mRNA_H-akashiwo_Contig1149.10.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1149.10.1 vs. uniprot
Match: A0A6U0JNC6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JNC6_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.030e-61 Identity = 108/205 (52.68%), Postives = 137/205 (66.83%), Query Frame = 1
Query: 1 LEVADMAWEVKCREEDLRHRAVENERRRIDDAXXAVDEKSQQLKAVSHLSALVAGFAMVSMVELNIPPDLNDVLLVTFGTTAGLVVACCLFAMLNCTLMLVAICKYDCKIREVPFEDFWRKRCLSDWTVSFRAFNVGLTLFLALLAQMGWVTFHSHPS-RNVAASFITVIAATTTGIWLVHIKGKWGDFIKKDRSSLFHHHSTAA 612
+++ADMAWEVKCREED++ RA+EN XX K+QQLKAVSH SAL+AGF+MV +VE+ IP DL+ LLVTFG T VV+ L AMLN T +LVAI +YDC RE PF DFWRKRC SDW ++ +AF +G+ LFL +LA +GWV F H S R A++ +T IA T +W H KWG F+ + L H+ AA
Sbjct: 12 MDMADMAWEVKCREEDMKQRALENXXXXXXXXXXXXXXKAQQLKAVSHQSALIAGFSMVVLVEIQIPTDLSPGLLVTFGCTTAGVVSLMLIAMLNATYILVAILRYDCVKRETPFSDFWRKRCESDWQLALKAFGLGVPLFLCVLALIGWVIFWDHESARYYASALVTTIALVTLLLWFAHTDRKWGKFLMSTEAKL--HNPNAA 214
BLAST of mRNA_H-akashiwo_Contig1149.10.1 vs. uniprot
Match: A0A7S4NBN3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NBN3_9STRA) HSP 1 Score: 200 bits (508), Expect = 5.520e-61 Identity = 106/197 (53.81%), Postives = 130/197 (65.99%), Query Frame = 1
Query: 1 LEVADMAWEVKCREEDLRHRAVENERRRIDDAXXAVDEKSQQLKAVSHLSALVAGFAMVSMVELNIPPDLNDVLLVTFGTTAGLVVACCLFAMLNCTLMLVAICKYDCKIREVPFEDFWRKRCLSDWTVSFRAFNVGLTLFLALLAQMGWVTFHSHPSRNVAAS-FITVIAATTTGIWLVHIKGKWGDFIKKDRSSL 588
+E+ADMAWEVKCREED++ RA+EN XX K+QQLKAVSH SAL+AGF+MV +VE+ IP DL+ VLLV FG T VV+ L +MLN T +LVAI +YDC RE PF +FWRKRC SDW + RAF + LF+ +LAQ+GWV F H S + AS ITVIA T W H KWG F+ + L
Sbjct: 11 MEMADMAWEVKCREEDMKQRALENXXXXXXXXXXXXXXKAQQLKAVSHQSALIAGFSMVVLVEVQIPSDLHPVLLVMFGCTTAGVVSLMLVSMLNSTFVLVAILRYDCVRREAPFAEFWRKRCESDWKFALRAFGYAVPLFMCVLAQIGWVVFWDHESARIYASTLITVIAMVTIVFWFAHTDRKWGGFLLSSEARL 207
BLAST of mRNA_H-akashiwo_Contig1149.10.1 vs. uniprot
Match: A0A6S9GQE6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9GQE6_9STRA) HSP 1 Score: 187 bits (476), Expect = 5.300e-56 Identity = 102/197 (51.78%), Postives = 126/197 (63.96%), Query Frame = 1
Query: 1 LEVADMAWEVKCREEDLRHRAVENERRRIDDAXXAVDEKSQQLKAVSHLSALVAGFAMVSMVELNIPPDLNDVLLVTFGTTAGLVVACCLFAMLNCTLMLVAICKYDCKIREVPFEDFWRKRCLSDWTVSFRAFNVGLTLFLALLAQMGWVTFHSHPS-RNVAASFITVIAATTTGIWLVHIKGKWGDFIKKDRSSL 588
+E+ADMAWE+KCREED XX +QQLKAVS+ SAL+AGF+MV +VE+ IP ++N VLLVTFG T VV L AMLN T MLVAI +YDC REVPF FWR RC SDW + RAF G+ LFL +LAQ+GWV F H S R +A+S +T +A T IW H + KW DF+ + + L
