mRNA_H-akashiwo_Contig1147.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1147.3.1 vs. uniprot
Match: A0A2I1H447_9GLOM (Uncharacterized protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2I1H447_9GLOM) HSP 1 Score: 99.0 bits (245), Expect = 3.340e-21 Identity = 58/198 (29.29%), Postives = 96/198 (48.48%), Query Frame = 1
Query: 1 SSMAAIRKVIEEEQDGLGTRFRQSVQPVIDNLSDRAMKISWKGEPMRKYSNVSEGDLHTLFQYIKDIDPTMEVNFTTAKQWEAHPDWLDWLERHTCSSWYSFQVKKCNQSDC--CRPVRMDKEIFQSLDFLPEGELDHTGKHYLPFSKLYRQPQPDPVSLVPSQQKNFKDDRWKRSFAKKNVRGVIWCVDCGFPRSIY 588
+++ IR +E L + R SV+ V D LS+R ++ + + Y+ S ++ F+ I ID T++ T+ H + D+++ H YSFQ+KKC + C C P+R+ K+IF L F+P+ L +HY F LY + +PS ++ K+D N+R +I C C PR I+
Sbjct: 37 NTLEEIRNAAQENMK-LRLKLRNSVKAVQDLLSERTKRLKLNEKNFQIYNPASLINIDETFEIIHRIDSTLQQEETSINSLNKHYELQDFIKSHYQIRTYSFQIKKCGEEGCKFCLPIRLPKDIFDELKFIPDPMLSTDLEHYKDFDDLYGT---ETKEFLPSASESTKEDIPSGIINNSNIRKLINCTICNKPRCIF 230
BLAST of mRNA_H-akashiwo_Contig1147.3.1 vs. uniprot
Match: UPI001C16FD5E (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C16FD5E) HSP 1 Score: 96.3 bits (238), Expect = 2.630e-20 Identity = 53/182 (29.12%), Postives = 88/182 (48.35%), Query Frame = 1
Query: 49 LGTRFRQSVQPVIDNLSDRAMKISWKGEPMRKYSNVSEGDLHTLFQYIKDIDPTMEVNFTTAKQWEAHPDWLDWLERHTCSSWYSFQVKKCNQSDC--CRPVRMDKEIFQSLDFLPEGELDHTGKHYLPFSKLYRQPQPDPVSLVPSQQKNFKDDRWKRSFAKKNVRGVIWCVDCGFPRSIY 588
L + R+SV+ V L +R + +S + + + + LF+ I ID T+E++ T+ H D+++ H C YSFQ+KKC + +C C P+R+ KEIF L F+P+ + +HY F+ LY + +PS + K+ VR ++C C PR I+
Sbjct: 28 LAIQLRKSVEEVQSLLKERTIWLSHNEKSFQHHKPAYRMQIDELFEKIYKIDETLELHETSLNALSKHGILQDFIKTHCCIRTYSFQIKKCGKLECNFCLPIRLPKEIFSELHFIPDPIISIDSQHYRDFNDLYGT---ETKEHLPSLSNSSKETIPTGLINNNRVRDFVFCTYCNKPRCIF 206
BLAST of mRNA_H-akashiwo_Contig1147.3.1 vs. uniprot
Match: A0A8H3L2B8_9GLOM (Uncharacterized protein n=3 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3L2B8_9GLOM) HSP 1 Score: 92.4 bits (228), Expect = 3.150e-18 Identity = 49/150 (32.67%), Postives = 80/150 (53.33%), Query Frame = 1
Query: 1 SSMAAIRKVIEEEQDGLGTRFRQSVQPVIDNLSDRAMKISWKGEPMRKYSNVSEGDLHTLFQYIKDIDPTMEVNFTTAKQWEAHPDWLDWLERHTCSSWYSFQVKKCNQSDC--CRPVRMDKEIFQSLDFLPEGELDHTGKHYLPFSKLY 444
+++ IR V +E + LG R S++ V + LS+R ++ + + Y+ VS ++ F+ I ID T++ T+ H + ++++ H YSFQ+KKC +C C P+R+ KEIF L F+P+ L KHY F KLY
