mRNA_H-akashiwo_Contig1140.3.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1140.3.1
Unique NamemRNA_H-akashiwo_Contig1140.3.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1140.3.1 vs. uniprot
Match: A0A7S3XLH9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLH9_HETAK)

HSP 1 Score: 265 bits (676), Expect = 3.330e-85
Identity = 136/152 (89.47%), Postives = 142/152 (93.42%), Query Frame = 1
Query:  589 SDADVEALMRNLTALPEHVDISVGCVYYDVCTRMIAASKAHGYAPDAMLHSICVDNGNFLADTGPAAAGTF--GAVNWHEDMQLTGDVTGWSAKQYADLYRANYSATPPYQSAAYFAGGLALLRAIEDAGTFSDSDEVAFALSRLDIDTFFG 1038
            SDADVEAL+RNL ALPEHVDISVGC+YY+VCTRMIAASKAHGYAP AMLHSICVDNGNFLADTG A  G +  GAVNWHE+MQLTGDVTGWSAKQYADLYRANYSATPPYQSAAYFAGGLALLRAIEDAGT  DSDEVAFALSRLD+DTFFG
Sbjct:    1 SDADVEALIRNLAALPEHVDISVGCMYYNVCTRMIAASKAHGYAPGAMLHSICVDNGNFLADTG-ADDGRYILGAVNWHENMQLTGDVTGWSAKQYADLYRANYSATPPYQSAAYFAGGLALLRAIEDAGTL-DSDEVAFALSRLDMDTFFG 150          
BLAST of mRNA_H-akashiwo_Contig1140.3.1 vs. uniprot
Match: A0A7S2V0E4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0E4_9STRA)

HSP 1 Score: 250 bits (638), Expect = 1.020e-77
Identity = 130/269 (48.33%), Postives = 187/269 (69.52%), Query Frame = 1
Query:  208 VTNITKYLIEEEGAQFMFAPYSTTLTKPAAVVAEDHKIITIAGSASSTSIYTDKKYLFTPLTSSGELMTAGIKSLALRGAETIVKVTQDKTFTQSMCSPLNDYADELAASTGSNVRVIASYVLPAVVSDADVEALMRNLTALPEHVDISVGCVYYDVCTRMIAASKAHGYAPDAMLHSICVDNGNFLADTGPAAAGTFGAVNWHEDMQLTGDVTGWSAKQYADLYRANYSATPPYQSAAYFAGGLALLRAIEDAGTFSDSDEVAFALSR 1014
            V NIT+ LI+EEG  F+ APYST+LTK A+V++E+ K I +AG+ASST+IY  KK+L+T LT S   M A  KSL LRGA   VKV Q   FT+ +CS ++    +++ STG+  ++I    +P   ++ D+ AL+ +L  + EH+D ++ C+YY+ CTR +  ++   +  DAM+ +ICVDN +F +  G A A   G V WHEDM L+GD+TGW+AK++A+LYRA+Y+ TPPYQ+A+ FA  LAL  AIE+A +  DSD+VAFA+SR
Sbjct:    4 VLNITRRLIDEEGIDFLLAPYSTSLTKSASVISEERKKIIVAGAASSTAIYEGKKFLYTALTPSTLHMEAVTKSLVLRGASNFVKVHQAAGFTKGVCSAIDGVLSDVSESTGNKAQIIYDSEIPDPPTNDDISALLDDLMDIEEHIDATIACMYYEPCTRFLKMAEQRQFKSDAMVFTICVDNPSFPSAVGDAGAHIMGTVQWHEDMLLSGDITGWTAKEFANLYRAHYNETPPYQAASAFAVNLALTVAIENAQSL-DSDDVAFAMSR 271          
BLAST of mRNA_H-akashiwo_Contig1140.3.1 vs. uniprot
Match: A0A3M2A479_9CHLR (Branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M2A479_9CHLR)

HSP 1 Score: 176 bits (447), Expect = 2.170e-47
Identity = 126/393 (32.06%), Postives = 201/393 (51.15%), Query Frame = 1
