mRNA_H-akashiwo_Contig1145.8.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1145.8.1 vs. uniprot
Match: A0A7S3XLC0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLC0_HETAK) HSP 1 Score: 230 bits (587), Expect = 7.420e-73 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
Query: 40 PIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNIGPMMYPHKFV 369
PIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNIGPMMYPHKFV
Sbjct: 188 PIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNIGPMMYPHKFV 297
BLAST of mRNA_H-akashiwo_Contig1145.8.1 vs. uniprot
Match: A0A7S3QJ82_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ82_9STRA) HSP 1 Score: 171 bits (433), Expect = 5.640e-50 Identity = 82/109 (75.23%), Postives = 89/109 (81.65%), Query Frame = 1
Query: 40 PIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNIGPMMYPHKF 366
PIVR +L NFP+TFDS AKAR+PA+LLGGLFACYLT PFDT+KTCMQGDIER KF F SA V E G T FYRGATFRYGRM IAVGMMDFLQS IGP++YP KF
Sbjct: 159 PIVRSNLMENFPETFDSQAKARIPAALLGGLFACYLTQPFDTIKTCMQGDIEREKFKGFRHSASVVYGESGFTGFYRGATFRYGRMVIAVGMMDFLQSQIGPLLYPSKF 267
BLAST of mRNA_H-akashiwo_Contig1145.8.1 vs. uniprot
Match: A0A7S1ZBJ0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBJ0_TRICV) HSP 1 Score: 163 bits (413), Expect = 5.950e-47 Identity = 76/109 (69.72%), Postives = 89/109 (81.65%), Query Frame = 1
Query: 40 PIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNIGPMMYPHKF 366
PIVR +L N+P+TFDS KARVPA+LLGGLFACYLTHPFDTVKTCMQGDIER F F +++K + KE G AFYRGATFRYGRM AV +MD+LQ+ IGP++YP KF
Sbjct: 159 PIVRRTLMENYPETFDSQQKARVPAALLGGLFACYLTHPFDTVKTCMQGDIERKTFGSFTETSKALYKESGFPAFYRGATFRYGRMVCAVALMDYLQAMIGPLLYPAKF 267
BLAST of mRNA_H-akashiwo_Contig1145.8.1 vs. uniprot
Match: A0A7S4HPD5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HPD5_9STRA) HSP 1 Score: 156 bits (394), Expect = 4.270e-44 Identity = 76/109 (69.72%), Postives = 86/109 (78.90%), Query Frame = 1
Query: 40 PIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNIGPMMYPHKF 366
PIVR +L +P+TFD++AKARVPASLLGGLFACYLT P DTVKTCMQGDIER F F ++AK + KE G FYRGATFRYGRM AV MMD LQ+ IGPM+YP KF
Sbjct: 159 PIVRRNLMEMYPETFDTEAKARVPASLLGGLFACYLTQPADTVKTCMQGDIERKTFGSFTETAKVLYKESGIPGFYRGATFRYGRMVCAVFMMDTLQAMIGPMLYPAKF 267
BLAST of mRNA_H-akashiwo_Contig1145.8.1 vs. uniprot
Match: A0A6U5F8K7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5F8K7_9STRA) HSP 1 Score: 155 bits (393), Expect = 6.040e-44 Identity = 73/109 (66.97%), Postives = 83/109 (76.15%), Query Frame = 1
Query: 40 PIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNIGPMMYPHKF 366
PI+R L T +P+ FDS KARVPA+LLGGLF CYLTHPFDTVKTCMQGDIERT + F D+AK + E FYRGATFRYGRM AV MMD LQ+NIGP++YP F
Sbjct: 159 PIIRRELMTRYPERFDSVNKARVPAALLGGLFGCYLTHPFDTVKTCMQGDIERTTYGTFTDTAKKIYTESSIAGFYRGATFRYGRMVCAVFMMDVLQANIGPLLYPKAF 267
BLAST of mRNA_H-akashiwo_Contig1145.8.1 vs. uniprot
Match: A0A7S4T3Z5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T3Z5_9STRA) HSP 1 Score: 154 bits (388), Expect = 3.310e-43 Identity = 73/100 (73.00%), Postives = 82/100 (82.00%), Query Frame = 1
Query: 40 PIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNI 339
PIVR +L +P+TFDSD KARVPA+LLGGLFACYLTHPFDT+KTCMQGDIER F D+AK + KEG AFYRGATFRYGRM IAVGM+DFLQ +I
Sbjct: 159 PIVRTTLREQYPETFDSDQKARVPAALLGGLFACYLTHPFDTIKTCMQGDIERKTFGTLTDTAKILFKEGSIPAFYRGATFRYGRMVIAVGMLDFLQVSI 258
