 1 Score: 170 bits (431), Expect = 1.230e-47
Identity = 86/157 (54.78%), Postives = 107/157 (68.15%), Query Frame = 1
Query:    1 VVYTDGSK-KESGVGAAFVAQDPEGQNVGQGLFKLPDYCNNYQVEAVAQREGVIWTKEVGHPGVQSWVIATDGGAVLASMKGQRRMTSLVGEVMREVEDGHSFVYVPGHQGHAGNEMADALAKEATVSGRRVEVAIPRAYTRRLCRNRSWQLWSQEW 468
            V++TDGSK    GVGAAFVA D +G     G FKLPD+  NYQ EAV  REG+ W +E        WV+ATDG AVL++M+G  RMT LV +V+ +  +G SFVY+P H+GHAGNE AD LAK A   G RVEV +PR YT+ L R R+W+LW+ EW
Sbjct:  232 VIFTDGSKIPGQGVGAAFVAMDKDGVVQASGKFKLPDFSTNYQAEAVGMREGLEWVEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHKGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRLWAAEW 388          
BLAST of mRNA_H-akashiwo_Contig1149.9.1 vs. uniprot
Match: A0A7S3Y0N7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0N7_HETAK)

HSP 1 Score: 165 bits (418), Expect = 1.140e-46
Identity = 85/156 (54.49%), Postives = 105/156 (67.31%), Query Frame = 1
Query:    1 VVYTDGSK-KESGVGAAFVAQDPEGQNVGQGLFKLPDYCNNYQVEAVAQREGVIWTKEVGHPGVQSWVIATDGGAVLASMKGQRRMTSLVGEVMREVEDGHSFVYVPGHQGHAGNEMADALAKEATVSGRRVEVAIPRAYTRRLCRNRSWQLWSQE 465
            V++TDGSK    GVGAAFVA D +G     G FKLPD+  NYQ EAV  REG+ W +E        WV+ATDG AVL++M+G  RMT LV +V+ +  +G SFVY+P H+GHAGNE AD LAK A   G RVEV +PR YT+ L R R+W+LW  E
Sbjct:  232 VIFTDGSKIPGQGVGAAFVAMDKDGVVQASGKFKLPDFSTNYQAEAVGMREGLEWVEEDEGRKAGKWVVATDGLAVLSAMQGGSRMTPLVAQVVDKAREGISFVYIPAHKGHAGNEKADELAKAAVEEGVRVEVQVPRGYTKGLARERTWRLWVAE 387          
BLAST of mRNA_H-akashiwo_Contig1149.9.1 vs. uniprot
Match: A0A7S4DD44_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD44_HETAK)

HSP 1 Score: 155 bits (391), Expect = 9.000e-41
Identity = 82/159 (51.57%), Postives = 108/159 (67.92%), Query Frame = 1
Query:    1 VVYTDGSK-KESGVGAAFVAQDPEGQNVGQGLFKLPDYCNNYQVEAVAQREGV--IWTKEVGHPGVQSWVIATDGGAVLASMKGQRRMTSLVGEVMREVEDGHSFVYVPGHQGHAGNEMADALAKEATVSGRRVEVAIPRAYTRRLCRNRSWQLWSQEW 468
            V++TDGSK  E GVGAA+VA  P G+    GLFKLPDYC  YQ EAVA RE    + ++E      +  ++A+D  AVL+S+ GQ RMT+LV E+      G SF+Y+PGH+GHAGNE AD LAK A   G  V+V +PRA+TR+L R R+W+ W++EW
Sbjct:  701 VIFTDGSKIPEKGVGAAYVAMGPGGEVEASGLFKLPDYCTVYQAEAVALRESQKRVESRE------ERRLMASDSRAVLSSVSGQSRMTTLVAEIADGARAGDSFLYIPGHKGHAGNEKADELAKLAVEMGEEVQVPVPRAHTRQLARERTWRRWAEEW 853          
BLAST of mRNA_H-akashiwo_Contig1149.9.1 vs. uniprot
Match: A0A7S4D5N4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5N4_HETAK)

HSP 1 Score: 110 bits (274), Expect = 2.230e-28
Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 1
Query:  130 EAVAQREGVIWTKEVGHPGVQSWVIATDGGAVLASMKGQRRMTSLVGEVMREVEDGHSFVYVPGHQGHAGNEMADALAKEATVSGRRVEVAIPRAYTRRLCR 435
            E +AQRE   WTK  G  G   W++A+D  AVLA ++  R MT LV E+ +EVE+ HSFVY+PGHQGH  N+MAD LAKEA  +G   EV +PRA+TRRL +
Sbjct:    4 EGLAQRESARWTKGPGRGG--EWMVASDSLAVLACLRSGRGMTRLVSEIAQEVEERHSFVYIPGHQGHKENKMADQLAKEAATAGVGAEVNVPRAFTRRLAK 103          
BLAST of mRNA_H-akashiwo_Contig1149.9.1 vs. uniprot
Match: A0A7S3Y954_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y954_HETAK)