Query:   10 NGSITFGLPVTLNGTSATYLKMGPMIRNTLEMWVWWVNEIHGGIKVGDQTFNAEVKYVNDWHSSAHVTNITKYLIEEEGAQFMFAPYSTTLTKPAAVVAEDHKIITIAGSASSTSIYTDK-KYLFTPLTSSGELMTAGIKSLALRGAETIVKVTQDKTFTQSMCSPLNDYADELAASTGSNVRVIASYVLPAVVSDADVEALMRNLTALPEHVDISVGCVYYDVCTRMIAASKAHGYAPDAMLHSICVDNGNFLADTGPAAAGTFGAVNWHEDMQLTGDVTGWSAKQYADLYRANYSATPPYQSAAYFAGGLALLRAIEDAGTFSDSDEVAFALSRLDIDTFFGTINFNSVNQN-SNDFSYVQYDENAELQIVIPDAVATGPLIHPMPSWSDR 1182
            +G I  G  V+  G    Y + G   R    +W+ WVN  +GGI+VGD+ +  E+ Y +D        N+ + LI E+   F+  PYS+ LT   + +AE + +I + G+ +S SI+    + +F  LT +G    + +K+LA +GA+T+V   +D  F  S+      +A+E     G  V  + +Y  P  V  ADV A+M     L  + D+ VG  +++     ++A++  G+ P AM+ ++   N  F+ + G AA    G   W   M   G   G  A +YA  Y A ++  P YQ+A   A  LAL  AIE+AGT  + D V  AL  LD+ TF+G I F+   +N +     +Q  ++ E+ +V P+  A   L++PMP+W DR
Sbjct:   60 DGVIRLGAAVSETGK---YAREGKDTRQGYNLWLDWVNNEYGGIRVGDKRYKVEIVYYDDEGDPDTAANLVEKLITEDEVDFLLGPYSSGLTIATSAIAEKYGVIMVEGNGASESIFERGFQNIFGVLTPAGNYTQSALKALADKGAKTVVVAYEDTAFPTSVAEGAIKWAEEY----GMEVLAVETY--PKDV--ADVSAIMTKFRDL--NPDVFVGGGHFNDALLFVSAAQELGFTPKAMVITVGPSNPQFVEEVGDAANYIIGPTQWEASMTWQGKYLGTPA-EYAARYEAMWNEPPTYQAAESTATALALQAAIENAGTL-EMDAVREALRNLDLMTFYGPIRFDETGKNVAKPMGAIQI-QDGEILVVAPEEAAVADLLYPMPAWEDR 436          
BLAST of mRNA_H-akashiwo_Contig1140.3.1 vs. uniprot
Match: A0A6B1ECU5_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1ECU5_9ACTN)

HSP 1 Score: 166 bits (420), Expect = 1.110e-43
Identity = 120/385 (31.17%), Postives = 192/385 (49.87%), Query Frame = 1
Query:   10 NGSITFGLPVTLNGTSATYLKMGPMIRNTLEMWVWWVNEIHGGIKVGDQTFNAEVKYVNDWHSSAHVTNITKYLIEEEGAQFMFAPYSTTLTKPAAVVAEDHKIITIAGSASSTSIYTDK-KYLFTPLTSSGELMTAGIKSLALRGAETIVKVTQDKTFTQSMCSPLNDYADELAASTGSNVRVIASYVLPAVVSDADVEALMRNLTALPEHVDISVGCVYYDVCTRMIAASKAHGYAPDAMLHSICVDNGNFLADTGPAAAGTFGAVNWHEDMQLTGDVTGWSAKQYADLYRANYSATPPYQSAAYFAGGLALLRAIEDAGTFSDSDEVAFALSRLDIDTFFGTINFNSVNQNSNDFSYVQYDENAELQIVIPDAVATGPLIHP 1161
            +G+I  G P++  G  A     G   R   + W+ WVNEIHGGI+VGDQ + AE+ Y +D   +    N+T+ LI+++   F+  PYS+ LT PA+ VAED+ ++ + GS +S +++    + LF   T + +   + I++LA RGA T V   +D  F  ++      + +    + G +V  + +Y  P  + D  V A+M     L    D+ VG  +Y+     + +++  G+ PD ML ++   N   + + G    G  G   W   M  +G   G +A  YA  Y + +   P YQ+A+  A  L L  AIE AG+  D+D V  AL  L  DTF+G INF+    N+          + E+ +V P   AT  + +P
Sbjct:   42 DGTIRLGTPLSETGKFAVE---GKDTRQGYDTWLRWVNEIHGGIRVGDQRYRAEIVYYDDESDADTAGNVTQRLIDDDRVDFLLGPYSSGLTAPASAVAEDNNVLMVEGSGASDAMFERGFQNLFLVATIASDYTRSSIEALANRGARTAVVAHEDALFATAVAEGAVRHLE----ANGIDVLAVEAY--PEGIQD--VSAIMTEFRDLDP--DLFVGGGHYNDAVLFVNSAREIGFEPDGMLITVGPSNPRLVDELGRDVDGVLGPTQWEPSMAYSGPYFG-TATDYAGYYESLWGEPPVYQAASATAAALTLHLAIEAAGSI-DTDAVRAALRELSADTFYGPINFDERGVNTAKPMGTVQILDGEIVVVAPAEAATAQIQYP 411          