BLAST of mRNA_H-akashiwo_Contig1145.8.1 vs. uniprot
Match: A0A7S2LBN4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LBN4_9STRA) HSP 1 Score: 151 bits (381), Expect = 3.620e-42 Identity = 74/109 (67.89%), Postives = 85/109 (77.98%), Query Frame = 1
Query: 40 PIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNIGPMMYPHKF 366
PIVR +L +PD FD+D KARVPA+LLGGLFACYLT PFDTVKTCMQGDIER F F +AK + E G TAFYRGATFRYGRM AV MMD+LQ+ +GP++YP F
Sbjct: 158 PIVRRNLREMYPDKFDTDNKARVPAALLGGLFACYLTQPFDTVKTCMQGDIERKTFGTFTQTAKKI-SEDGFTAFYRGATFRYGRMVCAVFMMDYLQAAVGPLLYPSAF 265
BLAST of mRNA_H-akashiwo_Contig1145.8.1 vs. uniprot
Match: A0A7S2P3K1_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2P3K1_BIGNA) HSP 1 Score: 146 bits (369), Expect = 5.090e-42 Identity = 68/106 (64.15%), Postives = 82/106 (77.36%), Query Frame = 1
Query: 40 PIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNIGPMMYP 357
PIVR + T P+TF+SD KAR+PASL G LFACYLT PFDT+KTCMQGD+ER F F + K + KEGG TAFYRGATFRYGRM AV M+D L++ +GP+M+P
Sbjct: 24 PIVRNFMRTKMPETFNSDDKARIPASLTGALFACYLTQPFDTIKTCMQGDVERKTFGTFTQTFKALHKEGGITAFYRGATFRYGRMVCAVFMLDKLRATLGPIMFP 129
BLAST of mRNA_H-akashiwo_Contig1145.8.1 vs. uniprot
Match: A0A7S0BVL9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVL9_9STRA) HSP 1 Score: 144 bits (362), Expect = 2.260e-41 Identity = 67/101 (66.34%), Postives = 79/101 (78.22%), Query Frame = 1
Query: 64 TNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNIGPMMYPHKF 366
T FPD FDS AKAR+PA+LLGGLFACYLT PFDTVKTCMQGDIER + F ++AK + E G +AFYRGATFRY RMC A+ MMD LQ +GP ++P+ F
Sbjct: 2 TRFPDKFDSAAKARIPAALLGGLFACYLTQPFDTVKTCMQGDIERKTYGTFSETAKMLHSEAGISAFYRGATFRYARMCCAIFMMDTLQGLVGPALFPNAF 102
BLAST of mRNA_H-akashiwo_Contig1145.8.1 vs. uniprot
Match: A0A448YYZ2_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YYZ2_9STRA) HSP 1 Score: 148 bits (374), Expect = 4.510e-41 Identity = 67/109 (61.47%), Postives = 84/109 (77.06%), Query Frame = 1
Query: 40 PIVRESLTTNFPDTFDSDAKARVPASLLGGLFACYLTHPFDTVKTCMQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLQSNIGPMMYPHKF 366
P+VR +L +P TFD++ KAR+PA+LLGGLF CY+THPFDT+KTCMQGDIER + F+D+AK++ E G T FYRGATFRYGRM AV +MD L+ IG +MYP F
Sbjct: 160 PVVRRTLMDXYPTTFDTNDKARIPAALLGGLFGCYMTHPFDTIKTCMQGDIERKVYGNFIDTAKSINAESGFTGFYRGATFRYGRMVCAVFIMDLLREKIGRLMYPSAF 268 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1145.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1145.8.1 >prot_H-akashiwo_Contig1145.8.1 ID=prot_H-akashiwo_Contig1145.8.1|Name=mRNA_H-akashiwo_Contig1145.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=65bp MQGDIERTKFTRFVDSAKTVLKEGGPTAFYRGATFRYGRMCIAVGMMDFLback to top mRNA from alignment at H-akashiwo_Contig1145:330633..331412- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1145.8.1 ID=mRNA_H-akashiwo_Contig1145.8.1|Name=mRNA_H-akashiwo_Contig1145.8.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=780bp|location=Sequence derived from alignment at H-akashiwo_Contig1145:330633..331412- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1145:330633..331412- >mRNA_H-akashiwo_Contig1145.8.1 ID=mRNA_H-akashiwo_Contig1145.8.1|Name=mRNA_H-akashiwo_Contig1145.8.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=195bp|location=Sequence derived from alignment at H-akashiwo_Contig1145:330633..331412- (Heterosigma akashiwo CCMP452)back to top |