Sbjct: 22 MEMADMAWEMKCREEDXXXXXXXXXXXXXXXXXXXXXXXAQQLKAVSNQSALIAGFSMVVLVEVQIPKNMNPVLLVTFGCTTAAVVGLMLTAMLNSTFMLVAILRYDCVQREVPFAKFWRTRCESDWKFALRAFAYGVPLFLCVLAQIGWVVFWEHQSARYIASSLVTFVAMCTIIIWFAHTERKWRDFLLRSDAKL 218
BLAST of mRNA_H-akashiwo_Contig1149.10.1 vs. uniprot
Match: A0A7S2S1Q7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1Q7_9STRA) HSP 1 Score: 183 bits (465), Expect = 9.520e-54 Identity = 100/214 (46.73%), Postives = 135/214 (63.08%), Query Frame = 1
Query: 13 DMAWEVKCREEDLRHRAVENERRRIDDAXXAVD-------EKSQQLKAVSHLSALVAGFAMVSMVELNIPPDLNDVLLVTFGTTAGLVVACCLFAMLNCTLMLVAICKYDCKI-----------REVPFEDFWRKRCLSDWTVSFRAFNVGLTLFLALLAQMGWVTFHSH--PSRNVAASFITVIAATTTGIWLVHIKGKWGDFIKKDRSSLFH 594
DMAW+V+CR+ED+ RA EN RRRI XX EK++QLKA+SHLSAL+AGFAM+ MVE+ +P DL+ LLV FG T+ VV L AML+ T++L+AI K+DCK R FE+FW C DW ++++AF G+ LF+ +LAQ+GW+ FH + RN+AAS +T++AA T+ W H KWG FIK + H
Sbjct: 16 DMAWDVRCRDEDMVQRATENHRRRIXXXXXXXXXXXXXXXEKAEQLKAISHLSALIAGFAMIVMVEIQLPDDLHLGLLVIFGGTSAGVVGLMLIAMLSSTMVLIAILKFDCKSVADTASSGRPPRFQSFEEFWTTLCEDDWQMAYQAFTKGVPLFMCVLAQLGWIIFHGYGVKDRNIAASIVTIVAALTSCWWFTHAVSKWGYFIKHSATGEGH 229
BLAST of mRNA_H-akashiwo_Contig1149.10.1 vs. uniprot
Match: A0A7S1BSJ4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BSJ4_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.480e-52 Identity = 96/198 (48.48%), Postives = 126/198 (63.64%), Query Frame = 1
Query: 1 LEVADMAWEVKCREEDLRHRAVENERRRIDDAXXAVDEKSQQLKAVSHLSALVAGFAMVSMVELNIPPDLNDVLLVTFGTTAGLVVACCLFAMLNCTLMLVAICKYDCKIREVPFEDFWRKRCLSDWTVSFRAFNVGLTLFLALLAQMGWVTFHSHPSRNVAASFITVIAATTTGIWLVHIKGKW-GDFIKKDRSSLF 591
+EVADMAWEVKCREED++ R+ XX KSQQLKAVSHLSAL+AGFAMV +VE++IP + LL+ FG +V++ L AMLN LMLVAI KYDC RE+PF FWRKRC +D+ + RAF +G+ +F+ +L +GWV F +S +T IA T G+W H + KW G + +S+F
Sbjct: 9 MEVADMAWEVKCREEDMKQRSXXXXXXXXXXXXXXXXXKSQQLKAVSHLSALIAGFAMVVLVEISIPENFPGPLLMAFGVATSIVISLMLVAMLNACLMLVAINKYDCIRREIPFNVFWRKRCETDFVYALRAFLLGVPVFICVLGLVGWVVFWDRDWGVACSSSVTAIAVATVGLWFGHTERKWVGWIVATGGASMF 206
BLAST of mRNA_H-akashiwo_Contig1149.10.1 vs. uniprot
Match: B8BUZ2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUZ2_THAPS) HSP 1 Score: 175 bits (444), Expect = 1.360e-50 Identity = 89/190 (46.84%), Postives = 119/190 (62.63%), Query Frame = 1
Query: 1 LEVADMAWEVKCREEDLRHRAVENERRRIDDAXXAVDEKSQQLKAVSHLSALVAGFAMVSMVELNIPPDLNDVLLVTFGTTAGLVVACCLFAMLNCTLMLVAICKYDCKIREVPFEDFWRKRCLSDWTVSFRAFNVGLTLFLALLAQMGWVTFHSHPSRNVAASFITVIAATTTGIWLVHIKGKWGDFIK 570
