mRNA_H-akashiwo_Contig1131.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1131.1.1
Unique NamemRNA_H-akashiwo_Contig1131.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S1YUJ9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YUJ9_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.610e-70
Identity = 101/160 (63.12%), Postives = 128/160 (80.00%), Query Frame = 1
Query:   10 PSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQFGLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQFQE 489
            PSLIVFDLDNT+W PEL++LRRLER+   PVAGKDV LFP  +SI++ IR+SP  WS T FAVASRT  G WA  LL QFGL + F +VEIFP +KKAHFENL+  SG+P+ EMLFFDD+RDG++GNC PVS++GVLSVHCP G+ T+E++   ++++ E
Sbjct:   79 PSLIVFDLDNTIWTPELYQLRRLERSGGNPVAGKDVNLFPGARSIIESIRASPDKWSGTSFAVASRTKSGPWAHDLLDQFGLRDFFDHVEIFPGNKKAHFENLKRDSGVPYNEMLFFDDSRDGRFGNCQPVSELGVLSVHCPDGLRTDELFHTAMKRYTE 238          
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S3DUA2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DUA2_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.850e-67
Identity = 98/160 (61.25%), Postives = 122/160 (76.25%), Query Frame = 1
Query:   10 PSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQFGLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQFQE 489
            P LIV DLDNT+W PEL++LR+L+RA   PVA +DV LFP  Q ++D+IRS  +    T+FAVASRT   DWA+ LLTQF L E+  +VEIFP +KK HFENL + SGI F++MLFFDD RDGKYGNC PVS MGVLSVHCPGG++T  +W   LR+++E
Sbjct:   86 PKLIVLDLDNTVWTPELYQLRKLQRANQMPVANRDVKLFPGAQDLIDKIRSGTYFPESTQFAVASRTKSVDWAQDLLTQFDLREILDFVEIFPGNKKQHFENLHQNSGIDFQDMLFFDDARDGKYGNCEPVSTMGVLSVHCPGGLDTSTIWETALRRYEE 245          
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S2M521_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M521_9STRA)

HSP 1 Score: 210 bits (535), Expect = 2.120e-66
Identity = 99/161 (61.49%), Postives = 116/161 (72.05%), Query Frame = 1
Query:    7 APSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQFGLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQFQE 489
             PSLIVFDLDNTLW PEL++LR+L R    PVA KDV LFPA + ++ E++     ++ TKFAVASRT   DWA  LL QF L E   Y+EIFP DKK HF NL+  SGI FEEMLFFDD RDGK+GNC PVS MGVLSVHCP GI  E +W N + Q++E
Sbjct:   17 VPSLIVFDLDNTLWTPELYQLRKLARNNQLPVAHKDVKLFPAAKEMIMEMKKD-EKYANTKFAVASRTKSVDWAHDLLNQFELKEWLDYIEIFPGDKKKHFNNLKRSSGIDFEEMLFFDDARDGKFGNCEPVSAMGVLSVHCPNGIYEESIWVNAMSQYKE 176          
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S4EPR2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EPR2_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.860e-65
Identity = 99/164 (60.37%), Postives = 125/164 (76.22%), Query Frame = 1
Query:   10 PSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHN----WSKTKFAVASRTNKGDWARSLLTQFGLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQFQE 489
            PSLIVFDLDNTLW PEL++LR+L+R    PVA KDV L+P V  IL +I+ S  N    ++ TKFA+ASRT  G+WA  LL QFG+ + F ++EIFP DKK HF NL+++SGI F++MLFFDDNRDGKYGNC PVS +GVLSVHCP GI  E VWT  L+++++
Sbjct:   50 PSLIVFDLDNTLWTPELYQLRKLQRNNQFPVANKDVKLYPPVLDILRQIQKSGGNNSTLFANTKFAIASRTKSGEWAHDLLDQFGIKDCFDFIEIFPGDKKRHFSNLKKQSGIDFKDMLFFDDNRDGKYGNCEPVSSLGVLSVHCPNGIYEESVWTTALQRYEQ 213          
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A448ZRC9_9STRA (CSD domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRC9_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.670e-64
Identity = 100/162 (61.73%), Postives = 121/162 (74.69%), Query Frame = 1
Query:   10 PSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHN--WSKTKFAVASRTNKGDWARSLLTQFGLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQFQE 489
            PSLIVFDLDNTLW PEL++LR+L+R    PVA +DV LFPA   IL + + S  N  ++ TKFA+ASRT  G+WA  LL QFG+ E+F YVEIF  DKK HF NL+  SGI F +MLFFDDNRDGKYGNC PV+ +GVLSVHCP GI  E VWT  L++++E
Sbjct:   53 PSLIVFDLDNTLWTPELYQLRKLQRNNQFPVANRDVKLFPAALEILKQXKLSXSNSTFANTKFAIASRTKSGEWAHDLLDQFGIREIFDYVEIFSGDKKRHFXNLKRDSGIDFGDMLFFDDNRDGKYGNCEPVASLGVLSVHCPNGIYEESVWTTALQRYRE 214          
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S3VG93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VG93_9STRA)