BLAST of mRNA_H-akashiwo_Contig1140.3.1 vs. uniprot
Match: A0A3M1Z524_9CHLR (Branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1Z524_9CHLR)

HSP 1 Score: 162 bits (411), Expect = 2.670e-42
Identity = 119/389 (30.59%), Postives = 190/389 (48.84%), Query Frame = 1
Query:   19 ITFGLPVTLNGTSATYLKMGPMIRNTLEMWVWWVNEIHGGIKVGDQTFNAEVKYVNDWHSSAHVTNITKYLIEEEGAQFMFAPYSTTLTKPAAVVAEDHKIITIAGSASSTSIYTDK-KYLFTPLTSSGELMTAGIKSLALRGAETIVKVTQDKTFTQSMCSPLNDYADELAASTGSNVRVIASYVLPAVVSDADVEALMRNLTALPEHVDISVGCVYYDVCTRMIAASKAHGYAPDAMLHSICVDNGNFLADTGPAAAGTFGAVNWHEDMQLTGDVTGWSAKQYADLYRANYSATPPYQSAAYFAGGLALLRAIEDAGTFSDSDEVAFALSRLDIDTFFGTINFNSVNQNSNDFSYVQYDENAELQIVIPDAVATGPLIHPMPSWSDR 1182
            I FG  V+  G    Y + G   RN   +W+ WVNE HGGI V    + AE+ + +D      V+ +T+ LI E+G  F+  PYS++LT+ A+V+ E   +I + G+ +S S++    + LF  LT +     +GI+     GA T V   +D  F  S+      + +EL    G  +  + SY  P  V+D  V A+  N   L    D+ VG  +++     +  ++  G+ PDA L ++   N  F+ + G  A    GA  W   +    +  G SA  YA+ Y   +   P YQ+A   A  L L +AIE AG+  D+D V  AL  ++++TF+G I+F+   +N          ++ E+ +V P+  A    + PMP W +R
Sbjct:   49 IKFGAAVSDTGK---YAREGGDTRNGYTLWLEWVNEEHGGIYVDGTCYRAEIIFYDDESDPDTVSVLTERLIVEDGVDFILGPYSSSLTQVASVITERENVIMVEGNGASDSLFERGFQNLFAVLTPASYYTRSGIELAYEMGARTAVVAYEDTAFPTSVAEGAQHWLEEL----GFEILAVESY--PKDVTD--VTAMFTNFRELDP--DLFVGGGHFNDAVLFLNTARELGFEPDAFLITVGPSNPTFVEEMGDTANFVLGAAQWDPSLAYEDEWFG-SASDYAERYEERFGIPPSYQAAESTATALVLHQAIEMAGSL-DTDAVRQALLDMELETFYGPIDFDETGKNVGKPMVTIQIQDGEILVVAPEDAAVAEPVWPMPGWDER 422          
BLAST of mRNA_H-akashiwo_Contig1140.3.1 vs. uniprot
Match: A0A3M1HL89_9CHLR (Branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1HL89_9CHLR)

HSP 1 Score: 162 bits (410), Expect = 4.120e-42
Identity = 115/375 (30.67%), Postives = 190/375 (50.67%), Query Frame = 1
Query:   64 YLKMGPMIRNTLEMWVWWVNEIHGGIKVGDQTFNAEVKYVNDWHSSAHVTNITKYLIEEEGAQFMFAPYSTTLTKPAAVVAEDHKIITIAGSASSTSIYTDK-KYLFTPLTSSGELMTAGIKSLALRGAETIVKVTQDKTFTQSMCSPLNDYADELAASTGSNVRVIASYVLPAVVSDADVEALMRNLTALPEHVDISVGCVYYDVCTRMIAASKAHGYAPDAMLHSICVDNGNFLADTGPAAAGTFGAVNWHEDMQLTGDVTGWSAKQYADLYRANYSATPPYQSAAYFAGGLALLRAIEDAGTFSDSDEVAFALSRLDIDTFFGTINFNSVNQN-SNDFSYVQYDENAELQIVIPDAVATGPLIHPMPSWSDR 1182
            Y + G   R+   +W+ WVNE +GGIKVGD+ +  E+   +D         + + LI E+   F+  PYS+ LTK A+ +AE + +I + G+ +S S++    K LF  LT +G    + +++++ +GA+++V   +D  F  S+      +A E     G  +  + +Y  P  V  ADV ++M     L  + D+ VG  +++     + A+K   ++P AM+ ++   N  F+ + G  A    G   W   M       G +AK Y D Y A +   P YQ+A   A  L L  AIE AG+  ++  V  AL  +DI TF+G I F+   +N       +Q  ++ E+ +V P++ A   LI+PMP WS+R