+E+ADMAWEVKCREED++ RA+ENE XX SALVAGF+MV +VE NIPPD+N LL FG V+A L + LN T MLVAI +YDC REVPF++FWRKRC DW ++ R F+ G+ LF+ ++A + WV+F H S +AS +T I+ +W + KWG+F++
Sbjct: 8 MEMADMAWEVKCREEDMKQRALENEXXXXXXXXXXXXXXXXXXXXXXXXSALVAGFSMVVLVESNIPPDINGALLTLFGGVTACVIALMLVSTLNATYMLVAILRYDCVNREVPFDEFWRKRCEPDWKMALRTFSYGIPLFMVVVALVAWVSFWDHESLYYSASVVTAISVMVLILWFGSTERKWGEFLR 197
BLAST of mRNA_H-akashiwo_Contig1149.10.1 vs. uniprot
Match: K0S0L8_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S0L8_THAOC) HSP 1 Score: 166 bits (420), Expect = 1.120e-46 Identity = 86/189 (45.50%), Postives = 118/189 (62.43%), Query Frame = 1
Query: 1 LEVADMAWEVKCREEDLRHRAVENERRRIDDAXXAVDEKSQQLKAVSHLSALVAGFAMVSMVELNIPPDLNDVLLVTFGTTAGLVVACCLFAMLNCTLMLVAICKYDCKIREVPFEDFWRKRCLSDWTVSFRAFNVGLTLFLALLAQMGWVTFHSHPSRNVAASFITVIAATTTGIWLVHIKGKWGDFI 567
+E+ADMAWEVKCREED++ RA+ENE XX K+QQL+ V++ AL AGF+MV +VE +IP LN LL FG+ + +A L + LN T +LVAI +YDC R+VPF +FW KRC DW ++ R F+ G+ FL +++ + WVTF S V+AS +T I+ T W KW F+
Sbjct: 8 MEMADMAWEVKCREEDMKQRALENEXXXXXXXXXXXXXKAQQLQVVANQGALFAGFSMVVLVESSIPEALNGALLAVFGSAVAMTIALFLVSTLNSTYILVAILRYDCVRRDVPFSEFWNKRCEPDWKIALRCFSYGVPSFLLVVSLVAWVTFWEAESGFVSASVVTTISMAVTLFWFGRTDRKWRGFL 196
BLAST of mRNA_H-akashiwo_Contig1149.10.1 vs. uniprot
Match: A0A836C9P0_9STRA (Calcium release-activated calcium channel protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9P0_9STRA) HSP 1 Score: 162 bits (409), Expect = 3.280e-46 Identity = 82/199 (41.21%), Postives = 127/199 (63.82%), Query Frame = 1
Query: 4 EVADMAWEVKCREEDLRHRAVENERRR-------IDDAXXAVDEKSQQLKAVSHLSALVAGFAMVSMVELNIPPDLNDVLLVTFGTTAGLVVACCLFAMLNCTLMLVAICKYDCKIRE----VPFEDFWRKRCLSDWTVSFRAFNVGLTLFLALLAQMGWVTFHSHPSRNVAASFITVIAATTTGIWLVHIKGKWGDFI 567
+VADMAW +KCREEDL +R +E E R+ +D+ A++EK++QL+ ++ LSAL+AGFA+V+M ++ IP +N LLV+FGT V L AML+ TL+LVA+ KYD K+ F FW C +DW +SFR FN+ + LFL +L Q+GW+ F +H + +++ +TV+A + ++ ++ KW F+
Sbjct: 1 QVADMAWGMKCREEDLEYRRLEMEWRKHDLWCRWVDEQWHAMEEKAKQLEQIAQLSALLAGFALVAMCQMQIPDGVNGWLLVSFGTVTAAAVGVPLIAMLSSTLVLVAVIKYDPKVAVNAACPDFGTFWSTHCEADWRLSFRCFNISIALFLMVLGQVGWIQFFAHQNYVASSTLVTVVAVASAMVYFLYTYRKWSTFL 199
BLAST of mRNA_H-akashiwo_Contig1149.10.1 vs. uniprot
Match: A0A7S2CAC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CAC6_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.050e-36 Identity = 62/118 (52.54%), Postives = 81/118 (68.64%), Query Frame = 1
