mRNA_H-akashiwo_Contig1145.9.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1145.9.1
Unique NamemRNA_H-akashiwo_Contig1145.9.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig1145.9.1 vs. uniprot
Match: A0A7S2UVS4_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVS4_9STRA)

HSP 1 Score: 244 bits (623), Expect = 1.900e-76
Identity = 134/267 (50.19%), Postives = 176/267 (65.92%), Query Frame = 2 
Query:   32 SSVLSPVSQKGCARRLCMNG-DIEWTSVKVVENTAAAEGSKSIIIQPSSTIADSYVNPGQYVQMKT-GDGKPGFYAIANAPGRG-KDGSFEFLVKETDSNGWLTNAQPGAQLDMSAALGKGFAIDEHFEGFKYDFPLQHIFMFAAGSGIAPIRAALESDTLKIEGG---RTATLYYGARNAAQMAYAEKFDAWQERGVNIVPVLSQPEAR--VGRAPRYVQDALKEDLVP-PSNCGVLLCGMKGMVEDVKYVFTTAGAFEGRLLQNF 805
            +S L   +++ C  +L ++  DI W  VKV+EN  AAEG KSI++     I  SY NPGQYVQ++    GKPGFYAIANAP +    G+FEFL+KET+ N WLT A+ GA L+M+ A+GKG+AI E+F G+KYD+P  +I +FA GSGIAP+RAA+E+    ++G    +   LYYG +    +AY +KF+AW   GV IVPV+S+PE     GR   Y+QDALK D V  P N G ++CG K MVE VK     AG+FEGR L NF
Sbjct:   37 TSQLLQTARQSCRSQLKLSANDIAWNQVKVLENKKAAEGLKSIVLDVGD-IEKSYTNPGQYVQLRPDASGKPGFYAIANAPAKAVSKGAFEFLIKETEGNTWLTGAEDGAALEMTGAMGKGYAIQENFLGYKYDWPCINILLFACGSGIAPVRAAIENGLTVMKGSPLMKQCRLYYGVKTPDHLAYKDKFEAWAADGVEIVPVVSRPEGTGWTGRT-GYIQDALKADGVDIPRNSGAIMCGHKEMVESVKETMAEAGSFEGRFLLNF 301
[Close]
BLAST of mRNA_H-akashiwo_Contig1145.9.1 vs. uniprot
Match: A0A835YXH2_9STRA (NAD_binding_1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXH2_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.230e-69
Identity = 125/245 (51.02%), Postives = 162/245 (66.12%), Query Frame = 2 
Query:   92 DIEWTSVKVVENTAAAEGSKSIIIQPSSTIADSYVNPGQYVQMKTGDGKPGFYAIANAPGRGKDGSFEFLVKETDSNGWLTNAQPGAQLDMSAALGKGFAIDEHFEGFKYDFPLQHIFMFAAGSGIAPIRAALESDTLKIEG----GRTATLYYGARNAAQMAYAEKFDAWQERGVNIVPVLSQPEARV--GRAPRYVQDALKEDLVP-PSNCGVLLCGMKGMVEDVKYVFTTAGAFEGRLLQNF 805
            ++EW +  +V N  AA+G  S+ +  +  I+  Y  PGQYVQ+KTGD K GFYAIA+AP    DG FEFLVKETD+N WLT  + G  LDMSA +G GF I E F G+KYDFP+Q++ + A G+GIAPIRAA+ES  L+++     GR+ TLYYGA +  +MAY +K + W+ +G+ +VPV+S P A    GR   +VQ AL ED V  P N G LLCG K MV +VK +   AG F GR L NF
Sbjct:   64 EVEWKTASLVSNKKAADGLYSLTVD-AGEISTGYKMPGQYVQIKTGDEKAGFYAIASAPKT--DGMFEFLVKETDTNKWLTQMKSGT-LDMSAVMGNGFPIKEEFTGYKYDFPVQNVILVATGTGIAPIRAAIESGLLEVDTSGPFGRSCTLYYGAHSPERMAYQDKLEEWESKGMTVVPVMSAPAAGAWNGRT-GFVQKALGEDGVRVPRNTGALLCGQKEMVAEVKDILGGAGVFAGRQLLNF 303
[Close]
BLAST of mRNA_H-akashiwo_Contig1145.9.1 vs. uniprot
Match: A0A7S2PRN8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PRN8_9STRA)

HSP 1 Score: 222 bits (565), Expect = 2.160e-68
Identity = 117/223 (52.47%), Postives = 153/223 (68.61%), Query Frame = 2 
Query:  152 SIIIQPSSTIADSYVNPGQYVQMKT--GDGKPGFYAIANAPGRGKDGSFEFLVKETDSNGWLTNAQPGAQLDMSAALGKGFAIDEHFEGFKYDFPLQHIFMFAAGSGIAPIRAALESDTLKIEGGRTATLYYGARNAAQMAYAEKFDAWQERGVNIVPVLSQPEARVGRAPR--YVQDALKEDLVP-PSNCGVLLCGMKGMVEDVKYVFTTAGAFEGRLLQNF 805
            S+++      A +Y  PGQY Q+K    D KP F A+A+ P    +  +EFL+K T++NGW+ +A  G +LD+S  LG+GF + E+FEGFK+DFP Q + MFAAGSGIAPIRAA+ES  LKI  GR A LYYG R+  +MAYA++F  W++ GV +VPVLSQ EA + +  R  YVQ AL+ED VP P NCG L+CGMKGM E V  +   +G FEGR+L NF
Sbjct:   30 SVVLNVGDEKAPTYSIPGQYCQVKECIDDAKPAFLAVASPPSEDSN-QWEFLIKRTENNGWICDAAVGTKLDVSQILGQGFQMKENFEGFKFDFPTQQVLMFAAGSGIAPIRAAIESGQLKIGKGRGARLYYGCRSFNEMAYADRFQQWEQLGVQVVPVLSQ-EAELAQPFRGGYVQTALEEDGVPVPRNCGALICGMKGMAEGVTELLKKSGMFEGRILTNF 250
[Close]
BLAST of mRNA_H-akashiwo_Contig1145.9.1 vs. uniprot
Match: A0A1Z5J6M8_FISSO (NAD_binding_1 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6M8_FISSO)