HSP 1 Score: 208 bits (530), Expect = 3.370e-62
Identity = 97/167 (58.08%), Postives = 120/167 (71.86%), Query Frame = 1
Query:    7 APSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHN------WSKTKFAVASRTNKGDWARSLLTQFGLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQFQE 489
             PSLIV DLDNTLW PEL++LR+LER K  PVA KDV LFPA+QSIL  I+    +      +S+TKFA+ASRT   +WA  LL QF L + F YVEIFP DKK HF NL+ +SGI + +MLFFDD+RDG+YGNC PVS++G L+VHCP GI  E++W   +  F E
Sbjct:  102 VPSLIVLDLDNTLWTPELYQLRKLERNKQYPVANKDVKLFPAIQSILSSIKKDLASNGGSSIYSETKFAIASRTKSVEWAHDLLKQFDLTDFFHYVEIFPGDKKRHFANLKSQSGIDYHDMLFFDDSRDGRYGNCEPVSELGALTVHCPNGIYEEKIWHGAIESFGE 268          
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S3SEN2_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SEN2_EMIHU)

HSP 1 Score: 182 bits (462), Expect = 1.080e-53
Identity = 90/166 (54.22%), Postives = 116/166 (69.88%), Query Frame = 1
Query:   10 PSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQFG--------LDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQF 483
            P LIVFDLDNTLW PEL+++ R  R K  PVAG+DV LFPA  + L EI +    W  T+ AVASRTN+GDWAR+LL  F         L +L +Y EI+  +K+AHFE+LR +SG+PF  MLFFDD R G++GNC PV++MGVLS HCP G+ T+ VW + +R +
Sbjct:   32 PKLIVFDLDNTLWTPELYQVAR--RVKAAPVAGRDVKLFPAAAAALHEIDTCDR-WEGTQIAVASRTNQGDWARTLLDAFEVPGDPSRRLSDLVAYQEIYTGNKRAHFESLRRRSGLPFGSMLFFDDARGGRFGNCEPVARMGVLSAHCPNGL-TDGVWAHAVRSY 193          
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S0W2A4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W2A4_9CRYP)

