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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 197 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 195 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681387097.3573937-CDS-H-akashiwo_Contig1147:306458..306509 | 1681387097.3573937-CDS-H-akashiwo_Contig1147:306458..306509 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1147 306459..306509 + |
| 1681387097.3726325-CDS-H-akashiwo_Contig1147:313759..313903 | 1681387097.3726325-CDS-H-akashiwo_Contig1147:313759..313903 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1147 313760..313903 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1147.4.1 >prot_H-akashiwo_Contig1147.4.1 ID=prot_H-akashiwo_Contig1147.4.1|Name=mRNA_H-akashiwo_Contig1147.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=65bp
RRAGGVPGGAGHGGGASVNITSGSSVCGATAVTTFIEFYMPTSDVPLIEV
EDGYDVDSISLTEKT back to topmRNA from alignment at H-akashiwo_Contig1147:306459..313905+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig1147.4.1 ID=mRNA_H-akashiwo_Contig1147.4.1|Name=mRNA_H-akashiwo_Contig1147.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=7447bp|location=Sequence derived from alignment at H-akashiwo_Contig1147:306459..313905+ (Heterosigma akashiwo CCMP452)
CGCCGAGCTGGAGGGGTACCTGGAGGCGCTGGACACGGTGGAGGGGCGTC
TCCGCGAGGCCCCCCCTTCTTTCTTGCGTGCGGCCTGTTGCGTTGCCCCA
CGGACGCTCTGCTCGCTCGGTGCACCTCCCGCGGCGGTGGGGGGGCCCGT
CGGAGACCTGTGGGAGCGTCGTCGGCCGGGGTGGCGGCGGCTTGTGCGGG
CGGCGGGCGGTTTGGTGAGGCCTCCGCGGAACGCGCGGCTACACAGATGC
TTGCACGTACTGATGATGGGATTTTGACTCTTGGAGCCTGCGGTCGGTTG
GCCGGTGTTATGGGGTGTGCTTCCGTTAGGATGTGACTAAAGAACTGACT
TAAAAGCACACACACACACACACACACACATCCACAACATAGGCACTTCA
CCCCAGCGCAATTGTTTCACGAGGAGGTCGGCAAGTTTCGATTTCCCCGT
GAAACTTTCCAGGATAAACGATCATCTCTGGGGATCACCGTACTACAGCC
TCTCATATTTGATGGCGCTTCGCCTTCTAAATAACGCTAAATTGATTTTT
TACACTGCAGTACTACGAATTGGTGGTAGCCTTAAAGAAGAAGAAGAAAA
TGAGTTTTTATATTCTTTTCTGATTCATAGAAATCACTAAAAAAAAAGTT
TTGGAACACGACTGATTGGGCGAGCTTCTTCTTCTTCCCCACTGCCTACC
ACCACCACGAAGAGGAAGAAGAATTCAGTCTCTGTCTCTCACCACGAAAG
TTTAGTGCCGGATCTTGCTCGCCGTACGTTTCTGCTGGTATAGCCAAAGT
GCATAGAAAACCAGAACATAAACCAGCAGAAAGAGTAGCAAGAGCACAGG
CTGGAGGACAGGGAAACTTTCCAAGCATTTTCCTCCTTCTTTTTTATGGT
TCTTCTCGGAGGGGAAGTGCACAAATCTGCTTGAAACGACCAGTCAAAGG
GTCTAATCGAAGTGGGCTTTTGAGCTCTAGAAGCCGAGATATTGATGCGC
AAGTCTATGGACTTACGAAGCGACAGGAAGTGGCCCGTTTGCGGTGCCCG