HSP 1 Score: 221 bits (562), Expect = 3.440e-67
Identity = 123/240 (51.25%), Postives = 153/240 (63.75%), Query Frame = 2 
Query:  101 WTSVKVVENTAAAEGS---KSIIIQPSSTIADSYVNPGQYVQMKTGDG-KPGFYAIANAPGRGKDGSFEFLVKETDSNGWLTNAQPGAQLDMSAALGKGFAIDEHFEGFKYDFPLQHIFMFAAGSGIAPIRAALESDTLKIEGGRTATLYYGARNAAQMAYAEKFDAWQERGVNIVPVLSQPEARVGRAPRYVQDALKEDLVP-PSNCGVLLCGMKGMVEDVKYVFTTAGAFEGRLLQNF 805
            W+S  V  N AA +     K ++  P  T A+ Y NPGQYVQ++  D  KP F AIA+ P   ++  FEFL+K+T+ N W+T+   GA + +S  LG GF I+E+ EGFKYDFP Q++ +FAAGSGIAPI+AA ES  L I   R A LYYG R AA + Y E F  W++ G+ +VPVLSQP A       YVQ AL ED VP P N G LLCGMKGM E VK +   AG FEGR+L NF
Sbjct:   69 WSSASVKTNQAACQSGACVKILMDVPPETAAE-YKNPGQYVQVRLDDATKPLFLAIASPPDA-ENAVFEFLIKKTEGNEWMTSLSAGAAVQISQVLGNGFPIEENLEGFKYDFPTQNLLLFAAGSGIAPIKAAAESGKLNISEARKARLYYGERTAADLCYVELFSEWEKAGIQVVPVLSQPGADWEGRTGYVQAALAEDGVPVPRNSGALLCGMKGMSEAVKDLLQKAGVFEGRVLFNF 306
[Close]
BLAST of mRNA_H-akashiwo_Contig1145.9.1 vs. uniprot
Match: B7G998_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G998_PHATC)

HSP 1 Score: 216 bits (550), Expect = 3.840e-66
Identity = 120/244 (49.18%), Postives = 156/244 (63.93%), Query Frame = 2 
Query:  101 WTSVKVVENTAAAEGSKSII----IQPSSTIADSYVNPGQYVQMKTGDG-KPGFYAIANAPGRGKDGSFEFLVKETDSNGWLTNAQPGAQLDMSAALGKGFAIDEHFEGFKYDFPLQHIFMFAAGSGIAPIRAALESDTLKI--EGGRTATLYYGARNAAQMAYAEKFDAWQERGVNIVPVLSQPEARVGRAPR-YVQDALKEDLVP-PSNCGVLLCGMKGMVEDVKYVFTTAGAFEGRLLQNF 805
            W+  KV  N+ A E   S+     +QP +  A  Y  PGQYVQ++  D  KP F AIA+AP   ++ SFEFLVK+T+ N WLT+  PG  +++S  LG G++I E+ +  KYDFP Q+I +FAAGSG+API+AALES  LK+  +  R A LYYG R A  + Y +K+  W+  G  +VPVLSQP+  V +    Y+Q AL+ED V  P N G LLCGMKGM E VK   T AG FEGR+L NF
Sbjct:    9 WSPSKVTTNSKACESGNSVTLNVSVQPET--ASEYKLPGQYVQVRLDDSTKPLFLAIASAPDA-ENASFEFLVKKTEGNDWLTSIAPGTAVEVSQVLGNGYSIAENIDSLKYDFPTQNILLFAAGSGLAPIKAALESGQLKVGSDSSRQARLYYGERTAEDLCYVDKYSEWEAAGFEVVPVLSQPDESVWKGRTGYIQTALEEDGVDIPRNSGALLCGMKGMTEAVKDFLTKAGVFEGRVLFNF 249
[Close]
BLAST of mRNA_H-akashiwo_Contig1145.9.1 vs. uniprot
Match: A0A7R9UH97_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UH97_9STRA)

HSP 1 Score: 215 bits (548), Expect = 3.060e-65
Identity = 121/254 (47.64%), Postives = 156/254 (61.42%), Query Frame = 2 
Query:   83 MNGDIEWTSVKVVENTAAAEGSKSIIIQ---PSSTIADSYVNPGQYVQMKTGDG-KPGFYAIANAPGRGKDGSFEFLVKETDSNGWLTNAQPGAQLDMSAALGKGFAIDEHFEGF-KYDFPLQHIFMFAAGSGIAPIRAALESDTLKIEGGRTATLYYGARNAAQMAYAEKFDAWQERGVNIVPVLSQ-------PEARVGRAPRYVQDALKEDLVP-PSNCGVLLCGMKGMVEDVKYVFTTAGAFEGRLLQNF 805
            M  +  ++  KV+ENTA    S   I +      +  DSY  PGQY+QM+   G K GFYA+A+APG G +   E LVKE DSN WL  A  G  + ++A  G GF + E+F+   K+DFP+Q++ +FAAG+GIAPI+AA+ES  L++E GRT  LYYGAR+   M Y E+F+ W+E GV ++P  SQ       P AR G    YVQ AL+ED V  P N G LLCGMKGM E VK + T AG F  R L NF
Sbjct:   47 MQSEPAFSGAKVLENTAGVSASDVNIRKLRVDLGSAKDSYTTPGQYIQMRPSAGEKAGFYALASAPGSGSEA--ELLVKEADSNKWLIGANAGTSVQVTAPAGNGFKLAENFDDLVKFDFPVQNVLLFAAGTGIAPIKAAIESGALRLEDGRTCKLYYGARSMESMPYTEEFEKWEEMGVTVIPCFSQGSASSDLPSARTG----YVQHALEEDGVSMPRNSGALLCGMKGMTEAVKSILTDAGVFPERCLLNF 294
[Close]
BLAST of mRNA_H-akashiwo_Contig1145.9.1 vs. uniprot
Match: A0A7S1BYK0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYK0_9STRA)

HSP 1 Score: 211 bits (538), Expect = 1.200e-63
Identity = 117/246 (47.56%), Postives = 166/246 (67.48%), Query Frame = 2 
Query:  101 WTSVKVVENTAAAEGSKSIIIQ----PSSTIADSYVNPGQYVQMKT-GDG--KPGFYAIANAPGRGKDGS-FEFLVKETDSNGWLTN-AQPGAQLDMSAALGKGFAIDEHFEGFKYDFPLQHIFMFAAGSGIAPIRAALESDTLKIEGGRTATLYYGARNAAQMAYAEKFDAWQ-ERGVNIVPVLSQPEARVGRAPRYVQDALKEDLVPPS-NCGVLLCGMKGMVEDVKYVFTTAGAFEGRLLQNF 805
