mRNA_H-akashiwo_Contig1130.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1130.3.1 vs. uniprot
Match: A0A7S3Y6J5_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J5_HETAK) HSP 1 Score: 286 bits (732), Expect = 2.750e-95 Identity = 139/150 (92.67%), Postives = 143/150 (95.33%), Query Frame = 1
Query: 1 MITSLYVPGVSDKLRRQLKGYNVDLVLKMGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKQHWGTRKGEHQGYVRRGEASKSGVANHAVNMLHYPDWEKLHVVAKESNAYRRRMMESILIQARTGRDNIMPGTMNVDNNY 450
+ITSLYVPGVSDKLRRQLKGYNVDLV K GQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETK+HWGTRKGEHQGYVRRGEASKSGVANHAVNMLH+PDWEK HVVAKE N YRRRMMESILIQARTG D+ MPGTMNVDNNY
Sbjct: 138 VITSLYVPGVSDKLRRQLKGYNVDLVFKRGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKRHWGTRKGEHQGYVRRGEASKSGVANHAVNMLHHPDWEKSHVVAKEGNTYRRRMMESILIQARTGGDDRMPGTMNVDNNY 287
BLAST of mRNA_H-akashiwo_Contig1130.3.1 vs. uniprot
Match: A0A7S4DDA1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDA1_HETAK) HSP 1 Score: 286 bits (732), Expect = 3.440e-91 Identity = 139/150 (92.67%), Postives = 143/150 (95.33%), Query Frame = 1
Query: 1 MITSLYVPGVSDKLRRQLKGYNVDLVLKMGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKQHWGTRKGEHQGYVRRGEASKSGVANHAVNMLHYPDWEKLHVVAKESNAYRRRMMESILIQARTGRDNIMPGTMNVDNNY 450
+ITSLYVPGVSDKLRRQLKGYNVDLV K GQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETK+HWGTRKGEHQGYVRRGEASKSGVANHAVNMLH+PDWEK HVVAKE N YRRRMMESILIQARTG D+ MPGTMNVDNNY
Sbjct: 472 VITSLYVPGVSDKLRRQLKGYNVDLVFKRGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKRHWGTRKGEHQGYVRRGEASKSGVANHAVNMLHHPDWEKSHVVAKEGNTYRRRMMESILIQARTGGDDRMPGTMNVDNNY 621
BLAST of mRNA_H-akashiwo_Contig1130.3.1 vs. uniprot
Match: A0A7S3XRK9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRK9_HETAK) HSP 1 Score: 146 bits (368), Expect = 1.080e-40 Identity = 69/86 (80.23%), Postives = 76/86 (88.37%), Query Frame = 1
Query: 1 MITSLYVPGVSDKLRRQLKGYNVDLVLKMGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKQHWGTRKGEHQGYVRR 258
++TSLYVPGVS+KLR QLK VDLV K GQTLGS+I NVKEKRT ERQKGVIYKIPC+HC+ECYIGET +HWGTRK EHQGYVRR
Sbjct: 186 VVTSLYVPGVSEKLRWQLKKLGVDLVFKRGQTLGSMICNVKEKRTAERQKGVIYKIPCQHCQECYIGETCRHWGTRKAEHQGYVRR 271
BLAST of mRNA_H-akashiwo_Contig1130.3.1 vs. uniprot
Match: UPI0019399234 (uncharacterized protein LOC120341251 n=2 Tax=Styela clava TaxID=7725 RepID=UPI0019399234) HSP 1 Score: 95.5 bits (236), Expect = 5.590e-22 Identity = 47/122 (38.52%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 16 YVPGVSDKLRRQLKGYNVDLVLKMGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKQHWGTRKGEHQGYVRRGEASKSGVANHAVNMLHYPDWEKLHVVAKESNAYRRRMMES 381
YV G+S+K+RR L+ + + K T+G L+SNVK++ P ++ GV+Y IPC C YIGETK+ TR+ EHQ V++ + KS ++ HA++ H DW+ ++ E + +R +ES