HSP 1 Score: 176 bits (445), Expect = 2.210e-53
Identity = 88/167 (52.69%), Postives = 113/167 (67.66%), Query Frame = 1
Query:   10 PSLIVFDLDNTLWEPELFKLRRLERAKIQ----PVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQF-----GLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQF 483
            P L+V DLD TLWEPEL++LR L   K      PVA KDV +F    + L E+ ++   W+KT+ AVASRTNKG WA SLL QF      LD+LF + EI+ + K  HF+ LREK+GI +E+MLFFDD + GK+GNC PV++MG +S HCP G+ T EVW N L +F
Sbjct:    2 PQLVVLDLDATLWEPELYQLRNLPGYKDASGPGPVADKDVAMFDGAVNALAEVATA-ERWAKTQLAVASRTNKGPWAESLLKQFRVAGLSLDDLFVHKEIYSSSKTRHFQALREKTGIEYEDMLFFDDAKGGKWGNCEPVAKMGAMSAHCPDGL-TSEVWRNALEEF 166          
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A7S3WE71_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WE71_EMIHU)

HSP 1 Score: 182 bits (462), Expect = 2.870e-52
Identity = 90/166 (54.22%), Postives = 116/166 (69.88%), Query Frame = 1
Query:   10 PSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQFG--------LDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQF 483
            P LIVFDLDNTLW PEL+++ R  R K  PVAG+DV LFPA  + L EI +    W  T+ AVASRTN+GDWAR+LL  F         L +L +Y EI+  +K+AHFE+LR +SG+PF  MLFFDD R G++GNC PV++MGVLS HCP G+ T+ VW + +R +
Sbjct:   32 PKLIVFDLDNTLWTPELYQVAR--RVKAAPVAGRDVKLFPAAAAALHEIDTCDR-WEGTQIAVASRTNQGDWARTLLDAFEVPGDPSRRLSDLVAYQEIYTGNKRAHFESLRRRSGLPFGSMLFFDDARGGRFGNCEPVARMGVLSAHCPNGL-TDGVWAHAVRSY 193          
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Match: A0A8J2WPH3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WPH3_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.890e-51
Identity = 93/170 (54.71%), Postives = 109/170 (64.12%), Query Frame = 1
Query:    1 IVAPSLIVFDLDNTLWEPELFKLRRLERAKIQ----PVAGKDVTLFPAVQSILDEIRSSPHNWSKTKFAVASRTNKGDWARSLLTQF-----GLDELFSYVEIFPADKKAHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINTEEVWTNGLRQF 483
            +  P LIVFDLD TLW PEL+KLRRL          P+A +DV L+   ++ L+E+ ++   W  T  A ASRTNKG WAR LL  F      LD+L  Y EIF  DK AHF NL +KS I F +MLFFDD RDGKYGNC  V+QMGV S HCP GI TE VWTN L +F
Sbjct:   19 VARPKLIVFDLDATLWTPELYKLRRLPNYASAGPPGPMADQDVKLYAGARAALEEL-ATDEAWKDTALACASRTNKGPWARQLLRDFTVAGRSLDDLLEYKEIFTGDKIAHFNNLEQKSEIDFGDMLFFDDARDGKYGNCAKVAQMGVCSAHCPDGITTE-VWTNALAEF 186          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1131.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1YUJ9_9STRA1.610e-7063.13Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3DUA2_9STRA1.850e-6761.25Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S2M521_9STRA2.120e-6661.49Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S4EPR2_9STRA1.860e-6560.37Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448ZRC9_9STRA1.670e-6461.73CSD domain-containing protein n=1 Tax=Pseudo-nitzs... [more]
A0A7S3VG93_9STRA3.370e-6258.08Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S3SEN2_EMIHU1.080e-5354.22Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S0W2A4_9CRYP2.210e-5352.69Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S3WE71_EMIHU2.870e-5254.22Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
A0A8J2WPH3_9STRA1.890e-5154.71Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1131contigH-akashiwo_Contig1131:26176..26664 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog44056.XP_009032755.1
PFAMsAcid_PPase
Model size489
Max annot lvl2759|Eukaryota
KEGG koko:K17619
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003993,GO:0004721,GO:0004725,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0030946,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564
Exons1
Evalue2.56e-49
EggNOG OGsKOG4549@1|root,KOG4549@2759|Eukaryota
EC3.1.3.48
Descriptionfructosamine metabolic process
Cds size489
COG categoryO
BRITEko00000,ko01000,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387092.5887346-CDS-H-akashiwo_Contig1131:26175..266641681387092.5887346-CDS-H-akashiwo_Contig1131:26175..26664Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1131 26176..26664 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1131.1.1prot_H-akashiwo_Contig1131.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1131 26176..26664 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1131.1.1

