mRNA_H-akashiwo_Contig1131.1.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S1YUJ9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YUJ9_9STRA) HSP 1 Score: 230 bits (586), Expect = 1.610e-70 Identity = 101/160 (63.12%), Postives = 128/160 (80.00%), Query Frame = 1
Query: 10 PSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQFGLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQFQE 489
PSLIVFDLDNT+W PEL++LRRLER+ PVAGKDV LFP +SI++ IR+SP WS T FAVASRT G WA LL QFGL + F +VEIFP +KKAHFENL+ SG+P+ EMLFFDD+RDG++GNC PVS++GVLSVHCP G+ T+E++ ++++ E
Sbjct: 79 PSLIVFDLDNTIWTPELYQLRRLERSGGNPVAGKDVNLFPGARSIIESIRASPDKWSGTSFAVASRTKSGPWAHDLLDQFGLRDFFDHVEIFPGNKKAHFENLKRDSGVPYNEMLFFDDSRDGRFGNCQPVSELGVLSVHCPDGLRTDELFHTAMKRYTE 238
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S3DUA2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DUA2_9STRA) HSP 1 Score: 218 bits (556), Expect = 1.850e-67 Identity = 98/160 (61.25%), Postives = 122/160 (76.25%), Query Frame = 1
Query: 10 PSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQFGLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQFQE 489
P LIV DLDNT+W PEL++LR+L+RA PVA +DV LFP Q ++D+IRS + T+FAVASRT DWA+ LLTQF L E+ +VEIFP +KK HFENL + SGI F++MLFFDD RDGKYGNC PVS MGVLSVHCPGG++T +W LR+++E
Sbjct: 86 PKLIVLDLDNTVWTPELYQLRKLQRANQMPVANRDVKLFPGAQDLIDKIRSGTYFPESTQFAVASRTKSVDWAQDLLTQFDLREILDFVEIFPGNKKQHFENLHQNSGIDFQDMLFFDDARDGKYGNCEPVSTMGVLSVHCPGGLDTSTIWETALRRYEE 245
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S2M521_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M521_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.120e-66 Identity = 99/161 (61.49%), Postives = 116/161 (72.05%), Query Frame = 1
Query: 7 APSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQFGLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQFQE 489
PSLIVFDLDNTLW PEL++LR+L R PVA KDV LFPA + ++ E++ ++ TKFAVASRT DWA LL QF L E Y+EIFP DKK HF NL+ SGI FEEMLFFDD RDGK+GNC PVS MGVLSVHCP GI E +W N + Q++E
Sbjct: 17 VPSLIVFDLDNTLWTPELYQLRKLARNNQLPVAHKDVKLFPAAKEMIMEMKKD-EKYANTKFAVASRTKSVDWAHDLLNQFELKEWLDYIEIFPGDKKKHFNNLKRSSGIDFEEMLFFDDARDGKFGNCEPVSAMGVLSVHCPNGIYEESIWVNAMSQYKE 176
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S4EPR2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EPR2_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.860e-65 Identity = 99/164 (60.37%), Postives = 125/164 (76.22%), Query Frame = 1
Query: 10 PSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHN----WSKTKFAVASRTNKGDWARSLLTQFGLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQFQE 489
PSLIVFDLDNTLW PEL++LR+L+R PVA KDV L+P V IL +I+ S N ++ TKFA+ASRT G+WA LL QFG+ + F ++EIFP DKK HF NL+++SGI F++MLFFDDNRDGKYGNC PVS +GVLSVHCP GI E VWT L+++++
Sbjct: 50 PSLIVFDLDNTLWTPELYQLRKLQRNNQFPVANKDVKLYPPVLDILRQIQKSGGNNSTLFANTKFAIASRTKSGEWAHDLLDQFGIKDCFDFIEIFPGDKKRHFSNLKKQSGIDFKDMLFFDDNRDGKYGNCEPVSSLGVLSVHCPNGIYEESVWTTALQRYEQ 213
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A448ZRC9_9STRA (CSD domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRC9_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.670e-64 Identity = 100/162 (61.73%), Postives = 121/162 (74.69%), Query Frame = 1
Query: 10 PSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHN--WSKTKFAVASRTNKGDWARSLLTQFGLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQFQE 489
PSLIVFDLDNTLW PEL++LR+L+R PVA +DV LFPA IL + + S N ++ TKFA+ASRT G+WA LL QFG+ E+F YVEIF DKK HF NL+ SGI F +MLFFDDNRDGKYGNC PV+ +GVLSVHCP GI E VWT L++++E
Sbjct: 53 PSLIVFDLDNTLWTPELYQLRKLQRNNQFPVANRDVKLFPAALEILKQXKLSXSNSTFANTKFAIASRTKSGEWAHDLLDQFGIREIFDYVEIFSGDKKRHFXNLKRDSGIDFGDMLFFDDNRDGKYGNCEPVASLGVLSVHCPNGIYEESVWTTALQRYRE 214
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S3VG93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VG93_9STRA) HSP 1 Score: 208 bits (530), Expect = 3.370e-62 Identity = 97/167 (58.08%), Postives = 120/167 (71.86%), Query Frame = 1
Query: 7 APSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHN------WSKTKFAVASRTNKGDWARSLLTQFGLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQFQE 489
PSLIV DLDNTLW PEL++LR+LER K PVA KDV LFPA+QSIL I+ + +S+TKFA+ASRT +WA LL QF L + F YVEIFP DKK HF NL+ +SGI + +MLFFDD+RDG+YGNC PVS++G L+VHCP GI E++W + F E