ATCTGAAATAATTGACACTGCAGGAGAAAAGTTTCGTTTGGCGTGCATCA
ATAATGCGATTCCGCGCGGTACTCGTTAGCGCTCCGCGCAGCCTCCATGC
GGGACTCGAACCCGCGGGAGAAGCGTCCAAAAAAGCTAGGTAAGAACTCT
AGCCGCTTAGACTGTTTCCGACTGTGCGACAGTAAAAGATTTAAAACATA
AGAACTTCAATTAAAAATTCTAAGACTTCGTCATTTTCGCACCGGACCCT
AAATGCCCTCTTCCCCTTGAACAGAGCTTTCTAACCATGTGCTTTTTACT
GGAATCCGAGCGAAATAGCGAAGTTATCTTTCGGACAACCGCATGCCCTT
GAGCATCCAGGATTTTGGTCCCCGCTTCGTGCCGCAAAAGCGAGATTTTT
CACCTGGGGTGTGAGGTAGGGTGCTTATTATTATTATTCGTGATTTTTTT
TTTCTACTTTTGTTTCACATATAATGCGGTCCTCTCGCATCCTGAGCCAC
AAGTACTGTCTTCTTGCAGGTGCCATTGCATCTGATAGCACTCTGTCGGA
CAATGTCACGCTATTACTGACCGGCCGAAGTCCCAGCTGCGCAAAGCCCT
GCGTACTCCGCTGCCCTTTGGCCCAGGCCCAGTCTTCGAGTGTCTCTTCC
ATTAGCGCTGCCCCCGACAATCCATATCCATGACTGGTGCATTTATTTCC
TCCCTACGAGTCGAGATGGTTCCGGTAGACATCGTCAATCCACCTCTGGT
TGCAAAGCACCAGGTGCTTTTCTCCATGTATGCCCTTTTATGACCTTTAG
GATTCAAGAAACTTTCCGACCAGCTTTCGGACACTGGCTGCCTGCTTGTT
TTTCAACGCTGACGGTTACGGAAGGTACTGCCAACGTCTTCACGCTCCAC
GAGGACGATTCCGTGAAATACCCCTGAATGTTATCAATCATGATCAGCAC
ACCCAGGGTAGGTCTCCTTACCAACCCGAACAACGCTGAGAAACCTACCT
GGATAATTCCAAAGAATGTTTCCAGGAAAATTCCTCACCATGACCGCCAG
AAACGTGAAGAAGACACAAACGCTGAACATCATCAGTGGGAGTGTCGTCT
CTACTATTTTGCACCCTATGTATAGTTCGTTACGTTCATTAACTTTGAGT
AGAAAGACCTGATGAGCTCTAAGAGTTTCAAGATTCCGTGAGTATTCTCC
GATGCAGCATCTCCCGAAACACATGCAATGATGTAATTATTCTTGATAAC
AGTACTCTTTGACTTTCAAAACCAACTGGGTACTGACCTATCAGGGTCTA
TGACTTACAAGTGTTCTGAGAAACTCATTCCTTTTTGTTCACATTCTTCC
TTTCTATGATCACATTCTCCCAGCGTCATACTGCTGAGCTCAGCGTGACA
AATATACCCTGACATTGGTTCAATACTTTGGTCATGTCAAAAGTGACTTG
GCTTACATCTTTTTTGGTCTCCTGCACTGCTGCCTCAATCATGATGAAAT
ACATAGTGGTGCTGCTGAAGAACGAAGGGCTTGAGACTGGTCGCATACTT
TTTATTATCATTGTTGTGCCTAAAACAACTCCAAAGGCATACATATGACG
ACGAGTGCAAAACAACAGTAGTTTATTATTGGGGTTTATTTTTCATTATT
GCTTAATAGCTATTTGCACCCCGTGGGGACAAAAAAGAGAAAGTTTGACT
CCCGCGGTCAATCCTCAGCCTCTTAAAAGACAACTGCACACACATGGACG
ATAATGGGTATACAGGTAGCAACAGTTACAACAAGTAATTTTTGTCACTT
AAATGCTAAAACGTGAAAAAAAAAAAAAAAGGGTACCAGAGGGTAAgGGA
GGCAAATTTTCCTGTCCCCGAGGGGTAGCAATGCTGTTTTTGATCCAAGG
GGATACAAACAAAATACCTGTTTTTACAATCTAGTTTGGTCACTACGATA
AGACCGAACTTTCACGAGAGTCTTTGCTGTGCTCAAGTTGGGGCTTTGAA
ACTTCAAAACTCGTGGCGCTTATATATATACTGTAGCCATGTGTTTCAAC
CACTAAAATTGGCAACGATCAAGGCAGGTAAATATATATATAAAAAAACG
GATACTAATCAGTATCAGTCGCCTAGGTAAGCAGGTAGTTTTGAAATGAT
TTGTATACTAATCAGTATCACTCGCCGAGGTATGAGGTAGTTTTGTAATG
ATTCGGATGCTAATCAGTATCAGTCGACTAGATAGAGGTCGTCTACCTTA
TATAGCTTGGGGATGATGGATAAAGCAAACTCAATACCAGTAGGGACTCT
TAAAGTCGGGCCAATTCAAAATAAAGATTTTCCTCCCGAAAGTACGCACA