Sbjct:   66 YAREGGDTRHGYLLWLDWVNEEYGGIKVGDERYKVELIMYDDEGDPDTTAKLVEKLITEDKVDFLLGPYSSGLTKSASAIAEKYDMIMVEGNGASESLFERGFKNLFGVLTPAGNYTQSALEAVSKQGAKSVVIAYEDTAFPTSVAEGAQRWAQEY----GMEILAVETY--PKDV--ADVSSIMTKFKDL--NPDVFVGGGHFNDALLFVRAAKELDFSPKAMIITVGPSNPKFVQEVGADANYIIGPTQWEASMSYEDPYFG-TAKDYYDRYLAKWGEPPTYQAAESTATALVLQLAIEQAGSL-ETAAVREALKNMDITTFYGPIKFDETGKNVGKPMGSIQI-QDGEIVVVAPESAAVADLIYPMPPWSER 427          
BLAST of mRNA_H-akashiwo_Contig1140.3.1 vs. uniprot
Match: A0A6N9EMY0_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EMY0_9ACTN)

HSP 1 Score: 164 bits (414), Expect = 7.110e-41
Identity = 120/386 (31.09%), Postives = 195/386 (50.52%), Query Frame = 1
Query:   13 GSITFGLPVTLNGTSATYLKMGPMIRNTLEMWVWWVNEIHGGIKVGDQTFNAEVKYVNDWHSSAHVTNITKYLIEEEGAQFMFAPYSTTLTKPAAVVAEDHKIITIAGSASSTSIYTDK-KYLFTPLTSSGELMTAGIKSLALRGAETIVKVTQDKTFTQSMCSPLNDYADELAASTGSNVRVIASYVLPAVVSDADVEALMRNLTALPEHVDISVGCVYYDVCTRMIAASKAHGYAPDAMLHSICVDNGNFLADTGPAAAGTFGAVNWHEDMQLTGDVTGWSAKQYADLYRANYSATPPYQSAAYFAGGLALLRAIEDAGTFSDSDEVAFALSRLDIDTFFGTINFNSVNQN-SNDFSYVQYDENAELQIVIPDAVATGPLIHPM 1164
            G+I  G  ++  G    Y   G   R   + W+ WVN+IHGGI VGD+ + AE+ Y +D   +    N+T+ LI+++   F+  PYS+ LT   + +AE + ++ + G+ +S +++    + LF   T + +   +G+++LA RGA T V   +D +F  ++      + +    +TG  V  + +Y  P  + D    A+M     L    D+ VG  +Y+     + ++K  G+ PD ML ++   N   +A+ G    G  G   W   M+  G   G SA  YA  Y + +   P YQ+A+  A  LAL  AIE AG+ +D+  V  AL +L  DTF+G I+F+    N S     VQ  +  E+ +V PDA AT  L +P+
Sbjct:   85 GTIRLGAALSETGK---YSVEGKDSRQGYDTWLRWVNDIHGGISVGDERYRAEIVYYDDESDADTAGNLTQRLIDDDRVDFLLGPYSSGLTTGTSAIAEANNVLMVEGNGTSDTMFERGFQNLFLVATIASDYTRSGVEALAARGARTAVIAHEDTSFATAVAQGAVRHLE----ATGIEVLAVETY--PKDIQDTS--AIMTKFRDLDP--DLFVGGGHYNDAVLFVNSAKELGFEPDGMLITVGPSNPKLVAELGDDVDGVLGPTQWEPSMEYAGPYFG-SAADYAGYYESLWGEPPVYQAASATAAALALHLAIEAAGS-TDTAAVRAALRQLSADTFYGPISFDDRGVNVSKPMGMVQVLDG-EIVVVAPDAAATAELRYPL 454          
BLAST of mRNA_H-akashiwo_Contig1140.3.1 vs. uniprot
Match: A0A6N7GFQ4_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Micromonosporaceae bacterium TaxID=1873464 RepID=A0A6N7GFQ4_9ACTN)

HSP 1 Score: 156 bits (394), Expect = 6.560e-40
Identity = 111/385 (28.83%), Postives = 185/385 (48.05%), Query Frame = 1