            W+S +V+  + A   S+ + +      ++T  +++  PGQYVQ++  GD   KP F+A+AN+P   ++G  FEFL+K+ + N + T+  + G ++D+S  LG GF I +HF+G KYDFP Q+I +FAAG+GIAPIR+A+ES +LK++ GR A LYYG R+  +MAYAE+F  W+ E GV +VPV+S   A       YVQ+AL+ED V  + N GVLLCGMKGM E VK + T AG FEGR+L NF
Sbjct:   56 WSSAEVLSVSPAPFHSECVCLTVAAPEAATEEETFQVPGQYVQVRAAGDEECKPSFFALANSPAAAQEGGCFEFLIKKNEGNAYCTSDVKEGDKIDVSQVLGNGFPIADHFDGLKYDFPTQNILLFAAGTGIAPIRSAIESGSLKLDTGRQARLYYGCRSPQEMAYAERFSIWEKEYGVQVVPVVSGDSAEWPGRTGYVQNALEEDGVAVARNTGVLLCGMKGMAEGVKDIVTKAGVFEGRVLTNF 301
[Close]
BLAST of mRNA_H-akashiwo_Contig1145.9.1 vs. uniprot
Match: A0A7S2HMI7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HMI7_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.930e-63
Identity = 126/278 (45.32%), Postives = 169/278 (60.79%), Query Frame = 2 
Query:   41 LSPVSQKGCARRLCMNG--DIEWTSVKVVENTAAAEGSK--SIIIQPSSTIADSYVNPGQYVQMKT-GD--GKPGFYAIANAPGRGKDGS-------FEFLVKETDSNGWLTNAQPGAQLDMSAALGKGFAIDEHFEGFKYDFPLQHIFMFAAGSGIAPIRAALESDTLKI----EGGRTATLYYGARNAAQMAYAEKFDAWQERGVNIVPVLSQPEAR----VGRAPRYVQDALKEDLVP-PSNCGVLLCGMKGMVEDVKYVFTTAGAFEGRLLQNF 805
            LS V QK  +  + M    D  W+   +  N  A   +   S+ ++  + +A  Y  PGQYVQ++  GD   +P F AIA+ P  G D +       FEFL+K+TD+N W+T+  P A +D+S  LG GF   E+ EGFKYDFP Q++ +FA+GSGIAPIRAA+ES  + +    +GGRTA LYYG      M YAEKF  W+  G  +VPV+S+PE      +GR   YVQ+AL+ED VP P N   LLCG+KGMVE VK + + AG FEGR++ NF
Sbjct:   53 LSSVQQKRRSTAIFMGWGPDPIWSKCTISSNAPACPSASCVSVSVEIPADVAAEYKVPGQYVQVRPEGDDNAQPIFLAIASPPTAGADEAAGPTSTTFEFLIKKTDNNDWITDIAPSACVDVSQVLGNGFPTAENMEGFKYDFPTQNVLLFASGSGIAPIRAAIESGQMGVNPPGKGGRTARLYYGVSTPGDMPYAEKFAQWEMAGFQVVPVVSRPEDAKQEWLGRT-GYVQNALEEDGVPVPRNSAALLCGVKGMVESVKDLLSNAGVFEGRIMTNF 329
[Close]
BLAST of mRNA_H-akashiwo_Contig1145.9.1 vs. uniprot
Match: A0A7S3QJ99_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ99_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.790e-63
Identity = 120/253 (47.43%), Postives = 157/253 (62.06%), Query Frame = 2 
Query:  101 WTSVKVVENTAAAEGSKSII---IQPSSTIADSYVNPGQYVQMKTG----DGKPGFYAIANAPGRGKD---GSFEFLVKETDSNGWLTNAQPGAQLDMSAALGKGFAIDEHFEGFKYDFPLQHIFMFAAGSGIAPIRAALESDTLKI----EGGRTATLYYGARNAAQMAYAEKFDAWQERGVNIVPVLSQPEARVGR---APRYVQDALKEDLVP-PSNCGVLLCGMKGMVEDVKYVFTTAGAFEGRLLQNF 805
            W S  +  +T+AA  S + +   +  S+ + ++Y  PGQYVQ+K      +GK  F AIA+APG G +    S EFLVK+TDSN W+TN   G  + +S  LG GF I+E   GFK+DFPLQ+  +FA GSGIAPIRAA+ES  L I    EGGRTA LY+G    A M Y  KF  W+  G+ +VPV+S+PE   G       YVQ+ ++ED V  P N G LLCG+KGM E +K + TTAG FE R++ NF
Sbjct:   91 WESATIT-STSAASASGNFVGLKVDVSADLVEAYKVPGQYVQVKQDINDEEGKVLFLAIASAPGAGAETEGSSIEFLVKKTDSNDWITNVDDGTAIAVSQVLGGGFPIEEEMSGFKHDFPLQNCLLFANGSGIAPIRAAIESGQLNIGKPGEGGRTARLYFGCTTPADMPYLTKFREWETNGIEVVPVISRPEECEGEWTGRTGYVQNLVEEDGVAIPRNTGALLCGVKGMAESIKDLLTTAGVFESRVMTNF 342
[Close]
BLAST of mRNA_H-akashiwo_Contig1145.9.1 vs. uniprot
Match: A0A1E7FVH1_9STRA (Ferredoxin reductase-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVH1_9STRA)

HSP 1 Score: 208 bits (529), Expect = 3.990e-63
Identity = 118/242 (48.76%), Postives = 151/242 (62.40%), Query Frame = 2 
Query:  101 WTSVKVVENTAAAEGSKSIII--QPSSTIADSYVNPGQYVQMKTGD-GKPGFYAIANAPGRGKDGSFEFLVKETDSNGWLTNAQPGAQLDMSAALGKGFAIDEHFEGF-KYDFPLQHIFMFAAGSGIAPIRAALESDTLKIE--GGRTATLYYGARNAAQMAYAEKFDAWQERGVNIVPVLSQPEARVGRAPRYVQDALKEDLVP-PSNCGVLLCGMKGMVEDVKYVFTTAGAFEGRLLQNF 805