Sbjct: 25 YVKGLSEKIRRILEDVRIKVSFKPQNTIGQLLSNVKDRPCPNKKNGVVYAIPCVDCCSIYIGETKRSLETRRKEHQRDVKQKKFEKSALSKHALSTDHSIDWDNSRILEHEIHYRKRLFLES 146
BLAST of mRNA_H-akashiwo_Contig1130.3.1 vs. uniprot
Match: UPI00193A372E (uncharacterized protein LOC120347973 n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A372E) HSP 1 Score: 97.1 bits (240), Expect = 1.400e-20 Identity = 48/122 (39.34%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 16 YVPGVSDKLRRQLKGYNVDLVLKMGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKQHWGTRKGEHQGYVRRGEASKSGVANHAVNMLHYPDWEKLHVVAKESNAYRRRMMES 381
YV G+S+K+RR L+ + + K T+G L+SNVKE+ P ++ GV+Y IPC C YIGETK+ TR+ EHQ V++ + KS ++ HA++ H DW+ ++ E + +R +ES
Sbjct: 470 YVKGLSEKIRRILEDVRIKVSFKPQNTIGQLLSNVKERPCPNKKNGVVYAIPCVECCSIYIGETKRSLETRRKEHQRDVKQKKFEKSALSKHALSTDHSIDWDNSRILEHEIHYRKRLFLES 591
BLAST of mRNA_H-akashiwo_Contig1130.3.1 vs. uniprot
Match: A0A3L8D673_OOCBI (Uncharacterized protein n=2 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A3L8D673_OOCBI) HSP 1 Score: 95.5 bits (236), Expect = 1.680e-20 Identity = 45/145 (31.03%), Postives = 82/145 (56.55%), Query Frame = 1
Query: 16 YVPGVSDKLRRQLKGYNVDLVLKMGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKQHWGTRKGEHQGYVRRGEASKSGVANHAVNMLHYPDWEKLHVVAKESNAYRRRMMESILIQARTGRDNIMPGTMNVDNNY 450
+V G+SD L R K YN++++ + + L +I + K+ + GV+Y++ CK C+ CY+G+TK+H TR EH+ + + E + S V+ H ++ H DW K+ ++ +E + ++R + E I I+ N+ T N+ Y
Sbjct: 213 FVNGLSDILHRVFKSYNINVIHTINKRLDCIIKSGKDALPDSNKTGVVYRLKCKDCDACYVGQTKRHLATRVKEHRSDISKREGNWSVVSRHRASLFHDFDWSKVDILHQEQHLHKREVAEMIFIKRHHNAINLQTDTDNLPGVY 357
BLAST of mRNA_H-akashiwo_Contig1130.3.1 vs. uniprot
Match: A0A3L8E3Q1_OOCBI (GIY-YIG domain-containing protein n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A3L8E3Q1_OOCBI) HSP 1 Score: 91.3 bits (225), Expect = 2.410e-20 Identity = 44/145 (30.34%), Postives = 80/145 (55.17%), Query Frame = 1
Query: 16 YVPGVSDKLRRQLKGYNVDLVLKMGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKQHWGTRKGEHQGYVRRGEASKSGVANHAVNMLHYPDWEKLHVVAKESNAYRRRMMESILIQARTGRDNIMPGTMNVDNNY 450
+V G+SD L R K YN++++ + + L +I + K+ + GV+Y++ CK C+ CY+G+TK+H TR EH+ + + E + S V+ H ++ H DW K+ ++ +E ++ + E I I+ N+ T N+ Y
Sbjct: 21 FVNGLSDILHRVFKSYNINVIHTINKRLDCIIKSGKDALPDSNKTGVVYRLKCKDCDACYVGQTKRHLATRVKEHRSDISKREGNWSVVSRHRASLFHDFDWSKVDILHQEQYLHKCEVAEMIFIKRHHNAINLQTDTDNLPGVY 165
BLAST of mRNA_H-akashiwo_Contig1130.3.1 vs. uniprot
Match: UPI0019399E44 (uncharacterized protein LOC120331363 n=1 Tax=Styela clava TaxID=7725 RepID=UPI0019399E44) HSP 1 Score: 89.4 bits (220), Expect = 1.630e-18 Identity = 44/121 (36.36%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 16 YVPGVSDKLRRQLKGYNVDLVLKMGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKQHWGTRKGEHQGYVRRGEASKSGVANHAVNMLHYPDWEKLHVVAKESNAYRRRMME 378
