mRNA_H-akashiwo_Contig1129.3.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1129.3.1
Unique NamemRNA_H-akashiwo_Contig1129.3.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig1129.3.1 vs. uniprot
Match: A0A7S3XUA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUA8_HETAK)

HSP 1 Score: 174 bits (442), Expect = 1.230e-52
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1 
Query:    1 PASDPNRQYKQSLLHSNPLTAAQNYDFRGTLLGDGVSIALMATLRIIHLATQEEFNDASKAFSGAVSRRNEAASLAGLLGVLRRKVQAFRAS 276
            PASDPNRQYKQSLLHSNPLTAAQNYDFRGTLLGDGVSIALMATLRIIHLATQEEFNDASKAFSGAVSRRNEAASLAGLLGVLRRKVQAFRAS
Sbjct:  113 PASDPNRQYKQSLLHSNPLTAAQNYDFRGTLLGDGVSIALMATLRIIHLATQEEFNDASKAFSGAVSRRNEAASLAGLLGVLRRKVQAFRAS 204
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BLAST of mRNA_H-akashiwo_Contig1129.3.1 vs. uniprot
Match: A0A7S4D6Z7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6Z7_HETAK)

HSP 1 Score: 174 bits (442), Expect = 7.110e-51
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1 
Query:    1 PASDPNRQYKQSLLHSNPLTAAQNYDFRGTLLGDGVSIALMATLRIIHLATQEEFNDASKAFSGAVSRRNEAASLAGLLGVLRRKVQAFRAS 276
            PASDPNRQYKQSLLHSNPLTAAQNYDFRGTLLGDGVSIALMATLRIIHLATQEEFNDASKAFSGAVSRRNEAASLAGLLGVLRRKVQAFRAS
Sbjct:  283 PASDPNRQYKQSLLHSNPLTAAQNYDFRGTLLGDGVSIALMATLRIIHLATQEEFNDASKAFSGAVSRRNEAASLAGLLGVLRRKVQAFRAS 374
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BLAST of mRNA_H-akashiwo_Contig1129.3.1 vs. uniprot
Match: W7TTJ9_9STRA (Histone-lysine n-methyltransferase setd3 isoform a n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTJ9_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 6.480e-19
Identity = 52/90 (57.78%), Postives = 64/90 (71.11%), Query Frame = 1 
Query:    1 PASDPNRQYKQSLLHSNPLTAAQNYDFRGTLLGDGVSIALMATLRIIHLATQEEFNDASKAFSG-AVSRRNEAASLAGLLGVLRRKVQAF 267
            P+  P  ++KQ  L ++ LT  Q YDFRGTLLG+GVS+ALMAT+R+IHLA  EEF D  K F G  VS RNE ASL GL+ +L+ KVQ F
Sbjct:  249 PSDFPLAEWKQEQLLAHDLTKEQPYDFRGTLLGNGVSVALMATIRLIHLAP-EEFEDVEKVFHGEVVSLRNEEASLRGLVRLLQEKVQTF 337
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BLAST of mRNA_H-akashiwo_Contig1129.3.1 vs. uniprot
Match: T0RF77_SAPDV (Protein-histidine N-methyltransferase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RF77_SAPDV)

HSP 1 Score: 74.3 bits (181), Expect = 1.470e-13
Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 1 
Query:    1 PASDPNRQYKQSLLHSNPLTAAQNYDFRGTLLGDGVSIALMATLRIIHLATQEEFNDASKAFSGA-VSRRNEAASLAGLLGVLRRKVQAF 267
            PASDP  + K+SLL ++ LTA+Q YDF GTLLG+GVS  L+ATLRII L  + E    + AF G  ++RRNE A    L+   RRK+Q F
Sbjct:  276 PASDPYYKLKKSLLDASALTASQTYDFEGTLLGNGVSERLLATLRII-LMHETEIVHRNNAFQGRMITRRNELAVYDNLILSCRRKLQTF 364
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BLAST of mRNA_H-akashiwo_Contig1129.3.1 vs. uniprot
Match: D8LD79_ECTSI (Rubis-subs-bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD79_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 1.910e-12
Identity = 47/88 (53.41%), Postives = 59/88 (67.05%), Query Frame = 1 
Query:    1 PASDPNRQYKQSLLHSNPLTAAQNYDFRGTLLGDG-VSIALMATLRIIHLATQEEFNDASKAFSGA-VSRRNEAASLAGLLGVLRRKV 258
            P +DP   +KQ+LL  +PLTAAQ YDF GT+   G +S AL+AT+R+  L T +E   A KAF G  V+ RNEAASL  LL  LRRK+
Sbjct:  295 PQTDPGFAWKQALLDEHPLTAAQAYDFSGTVRAGGWISPALLATVRVAQL-TADERPVAEKAFEGKMVTPRNEAASLGALLAGLRRKL 381
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BLAST of mRNA_H-akashiwo_Contig1129.3.1 vs. uniprot
Match: A0A6H5K0Z8_9PHAE (Rubis-subs-bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Z8_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.510e-10
Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 1 
Query:    1 PASDPNRQYKQSLLHSNPLTAAQNYDFRGTLLGDG-VSIALMATLRIIHLATQEEFNDASKAFSGA-VSRRNEAASLAGLLGVLRRKV 258
            P +DP   +KQ+LL  + LTAAQ YDF GT+   G +S AL+AT+R+  L T +E   A KA  G  V+ RNEAASL  LL  LRRK+
Sbjct:  325 PPTDPGFPWKQALLDEHALTAAQAYDFSGTVRAGGWISPALLATVRVAQL-TADERPVAEKALEGKMVTPRNEAASLGALLAGLRRKL 411
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BLAST of mRNA_H-akashiwo_Contig1129.3.1 vs. uniprot
Match: A0A067CNY1_SAPPC (Rubis-subs-bind domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNY1_SAPPC)