            WT+ ++  N +A + + SI +    S   A  Y  PGQYVQ+K  + GKP F AIA+AP   ++  F+FL+K+TD N WLT       +++S  LG GF + +  +   KYDFP Q+I +FAAGSGIAPIRAA+ES  LK    GGRTA LYYGAR    M + +KF  W+  G+ +VPVLSQP         YVQ+AL+ED VP P N G LLCG KGM E V  + T AG FEGR+L NF
Sbjct:    2 WTTSEIKTNDSANKAATSIAVTVDVSPETAQEYKFPGQYVQVKQNEEGKPLFLAIASAPDA-ENAKFDFLIKKTDDNAWLTTGG----VEVSQVLGGGFPVKDELDNVVKYDFPCQNILLFAAGSGIAPIRAAIESGELKTSKSGGRTARLYYGARTEDDMCFVDKFSEWESMGIEVVPVLSQPSDTWKGRTGYVQNALEEDGVPVPRNSGALLCGQKGMAESVTEILTKAGVFEGRVLTNF 238
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1145.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2UVS4_9STRA1.900e-7650.19Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A835YXH2_9STRA1.230e-6951.02NAD_binding_1 domain-containing protein n=1 Tax=Tr... [more]
A0A7S2PRN8_9STRA2.160e-6852.47Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1Z5J6M8_FISSO3.440e-6751.25NAD_binding_1 domain-containing protein n=2 Tax=Fi... [more]
B7G998_PHATC3.840e-6649.18Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7R9UH97_9STRA3.060e-6547.64Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1BYK0_9STRA1.200e-6347.56Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2HMI7_9STRA1.930e-6345.32Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S3QJ99_9STRA2.790e-6347.43Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1E7FVH1_9STRA3.990e-6348.76Ferredoxin reductase-like protein (Fragment) n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1145contigH-akashiwo_Contig1145:338512..349751 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr15683
PFAMsNAD_binding_1
Model size894
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons8
Evalue9.42e-68
EggNOG OGsCOG0543@1|root,2QQ7C@2759|Eukaryota,2XC5S@2836|Bacillariophyta
DescriptionOxidoreductase NAD-binding domain
Cds size726
COG categoryCH
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1145.9.1prot_H-akashiwo_Contig1145.9.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1145 338598..349562 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387096.802178-UTR-H-akashiwo_Contig1145:338511..3385971681387096.802178-UTR-H-akashiwo_Contig1145:338511..338597Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1145 338512..338597 -
1681387096.8851073-UTR-H-akashiwo_Contig1145:349562..3495811681387096.8851073-UTR-H-akashiwo_Contig1145:349562..349581Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1145 349563..349581 -
1681387096.8957548-UTR-H-akashiwo_Contig1145:349688..3497511681387096.8957548-UTR-H-akashiwo_Contig1145:349688..349751Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1145 349689..349751 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387096.8128192-CDS-H-akashiwo_Contig1145:338597..3386721681387096.8128192-CDS-H-akashiwo_Contig1145:338597..338672Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1145 338598..338672 -
1681387096.8252175-CDS-H-akashiwo_Contig1145:347243..3473381681387096.8252175-CDS-H-akashiwo_Contig1145:347243..347338Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1145 347244..347338 -
1681387096.8412876-CDS-H-akashiwo_Contig1145:347967..3480431681387096.8412876-CDS-H-akashiwo_Contig1145:347967..348043Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1145 347968..348043 -
1681387096.8520827-CDS-H-akashiwo_Contig1145:348396..3486221681387096.8520827-CDS-H-akashiwo_Contig1145:348396..348622Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1145 348397..348622 -
1681387096.8597877-CDS-H-akashiwo_Contig1145:348749..3488431681387096.8597877-CDS-H-akashiwo_Contig1145:348749..348843Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1145 348750..348843 -