HSP 1 Score: 94.0 bits (232), Expect = 8.580e-22
Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = 1
Query:    4 VYTDGSKKESGVGAAFVAQDPEGQNVGQGLFKLPDYCNNYQVEAVAQREGVIWTKEVGHPGVQSWVIATDGGAVLASMKGQRRMTSLVGEVMREVEDGHSFVYVPGHQGHAGNEMADALAKEATVSG 384
            ++TDGSK++ GVGAAFV  D +G+ +  GL +L  +              + W +  GH   + WV+A+D  AVL+++  QRR+T +  EV+R   D HS VYVPGHQG  GN  AD LA     +G
Sbjct:   10 IFTDGSKQDEGVGAAFVVVDGQGRVLATGLLRLSPWAT------------LEWCR--GHQQERGWVVASDSCAVLSNVLSQRRLTPITAEVVRLAGDCHSLVYVPGHQGILGNGEADRLANLPVKNG 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1149.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XUZ5_HETAK1.040e-8393.13Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3XUZ3_HETAK3.090e-8293.13Hypothetical protein (Fragment) n=4 Tax=Heterosigm... [more]
A0A7S3XV03_HETAK1.640e-6994.50Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y8S2_HETAK2.000e-5359.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4DA11_HETAK4.580e-5054.78Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y0N9_HETAK1.230e-4754.78Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y0N7_HETAK1.140e-4654.49Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4DD44_HETAK9.000e-4151.57Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S4D5N4_HETAK2.230e-2854.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y954_HETAK8.580e-2240.94Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1149contigH-akashiwo_Contig1149:326853..327320 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog13037.EHJ66888
Model size468
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.17e-09
EggNOG OGs2EYGC@1|root,2SZZJ@2759|Eukaryota,38VNT@33154|Opisthokonta,3C7AH@33208|Metazoa,3DNAK@33213|Bilateria,42C7S@6656|Arthropoda,3SSQ3@50557|Insecta,44AD7@7088|Lepidoptera
Cds size468
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387098.2822785-CDS-H-akashiwo_Contig1149:326852..3273201681387098.2822785-CDS-H-akashiwo_Contig1149:326852..327320Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1149 326853..327320 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1149.9.1prot_H-akashiwo_Contig1149.9.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1149 326853..327320 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1149.9.1

>prot_H-akashiwo_Contig1149.9.1 ID=prot_H-akashiwo_Contig1149.9.1|Name=mRNA_H-akashiwo_Contig1149.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=156bp
VVYTDGSKKESGVGAAFVAQDPEGQNVGQGLFKLPDYCNNYQVEAVAQRE
GVIWTKEVGHPGVQSWVIATDGGAVLASMKGQRRMTSLVGEVMREVEDGH
SFVYVPGHQGHAGNEMADALAKEATVSGRRVEVAIPRAYTRRLCRNRSWQ
LWSQEW
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mRNA from alignment at H-akashiwo_Contig1149:326853..327320+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1149.9.1 ID=mRNA_H-akashiwo_Contig1149.9.1|Name=mRNA_H-akashiwo_Contig1149.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=468bp|location=Sequence derived from alignment at H-akashiwo_Contig1149:326853..327320+ (Heterosigma akashiwo CCMP452)
GTGGTATACACAGACGGATCTAAGAAGGAGAGCGGGGTGGGGGCGGCTTT TGTAGCGCAGGATCCAGAGGGGCAGAATGTCGGGCAGGGACTTTTCAAGC TTCCCGACTACTGCAACAACTATCAGGTGGAGGCGGTGGCGCAGCGGGAG GGTGTGATTTGGACCAAGGAAGTTGGACATCCTGGGGTGCAGAGTTGGGT GATTGCGACTGACGGCGGCGCAGTTCTGGCGAGTATGAAGGGCCAACGGC GCATGACTTCACTGGTGGGCGAAGTGATGCGAGAGGTGGAGGATGGACAC TCTTTTGTGTACGtCCCGGGGCACCAGGGACATGCGGGCAACGAGATGGC GGACGCTCTGGCGAAGGAGGCGACAGTCAGTGGGAGGAGAGTGGAGGTGG CAATCCCAAGGGCGTACACACGGAGGCTGTGCAGGAATAGGTCGTGGCAG CTGTGGTCGCAGGAGTGG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1149:326853..327320+

>mRNA_H-akashiwo_Contig1149.9.1 ID=mRNA_H-akashiwo_Contig1149.9.1|Name=mRNA_H-akashiwo_Contig1149.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=468bp|location=Sequence derived from alignment at H-akashiwo_Contig1149:326853..327320+ (Heterosigma akashiwo CCMP452)
GTGGTATACACAGACGGATCTAAGAAGGAGAGCGGGGTGGGGGCGGCTTT
TGTAGCGCAGGATCCAGAGGGGCAGAATGTCGGGCAGGGACTTTTCAAGC
TTCCCGACTACTGCAACAACTATCAGGTGGAGGCGGTGGCGCAGCGGGAG
GGTGTGATTTGGACCAAGGAAGTTGGACATCCTGGGGTGCAGAGTTGGGT
GATTGCGACTGACGGCGGCGCAGTTCTGGCGAGTATGAAGGGCCAACGGC
GCATGACTTCACTGGTGGGCGAAGTGATGCGAGAGGTGGAGGATGGACAC
TCTTTTGTGTACGtCCCGGGGCACCAGGGACATGCGGGCAACGAGATGGC
GGACGCTCTGGCGAAGGAGGCGACAGTCAGTGGGAGGAGAGTGGAGGTGG
CAATCCCAAGGGCGTACACACGGAGGCTGTGCAGGAATAGGTCGTGGCAG
CTGTGGTCGCAGGAGTGG
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