AATGAAATTTTAAAATTTGACACCTGAATACAAACCTGTAATGATTTCGA
TACTAATCAGTATCACTCGCCTAGGTATCAGGTAATTTTGTAATGATTCG
GATGCTAATCAGTATCAGTCGCCTAGATAGAGGTCGTCTAGCTTTTGCTT
GGGTTTGATGGATGAAGAAAATTCGATACGAGTAGGGACGCTTAAAGTTG
GGTCAATTCAAAATAAAGATGTTCCTCCCGAAAGTACGCACAAATGAAAA
TTTAAGGAGGCTTGTCCAAGGGGTGTTTACACAAATTTTTATTAGTTACA
CTAATTGTTATATAACTTCTGAAAGAATGACTCTAACGCTGTACTTTTTT
TTTAGCAGATAGCTCATGCAATGGGGAGATGTTTTGTTCAAAAAAAAGAA
TTGAAAAGAGATTTTAAGCCTGCTTTGTGGGGTGTTGACAATTGGATTTT
AAAAATGGGTTTTTGGACATTCTGAGAAAACCAACAGAAGCTAGTGCACC
AACATTTGAGGCTGAGCCGAGCTGACCTTGCTGCACCTGTTGCCAAATTT
TCATCCACATTCTCCAACAAAAACTATATTATCATTTTCAAAGTTTTTCA
GCCAAAATTTTATATATATTTTTGCTGATAGATTTGTATTTGCATATTGG
ACCTAAGGGGTTGTCTGGTCTCTCTTGGCAGTACATCCTGTTATGTATCA
ACATATGGGTATACAAAAATTGTGCTTGTTTACAATTCGTGTATGTTTAC
ATTGTTTGCGAAAAGTAGCCTTACACGATTCGAAAAGTGTACTTAGTCCG
GCACACAATTGAGCGACTATTCCGCAAATGTAACCCTATTTCATTGTCCC
CTTTTACCTCTTCAATTGTCCGATTTTGGGAAATCTTCAAATGTCCAATT
TTTCAATCAGGGGCTTCCGTAAGTGTCCGCTCGATTTTCAGGGGTCTGCG
TAAATGTCCGATTTGGTTGCGTAAGTGTCCTGTGTCAACTAGTCGCTCAA
TTGTGTGCCGGACTAAGTACACAAATTTAGTTTGTGTAACACAAATTAGA
AGTTGGTGCTTGTCCCTGATTGGCTGAAATCGGCAATCAAATTTGGTTGT
TGTGCGGGCGTGATCGGAGTGATCGGTTTGTTCTGTTTTATGTTACAGTG
CTGAAATAAAATCGCTAAAAATATATTGTTGCATATATAAACTCGGTAAC
TTTGGATTTTCATAGATTTGAGATATTTCTATTCATACTTCTGCTTTGGA
GGGTGCTGCACAACGCTCACCACACCTCCACCCACTCCAGCTGTCCTTCT
TCTGTCCTGTCAAGTACCTGTGCCCCTCCTTCCCCCCAACTTCTGCCCAG
TGCCCCCCTTCCCCTCACGGCTCCACCGCCCCCTCCTCGACCTCCAAGCT
GCCTTGCTCCCTTAGTCGCCTTGTTGGCCTCTGTGTCCCGGCGCTCCTTG
GCTGCTCTAGCTATTTCCTGTTGAAGTACACGGTCCCCCTCCGCCTTTTT
CTCCACCCGTGCCCTTTCCGTTTCTTTCTGCTTATTATTGTGTTTTGCAA
TTCGATGGCGAGCCCCCCAAGCAAGTGCTGGCTCAAAATCATGATCCCCT
TTCTTCTCCTGGAAGTCATCTTCCGATGCTAGCCATTCAGCCCTCCTCCC
TTGGGTTGCCACGCTGCTCTCATAACTTGAACTCTCCCCAGAGCTGCTGG
AGTCAGTATCATCTTCACTACTCAACGGTTCCGCCTCGTCACCGCCATGT
GTGACGACTCTGGCGAAGAGCAGCTTTCCAGTGGCCTTGTCTTCAATAGT
TGCTCAACTTGTAGTGTAAAAGGAGCAGAAACGAGATGCATGACGACAGA
AGCTGCCAGCCCCCTGGCTCCTCGCTCACTGATTGGGCCACCTGATATTT
CTTGTGTTGGCTCTTGGCCAATTGGCACCCCCCCCGCGCCCCCCTTGTAA
TGATGGCTTTTCCCGGCTTCCGGAAATTTCCCCTTTTTACACTTGGCCGT
CTCCTCCACCAATCGGTGTTATCGCGCTATGGTTGGTACCATGAGGTTGT
AGATTCAAATCCCGGCCTTCTGTTTTACTGCAAATAACACGTAATTCAGC
ACTGTGGCGCTCTTTGGCTCATTCCGAAGTATCTCCCTTAGGTGGACATG
ATCTGTCGGACTGGGAGTATGGGGGAAATAATGCTGTACGAGTACCATGC
GCGAATTCTGAGTTGACGCTAATAATCATAGCAGCATAGTTGTATCACAC
TATGGTTGGTACCATGAGGTTGTGGATTCAAATCCTGGTCTTCTGTTTTA