1681387096.8675485-CDS-H-akashiwo_Contig1145:349014..3491231681387096.8675485-CDS-H-akashiwo_Contig1145:349014..349123Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1145 349015..349123 -
1681387096.8762174-CDS-H-akashiwo_Contig1145:349511..3495621681387096.8762174-CDS-H-akashiwo_Contig1145:349511..349562Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1145 349512..349562 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1145.9.1

>prot_H-akashiwo_Contig1145.9.1 ID=prot_H-akashiwo_Contig1145.9.1|Name=mRNA_H-akashiwo_Contig1145.9.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=242bp
MNGDIEWTSVKVVENTAAAEGSKSIIIQPSSTIADSYVNPGQYVQMKTGD
GKPGFYAIANAPGRGKDGSFEFLVKETDSNGWLTNAQPGAQLDMSAALGK
GFAIDEHFEGFKYDFPLQHIFMFAAGSGIAPIRAALESDTLKIEGGRTAT
LYYGARNAAQMAYAEKFDAWQERGVNIVPVLSQPEARVGRAPRYVQDALK
EDLVPPSNCGVLLCGMKGMVEDVKYVFTTAGAFEGRLLQNF*
back to top

mRNA from alignment at H-akashiwo_Contig1145:338512..349751-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1145.9.1 ID=mRNA_H-akashiwo_Contig1145.9.1|Name=mRNA_H-akashiwo_Contig1145.9.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=11240bp|location=Sequence derived from alignment at H-akashiwo_Contig1145:338512..349751- (Heterosigma akashiwo CCMP452)
TGGACTGGTTTCTTCTCCCAAGTTTGCACTTTCCTCGGTTCTGAGCCCCG
TGTCCCAGAAGGGGTGAGGCTAAACGCCCAGTAGTACAACAGGCTTACCA
TCATTTCAACACTGCTGTCAATGGACTTGGCTTTGGCACGGATTACTTAT
GAACTCACCTTTTTTACCAGGTGTGCTCGGAGATTGTGCATGAATGGCGA
CATCGAATGGACTTCCGTCAAGGTGGTTGAAAACACCGCGGTAAGCATCC
TCTACTACTATTTATTTTCAGGACGTAGGAGGCAGGGAAATTTACTTTTC
CCAGAATGCTAGGTTTTAAAATGAAACAATTTCAGGGAAAGATTCTTGGA
TCTTAATGCCGAGTAATGCATCAACCTGCTCTCCAGGCTGCTGAAGGCTC
CAAGTCCATCATCATTCAGCCTTCCTCCACTATTATTGCTGATAACTACA
TCAACCCCTCCTACTATAACCATATACGACAACAACTGCTTTTGTAGTTT
CAGGACGTAGGAGGCAGTGAGATTTTCTTTTTCCCGAATGCTAGGTTTTA
GAAATGAAATAAACTCAGAGAAAGATTCTTGGATCTAAATGCTGAGTAGT
AATGCACCAACCACCTGCCCTCCTCCAGGCTGCTGAAGGCTCCAAGTCCA
TCATCATTCAGCCTTCCTCCACTATTGCTGATAGCTACGTCAACCCTGGG
CAGTATGTACAGATGAAGACTGGAGACGGCAAGCCAGGTGCGACACCCAA
AACTGTGCCTAATTTTCCCCAAGGATGTGTTGGATGTACCAGCACTCCCT
CCTTCTTCTCGGTGGCTCTAAACAATCTGCCCCATCAATGGCATTCAGGA
TACATCTGGCTTTGTTCCCTTTTCTCCACCAATCGTGCCGCCTGCCTTGT
GGCCCCAGGTTTCTATGCTATAGCCAACGCTCCTGGGCGTGGAAAGGACG
GGTCATTTGAGTTCCTGGTCAAGGAGACTGACAGCAATGGCTGGCTCACA
AAGTAAGCGAAAGGGATAGAGGGTGTTTTACCAGCCATTGACCACATGAA
GATCGTGCAGGAAGCATTGCTTCCCTCCCGAATCTCCCTCTCTCTCTCTC
TCTCTCACCCTCTTTTGCATCACTGCCAGCGCCCAGCCCGGGGCGCAGCT
GGACATGTCCGCCGCGCTGGGGAAGGGCTTCGCCATCGACGAGCACTTCG
AGGGGTTCAAGTACGACTTCCCGCTGCAGCACATCTTCATGTTCGCCGCC
GGCTCGGGCATCGCGCCCATCCGGGCCGCCCTGGAGAGCGACACGCTGAA
GATCGAGGGCGGCCGCACGGCCACGCTGTACTACGGAGCACGGAACGCTG
CCCAGGTGGGGGGGGGGGGCTGGCCGCCCGGCGTCTCTCTGCTGGCCTTG
TTCATTGTCCTGGTTGTTGTTTTTTCGAGGTCAGTAGATTGATTGACCTG
CGGGGTACGACGGGGGAAGGGGGGGCTTCTACTGTACGTAAAATTGTATA
GATGGTAGTGCTTTTGATCTCCAACATCGCAACTAATTTGTATTGTTTGT
AGATGGCGCGTCACGCATTTCATTATTGTCCGTGCAGGCCAAGGGTTCGC
CGGCATCCCATGCTTGTACCGCCCGATTACATCCCTGCCTGCTCCTCTCC
TCCTCTCGCCGTTGCGCCCGCCCCGCCCCCCGGCCCCCGGCCCTCTACCC
CGCCGCAGATGGCGTACGCAGAGAAGTTCGACGCCTGGCAGGAGCGCGGC
GTGAACATTGTGCCTGTGCTCTCCCAACCTGAGGGTGAGAGGGAGGGTGT
TGGTGGGGGGGCTGGCAGCTGCCGCACATGAAGGACCTCAGACAGAGGCG
GCTGTGTGCATGATCCCAAACATGAAGCCCGGCCCGAGCAAGCAAGGCTG
GGGGGCAGGGAGGCTCTTGGTAAGTCAGAGGGCCTTTTAGGGTACCGCCA
AAGGGGGGCGCAACATTTGGAGAGTGATGTGATGCTATGTACCCATGCTT
GAATGAACTACGGCCCCTAGTGCCAATGACTATGACACATGGCCACGCAA
TGCAAACAGCATTGTAACATGTAGTTCCAACTCCAAGCATGCTTAGCTGA