Sbjct: 771 NTLEEIRSVAQENKK-LGLELRNSIKVVQELLSERTKRLKINKKKFQIYTPVSLINIDETFETIHHIDSTLQQEETSMNSLNKHQELQNFMKSHCQIRTYSFQIKKCGDDECKFCLPIRLPKEIFDELKFIPDPMLSTDLKHYQDFDKLY 919
BLAST of mRNA_H-akashiwo_Contig1147.3.1 vs. uniprot
Match: UPI001E1D28F7 (uncharacterized protein LOC123545380 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D28F7) HSP 1 Score: 87.0 bits (214), Expect = 2.920e-17 Identity = 39/140 (27.86%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 4 SMAAIRKVIEEEQDGLGTRFRQSVQPVIDNLSDRAMKISWKGEPMRKYSNVSEGDLHTLFQYIKDIDPTMEVNFTTAKQWEAHPDWLDWLERHTCSSWYSFQVKKCNQSDCCRPVRMDKEIFQSLDFLPEGELDHTGKHY 423
SMA +R++ ++ + + T++++S++PV + +R +++ K E + ++ D+ + ++++D+ PT++ + P++ DW+ RH S Y FQ+KKC +DCC P + + +LP+ LD TG HY
Sbjct: 51 SMAQLREMAAKKSE-VKTQWQESIEPVQSTIRNRFLRLKLKDERFQAVDPMTYEDIDVIKRHLRDLFPTLDTDKLQKVHTSKVPEYADWMSRHCRQSHYIFQIKKCEDADCCIPG-------EDMPWLPDPMLDETGDHY 182
BLAST of mRNA_H-akashiwo_Contig1147.3.1 vs. uniprot
Match: A0A8B8BNT9_CRAVI (uncharacterized protein LOC111112012 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8BNT9_CRAVI) HSP 1 Score: 84.7 bits (208), Expect = 1.420e-15 Identity = 54/192 (28.12%), Postives = 89/192 (46.35%), Query Frame = 1
Query: 49 LGTRFRQSVQPVIDNLSDRAMKISWKGEPMRKYSNVSEGDLHTLFQYIKDIDPTMEVNFTTAKQWEAHPDWLDWLERHTCSSWYSFQVKKCNQSDC----CRPVRMDKEIFQSLDFLPEGELDHTGKHYLPFSKLYRQPQPD---PVSLVPSQQKNFKDDRWKRSFAKKNVRGVIWCVDCGFPRSIYFDKKI 603
L + Q+V +D L R ++ WKGE + S +++ L + +K +D ++ N + D +LE H+ S Y FQ+KKC +C P R+ +++F+SL F+P+ D G+ Y F LY D P + +D ++K VRG + C +CG R IY +K+
Sbjct: 595 LKEEYTQAVGASLDILKQRFKRLRWKGENVCVQEAASPEEMNALVELLKVLDENIQCNANLSNLQSKAID--AFLESHSRSRQYIFQIKKCLADNCGYCVLNPPRLPEDVFRSLHFVPDPTKDENGQ-YKCFKDLYGTETNDKERPSLQGKPVDSSERDKKFKAVLVGTKVRGFVLCTECGKRRVIYAVRKL 783
BLAST of mRNA_H-akashiwo_Contig1147.3.1 vs. uniprot
Match: UPI00148A3ECA (uncharacterized protein LOC117689802 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A3ECA) HSP 1 Score: 83.2 bits (204), Expect = 4.890e-15 Identity = 65/213 (30.52%), Postives = 95/213 (44.60%), Query Frame = 1
Query: 1 SSMAAIRKVIEEEQDGLGTRFRQSVQPVIDNLSDRAMKISWKGEPMRKYSNVSEGDLH---TLFQYIKDIDPTMEVNFTTAKQWEA---HPDWLDWLERHTCSSWYSFQVKKCNQSDC----CRPVRMDKEIFQSLDFLPEGELDHTGKHYLPFSKLYRQPQPDP--VSLVPSQQKNFKDDRWKRSFAKKNVRGVIWCVDCGFPRSIYFDKKI 603