Query:   10 NGSITFGLPVTLNGTSATYLKMGPMIRNTLEMWVWWVNEIHGGIKVGDQTFNAEVKYVNDWHSSAHVTNITKYLIEEEGAQFMFAPYSTTLTKPAAVVAEDHKIITIAGSASSTSIY-TDKKYLFTPLTSSGELMTAGIKSLALRGAETIVKVTQDKTFTQSMCSPLNDYADELAASTGSNVRVIASYVLPAVVSDADVEALMRNLTALPEHVDISVGCVYYDVCTRMIAASKAHGYAPDAMLHSICVDNGNFLADTGPAAAGTFGAVNWHEDMQLTGDVTGWSAKQYADLYRANYSATPPYQSAAYFAGGLALLRAIEDAGTFSDSDEVAFALSRLDIDTFFGTINFNSVNQNSNDFSYVQYDENAELQIVIPDAVATGPLIHP 1161
            +G++ FG  V+L G    Y                WVN  HGGI++GD+ + AE+ Y +D  +      +T+ L+  +   F+  PY++ L  PA+ +A+ H+ I + G+AS+ S++    ++ F+ +T +       + +LA  GA T+V   +D  F      P++     +A +    + V+A    P  V  ADV  ++     L    D  +G  Y+        A++  G+AP AM+ ++   +  F  + G AA    G   W   M   G   G SA  YA  Y  ++   P YQ+A   A  L L  AIE AGT ++++ V  AL  LD++TF+G ++F+   +N+         +   L+++ PD VATG LI+P
Sbjct:   42 DGTVRFGATVSLTGK---YXXXXXXXXXXXXXXXGWVNNDHGGIRLGDRRYRAEIVYYDDESNPGTAAALTERLVTRDNVDFLLGPYASALNAPASAIADRHQTIMVTGTASADSLFGRGFRHYFSVMTVASRYAEPALDALAAAGARTVVVAHEDTEF------PIDAGEGAVAHARTLGMDVLAVETYPRAV--ADVSGIIAKFRTLDP--DAFIGAGYFGDALLFARAAQEQGFAPAAMVLTVGPTSPAFADELGTAAELVIGPTQWEASMDWRGRWFGTSA-DYAARYSRDHGEAPTYQAAGSTAAALVLQLAIERAGT-TEAEAVRGALMALDMETFYGPVDFDRTGRNAAKLMGAVQIQQGGLELITPDEVATGRLIYP 411          
BLAST of mRNA_H-akashiwo_Contig1140.3.1 vs. uniprot
Match: A0A7K2DH66_9ACTN (ABC transporter substrate-binding protein n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2DH66_9ACTN)

HSP 1 Score: 155 bits (391), Expect = 1.610e-39
Identity = 115/386 (29.79%), Postives = 189/386 (48.96%), Query Frame = 1
Query:   10 NGSITFGLPVTLNGTSATYLKMGPMIRNTLEMWVWWVNEIHGGIKVGDQTFNAEVKYVNDWHSSAHVTNITKYLIEEEGAQFMFAPYSTTLTKPAAVVAEDHKIITIAGSASSTSIYTDK-KYLFTPLTSSGELMTAGIKSLALRGAETIVKVTQDKTFTQSMCSPLNDYADELAASTGSNVRVIASYVLPAVVSDADVEALMRNLTALPEHVDISVGCVYYDVCTRMIAASKAHGYAPDAMLHSICVDNGNFLADTGPAAAGTFGAVNWHEDMQLTGDVTGWSAKQYADLYRANYSATPPYQSAAYFAGGLALLRAIEDAGTFSDSDEVAFALSRLDIDTFFGTINFNSVNQN-SNDFSYVQYDENAELQIVIPDAVATGPLIHP 1161
            +G++  G  V+  G    +   G   R   + W+ WVNE++GGI+VGDQ + AE+ Y +D   +     +T+ LI+E+G  F+  PYS+ LT   + +AE   ++ + GS +S +++    + LF   T + +   + I++LA RGA T V   +D  F  ++      + +       + + V+A    P  + D  V ALM     L    D+ +G  +Y+     + ++   G+ P  ML ++   N   + + G    G  G   W   M   G   G SA  Y+  Y++ +   P YQ+A+  A  LAL  AIE AG+ +D+  V  AL  L  DTF+G I+F+    N S     +Q  ++ E+ +V PDA AT  L +P
Sbjct:   36 DGTVRIGATVSETGK---FSMEGKDTRQGYDTWLTWVNEVYGGIRVGDQRYRAEIVYHDDESDADTAGRLTQRLIDEDGVDFLLGPYSSGLTTGTSAIAEASNVLMVEGSGASDALFERGFQNLFFVATIASDYTGSSIEALAARGARTAVVAHEDTLFATAVAQGAVRHLE------ANGIEVLAVEAYPEGIQD--VSALMTKSRDLDP--DVFIGGGHYNDAVLFVNSATEVGFEPGGMLITVGPSNPRLVEELGSDVDGVLGPTQWEPSMAYEGPYFG-SAADYSAYYQSLWGEAPVYQAASATAAALALHLAIEAAGS-TDTGAVRAALRALSADTFYGPISFDERGVNVSKPMGTIQV-QDGEIVVVAPDAAATAALQYP 405          