Sbjct: 102 VPSLIVLDLDNTLWTPELYQLRKLERNKQYPVANKDVKLFPAIQSILSSIKKDLASNGGSSIYSETKFAIASRTKSVEWAHDLLKQFDLTDFFHYVEIFPGDKKRHFANLKSQSGIDYHDMLFFDDSRDGRYGNCEPVSELGALTVHCPNGIYEEKIWHGAIESFGE 268
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S3SEN2_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SEN2_EMIHU) HSP 1 Score: 182 bits (462), Expect = 1.080e-53 Identity = 90/166 (54.22%), Postives = 116/166 (69.88%), Query Frame = 1
Query: 10 PSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQFG--------LDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQF 483
P LIVFDLDNTLW PEL+++ R R K PVAG+DV LFPA + L EI + W T+ AVASRTN+GDWAR+LL F L +L +Y EI+ +K+AHFE+LR +SG+PF MLFFDD R G++GNC PV++MGVLS HCP G+ T+ VW + +R +
Sbjct: 32 PKLIVFDLDNTLWTPELYQVAR--RVKAAPVAGRDVKLFPAAAAALHEIDTCDR-WEGTQIAVASRTNQGDWARTLLDAFEVPGDPSRRLSDLVAYQEIYTGNKRAHFESLRRRSGLPFGSMLFFDDARGGRFGNCEPVARMGVLSAHCPNGL-TDGVWAHAVRSY 193
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S0W2A4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W2A4_9CRYP) HSP 1 Score: 176 bits (445), Expect = 2.210e-53 Identity = 88/167 (52.69%), Postives = 113/167 (67.66%), Query Frame = 1
Query: 10 PSLIVFDLDNTLWEPELFKLRRLERAKIQ----PVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQF-----GLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQF 483
P L+V DLD TLWEPEL++LR L K PVA KDV +F + L E+ ++ W+KT+ AVASRTNKG WA SLL QF LD+LF + EI+ + K HF+ LREK+GI +E+MLFFDD + GK+GNC PV++MG +S HCP G+ T EVW N L +F
Sbjct: 2 PQLVVLDLDATLWEPELYQLRNLPGYKDASGPGPVADKDVAMFDGAVNALAEVATA-ERWAKTQLAVASRTNKGPWAESLLKQFRVAGLSLDDLFVHKEIYSSSKTRHFQALREKTGIEYEDMLFFDDAKGGKWGNCEPVAKMGAMSAHCPDGL-TSEVWRNALEEF 166
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S3WE71_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WE71_EMIHU) HSP 1 Score: 182 bits (462), Expect = 2.870e-52 Identity = 90/166 (54.22%), Postives = 116/166 (69.88%), Query Frame = 1
Query: 10 PSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQFG--------LDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQF 483
P LIVFDLDNTLW PEL+++ R R K PVAG+DV LFPA + L EI + W T+ AVASRTN+GDWAR+LL F L +L +Y EI+ +K+AHFE+LR +SG+PF MLFFDD R G++GNC PV++MGVLS HCP G+ T+ VW + +R +
Sbjct: 32 PKLIVFDLDNTLWTPELYQVAR--RVKAAPVAGRDVKLFPAAAAALHEIDTCDR-WEGTQIAVASRTNQGDWARTLLDAFEVPGDPSRRLSDLVAYQEIYTGNKRAHFESLRRRSGLPFGSMLFFDDARGGRFGNCEPVARMGVLSAHCPNGL-TDGVWAHAVRSY 193
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A8J2WPH3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WPH3_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.890e-51 Identity = 93/170 (54.71%), Postives = 109/170 (64.12%), Query Frame = 1
Query: 1 IVAPSLIVFDLDNTLWEPELFKLRRLERAKIQ----PVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQF-----GLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQF 483
+ P LIVFDLD TLW PEL+KLRRL P+A +DV L+ ++ L+E+ ++ W T A ASRTNKG WAR LL F LD+L Y EIF DK AHF NL +KS I F +MLFFDD RDGKYGNC V+QMGV S HCP GI TE VWTN L +F
Sbjct: 19 VARPKLIVFDLDATLWTPELYKLRRLPNYASAGPPGPMADQDVKLYAGARAALEEL-ATDEAWKDTALACASRTNKGPWARQLLRDFTVAGRSLDDLLEYKEIFTGDKIAHFNNLEQKSEIDFGDMLFFDDARDGKYGNCAKVAQMGVCSAHCPDGITTE-VWTNALAEF 186 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1131.1.1 >prot_H-akashiwo_Contig1131.1.1 ID=prot_H-akashiwo_Contig1131.1.1|Name=mRNA_H-akashiwo_Contig1131.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=163bp IVAPSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDback to top mRNA from alignment at H-akashiwo_Contig1131:26176..26664- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1131.1.1 ID=mRNA_H-akashiwo_Contig1131.1.1|Name=mRNA_H-akashiwo_Contig1131.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=489bp|location=Sequence derived from alignment at H-akashiwo_Contig1131:26176..26664- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1131:26176..26664- >mRNA_H-akashiwo_Contig1131.1.1 ID=mRNA_H-akashiwo_Contig1131.1.1|Name=mRNA_H-akashiwo_Contig1131.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=489bp|location=Sequence derived from alignment at H-akashiwo_Contig1131:26176..26664- (Heterosigma akashiwo CCMP452)back to top |