HSP 1 Score: 63.2 bits (152), Expect = 1.320e-9
Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = 1 
Query:    1 PASDPNRQYKQSLLHSNPLTAAQNYDFRGTLLGDGVSIALMATLRIIHLATQE--EFNDASKAFSGAVSRRNEAASLAGLLGVLRRKVQAF 267
            P SD   + K++LL SN LTAAQ YDF GTLLG  VS  L+AT+RII +   E    N+A K  S  +SR NE      L+   R+K+Q++
Sbjct:  308 PRSDRYFRLKKALLDSNALTAAQTYDFEGTLLGHAVSERLLATVRIIRMHETEIDAHNNAFK--SQMISRTNEMLVYDSLIAACRQKLQSY 396
[Close]
BLAST of mRNA_H-akashiwo_Contig1129.3.1 vs. uniprot
Match: A0A1V9ZAD0_9STRA (Rubis-subs-bind domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAD0_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.800e-9
Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 1 
Query:    1 PASDPNRQYKQSLLHSNPLTAAQNYDFRGTLLGDGVSIALMATLRIIHLATQEEFNDASKAF-SGAVSRRNEAASLAGLLGVLRRKVQAF 267
            P SD   + K++LL SN LTAAQ YDF GTLLG  VS  L+AT+RII +  + E +  + AF S  +SR NE      L+   R+K+Q++
Sbjct:  298 PRSDRYFRLKKALLDSNALTAAQTYDFDGTLLGSSVSERLLATVRIIRMH-ETEIDAHNNAFRSQLISRSNEMLVYDSLIAACRQKLQSY 386
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1129.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A7S3XUA8_HETAK1.230e-52100.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4D6Z7_HETAK7.110e-51100.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TTJ9_9STRA6.480e-1957.78Histone-lysine n-methyltransferase setd3 isoform a... [more]
T0RF77_SAPDV1.470e-1352.22Protein-histidine N-methyltransferase n=1 Tax=Sapr... [more]
D8LD79_ECTSI1.910e-1253.41Rubis-subs-bind domain-containing protein n=1 Tax=... [more]
A0A6H5K0Z8_9PHAE1.510e-1051.14Rubis-subs-bind domain-containing protein n=1 Tax=... [more]
A0A067CNY1_SAPPC1.320e-946.15Rubis-subs-bind domain-containing protein n=2 Tax=... [more]
A0A1V9ZAD0_9STRA1.800e-945.56Rubis-subs-bind domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1129contigH-akashiwo_Contig1129:157486..158804 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008618202.1
PFAMsRubis-subs-bind,SET
Model size276
Max annot lvl2759|Eukaryota
KEGG rclassRC01974
KEGG koko:K00592
KEGG ReactionR05179
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.42e-14
EggNOG OGsKOG1337@1|root,KOG1337@2759|Eukaryota
EC2.1.1.127,2.1.1.259
Descriptionpeptidyl-lysine monomethylation
Cds size276
COG categoryI
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387091.14809-CDS-H-akashiwo_Contig1129:157485..1575811681387091.14809-CDS-H-akashiwo_Contig1129:157485..157581Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1129 157486..157581 -
1681387091.1600776-CDS-H-akashiwo_Contig1129:158040..1581201681387091.1600776-CDS-H-akashiwo_Contig1129:158040..158120Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1129 158041..158120 -
1681387091.1763852-CDS-H-akashiwo_Contig1129:158704..1588041681387091.1763852-CDS-H-akashiwo_Contig1129:158704..158804Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1129 158705..158804 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1129.3.1prot_H-akashiwo_Contig1129.3.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1129 157486..158804 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1129.3.1