TGCTTCTCTCTGTAACACACACAACCAGTACAAGAACTGAAGTCTGCGTG
TCAAATATAATGGAAGAGGTGCTGGTGCGTGATTCAGTATAATTGCCAGC
CATGCCTAGTCACTTCTTCTCGTAGCACGGTCTTAGCGCAGGAGAATAAA
GTGACGGAAGCGCCCCATTGCTAGCCCCCGCTCCCCTCCTCCCGACACCG
CCCTCAGTTCCAGGCACCGCCGCCCGAGCACAGCCCCTCCCCGTGCCACC
CATGCCCGGCCCCCCGCCCGCCGCCCCCGCCGCCCGCCGCCCGCCCGCCC
GCCCACCCCGCAGCCCGGGTGGGGCGGGCGCCCAGGTACGTGCAGGACGC
GCTCAAGGAGGACCTGGTGCCGCCCAGCAACTGCGGCGTCCTGCTCTGCG
GGATGAAGGTGGGGGGCCGCTGCCGCCGACGGGGGCATACTGTAGTACGG
TACAGGGTTTTAGTGTGCTTGGGAAGTTGGGGTCTCGTTGCAGTCCCTAG
CTCTTTTTTCCCCCACAGGCGAAGCGAAGCTGCTGCTATGTGCTATGCAA
AGAAATCAATCAATTAAACTTCTACCACCCATCATCATTCATAGTTAATG
AAATAATATAAAGATATATGTGAAGGAGAGGAGATTGATGAGGGTATAGT
AGTGATGAGGGGAGCAGCCTGAGCGAGGGTGTAGATGACACGCCTAACTG
GCTGATTGGAAGTTTTGAGAACGTGGAGGCAGAGAAGGACTATATTCTGA
TCGGCAGGAGCAGGAAAGGCCGCTGAGGGAGGAGAAGCAGCGGAGGATAG
CCAAGCTGTGGGTGGATATGATGATGGCAAGAGAGAGGACAGCTAGAGTT
TGAAGGCGGAGATTATGCGATACGCTGCAAATTGGGAATTAAGTCGAGGT
TTTTCAGAGGGCAAAATATATATACGCTGGTATAGATGTTTGGAAGGCAC
TGGGAATATTTGTTCTTGTGTACATGGTAGATGAGCAGTGTTTTCCGGGG
AAGAGGAAGACAGAGACCAGATCCCCCCAGTGGGATCACAACAACGATTA
CCCCCAGGGGGATCTCATATCCCCCCGGGGGGCTTTCAAGAAACCTCAAT
ATATAGTGTAGCTCCATATTGCCAAGGCCACATGTCAGAGGTTTTTAAAA
CGTAAAATATTACAAAGATTTGACGCGGACAACACAGTTCTGGCAAACCA
CCAGCCGTAGCTGGTGGCTATAGCCTGATCAGGGCACCTTGTCTGTAACA
AGCGTCAAAAAGCTCTCATCCTCCAGCGTTGGTGGCGTACCTTGAGTTGC
GTGAATGCCAAGATGAATAGCTATCTAATCCTCCAGAAGCTCAGACTCGC
AGTGGCCCATACTGCAACAATGCGTGGCGGCACACCACCTGCTCCCATTA
ATACCTATTGTTTGGACTAGTTAGCGGTTTAACTAGGACCTGCACCTTTC
CACATTGATCTAGACCTACTTTGTAGGGCACCTTGTTGTTCAATACCCAT
TAACAAAAATTTTCACAATGTGTTTTAATGAATTTCAGCTATTTTGATAT
TGGATCTACAACTCAGTACTAGCCGACAACTATACTGCACATGTACAAGG
ATACCTTCCTCTTAGAAGACCAATAATACTTACTGATGTGAAAGTAAATA
ATTATTTCTAATATATGATGATGATGTATGAGTGTTGAAGAATGAAAGTC
TGGAGTGCTGGAAGTCAGGCAGTGCCATGAATCCATGAAACATCGATAAA
CAGTCCAATTACTGCAGGGGTATAGCTGAGGTCACTCCTAGACACTAAGG
GTACTGCTCCGATGAGGGTGCTAGGATTTGGCTTTGTATTTTTACAAAGG
CAGAGAATTCAGTCACCTTGTAGTGGTGGGTGGCTTGTATGTATCATAAG
TAGTAGGTGGGGTAGTATATGTATGGTGTTACAACAGAGGTCCAATGAAG
CAGGGAAAGATTGTGGTATGAGAGTATTTGTGCTTGTGTTCTTATGATCA
TTTGAGTAGTGGGACTGTGAAATGGCAGATTGAGGTGGAAGGGTCTGCTT
TTAGAAGCTAGGGGTTCCGCCCCGAAAGTGATTTGAAAGGCTATAGACTT
GAAACTAAAATCCTTGACAGGCGATCTTTCTTTCGCGGTTGTTGCCGCTA
TCGCACCGGTCGGATAACGGAAATCGGAAAATTATATTATACTAGTGTAT
ATATATTTTAATTGTTGAAATGAATTGCAATGGTTTTCAGTATAGATGGC
GATTGGTTCCGTGAACCGTGCGTGGGCAAAGCAAACCCGCCGTGCCGGGC
GCCAGGTGCGCAATGGGAAGTGTCCTTGCTTAAGGCTGTCCTTCGCTTAT
TACGAAAACATCTCCTCCTTTCCGGTTTCGAAAGAAGCACTGCCGATGGA
TGAGTTGTCGGAGGAAGCGCCACGGTAGAGACAACTGAAAGAGGGAGATG
AGGCCAAGGACAATAGAGCATGTAGGGTTAAGGATAGCTGGAACTTCGGT
TGGTCAGTAATCACACTTGGCTCAAGAAATGCATCAGATGTCAAGGCAGC
CTGCAAATAGACGGTGGTTGTGTGGTTCAGGATGTGAAGGAACGATTGCA
AGTAGAACGATACAAAAAAAAAAAAAAAAAACATGATGAACCAGGAATGC
CCATCGATGTTGGACTGCACATTTACAGTCACACCATGTGGGTGGATGTG
CGCAGAATGCCGCGGGCATGGATGAAGGAACTGGTGCCTATCGTCTGCCA
AGAATTTGGGGATGGGAGTGAGGGGGTGGGGGTGGTGACAGAGTAAAGGT
AGAAGTGGGGGATTTGCAGCGCTCAGATCGAGGGGTACAGACGGAATCTG
GAGCTGAAATCGCTGATGAGGGGGTTTTGAGGGATGATTCAGGGATTGGG
GGTGAACTTAGTGACGTTGGTGGGCTGAATCTGCAGAGCGACCAAAGCTC
CATCGATGAGACGGCAGCAGTTTCTGGAGGTGCAAGCCAGCAGGTAAATC
TTCCCGGCTTCAAGATTACATCGGCAGTTTCTTTGATTGGCAAATCGGCT
GATCAGGAAGGGATTGATACTGAAATCGGTGAAGTAGTTTCTTGATTGGC
CAATTGGCTGGTCAGAAATTATTGTAAATGACAACAGCACTGGGTAGAAA
CCATTATCAGAAACTGCCACCAATAACACCAACGAGCAGAAGGAATATAA
TTATTGTCTCATCTCAGCATTGGCGATGATGGCGAAGACAGGGTGAGATC
GGGTGGTGGGGCTACTCATCTCGACAGGGTAAGCATCTGCGAAAGTGAAG
AAGGAAGGTTTAGAACGGGAAGCGGGGCTACTTCGTGCGGGGAGCTCCTT
TATGAGGGGGTAGTCAGCTGCGGAGAGGTTTTATCCCAAGGAGTTCAGGA
