mRNA_H-akashiwo_Contig113.10.1 (mRNA) Heterosigma akashiwo CCMP452
|
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig113.10.1 vs. uniprot
Match: A5JEM1_HETAK (Chloroplast chlorophyll a/c binding protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A5JEM1_HETAK) HSP 1 Score: 416 bits (1069), Expect = 3.370e-145 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1
Query: 1 VVFDLYASTIPSVNQAHKSKMSLKLATFAAALAGASAFVAPNQMGVAKTSSALKMSFENELGVQPPLGFWDPLGLLNDADQQRFDRLRYVEIKHGRISMLAILGHILTTAGARWPGAVDLSGKTYAEIPAGIKALGALPFAGVCQIVAFIGLIELGFSKCQDDVAAFCEGKMDEQGWDEAKKDSKRAIELNNGRAAQMGILALMVHETINND 636
VVFDLYASTIPSVNQAHKSKMSLKLATFAAALAGASAFVAPNQMGVAKTSSALKMSFENELGVQPPLGFWDPLGLLNDADQQRFDRLRYVEIKHGRISMLAILGHILTTAGARWPGAVDLSGKTYAEIPAGIKALGALPFAGVCQIVAFIGLIELGFSKCQDDVAAFCEGKMDEQGWDEAKKDSKRAIELNNGRAAQMGILALMVHETINND
Sbjct: 1 VVFDLYASTIPSVNQAHKSKMSLKLATFAAALAGASAFVAPNQMGVAKTSSALKMSFENELGVQPPLGFWDPLGLLNDADQQRFDRLRYVEIKHGRISMLAILGHILTTAGARWPGAVDLSGKTYAEIPAGIKALGALPFAGVCQIVAFIGLIELGFSKCQDDVAAFCEGKMDEQGWDEAKKDSKRAIELNNGRAAQMGILALMVHETINND 212
BLAST of mRNA_H-akashiwo_Contig113.10.1 vs. uniprot
Match: Q39969_HETAK (Fucoxanthin chlorophyll a /c binding protein n=3 Tax=Sar TaxID=2698737 RepID=Q39969_HETAK) HSP 1 Score: 286 bits (732), Expect = 2.980e-94 Identity = 143/192 (74.48%), Postives = 168/192 (87.50%), Query Frame = 1
Query: 61 MSLKLATFAAALAGASAFVAPNQMGVAKTSSALKMSFENELGVQPPLGFWDPLGLLNDADQQRFDRLRYVEIKHGRISMLAILGHILTTAGARWPGAVDLSGKTYAEIPAGIKALGALPFAGVCQIVAFIGLIELGFSKCQDDVAAFCEGKMDEQGWDEAKKDSKRAIELNNGRAAQMGILALMVHETINND 636
MSLKLAT AAAL GASAFVAPN+MGVAK+SSALKMSFENE+GVQ PLGFWDPLGLL++ADQ+RFDRLR VEIKHGRISMLAILGH++TTAG R PGA DL+G ++ +P G+KAL ALP AGV Q + FIGLIELGF++ ++++ A CE +MD GWD+ KKDSKRAIELNNGRAAQMGILALMVHE ++N+
Sbjct: 1 MSLKLATLAAALMGASAFVAPNKMGVAKSSSALKMSFENEIGVQAPLGFWDPLGLLDEADQERFDRLRTVEIKHGRISMLAILGHLVTTAGVRLPGAYDLAGDQFSSLPTGLKALSALPAAGVAQTIGFIGLIELGFAQIKEELEADCEARMDAAGWDDEKKDSKRAIELNNGRAAQMGILALMVHEQLDNN 192
BLAST of mRNA_H-akashiwo_Contig113.10.1 vs. uniprot
Match: A0A6T1KL06_9DINO (Hypothetical protein n=2 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1KL06_9DINO) HSP 1 Score: 266 bits (679), Expect = 1.840e-86 Identity = 127/175 (72.57%), Postives = 151/175 (86.29%), Query Frame = 1
Query: 112 FVAPNQMGVAKTSSALKMSFENELGVQPPLGFWDPLGLLNDADQQRFDRLRYVEIKHGRISMLAILGHILTTAGARWPGAVDLSGKTYAEIPAGIKALGALPFAGVCQIVAFIGLIELGFSKCQDDVAAFCEGKMDEQGWDEAKKDSKRAIELNNGRAAQMGILALMVHETINND 636