>prot_H-akashiwo_Contig1129.3.1 ID=prot_H-akashiwo_Contig1129.3.1|Name=mRNA_H-akashiwo_Contig1129.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=92bp
PASDPNRQYKQSLLHSNPLTAAQNYDFRGTLLGDGVSIALMATLRIIHLA
TQEEFNDASKAFSGAVSRRNEAASLAGLLGVLRRKVQAFRAS
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mRNA from alignment at H-akashiwo_Contig1129:157486..158804-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1129.3.1 ID=mRNA_H-akashiwo_Contig1129.3.1|Name=mRNA_H-akashiwo_Contig1129.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1319bp|location=Sequence derived from alignment at H-akashiwo_Contig1129:157486..158804- (Heterosigma akashiwo CCMP452)
CCGGCCTCGGACCCCAACCGGCAGTACAAGCAGAGCCTGCTGCACTCCAA
CCCGCTGACCGCCGCGCAGAACTACGATTTCCGGGGCACCCTGCTCGGGG
GTGAGGCGGGGGGCAAAGCCCTCCTACATTTTCTACGTATAGTATTGCCC
GATGGCCTCATCGCCGCCTTTCAGTTGTCCCTGGCATAGACACTTTGTCC
GGCATTGCACATCTGTTGAGGAGTGCGTCTTGGCGGCAAAGGAGGGGGGG
GGGGGGTCGTTGCGCCTCATTGCCTTCCCCTCGCCAGCCCCATGTGACTC
GGAAATTTCCCATGGCCGAATTCTTCCCGTCAGTGATCAGGGGGGTATTA
ATGCTGTGGTTTATAAGCATATATTATTTATTATGTGCGGCCCTTTCTAT
TTCTAAGGAAAAGGGGAACCAGTACTTCCTCAGCTGCTGTGTAATGCATG
CGCTGCTGCATTTCTTCTTTCTTTGATATACGCACTTATATATTTATATC
TTCAGAAATGGTTCTTTGAATAATCTGCAAGTATAACTTACGCGCACAAA
TATTAATGCCTGCATTTTTATATTTGCCCGCAATAAGCTTTACATGTTGG
CTCTTAGAATTACAACAACCCAAAAAACATAATTTGCTGTGCGGGTGTGT
GTTTCAAATGATTATTGATGCCGGTGTTCTACAGACGGCGTATCTATTGC
GCTTATGGCAACTCTAAGAATCATCCACCTTGCTACCCAAGAAGAATTCA
ATGACGCGTCAAAGGTAATTAATTGCATGCAGTCTTTTTTTTTTCAAATT
CAAGCTCTTCAAAATCTTAACACCCATTTACTACAAATGTACCCTTTTCA
TACTGGGTCCAACTTCTAGCACCACCCCGTATATATGCTTGTTTGGACAC
TTTGCAAATCGGCAGTAGTGGTTCTAGGCCTTCATTCTGCAGATTTGTGT
ATTTCTGCTTCCTGCTGAATGTTTTAGCCAGACTAGAGATAATGAGGCTA
TTTATTACTTCAGCATCTAGGCTCGCGTCAAGGTTGGGTATAGGTGTTTG
CTGACCCACCCGGGCCTGCCCTGTGTGCTTCTTCACACACACACACACAC
GGCAGGGCAGGGCAGGATGAGGACACGCTGATGGTAAATCCGATCTTGCA
ACCACCGAAACAGCACCACCACACATTTTCAATAATAAAAATGAGGGGGG
GCCGCTACCGCCGCCGCATTCAGGCGTTCTCCGGCGCGGTCTCGCGGCGC
AACGAGGCGGCCTCGCTGGCGGGGCTCCTGGGGGTGCTGCGGCGCAAGGT
CCAGGCCTTCCGCGCGTCC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1129:157486..158804-

>mRNA_H-akashiwo_Contig1129.3.1 ID=mRNA_H-akashiwo_Contig1129.3.1|Name=mRNA_H-akashiwo_Contig1129.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=276bp|location=Sequence derived from alignment at H-akashiwo_Contig1129:157486..158804- (Heterosigma akashiwo CCMP452)
CCGGCCTCGGACCCCAACCGGCAGTACAAGCAGAGCCTGCTGCACTCCAA
CCCGCTGACCGCCGCGCAGAACTACGATTTCCGGGGCACCCTGCTCGGGG
ACGGCGTATCTATTGCGCTTATGGCAACTCTAAGAATCATCCACCTTGCT
ACCCAAGAAGAATTCAATGACGCGTCAAAGGCGTTCTCCGGCGCGGTCTC
GCGGCGCAACGAGGCGGCCTCGCTGGCGGGGCTCCTGGGGGTGCTGCGGC
GCAAGGTCCAGGCCTTCCGCGCGTCC
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