BLAST of mRNA_H-akashiwo_Contig1140.3.1 vs. uniprot
Match: A0A6N8W2V4_9CHLR (ABC transporter substrate-binding protein n=3 Tax=unclassified Caldilineaceae TaxID=1919254 RepID=A0A6N8W2V4_9CHLR)

HSP 1 Score: 150 bits (379), Expect = 9.880e-38
Identity = 113/374 (30.21%), Postives = 177/374 (47.33%), Query Frame = 1
Query:   64 YLKMGPMIRNTLEMWVWWVNEIHGGIKVGDQTFNAEVKYVNDWHSSAHVTNITKYLIEEEGAQFMFAPYSTTLTKPAAVVAEDHKIITIAGSASSTSIYTDK-KYLFTPLTSSGELMTAGIKSLALRGAETIVKVTQDKTFTQSMCSPLNDYADELAASTGSNVRVIASYVLPAVVSDADVEALMRNLTALPEHVDISVGCVYYDVCTRMIAASKAHGYAPDAMLHSICVDNGNFLADTGPAAAGTFGAVNWHEDMQLTGDVTGWSAKQYADLYRANYSATPPYQSAAYFAGGLALLRAIEDAGTFSDSDEVAFALSRLDIDTFFGTINFNSVNQNSNDFSYVQYDENAELQIVIPDAVATGPLIHPMPSWSDR 1182
            + + G   R    +W+ WVN+ +GGIKVGD  +  E+   +D         + + LI E+   F+  PYS+ LT+ A+ +AE +  I I G+ ++  ++    + LF  LT +G    + ++ LA +GA+T+V   +D  F  S+ +     A   AA  G  V  + +Y     V+ ADV  +M     L    DI VG  +++     I A+K   + P AM+ ++   N   + + G       G   W   M    D  G +A +YA  Y   +   P YQ+A   A  LAL  AIE A +  D+D V  AL  LD+ TF+G INF+   +N+         ++ E+ +V P   A   L +P P W DR
Sbjct:   57 FSREGKDTRQGYGLWLDWVNDEYGGIKVGDDRYKVELIMYDDEGDPDTAARLVEKLINEDRVDFLLGPYSSFLTQSASAIAEKYDKIMIEGNGAAEPLFERGFQNLFAVLTPAGNYTRSALQLLAGKGAQTVVIAYEDTAFPTSVANG----AQHWAAEYGLEVLGVETYP----VNVADVSGIMSKFKDLDP--DIFVGGGHFNDAVLFIRAAKELDFNPKAMVITVGPSNPKLIEEVGVDTEYVIGPTQWEASMSYADDYFG-TAAEYAARYEDLWGEPPTYQAAESTATALALHIAIEQAASL-DTDAVRAALRSLDVVTFYGPINFDEKGRNAGKPMGAIQIQDGEILVVAPSNAAVAELNYPAPPWKDR 418          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1140.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XLH9_HETAK3.330e-8589.47Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2V0E4_9STRA1.020e-7748.33Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
A0A3M2A479_9CHLR2.170e-4732.06Branched-chain amino acid ABC transporter substrat... [more]
A0A6B1ECU5_9ACTN1.110e-4331.17ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A3M1Z524_9CHLR2.670e-4230.59Branched-chain amino acid ABC transporter substrat... [more]
A0A3M1HL89_9CHLR4.120e-4230.67Branched-chain amino acid ABC transporter substrat... [more]
A0A6N9EMY0_9ACTN7.110e-4131.09ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A6N7GFQ4_9ACTN6.560e-4028.83ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A7K2DH66_9ACTN1.610e-3929.79ABC transporter substrate-binding protein n=7 Tax=... [more]