FVAPN MGVAK+SSALKM FENE+GVQPPLGFWDPLGLL +ADQ+RFDRLR VEIKHGRISMLA+LGH++T++G R PG +L+G + +P G+KAL ALPFAGV Q++AFIGL+ELGF + ++D+ A CE MD GWDEAKKDSKRAIELNNGRAAQMGILALMVHE ++N+
Sbjct: 1 FVAPNTMGVAKSSSALKMGFENEIGVQPPLGFWDPLGLLAEADQERFDRLRTVEIKHGRISMLAVLGHLVTSSGVRLPGTYNLAGDEWTSLPTGLKALTALPFAGVAQVIAFIGLVELGFGQIEEDLKAKCEADMDSYGWDEAKKDSKRAIELNNGRAAQMGILALMVHEQLDNN 175
BLAST of mRNA_H-akashiwo_Contig113.10.1 vs. uniprot
Match: A0A7S3XY31_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY31_HETAK) HSP 1 Score: 258 bits (658), Expect = 6.120e-83 Identity = 135/207 (65.22%), Postives = 164/207 (79.23%), Query Frame = 1
Query: 52 KSKMSLKLATFAAALAGASAFVAPNQMGVAKTSSALKMSFENELGVQPPLGFWDPLGLLNDADQQRFDRLRYVEIKHGRISMLAILGHILTTAGARWPGAVDLSGKTYAEIPAGIKALGALPFAGVCQIVAFIGLIELGFSKCQDDVAAFCEGKMDEQGWDEAKKDSKRAIELNNGRAAQMGILALMVHETIN-NDHM*STLSSVPL 669
K KMSLKLATFAAALAGASAFVAPNQMGVAK+SSA+KM FE+E+GVQ PLGFWDPLG+L+ ADQ RFDRLR VEIKHGRI+MLA+LGH++TTAG R+P DL+G YA++P GIKAL LPFAGV Q + FIG IE G+++ + + A C+ KM GW+ D K+AIELNNGRAAQMGIL L VHE I+ N ++ ++L P+
Sbjct: 7 KHKMSLKLATFAAALAGASAFVAPNQMGVAKSSSAVKMGFESEIGVQAPLGFWDPLGMLDGADQARFDRLRTVEIKHGRIAMLAVLGHLVTTAGYRFPFTYDLAGHKYADVPTGIKALTTLPFAGVLQTIVFIGAIEAGYARIKPTLEAECDAKMASLGWN---ADRKKAIELNNGRAAQMGILGLAVHEMIDGNPYVLNSLLGAPV 210
BLAST of mRNA_H-akashiwo_Contig113.10.1 vs. uniprot
Match: A0A7S1UED2_9STRA (Hypothetical protein (Fragment) n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UED2_9STRA) HSP 1 Score: 241 bits (615), Expect = 7.860e-77 Identity = 124/186 (66.67%), Postives = 146/186 (78.49%), Query Frame = 1
Query: 79 TFA--AALAGASAFVAPNQMGVAKTSSALKMSFENELGVQPPLGFWDPLGLLNDADQQRFDRLRYVEIKHGRISMLAILGHILTTAGARWPGAVDLSGKTYAEIPAGIKALGALPFAGVCQIVAFIGLIELGFSKCQDDVAAFCEGKMDEQGWDEAKKDSKRAIELNNGRAAQMGILALMVHETIN 630
TFA A A ASAF AP + A++M FE+E+G QPPLGFWDPLGLLNDADQ+RFDRLR VE KHGRISMLAILGH++TTAG R P A DL+G +YA++P G+ A LP AGV Q VAFIGLIELGF++ ++D+ A CE +MD GWD AKKDSKRAIELNNGRAAQMGILA+MVHE ++
Sbjct: 4 TFAILALAASASAF-APKAFKATRGRQAMRMGFESEIGAQPPLGFWDPLGLLNDADQERFDRLRTVETKHGRISMLAILGHLVTTAGVRLPIAYDLAGDSYADVPTGLAAFSKLPAAGVAQTVAFIGLIELGFAQVKEDIEADCEARMDSAGWDAAKKDSKRAIELNNGRAAQMGILAMMVHEKLD 188
BLAST of mRNA_H-akashiwo_Contig113.10.1 vs. uniprot
Match: A0A7S1XXL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXL0_9STRA) HSP 1 Score: 238 bits (607), Expect = 1.510e-75 Identity = 118/187 (63.10%), Postives = 147/187 (78.61%), Query Frame = 1