GCGCAAACAATAATCGGAAGCCCCTGCGGTATAAATTCTACATTGTGGAG
AATGATTCTTTCCCCCCGGAGCACAACATTAGAGAGCTCCTGTGCCTCTC
CTTGTTGCTCAACCCTGACGATCGCCTGTTCCTCCTGCGCATGCCTTTGT
TCCTCTTGTTGCTTCTCTCCCTGCTGCCGTTGGTCCTTGTCCCTTCCACC
GCCCTATACTGCTACTGCTGCTGCTATTGTGCTGCTGCTGCAGGAGCGAT
AGGTGTGTTGTGGTGATGCTGCCCTGCATGGACACAATGTGTCGGACTGG
GAGTACGGGGGAAACGTTGCTGTACAAGTATCATGCGCTAATTCTGAGTT
ATGCTAACAGTCATAGCAGTATAGTTGTATCGCGCCATGGTTGGTACAAT
GAGGTTGTGGATTCAAATCCCGGCCTTCTGTTTTAGCAGAAACAATAATC
GGAAGCCCCTGCGGTATAAATTCTACATTGTGGAGAATGATTCTTTCCCC
CCGGAGCACAACATTAGAGAGCTCCTGTGCCTCTCCTTGTTGCTCAACCC
TGACGATCGCCTGTTCCTCCTGCGCATGCCTTTGTTCCTCTTGTTGCTTC
TCTCCCTGCTGCCGTTGGTCCTTGTCCCTTCCACCGCCCTATACTGCTAC
TGCTGCTGCTATTGTGCTGCTGCTGCAGGAGCGATAGGTGTGTTGTGGTG
ATGCTGCCCAGCAGACGGCGAAGACTGTCGTGCCCTAGATGGCTTGGCCC
TTCCCTGGCGAAGCCTTTGGCAAAACTCCCTGCCTCCCAGCATGCGCCCA
TTGCGATCCCTAGCCTCGATATTCCCTGGAATCATCGTGACACCCTCAGA
CTGCGGCGGGCGACTATGACCCATCCTTGAATTTCCCTGCCTGCTGCCCA
TGCCTGAAGTGTGAAAAGCCCTTTGGCTTGCCTGCACAAGCGGCCCTGAG
ACCCTCCACGCCGAACCTCTGCTGCCACAGACGAAACCTCCCGAGAACTG
TCATGCTGATATCCCCATCCTAACCACCCACCCAGCCCCCTCATTCCCAT
TTCTCCCTCAATCCATGCCTCACTTTTGTCCACCAAAACATACGTCCAAG
GCAACTTCGAAGTATTGACCGGATGCCAGTGATTGAGCGTGCACACCTGT
AGACTAGGGCAGTCCCTTCCTTGAGCGTCGTGCTGGCACTTCACAACGCA
CCCTGGCCGACTCTCGGACCCTGTACATGTGCACACACCCTTGGCCAAAT
TGGCCATGCTGCTGACACTTCGTGGCCTCGTTTAATTTACAGTTGTGCAC
CCCCTTGGATTGCGGTCCATTGACCGGGACCATTCTAATCATATATTAAT
ATCTTCCCCAGAATTGCTTCTGAAAATCCTAGAAATGCATTTTGAGGGTG
GCATATATGTGTATACTTGGGCTGAAACAGTTATATCCACACCAGATCAA
AAACAATTGTTGTGTAAGCCTTTGCTGTGGATTTTCTCTCATTATAGTCA
GGCATTAAATTTAAACATGGTATATAGTAAAAGAGCACTAGTCCCCCACC
CACATCAGTTGTGTAAGCAACACTGCCCTCAACCAATGTCATTGAAATCA
GGTAAACATCACGTCAGGCAGTTCAGTCTGCGGTGCTACAGCTGTCACCA
CCTTTATTGAGTTTTACATGCCAACCTCTGATGTTCCTCTAATCGAGGTT
GAAGATGGGTACGACGTGGACAGTATCAGCCTTACCGAAAAGACTAA back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig1147:306459..313905+ >mRNA_H-akashiwo_Contig1147.4.1 ID=mRNA_H-akashiwo_Contig1147.4.1|Name=mRNA_H-akashiwo_Contig1147.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=195bp|location=Sequence derived from alignment at H-akashiwo_Contig1147:306459..313905+ (Heterosigma akashiwo CCMP452)
CGCCGAGCTGGAGGGGTACCTGGAGGCGCTGGACACGGTGGAGGGGCGTC
TGTAAACATCACGTCAGGCAGTTCAGTCTGCGGTGCTACAGCTGTCACCA
CCTTTATTGAGTTTTACATGCCAACCTCTGATGTTCCTCTAATCGAGGTT
GAAGATGGGTACGACGTGGACAGTATCAGCCTTACCGAAAAGACT back to top
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