YV G+ +K+RR L+ + + K T+G L+SNVK++ P ++ GV+Y IPC C +IGETK+ T + EHQ V++ + KS ++ HA++ H DW+ ++ E + YR+R+++
Sbjct: 167 YVKGLGEKIRRILEDVRIKVSFKPQNTIGQLLSNVKDRPCPNKKNGVVYAIPCVDCCSIHIGETKRSLETGRKEHQRDVKQKKFEKSALSKHALSTDHSIDWDNSRILEHEIH-YRKRLLK 286
BLAST of mRNA_H-akashiwo_Contig1130.3.1 vs. uniprot
Match: A0A3L8D4B1_OOCBI (Uncharacterized protein n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A3L8D4B1_OOCBI) HSP 1 Score: 84.3 bits (207), Expect = 3.790e-16 Identity = 46/145 (31.72%), Postives = 80/145 (55.17%), Query Frame = 1
Query: 16 YVPGVSDKLRRQLKGYNVDLVLKMGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKQHWGTRKGEHQGYVRRGEASKSGVANHAVNMLHYPDWEKLHVVAKESNAYRRRMMESILIQARTGRDNIMPGTMNVDNNY 450
YV G S+ + R L+G V++ + +TL ++ K+K + + VIY+I CK C+ CY+G+TK+H TR EH +++ E + S V+ H N+ H DW ++ V+ +E + +R + E I+ N+ T N+ + Y
Sbjct: 412 YVKGFSECVARILRGCQVNVTHVINKTLDGIVKCEKDKLERKNKTDVIYRINCKDCDVCYVGQTKRHLNTRISEHLSDIKKCENNWSVVSKHRDNVDHEFDWSEVEVLHQEKHLRKRLIAEMFYIKKHKTSINLQKDTDNLSDMY 556
BLAST of mRNA_H-akashiwo_Contig1130.3.1 vs. uniprot
Match: UPI001D077B58 (uncharacterized protein LOC123308587 n=1 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D077B58) HSP 1 Score: 79.7 bits (195), Expect = 1.960e-15 Identity = 39/127 (30.71%), Postives = 76/127 (59.84%), Query Frame = 1
Query: 13 LYVPGVSDKLRRQLKGYNVDLVLKMGQTLGSLISNVKEKRTPERQKGVIYKIPCKHCEECYIGETKQHWGTRKGEHQGYVRRGEASKSGVANHAVNMLHYPDWEKLHVVAKESNAYRRRMMESILIQ 393
+YVP +S++L+R +K ++ +T+ S+ S +K++ ER GV+YKI C+ C CY+G+T Q+ G R +H+ + + S + ++ HA + H D++ + ++ +E+N ++R E I I+
Sbjct: 72 IYVPRLSEQLKRLMKDSTNRVIYYYNKTVRSIFSKLKDRDPKERCSGVVYKINCRDCSVCYVGQTGQYLGNRSAQHERDCKNKKES-TALSAHASSSNHNFDFQNVEILGRENNWFKRCFKEMIYIK 197 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1130.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1130.3.1 >prot_H-akashiwo_Contig1130.3.1 ID=prot_H-akashiwo_Contig1130.3.1|Name=mRNA_H-akashiwo_Contig1130.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=150bp MITSLYVPGVSDKLRRQLKGYNVDLVLKMGQTLGSLISNVKEKRTPERQKback to top mRNA from alignment at H-akashiwo_Contig1130:153661..154110+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1130.3.1 ID=mRNA_H-akashiwo_Contig1130.3.1|Name=mRNA_H-akashiwo_Contig1130.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=450bp|location=Sequence derived from alignment at H-akashiwo_Contig1130:153661..154110+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1130:153661..154110+ >mRNA_H-akashiwo_Contig1130.3.1 ID=mRNA_H-akashiwo_Contig1130.3.1|Name=mRNA_H-akashiwo_Contig1130.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=450bp|location=Sequence derived from alignment at H-akashiwo_Contig1130:153661..154110+ (Heterosigma akashiwo CCMP452)back to top |