Query: 223 LVTFGTTAGLVVACCLFAMLNCTLMLVAICKYDCKIREVPFEDFWRKRCLSDWTVSFRAFNVGLTLFLALLAQMGWVTFHSHP--SRNVAASFITVIAATTTGIWLVHIKGKWGDFIK 570
L+ FGTT+ LVV L AMLNCT+ML+AI KYDC R PF FWR C DW ++R+F GL LF+ +LAQ+GW+ FH + +RN+ AS IT +AA T +W +H K KWG+FI+
Sbjct: 1 LMLFGTTSALVVGLMLIAMLNCTMMLIAILKYDCVNRNPPFHTFWRVHCEDDWHFAYRSFTFGLPLFMCVLAQIGWIQFHKYDDSTRNLGASAITFVAAVTFSLWFLHTKSKWGNFIR 118
BLAST of mRNA_H-akashiwo_Contig1149.10.1 vs. uniprot
Match: A0A2R5G3Z6_9STRA (Calcium release-activated calcium channel protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G3Z6_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.240e-30 Identity = 87/252 (34.52%), Postives = 137/252 (54.37%), Query Frame = 1
Query: 1 LEVADMAWEVKCREEDLRHRAVENERRRIDDAXXAVDEKSQQLKAVSHLSALVAGFAMVSMVELNIPP-DLNDVLLVTFGTTAGLVVACCLFAMLNCTLMLVAICK-YDCKIREVPFEDFWRKRCLSDWTVSFRAFNVGLTLFLALLAQMGWVTFHSHPSRNVAASFITVIAATTTGIWL-VHIKGKWGDFIKKDRS-SLFHHHSTAADSSVHFQHQQQHHVAGAHADEFKEQGALR*ISSTKSPEDHSHML 744
L +AD+ K REE++++R +E RR+I DEK +QL+++++L+AL+AGF++V ++ELNIP D+ VL+ + + + V + + CTLMLV + K +D + ++PF+ FW RC DW +F F +G+ +F+ LA GWV F + A ITVI A WL +H+K WG ++ + + ++ H S A+ ++ QHQ H H E GA S EDH L
Sbjct: 9 LALADVHLATKWREEEIKYRKLEILRRQI-------DEKVEQLRSIANLAALIAGFSVVVLIELNIPSNDVPAVLIGLWALSTAITVCIMSLSFVICTLMLVGVLKAFDLERAKMPFQQFWVLRCEEDWMRAFWFFTIGVPMFMLNLALAGWVLFFEYLP---IAGLITVICAVAIMYWLSIHLK--WGSYLAEQATFNVEHMPSEASQRRINSQHQGSHRGRTLH-----EAGAAASGSGRLQHEDHDDFL 243 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1149.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1149.10.1 >prot_H-akashiwo_Contig1149.10.1 ID=prot_H-akashiwo_Contig1149.10.1|Name=mRNA_H-akashiwo_Contig1149.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=229bp MAWEVKCREEDLRHRAVENERRRIDDARRAVDEKSQQLKAVSHLSALVAGback to top mRNA from alignment at H-akashiwo_Contig1149:334948..335700+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1149.10.1 ID=mRNA_H-akashiwo_Contig1149.10.1|Name=mRNA_H-akashiwo_Contig1149.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=753bp|location=Sequence derived from alignment at H-akashiwo_Contig1149:334948..335700+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1149:334948..335700+ >mRNA_H-akashiwo_Contig1149.10.1 ID=mRNA_H-akashiwo_Contig1149.10.1|Name=mRNA_H-akashiwo_Contig1149.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=687bp|location=Sequence derived from alignment at H-akashiwo_Contig1149:334948..335700+ (Heterosigma akashiwo CCMP452)back to top |