A0A6N8W2V4_9CHLR9.880e-3830.21ABC transporter substrate-binding protein n=3 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1140contigH-akashiwo_Contig1140:179401..180585 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1089552.KI911559_gene2276
PFAMsPeripla_BP_6
Model size1185
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K01999
KEGG TC3.A.1.4
KEGG Pathwayko02010,ko02024,map02010,map02024
KEGG ModuleM00237
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.45e-29
EggNOG OGsCOG0683@1|root,COG0683@2|Bacteria,1MWQB@1224|Proteobacteria,2VFEC@28211|Alphaproteobacteria
DescriptionReceptor family ligand binding region
Cds size1185
COG categoryE
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387095.5494037-CDS-H-akashiwo_Contig1140:179400..1805851681387095.5494037-CDS-H-akashiwo_Contig1140:179400..180585Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1140 179401..180585 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1140.3.1prot_H-akashiwo_Contig1140.3.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1140 179401..180585 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1140.3.1

>prot_H-akashiwo_Contig1140.3.1 ID=prot_H-akashiwo_Contig1140.3.1|Name=mRNA_H-akashiwo_Contig1140.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=395bp
ANSNGSITFGLPVTLNGTSATYLKMGPMIRNTLEMWVWWVNEIHGGIKVG
DQTFNAEVKYVNDWHSSAHVTNITKYLIEEEGAQFMFAPYSTTLTKPAAV
VAEDHKIITIAGSASSTSIYTDKKYLFTPLTSSGELMTAGIKSLALRGAE
TIVKVTQDKTFTQSMCSPLNDYADELAASTGSNVRVIASYVLPAVVSDAD
VEALMRNLTALPEHVDISVGCVYYDVCTRMIAASKAHGYAPDAMLHSICV
DNGNFLADTGPAAAGTFGAVNWHEDMQLTGDVTGWSAKQYADLYRANYSA
TPPYQSAAYFAGGLALLRAIEDAGTFSDSDEVAFALSRLDIDTFFGTINF
NSVNQNSNDFSYVQYDENAELQIVIPDAVATGPLIHPMPSWSDRQ
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mRNA from alignment at H-akashiwo_Contig1140:179401..180585+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1140.3.1 ID=mRNA_H-akashiwo_Contig1140.3.1|Name=mRNA_H-akashiwo_Contig1140.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1185bp|location=Sequence derived from alignment at H-akashiwo_Contig1140:179401..180585+ (Heterosigma akashiwo CCMP452)