Query: 79 TFAA-ALAGASAFVAPNQMGVAKTSSALKMSFENELGVQPPLGFWDPLGLLNDADQQRFDRLRYVEIKHGRISMLAILGHILTTAGARWPGAVDLSGKTYAEIPAGIKALGALPFAGVCQIVAFIGLIELGFSKCQDDVAAFCEGKMDEQGWDEAKKDSKRAIELNNGRAAQMGILALMVHETINND 636
TFA ALA +++ AP + SA++M FE+E+G QPPLGFWDPLGLLNDADQ+RFDRLR VE KHGRISMLAILGH++TTAG R PG +D G +A+IP+GI A +P AG+ Q++ F+GLIE GF + +D++ A CE KMDEQG+D A KDSKRAIELNNGRAAQMGILA+MVHE ++N+
Sbjct: 4 TFAVLALAASASAFAPKAFKATRGRSAMRMGFESEIGAQPPLGFWDPLGLLNDADQERFDRLRTVETKHGRISMLAILGHLVTTAGVRIPGDIDFHGTAFADIPSGIAAFNKIPDAGLIQLIGFVGLIEAGFLQVKDEIEAGCEAKMDEQGFDAAMKDSKRAIELNNGRAAQMGILAMMVHEKLDNN 190
BLAST of mRNA_H-akashiwo_Contig113.10.1 vs. uniprot
Match: A0A7S1XV63_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XV63_9STRA) HSP 1 Score: 236 bits (601), Expect = 1.040e-74 Identity = 118/181 (65.19%), Postives = 140/181 (77.35%), Query Frame = 1
Query: 88 AALAGASAFVAPNQMGVAKTSSALKMSFENELGVQPPLGFWDPLGLLNDADQQRFDRLRYVEIKHGRISMLAILGHILTTAGARWPGAVDLSGKTYAEIPAGIKALGALPFAGVCQIVAFIGLIELGFSKCQDDVAAFCEGKMDEQGWDEAKKDSKRAIELNNGRAAQMGILALMVHETIN 630
A +A ASAF AP + A++M FE+E+G QPPLGFWDPLGLL DADQ RFDRLRYVE+KHGRISMLAILGH++TTAGAR P DLSG ++A++P GI A LP +G QIV FIG +ELGF + QD++ CE +MD QGW AKKDSKRAIELNNGRAAQMGILA+MVHE ++
Sbjct: 9 ALVASASAF-APKAFKATRGRQAMRMGFESEIGAQPPLGFWDPLGLLKDADQDRFDRLRYVEVKHGRISMLAILGHLVTTAGARLPFNYDLSGDSFADVPTGIAAFSKLPLSGTLQIVFFIGALELGFLQVQDEIEDDCEARMDSQGWGAAKKDSKRAIELNNGRAAQMGILAMMVHEKLD 188
BLAST of mRNA_H-akashiwo_Contig113.10.1 vs. uniprot
Match: A0A6T1L6B2_9DINO (Hypothetical protein n=3 Tax=Sar TaxID=2698737 RepID=A0A6T1L6B2_9DINO) HSP 1 Score: 235 bits (599), Expect = 5.440e-74 Identity = 119/205 (58.05%), Postives = 152/205 (74.15%), Query Frame = 1
Query: 61 MSLKLATFAAALAGASAFVAPNQM-GVAKTSSALKMSFENELGVQPPLGFWDPLGLLNDADQQRFDRLRYVEIKHGRISMLAILGHILTTAGARWPGAVDLSGKTYAEIPAGIKALGALPFAGVCQIVAFIGLIELGFSKCQDDVAAFCEGKMDEQGWDEAKKDSKRAIELNNGRAAQMGILALMVHETIN-NDHM*STLSSVPL 669
MSLK+AT AAAL GA+AF N M VAK+SSALKM FE E+G QPPLGFWDPL +L +RF LR E+KHGR++ LA+LGHILTTAGARWPG DL+G T++ +P G+KA LP G+ QI FIG++E+G+S +D++AA CE +M + GW +AKKDSKRAIELNNGRAA MGI L+ HE I+ N ++ ++L P+
Sbjct: 7 MSLKIATIAAALTGAAAFAPSNGMKNVAKSSSALKMGFEKEIGAQPPLGFWDPLKILEGESAERFAELREYEVKHGRVAQLAVLGHILTTAGARWPGTYDLAGHTWSSVPTGLKAFSTLPAGGLAQIFLFIGVMEMGYSVRKDEIAANCEERMTKAGWSDAKKDSKRAIELNNGRAAMMGIWGLVTHELIDGNPYVLNSLLGAPV 211
BLAST of mRNA_H-akashiwo_Contig113.10.1 vs. uniprot