GTCTAAAAGCGAAGAGGATGGGACTCTGAAGGACGATGGAGTGAATAATA
ATCCTGCAGAGTCTGGACGGAGCAAGTGTGAGACAGGGCAGCGTGGGGGG
AAGATGAGGGGGTCAGACGTCAAAGGCAACGATCAGTCTTGCAAACATGT
TCAATAACGGGACAATCGTGAGACAATCCCTGGGTGGAGAATTTGAAGTG
GCTTGTGAGCTCTGGCGGCATTCCAGAGCACCCTCAAGTTCGATAAAGAC
TTGCACACTGCAGGGATGCCATGTTTGCTGCCGCCGGGGCCGGGCGAGGG
GGGGGCAGTGCAGCATCCAGAAGAACGGACATGCATCAAAGAGCTCTTCC
TGGATAAAGACTTGGGATGGTGTATAAGGCAAAGCATCCTACAGAGGAGT
GGATTGAGGACAGCTGGGGCTGCACTAGTGGGACAACAGAATTGGGGACA
CAGTAGTATTGGGGGCATGCCCCTGTAGATTTATGGTGGGGTTGGGGCAC
TTAGATGGGGGGCTAAACTAGTGGGGTGGGTGGGGTGCAAAACTGCAGAT
GAAATTGTGTTGGAAATTGCATGTGAGAAGTGGCAAACATTGATGGATAT
AGTGTGCGTCTGGTCGTTCCTGCAGGGGGGGGTTCACGCCTCCACGCCTC
CCCTTGTGAGAGGAGATAGCCGAGACCCTGCTGTAAAACTAAATTAACAT
CATCATCATTATCATGTATATAATGTATAAACACATACATTAAGTTTGTG
GCGCCAGAATTGGGTTCATGAGAAATCAATGGCAGATTGATAAGGACACT
TTTTATAATCCAACAAAACTTCATCAGAACTAAATATTTCGATCGAGAGT
CCGATCTTCTTCAGTATTCCCAGCCGCTCTGGATAGTTCAGCTGGAAAAT
ATTATACATTAGTTGTGGTTTCCCAGCTCATCATTCTTCTTCTTCTCTCT
TGTTCATCATCATCATCATTCTTCTTCTTCTTCTTCTTCTCGTGTTCATC
ATTTTGTGTTCATGATTCATAACCATTCATCATGGCTTCTTTAGTAAGCC
CCATCTTAGACCTTTTCATAGTAGTGCACTACTTGCTTGTCAAGACATGG
TTCTCACTGGTTTACAAAACCAAGAAGGCAACTCAGTCATTACTGACTTG
CCTCTCTGTTGGTTATGGGCAATTCGTGCATGCTATTCTATCTCTCTGGT
TCATTCTGCTAGCCATTCCCTCGTGGGTTTTGCCGGCGCTGCTACCCCCC
TTTCTGGGTGGCGGTGCCATTGCGGTCATCGCGGCAACCACCTCTGTTCT
GCTAGGATCGTCCTCGTCCATGGCTGCCCTTGATTCTTCAGCGTGCTACT
TGGACACTGGCTGTACGTCTATTATGACTAACAACTCAGCCTTGCTCTTT
GGTGCTTCACCATCGCAGGTCCAGATCACTACTGGGAATTTGGGTGCCCT
GATGTCTGCTTCGCCCCAAGGCACCGCGCTGCTTTCAAGTCACCTTTCAC
GTGTCGTTCCTTTGCTTTCAGCCAGTCTCTGTATTGTGGCCAGCTTCCGT
GCACTTTGGTGCCGTTGACTGTCGCGAGCAGGTCTGGCTTGAAGTCAGTT
CTGATAAAGACTCGCCGCTTTTTCGATTTTATTATCGCCACGAGCTGCAG
TTCTCGGCGGTCGCCAACGAGACTGGTCTTTATCGCTGGACTGGGAGCTC
TCTCTGAATCGAATCCTACTCAGCCCTCTGATCCTTCTGCCAATCCTTCG
TCTGATCCTTCTCAGCCCTCTGATTCTCCTTCTTTCTCCGCTGGTGATGC
TCCTGGTTACTCCGAGTCTGCGCTGGTGGCTGATGCCCGTATTGACAATA
CAATGTCTCTCTGGCACCACCGTCTTTCTCATGCATCTGAACCTCTGATC
CGCCAAATGGCTGCAGACAGCCATCTTATCAATCTATCCGACAAACTTCC
CTTCTGCACCTCCTGCACCGATATGAACGGAACATGACAAAAAAGGGTCC
GATTCCAAACGGGCCTTTCGTGATGTTTCGGACTCTCCAGTTGTCTCTCG
TATACTGCAAGAAATCTCTGTTGATGTAGCCGGACCGTTTCCGAAAGACC
GTTCCGGACAACGCTGGTTCGTTCTTTTTGTGGATCGTAAGTCGCGCTTT
CGCATGATTGGGCTTATGAAAAACAAGAACGACACCTTCCAGCATTTTAT
ATCCTTCTGCCAGTCAGCAACTAGGTCCCATCCTGACATCTCTGTCGACG
ACGTTGCCTCCATCCGTATGGATGGGGGTGATACCGATGGCGTGTTTTCT
GAAATTCGGGCTTATGCCGCTCAACACGGGATTCGGATTCTGCCTACGGG
TAGGTCGAACCCGAACGGCAACAGCATCGCTGAGACCTCTATTAAAGTCT
GTTGTCAGAGAATGCGTGCTTCTTTGCACTCCAGCAACCTCTCTGGTTCC
TATTGGTCTGAAGCCCTTCTTCATTCCGTTGAAACGACCAGTCGGTTGCC
GACAAAGGGTCTGCCCAATCACATCTCTCCTTATGAGTCGTGGTATGGTC
ATAGACCTTCCATACGTCATCTTAGGTCTTTCGGTGCTTCTTGCTATGCC
TACCTCCCTGTGGAGCGTCGTCTTGGCAAGCTCTCCTCTAAGGGAGTTCT
TCACAAGTTTCTCTCCTATGGCTCCAGCACGGGGGTGTATCGCCTCTTGT
CGCCCAAGAATAAGGTCGTCCTCACTAAATTCATCGTTTTTGATGAAACG
TCAGTTATTTCGAAATCTTCTCTTTCTGATGACGGCACTTCCAATCACCC
AGCTGAATCTTCCTCTTCTGATAGCGAAATTTCAAATAATTCGTCTACTT
CTGGTGATGTTCTCCCCCTGCCACGGGAGTCGTGATCCAATTCTCAACAT
TCGTCATCGAATTCTTCTGTCCAATCAGATTCTGATTCTGGTGCTTCTTC
CTCCTCCCATGATGACTCGTCAGCGAATTCGTTGCCGTCAGTGAATCTGC
CTGCTCCTCCTGTCTCCTCTCCCTCCACCAAGAACCTGTTGCCTTCTGGT
ACTGGTCGTGGTGGTGGTTCTTCGGTCTCTCAAACGAATCGCGTCTTCTT
CGTCGTCGTGCCAGGTCTCGTATTGCAAACTATGCACGCAAACTTCGCAG
AACTTCTGCACGGTTTCAAAGCGCAAAACGTCGGCAGCCCATCTCGATCC
GTGAGCTTCAGAATATGAGCAATGCCTTTGCCTTTCTCGGTACCCATGGC
GACTCCACTGACAGGCTGCCTCAGAGTCCTGGTGAGGCCCGTTGCCTCCC
TGACTGGCCTGAGTGGCGGGATGCTCTTAATGGCGAGCTGAGCAGTATCA
CTGACAAGAATACCTACACTCTGGTTGACCGTCCTCCTCACGCAAATGTT