GCAAACTCGAACGGCAGTATTACATTTGGGCTACCAGTGACACTGAACGG CACAAGCGCGACTTATCTCAAAATGGGCCCAATGATTCGAAACACGTTGG AAATGTGGGTTTGGTGGGTGAACGAGATTCATGGGGGGATAAAAGTCGGG GACCAAACATTCAATGCTGAAGTCAAGTACGTCAATGATTGGCATAGTTC TGCTCACGTGACAAATATTACAAAGTATCTGATTGAAGAAGAAGGGGCCC AGTTTATGTTTGCTCCGTATTCAACAACACTGACTAAACCTGCAGCGGTT GTTGCTGAGGACCACAAAATCATTACCATTGCTGGTTCAGCCTCCTCAAC ATCTATTTACACTGATAAGAAGTACCTTTTTACACCTTTGACGTCTTCTG GCGAGCTCATGACCGCGGGGATAAAATCTCTCGCTCTAAGAGGAGCCGAG ACCATAGTGAAGGTCACCCAGGACAAAACATTCACTCAGTCCATGTGCTC CCCCCTCAATGACTACGCCGACGAGCTGGCGGCCTCGACCgGGTCCAACG TGAGGGTGATTGCTTCTTATGTCTTGCCTGCGGTGGTCTCTGATGCCGAC GTGGAGGCCCTGATGCGCAACCTCACGGCGCTGCCGGAGCATGTGGACAT CTCCGTCGGCTGTGTGTACTACGACGTGTGCACTCGCATGATTGCGGCGT CTAAGGCCCATGGCTACGCACCGGACGCGATGCTCCACAGCATCTGTGTG GACAATGGCAACTTCCTGGCGGACACGGGGCCGGCGGCGGCCGGTACATT CGGGGCCGTGAACTGGCACGAGGACATGCAGCTAACCGGCGACGTCACCg GGTGGTCCGCGaaGCAGTACGCAGACCTTTACCGAGCAAACTACTCCGCC ACGCCGCCCTACCAAAGTGCGGCATACTTTGCGGGCGGCCTGGCGCTGCT CCGCGCCATTGAGGACGCGGGCACCTTCTCGGACTCGGACGAGGTGGCCT TTGCGCTCTCCCGGCTCGACATCGACACCTTCTTCGGGACGATCAACTTC AACTCCGTCAACCAGAACAGCAACGATTTCTCCTACGTCCAGTACGACGA GAACGCGGAGCTGCAGATCGTGATCCCAGACGCCGTGGCCACGGGGCCGC TGATCCACCCAATGCCCAGCTGGTCCGACCGCCAG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1140:179401..180585+

>mRNA_H-akashiwo_Contig1140.3.1 ID=mRNA_H-akashiwo_Contig1140.3.1|Name=mRNA_H-akashiwo_Contig1140.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1185bp|location=Sequence derived from alignment at H-akashiwo_Contig1140:179401..180585+ (Heterosigma akashiwo CCMP452)
GCAAACTCGAACGGCAGTATTACATTTGGGCTACCAGTGACACTGAACGG
CACAAGCGCGACTTATCTCAAAATGGGCCCAATGATTCGAAACACGTTGG
AAATGTGGGTTTGGTGGGTGAACGAGATTCATGGGGGGATAAAAGTCGGG
GACCAAACATTCAATGCTGAAGTCAAGTACGTCAATGATTGGCATAGTTC
TGCTCACGTGACAAATATTACAAAGTATCTGATTGAAGAAGAAGGGGCCC
AGTTTATGTTTGCTCCGTATTCAACAACACTGACTAAACCTGCAGCGGTT
GTTGCTGAGGACCACAAAATCATTACCATTGCTGGTTCAGCCTCCTCAAC
ATCTATTTACACTGATAAGAAGTACCTTTTTACACCTTTGACGTCTTCTG
GCGAGCTCATGACCGCGGGGATAAAATCTCTCGCTCTAAGAGGAGCCGAG
ACCATAGTGAAGGTCACCCAGGACAAAACATTCACTCAGTCCATGTGCTC
CCCCCTCAATGACTACGCCGACGAGCTGGCGGCCTCGACCgGGTCCAACG
TGAGGGTGATTGCTTCTTATGTCTTGCCTGCGGTGGTCTCTGATGCCGAC
GTGGAGGCCCTGATGCGCAACCTCACGGCGCTGCCGGAGCATGTGGACAT
CTCCGTCGGCTGTGTGTACTACGACGTGTGCACTCGCATGATTGCGGCGT
CTAAGGCCCATGGCTACGCACCGGACGCGATGCTCCACAGCATCTGTGTG
GACAATGGCAACTTCCTGGCGGACACGGGGCCGGCGGCGGCCGGTACATT
CGGGGCCGTGAACTGGCACGAGGACATGCAGCTAACCGGCGACGTCACCg
GGTGGTCCGCGaaGCAGTACGCAGACCTTTACCGAGCAAACTACTCCGCC
ACGCCGCCCTACCAAAGTGCGGCATACTTTGCGGGCGGCCTGGCGCTGCT
CCGCGCCATTGAGGACGCGGGCACCTTCTCGGACTCGGACGAGGTGGCCT
TTGCGCTCTCCCGGCTCGACATCGACACCTTCTTCGGGACGATCAACTTC
AACTCCGTCAACCAGAACAGCAACGATTTCTCCTACGTCCAGTACGACGA
GAACGCGGAGCTGCAGATCGTGATCCCAGACGCCGTGGCCACGGGGCCGC
TGATCCACCCAATGCCCAGCTGGTCCGACCGCCAG
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