Match: A0A7S3XY30_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY30_HETAK) HSP 1 Score: 210 bits (535), Expect = 1.650e-65 Identity = 106/133 (79.70%), Postives = 118/133 (88.72%), Query Frame = 1
Query: 61 MSLKLATFAAALAGASAFVAPNQMGVAKTSSALKMSFENELGVQPPLGFWDPLGLLNDADQQRFDRLRYVEIKHGRISMLAILGHILTTAGARWPGAVDLSGKTYAEIPAGIKALGALPFAGVCQIVAFIGLI 459
MSLKLATFAAAL GASAFVAPNQMGVAK+SSALKMSFENE+GVQ PLGFWDPLGLLN+ADQ+RFDRLR VEIKHGRISMLAILGH++TTAG R PGA DL+G ++ +P G+KAL ALP AGV Q + FIGLI
Sbjct: 1 MSLKLATFAAALMGASAFVAPNQMGVAKSSSALKMSFENEIGVQAPLGFWDPLGLLNEADQERFDRLRTVEIKHGRISMLAILGHLVTTAGVRLPGAYDLAGDQFSSLPTGLKALSALPAAGVAQTIGFIGLI 133
BLAST of mRNA_H-akashiwo_Contig113.10.1 vs. uniprot
Match: A0A6T1KN37_9DINO (Hypothetical protein n=5 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1KN37_9DINO) HSP 1 Score: 211 bits (536), Expect = 1.360e-63 Identity = 105/171 (61.40%), Postives = 133/171 (77.78%), Query Frame = 1
Query: 133 GVAKT-SSALKMSFE--NELGVQPPLGFWDPLGLLNDADQQRFDRLRYVEIKHGRISMLAILGHILTTAGARWPGAVDLSGKTYAEIPAGIKALGALPFAGVCQIVAFIGLIELGFSKCQDDVAAFCEGKMDEQGWDEAKKDSKRAIELNNGRAAQMGILALMVHETINND 636
GV+++ A + +F+ ELGVQ P+ FWDPLG +D D+ F R R VEIKHGRISMLAILGH++TTAG R PGA DL+G ++ +P G+KAL ALP AGV Q + FIGLIELGF++ ++++ A CE +MD GWD+ KKDSKRAIELNNGRAAQMGILALMVHE ++N+
Sbjct: 94 GVSRSRGKAARTAFDPTTELGVQAPVQFWDPLGFCDDGDEATFKRRRAVEIKHGRISMLAILGHLVTTAGVRLPGAYDLAGDQFSSLPTGLKALSALPAAGVAQTIGFIGLIELGFAQIKEELEADCEARMDAAGWDDEKKDSKRAIELNNGRAAQMGILALMVHEQLDNN 264 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig113.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig113.10.1 >prot_H-akashiwo_Contig113.10.1 ID=prot_H-akashiwo_Contig113.10.1|Name=mRNA_H-akashiwo_Contig113.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=195bp MSLKLATFAAALAGASAFVAPNQMGVAKTSSALKMSFENELGVQPPLGFWback to top mRNA from alignment at H-akashiwo_Contig113:1399964..1400856+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig113.10.1 ID=mRNA_H-akashiwo_Contig113.10.1|Name=mRNA_H-akashiwo_Contig113.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=893bp|location=Sequence derived from alignment at H-akashiwo_Contig113:1399964..1400856+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig113:1399964..1400856+ >mRNA_H-akashiwo_Contig113.10.1 ID=mRNA_H-akashiwo_Contig113.10.1|Name=mRNA_H-akashiwo_Contig113.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=585bp|location=Sequence derived from alignment at H-akashiwo_Contig113:1399964..1400856+ (Heterosigma akashiwo CCMP452)back to top |