ATTGGTACTCGCTGGGTGCTCTAAAAAAAATTCGATGCCGATGGTCACTT
GGTTAAACATAAGGCCAGATTGGTTGCTCAAGGCCACACTCAGGAGTTTG
GTGTTGATTATCGGCAGACCTACTCGCCCGTTGTCAATGCGGCCAGTCTT
AGGCTGCTGCTTGCTATCTCCGCGAACAAGGGCTATGCAGTTGACTCTCT
GGACATTAGTACAGCTTTTCTGAATGGGGATATGGCCGAGGACGTCTACG
TAAAGCAGCCTCCAGGCTTTGTGGATCCTGAGCATCCCGATAAAGTTTGG
AAACTGAACAAGGCGCTGTACGGGTTGCGCCAAAGCCCACGCATCTGGTA
CATGGAGTTGCATGATCATCTCCTGTCTTTGGGTTTTCAGCGTAGTGGGC
ATGAATCCTGCTTGTACATTAAATCACGGAGGCCATGAGCTGATGGTGGC
TGTATACGTTGATGATCTTGTCGTTAGTGGCAGCTCTCCCGCCCTTGTCT
CTGATTTCAAGCAGTCTCTTGCGTCCAAATACGATCTCACCGATCAGGGG
GAGCTTACTCAAATCCTCGGCATCAAGGTCGTTCGAGACAAGCGCAACAA
GTGCTTCTATCTCTCCCAAACCTCTTTCATTAAGGATGCACTCTCCAAGT
TCGGGCTCGATTACCTACCTGCGTGCGCGACGCCGATGGATCACACCGTT
GATCTGACGCCTACCCCTGGCTTCAAGGCCGAGCTCTCCGACGCGAATAT
GTATAGGTCCATGGTTGGCACGTTGGCCTGGGTTGCAAACTGGACGAGGC
TGGAGCTGGCTTTTACGGTTCACAAGCTTCAGCGCACTCAGTGTAACCCA
GAGGCCAAGCATTTCGAGGCGGCCGAGCGTGCGTTTCGTTATCTTAAAGG
CACTCAGTCTGAATCGTTGCGACTAGGTGGCGATCTGGTGCTACGTGCGT
TCTCTGATTCGGATTTCTGCTCTGACCGTATTGATGGCAAGTCTGTCACA
GGGTACGTTCTGTTTCTGGGTGACGCGCCTATACTTTGGTCCTCAAAGCT
TCAAGGGGCGGTCACTACCTCCACAGTGGAAGCAGAGTATCTCGCTCTTC
GGTCGTCTGTCAAAGACATCATGTGGCTCCGGCATCTTCTTGCTGATCTT
GTGTGTCCCCAGCAGGAGCCTACTCCTGTTGTAGAGGACAATAGTGCCTG
CATTGAATGGGCAAATGACTTATTGGTCTCCAAAAAGAATAGGTATTTCC
ATGTATCCTACTACCATCTTGCTAAGGAGCAGGTGAGCCTTGGGACTATC
AGGATGTTCTTCATTAAGACTCATGACCAGGTGGCTGATATTTTTACCAA
AGCTCTCAATGCAGAAAATTTTGACAGGCACCAGAGGGTGCTGCATCATG
GTTTCAGTGCCTGATGATGCTGGTCTGGGGGAGCATTAGTTGTGGTTTCC
CAGCTCATCATTCTTCTTCTCCTCTCTTCTCTCTTGTTCATCATCATCAT
CATTATTCTTCTTCTTCTTCTCGTGTTCATCATTTTGTGTTCATGATTCA
TAACCATTCATCATGGCTTCTTTAGTAAGCCCCATCTTAGACCTCTTCAT
AGTAGTACACTACTTGCTTGTCAAGACATGGTTCTCACTGGTTTACAAAA
CCAAGAAGGCAACTCAGTCATTACTGACTTGCCTCTCTGTTGATATATCA
ACGAAACTCTTCTTGCAACATCATCACCACACACCCCGCGCATTGCTGCT
CGGCTCTCGGCAAAGTGGTAGAAGCCTCTCTCAACGGTCAGCAACTGGGT
GCGTGTCCGCGTGCAGTTCCCGCTCATCAAAGCGGTGGATCTGCGGACCA
GGGGCTCCAGGAAGAGGTGGAGGAGCTCGGGGTTCGAGGATGGCGAGGGG
ATTGCCACTCTCTTCCAGAGATAGGTGGGGTGTGCTGTATTTGATGTTTT
GTATTGATTTGAGTTTTGGGATTTCATGTGTAGGTTTTGGTATATTACCA
CCACAGGGACATCTGCATAGATGCAAGGCGTAGGTTGTTTTGTTTAAATT
TAACTCTCTCTTTATATATAATATACATATATTGATACATATAATCTATA
GCAGCTTTACAAGTTTTGTTAAATAGCACTGCTCCTCTTTGCTGTGTTTG
CTACAAACATTGTTGTTTTCAACCATCAGGGCATGGTAGAGGATGTGAAG
TATGTTTTCACGACTGCTGGTGCTTTTGAGGGACGCCTCCTTCAAAACTT
TTGAGCGATCTAATCTACTAGTTTGTTGATCATCAACACCACCACCAGCA
GAAAACTGTTCATACCATCATGATCTGCTGATTATTGTTT
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig1145:338512..349751-

>mRNA_H-akashiwo_Contig1145.9.1 ID=mRNA_H-akashiwo_Contig1145.9.1|Name=mRNA_H-akashiwo_Contig1145.9.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=726bp|location=Sequence derived from alignment at H-akashiwo_Contig1145:338512..349751- (Heterosigma akashiwo CCMP452)
ATGAATGGCGACATCGAATGGACTTCCGTCAAGGTGGTTGAAAACACCGC
GGCTGCTGAAGGCTCCAAGTCCATCATCATTCAGCCTTCCTCCACTATTG
CTGATAGCTACGTCAACCCTGGGCAGTATGTACAGATGAAGACTGGAGAC
GGCAAGCCAGGTTTCTATGCTATAGCCAACGCTCCTGGGCGTGGAAAGGA
CGGGTCATTTGAGTTCCTGGTCAAGGAGACTGACAGCAATGGCTGGCTCA
CAAACGCCCAGCCCGGGGCGCAGCTGGACATGTCCGCCGCGCTGGGGAAG
GGCTTCGCCATCGACGAGCACTTCGAGGGGTTCAAGTACGACTTCCCGCT
GCAGCACATCTTCATGTTCGCCGCCGGCTCGGGCATCGCGCCCATCCGGG
CCGCCCTGGAGAGCGACACGCTGAAGATCGAGGGCGGCCGCACGGCCACG
CTGTACTACGGAGCACGGAACGCTGCCCAGATGGCGTACGCAGAGAAGTT
CGACGCCTGGCAGGAGCGCGGCGTGAACATTGTGCCTGTGCTCTCCCAAC
CTGAGGCCCGGGTGGGGCGGGCGCCCAGGTACGTGCAGGACGCGCTCAAG
GAGGACCTGGTGCCGCCCAGCAACTGCGGCGTCCTGCTCTGCGGGATGAA
GGGCATGGTAGAGGATGTGAAGTATGTTTTCACGACTGCTGGTGCTTTTG
AGGGACGCCTCCTTCAAAACTTTTGA
back to top