S+M A R+ I Q + QSV+PVI N+ R ++ ++ E +R + + ++ +L +DID V K + P ++ERHT S YSFQVKKC DC P R+D E F+ L +LP+ L Y PF ++Y D SL S Q +D + R + C +CG R IY K+
Sbjct: 639 STMKA-RRDIALRQGDMKDALIQSVEPVITNVKARFGRLKYQEEGVRIHDAAKDEEIDAICSLIDLFRDIDKPEPVTLNDVKNRNSLKKFPMLQQFVERHTRSRQYSFQVKKCKADDCFFCAINPHRLDDEKFEDLHWLPDPVLSEDAC-YKPFEEVYGTDTKDNDRPSLKDSCQPTERDKKHHGLLNAAAARSFMICYECGKRRVIYCKTKL 849
BLAST of mRNA_H-akashiwo_Contig1147.3.1 vs. uniprot
Match: A0A2P4Q7C3_RHIID (Uncharacterized protein n=6 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2P4Q7C3_RHIID) HSP 1 Score: 79.7 bits (195), Expect = 3.470e-14 Identity = 46/185 (24.86%), Postives = 86/185 (46.49%), Query Frame = 1
Query: 49 LGTRFRQSVQPVIDNLSDRAMKISWKGEPMRKYSNVSEGDLHTLFQYIKD-IDPTMEVNFTTAKQWEAHPDWLDWLERHTCSSWYSFQVKKCNQSDC--CRPVRMDKEIFQSLDFLPEGELDHTGKHYLPFSKLYRQPQPDPVSLVPSQQKNFKDDRWKRS--FAKKNVRGVIWCVDCGFPRSIY 588
L + +++ L R ++ K + + + +++ LF+ + + ID T+ N T+ + D +++ H YSFQ+KKC +SDC C PVR+ EIF L ++P+ ++ HY F LY Q + +PS++ + + S VR ++C+ C R ++
Sbjct: 45 LSEELKMAIKNTQKTLETRTERLKLKNQKFKCIEPAALEEINGLFEILGEKIDNTVTQNGTSQNKLRTCVDLQKFIKSHCLIQEYSFQIKKCGESDCLICDPVRLTHEIFNQLHYIPDPQISSNPDHYQDFDSLYGQNTTE--KDIPSKKNHHECKELAPSGILVAARVRDFVFCISCSKLRCLF 227
BLAST of mRNA_H-akashiwo_Contig1147.3.1 vs. uniprot
Match: A0A2I1FH25_9GLOM (Uncharacterized protein (Fragment) n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2I1FH25_9GLOM) HSP 1 Score: 79.3 bits (194), Expect = 9.010e-14 Identity = 46/185 (24.86%), Postives = 86/185 (46.49%), Query Frame = 1
Query: 49 LGTRFRQSVQPVIDNLSDRAMKISWKGEPMRKYSNVSEGDLHTLFQYIKD-IDPTMEVNFTTAKQWEAHPDWLDWLERHTCSSWYSFQVKKCNQSDC--CRPVRMDKEIFQSLDFLPEGELDHTGKHYLPFSKLYRQPQPDPVSLVPSQQKNFKDDRWKRS--FAKKNVRGVIWCVDCGFPRSIY 588
L + +++ L R ++ K + + + +++ LF+ + + ID T+ N T+ + D +++ H YSFQ+KKC +SDC C PVR+ EIF L ++P+ ++ HY F LY Q + +PS++ + + S VR ++C+ C R ++
Sbjct: 235 LSEELKMAIKNTQKTLETRTERLKLKNQKFKCIEPAALEEINGLFEILGEKIDNTVTQNGTSQNKLRTCVDLQKFIKSHCLIREYSFQIKKCGESDCLICDPVRLPHEIFNQLHYIPDPQISSNPDHYQDFDSLYGQNTTE--KDIPSKKNHHECKELAPSGILVAARVRDFVFCISCSKLRCLF 417
BLAST of mRNA_H-akashiwo_Contig1147.3.1 vs. uniprot
Match: U9SWQ3_RHIID (Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=U9SWQ3_RHIID) HSP 1 Score: 79.0 bits (193), Expect = 1.400e-13 Identity = 46/185 (24.86%), Postives = 86/185 (46.49%), Query Frame = 1