>prot_H-akashiwo_Contig1131.1.1 ID=prot_H-akashiwo_Contig1131.1.1|Name=mRNA_H-akashiwo_Contig1131.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=163bp
IVAPSLIVFDLDNTLWEPELFKLRRLERAKIQPVAGKDVTLFPAVQSILD
EIRSSPHNWSKTKFAVASRTNKGDWARSLLTQFGLDELFSYVEIFPADKK
AHFENLREKSGIPFEEMLFFDDNRDGKYGNCLPVSQMGVLSVHCPGGINT
EEVWTNGLRQFQE
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mRNA from alignment at H-akashiwo_Contig1131:26176..26664-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1131.1.1 ID=mRNA_H-akashiwo_Contig1131.1.1|Name=mRNA_H-akashiwo_Contig1131.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=489bp|location=Sequence derived from alignment at H-akashiwo_Contig1131:26176..26664- (Heterosigma akashiwo CCMP452)
ATCGTCGCTCCATCTCTGATCGTATTCGACTTGGACAACACACTATGGGA ACCTGAGCTTTTCAAACTGCGCAGACTCGAACGCGCAAAAATTCAACCAG TTGCAGGTAAAGATGTCACGCTTTTCCCTGCGGTACAGTCTATTCTGGAC GAGATTCGATCCTCACCACATAATTGGTCGAAAACCAAATTTGCAGTGGC ATCAAGAACGAACAAAGGAGACTGGGCTCGCAGCCTGCTAACTCAGTTTG GTCTTGATGAACTGTTTTCTTACGTAGAAATCTTCCCAGCAGACAAAAAA GCTCATTTTGAGAATCTGCGAGAAAAGAGCGGGATCCCTTTTGAAGAAAT GCTCTTCTTTGATGATAACCGAGATGGTAAATATGGAAACTGCCTGCCTG TTAGCCAGATGGGTGTTTTATCTGTGCATTGCCCGGGAGGGATCAACACT GAGGAAGTGTGGACCAATGGCCTTCGCCAATTTCAAGAG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1131:26176..26664-

>mRNA_H-akashiwo_Contig1131.1.1 ID=mRNA_H-akashiwo_Contig1131.1.1|Name=mRNA_H-akashiwo_Contig1131.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=489bp|location=Sequence derived from alignment at H-akashiwo_Contig1131:26176..26664- (Heterosigma akashiwo CCMP452)
ATCGTCGCTCCATCTCTGATCGTATTCGACTTGGACAACACACTATGGGA
ACCTGAGCTTTTCAAACTGCGCAGACTCGAACGCGCAAAAATTCAACCAG
TTGCAGGTAAAGATGTCACGCTTTTCCCTGCGGTACAGTCTATTCTGGAC
GAGATTCGATCCTCACCACATAATTGGTCGAAAACCAAATTTGCAGTGGC
ATCAAGAACGAACAAAGGAGACTGGGCTCGCAGCCTGCTAACTCAGTTTG
GTCTTGATGAACTGTTTTCTTACGTAGAAATCTTCCCAGCAGACAAAAAA
GCTCATTTTGAGAATCTGCGAGAAAAGAGCGGGATCCCTTTTGAAGAAAT
GCTCTTCTTTGATGATAACCGAGATGGTAAATATGGAAACTGCCTGCCTG
TTAGCCAGATGGGTGTTTTATCTGTGCATTGCCCGGGAGGGATCAACACT
GAGGAAGTGTGGACCAATGGCCTTCGCCAATTTCAAGAG
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