Query: 49 LGTRFRQSVQPVIDNLSDRAMKISWKGEPMRKYSNVSEGDLHTLFQYIKD-IDPTMEVNFTTAKQWEAHPDWLDWLERHTCSSWYSFQVKKCNQSDC--CRPVRMDKEIFQSLDFLPEGELDHTGKHYLPFSKLYRQPQPDPVSLVPSQQKNFKDDRWKRS--FAKKNVRGVIWCVDCGFPRSIY 588
L + +++ L R ++ K + + + +++ LF+ + + ID T+ N T+ + D +++ H YSFQ+KKC +SDC C PVR+ EIF L ++P+ ++ HY F LY Q + +PS++ + + S VR ++C+ C R ++
Sbjct: 612 LSEELKMAIKNTQKTLKIRTERLKLKNQKFKCIEPAALEEINGLFEILGEKIDNTVTQNGTSQNKLRTCVDLQKFIKSHCLIQEYSFQIKKCGESDCLICDPVRLTHEIFNQLHYIPDPQISSNPDHYQDFDSLYGQNTTE--KDIPSKKNHHECKELAPSGILVAARVRDFVFCISCSKLRCLF 794
BLAST of mRNA_H-akashiwo_Contig1147.3.1 vs. uniprot
Match: A0A6J8CXL1_MYTCO (Uncharacterized protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8CXL1_MYTCO) HSP 1 Score: 76.6 bits (187), Expect = 4.040e-13 Identity = 39/170 (22.94%), Postives = 97/170 (57.06%), Query Frame = 1
Query: 4 SMAAIRKVIEEEQDGLGTRFRQSVQPVIDNLSDRAMKISWKGEPMRKYSNVSEGDLHTLFQYIKDIDPTMEVNFTTAKQWEAHPDWLDWLERHTCSSWYSFQVKKCNQSDCCRPVRMDKEIFQSLDFLPEGELDHTGK-HYLPFSKLYRQPQPDPVSLVPSQQKNFKDDR 510
SMA++R + E++QD + ++ + ++PV + +R +++S K +PM+ ++ ++ + +++++ P + + + ++ W+E+H+ Y+FQ++KC+ ++CC P + +E +L +LP+ ++ T + HYL + ++ Q + + Q+K+ K D+
Sbjct: 82 SMASLRTLCEKKQD-IKQKWIELIEPVQSTVRNRFLRLSLKEKPMQAIDPIAIDEIDIIQRHLREHFPDLNLQKLQKVHTKKCQSYIQWIEKHSRQRHYTFQLRKCDDANCCIPSTLGRE---NLMWLPDPVVNTTDQDHYLQYEEVKHQETEEDRPSMKIQKKSKKTDQ 247 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1147.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1147.3.1 >prot_H-akashiwo_Contig1147.3.1 ID=prot_H-akashiwo_Contig1147.3.1|Name=mRNA_H-akashiwo_Contig1147.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=199bp MAAIRKVIEEEQDGLGTRFRQSVQPVIDNLSDRAMKISWKGEPMRKYSNVback to top mRNA from alignment at H-akashiwo_Contig1147:245632..246234- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1147.3.1 ID=mRNA_H-akashiwo_Contig1147.3.1|Name=mRNA_H-akashiwo_Contig1147.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=603bp|location=Sequence derived from alignment at H-akashiwo_Contig1147:245632..246234- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1147:245632..246234- >mRNA_H-akashiwo_Contig1147.3.1 ID=mRNA_H-akashiwo_Contig1147.3.1|Name=mRNA_H-akashiwo_Contig1147.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=597bp|location=Sequence derived from alignment at H-akashiwo_Contig1147:245632..246234- (Heterosigma akashiwo CCMP452)back to top |